Query         043384
Match_columns 149
No_of_seqs    123 out of 2081
Neff          10.9
Searched_HMMs 46136
Date          Fri Mar 29 04:31:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043384.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043384hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0197 Tyrosine kinases [Sign  99.7   1E-18 2.2E-23  124.4   2.2   92    1-108   371-463 (468)
  2 KOG0192 Tyrosine kinase specif  99.7 3.1E-17 6.6E-22  115.7   8.8   92    1-107   211-304 (362)
  3 KOG1026 Nerve growth factor re  99.7 7.2E-19 1.6E-23  131.0   0.5   93    1-109   672-765 (774)
  4 KOG1187 Serine/threonine prote  99.7 3.6E-17 7.8E-22  115.7   8.6  107    1-107   245-353 (361)
  5 KOG4721 Serine/threonine prote  99.7 1.9E-17 4.1E-22  119.9   4.1   90    1-105   278-367 (904)
  6 smart00750 KIND kinase non-cat  99.7 1.9E-16 4.2E-21  101.7   6.9   99    1-106    71-169 (176)
  7 KOG1095 Protein tyrosine kinas  99.7 6.4E-17 1.4E-21  124.3   4.0   91    1-107   871-962 (1025)
  8 PLN00113 leucine-rich repeat r  99.6 9.9E-16 2.1E-20  120.5   8.3  107    1-108   845-953 (968)
  9 KOG0581 Mitogen-activated prot  99.6 6.6E-16 1.4E-20  106.3   6.1   93    1-103   244-336 (364)
 10 PHA02988 hypothetical protein;  99.6 1.9E-16 4.2E-21  108.9   2.8   92    1-107   187-280 (283)
 11 KOG0201 Serine/threonine prote  99.6 7.8E-16 1.7E-20  108.0   4.1   85    1-101   178-262 (467)
 12 KOG4278 Protein tyrosine kinas  99.6 1.1E-15 2.3E-20  112.2   2.9   90    1-106   433-523 (1157)
 13 KOG4257 Focal adhesion tyrosin  99.6 1.3E-15 2.8E-20  111.5   3.2   91    1-107   559-650 (974)
 14 KOG0196 Tyrosine kinase, EPH (  99.6 1.9E-16 4.1E-21  117.9  -1.2   93    1-109   801-894 (996)
 15 KOG1024 Receptor-like protein   99.6 1.2E-15 2.5E-20  106.4   2.2   90    1-106   465-555 (563)
 16 cd05048 PTKc_Ror Catalytic Dom  99.5 3.7E-15   8E-20  102.2   3.0   89    1-105   193-282 (283)
 17 cd05102 PTKc_VEGFR3 Catalytic   99.5 3.4E-15 7.3E-20  105.1   2.6   92    1-107   243-335 (338)
 18 PTZ00284 protein kinase; Provi  99.5   6E-15 1.3E-19  108.0   3.9  104    1-104   312-440 (467)
 19 KOG0582 Ste20-like serine/thre  99.5 1.8E-14 3.8E-19  101.7   5.4   95    1-102   197-293 (516)
 20 KOG0199 ACK and related non-re  99.5 3.1E-15 6.7E-20  110.7   1.3   84    2-101   283-367 (1039)
 21 KOG0200 Fibroblast/platelet-de  99.5 2.4E-14 5.2E-19  107.7   5.9   90    1-105   488-578 (609)
 22 KOG0596 Dual specificity; seri  99.5 1.3E-14 2.7E-19  104.8   3.9   90    1-103   528-628 (677)
 23 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.5   7E-15 1.5E-19  101.0   2.6  105    1-106   177-281 (283)
 24 cd05049 PTKc_Trk Catalytic dom  99.5 1.2E-14 2.7E-19   99.5   3.2   88    1-104   191-279 (280)
 25 PF07714 Pkinase_Tyr:  Protein   99.5 1.4E-15 3.1E-20  103.4  -1.5   87    1-103   172-259 (259)
 26 cd05054 PTKc_VEGFR Catalytic d  99.5 1.1E-14 2.4E-19  102.6   2.9   92    1-107   242-334 (337)
 27 cd05036 PTKc_ALK_LTK Catalytic  99.5 1.1E-14 2.4E-19   99.7   2.6   88    1-104   188-276 (277)
 28 cd05106 PTKc_CSF-1R Catalytic   99.5 1.2E-14 2.5E-19  103.8   2.5   91    1-106   281-372 (374)
 29 cd05094 PTKc_TrkC Catalytic do  99.5 1.1E-14 2.4E-19  100.4   2.1   92    1-108   192-284 (291)
 30 cd05104 PTKc_Kit Catalytic dom  99.5 2.1E-14 4.5E-19  102.6   3.2   90    1-105   283-373 (375)
 31 cd05111 PTK_HER3 Pseudokinase   99.5 1.6E-14 3.5E-19   99.1   2.4   92    1-108   178-270 (279)
 32 cd05116 PTKc_Syk Catalytic dom  99.5 2.1E-14 4.5E-19   97.4   2.5   90    1-106   165-255 (257)
 33 cd07848 STKc_CDKL5 Catalytic d  99.5 5.3E-14 1.2E-18   96.7   4.5  102    1-102   168-284 (287)
 34 KOG0578 p21-activated serine/t  99.5 2.5E-14 5.4E-19  103.1   2.9   88    1-102   436-523 (550)
 35 KOG0198 MEKK and related serin  99.5 2.1E-14 4.7E-19   99.1   2.3   93    1-107   188-281 (313)
 36 cd05035 PTKc_Axl_like Catalyti  99.5 3.8E-14 8.3E-19   96.6   3.5   90    1-106   182-272 (273)
 37 cd05052 PTKc_Abl Catalytic dom  99.5 2.7E-14 5.9E-19   97.1   2.7   90    1-106   172-262 (263)
 38 cd05060 PTKc_Syk_like Catalyti  99.5 2.8E-14 6.1E-19   96.7   2.6   90    1-106   165-255 (257)
 39 cd08228 STKc_Nek6 Catalytic do  99.5 1.3E-13 2.9E-18   93.7   5.9   93    1-106   173-265 (267)
 40 cd06649 PKc_MEK2 Catalytic dom  99.5 3.3E-14 7.3E-19   99.9   2.9   36    1-36    169-204 (331)
 41 cd05093 PTKc_TrkB Catalytic do  99.5 1.8E-14 3.8E-19   99.3   1.5   92    1-108   189-281 (288)
 42 cd05064 PTKc_EphR_A10 Catalyti  99.4 2.8E-14   6E-19   97.3   1.9   89    1-105   175-264 (266)
 43 cd05114 PTKc_Tec_Rlk Catalytic  99.4 4.9E-14 1.1E-18   95.4   3.1   87    1-103   168-255 (256)
 44 cd05072 PTKc_Lyn Catalytic dom  99.4 4.4E-14 9.6E-19   95.9   2.9   89    1-105   171-260 (261)
 45 cd05096 PTKc_DDR1 Catalytic do  99.4 1.5E-13 3.2E-18   95.4   5.5   95    1-104   207-303 (304)
 46 cd05063 PTKc_EphR_A2 Catalytic  99.4 3.7E-14 7.9E-19   96.6   2.4   90    1-106   177-267 (268)
 47 cd05053 PTKc_FGFR Catalytic do  99.4 3.2E-14 6.9E-19   98.1   2.1   90    1-106   201-291 (293)
 48 cd05084 PTKc_Fes Catalytic dom  99.4   4E-14 8.6E-19   95.6   2.3   88    1-104   163-251 (252)
 49 cd05068 PTKc_Frk_like Catalyti  99.4 7.4E-14 1.6E-18   94.8   3.7   89    1-105   171-260 (261)
 50 cd05091 PTKc_Ror2 Catalytic do  99.4   5E-14 1.1E-18   96.7   2.7   89    1-105   193-282 (283)
 51 cd05092 PTKc_TrkA Catalytic do  99.4 4.7E-14   1E-18   96.8   2.6   88    1-104   191-279 (280)
 52 cd05044 PTKc_c-ros Catalytic d  99.4 9.7E-14 2.1E-18   94.5   4.0   88    1-104   180-268 (269)
 53 KOG0667 Dual-specificity tyros  99.4 3.3E-13 7.2E-18   98.7   6.8  103    2-104   356-504 (586)
 54 cd08229 STKc_Nek7 Catalytic do  99.4   2E-13 4.3E-18   92.9   5.1   93    1-106   173-265 (267)
 55 cd06619 PKc_MKK5 Catalytic dom  99.4   4E-13 8.7E-18   92.2   6.6   96    1-104   160-255 (279)
 56 cd05108 PTKc_EGFR Catalytic do  99.4 4.2E-14 9.1E-19   98.7   1.7   92    1-108   178-270 (316)
 57 cd05070 PTKc_Fyn_Yrk Catalytic  99.4   1E-13 2.2E-18   94.1   3.5   89    1-105   170-259 (260)
 58 KOG0575 Polo-like serine/threo  99.4 2.5E-13 5.5E-18   98.8   5.7   86    1-105   185-272 (592)
 59 cd05089 PTKc_Tie1 Catalytic do  99.4 5.4E-14 1.2E-18   97.3   2.2   91    1-107   185-276 (297)
 60 cd05112 PTKc_Itk Catalytic dom  99.4 5.5E-14 1.2E-18   95.1   2.2   88    1-104   168-256 (256)
 61 cd05115 PTKc_Zap-70 Catalytic   99.4 5.4E-14 1.2E-18   95.5   2.1   90    1-106   165-255 (257)
 62 cd05148 PTKc_Srm_Brk Catalytic  99.4 6.8E-14 1.5E-18   94.9   2.6   89    1-105   171-260 (261)
 63 cd05075 PTKc_Axl Catalytic dom  99.4 6.4E-14 1.4E-18   95.5   2.5   90    1-106   181-271 (272)
 64 cd08224 STKc_Nek6_Nek7 Catalyt  99.4 7.1E-13 1.5E-17   90.1   7.5   94    1-107   173-266 (267)
 65 cd05059 PTKc_Tec_like Catalyti  99.4 7.8E-14 1.7E-18   94.5   2.7   87    1-103   168-255 (256)
 66 cd05043 PTK_Ryk Pseudokinase d  99.4 5.5E-14 1.2E-18   96.4   1.8   91    1-107   186-277 (280)
 67 cd05113 PTKc_Btk_Bmx Catalytic  99.4 6.4E-14 1.4E-18   95.0   2.1   88    1-104   168-256 (256)
 68 cd05051 PTKc_DDR Catalytic dom  99.4 3.1E-13 6.7E-18   93.3   5.5   95    1-104   199-295 (296)
 69 cd05047 PTKc_Tie Catalytic dom  99.4 6.3E-14 1.4E-18   95.7   2.0   90    1-106   178-268 (270)
 70 cd05100 PTKc_FGFR3 Catalytic d  99.4 1.7E-13 3.6E-18   96.4   4.1   93    1-109   203-296 (334)
 71 cd05095 PTKc_DDR2 Catalytic do  99.4 2.5E-13 5.5E-18   93.9   5.0   96    1-105   199-296 (296)
 72 cd05045 PTKc_RET Catalytic dom  99.4 5.2E-14 1.1E-18   97.0   1.5   91    1-107   196-287 (290)
 73 cd05097 PTKc_DDR_like Catalyti  99.4 5.1E-13 1.1E-17   92.3   6.4   94    1-104   198-294 (295)
 74 KOG0661 MAPK related serine/th  99.4 8.5E-13 1.8E-17   93.9   7.5  104    2-106   177-295 (538)
 75 KOG2345 Serine/threonine prote  99.4 1.6E-13 3.5E-18   90.5   3.6   92    2-106   206-300 (302)
 76 cd06620 PKc_MAPKK_Byr1_like Ca  99.4 4.8E-13   1E-17   92.0   6.2   97    1-106   169-270 (284)
 77 cd05090 PTKc_Ror1 Catalytic do  99.4 9.3E-14   2E-18   95.4   2.6   89    1-105   193-282 (283)
 78 cd05109 PTKc_HER2 Catalytic do  99.4 8.8E-14 1.9E-18   95.4   2.5   93    1-109   178-271 (279)
 79 cd05062 PTKc_IGF-1R Catalytic   99.4 8.1E-14 1.8E-18   95.4   2.3   88    1-104   188-276 (277)
 80 cd05033 PTKc_EphR Catalytic do  99.4   1E-13 2.2E-18   94.4   2.7   90    1-106   175-265 (266)
 81 cd05082 PTKc_Csk Catalytic dom  99.4 8.9E-14 1.9E-18   94.2   2.4   89    1-105   166-255 (256)
 82 cd05058 PTKc_Met_Ron Catalytic  99.4 6.9E-14 1.5E-18   94.9   1.8   91    1-107   169-260 (262)
 83 cd05050 PTKc_Musk Catalytic do  99.4   1E-13 2.2E-18   95.5   2.5   89    1-105   199-288 (288)
 84 cd05055 PTKc_PDGFR Catalytic d  99.4 1.1E-13 2.4E-18   96.0   2.7   91    1-106   210-301 (302)
 85 cd05105 PTKc_PDGFR_alpha Catal  99.4 1.2E-13 2.5E-18   99.5   2.7   92    1-107   306-398 (400)
 86 PTZ00036 glycogen synthase kin  99.4 1.1E-13 2.3E-18  100.8   2.6  100    1-103   237-352 (440)
 87 cd05077 PTK_Jak1_rpt1 Pseudoki  99.4 2.3E-13   5E-18   92.6   4.1   86    1-104   175-262 (262)
 88 cd05067 PTKc_Lck_Blk Catalytic  99.4 1.6E-13 3.5E-18   93.1   3.2   89    1-105   170-259 (260)
 89 cd05085 PTKc_Fer Catalytic dom  99.4 1.2E-13 2.5E-18   93.2   2.5   88    1-104   161-249 (250)
 90 cd05041 PTKc_Fes_like Catalyti  99.4 1.9E-13 4.1E-18   92.2   3.5   88    1-104   162-250 (251)
 91 cd07862 STKc_CDK6 Catalytic do  99.4 1.1E-13 2.5E-18   95.2   2.5   99    1-102   176-287 (290)
 92 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.4 1.9E-13 4.1E-18   92.7   3.5   86    1-104   171-258 (258)
 93 cd05631 STKc_GRK4 Catalytic do  99.4 4.1E-13   9E-18   92.4   5.0   89    1-102   168-261 (285)
 94 cd05088 PTKc_Tie2 Catalytic do  99.4 1.2E-13 2.6E-18   95.9   2.1   91    1-107   190-281 (303)
 95 cd05038 PTKc_Jak_rpt2 Catalyti  99.4 8.6E-13 1.9E-17   90.4   6.3   97    1-106   179-283 (284)
 96 cd05071 PTKc_Src Catalytic dom  99.4 2.3E-13   5E-18   92.6   3.4   90    1-106   170-260 (262)
 97 cd08529 STKc_FA2-like Catalyti  99.4 9.1E-13   2E-17   89.0   6.2   86    1-102   168-253 (256)
 98 cd06650 PKc_MEK1 Catalytic dom  99.4 6.9E-13 1.5E-17   93.3   5.7   36    1-36    169-204 (333)
 99 cd06640 STKc_MST4 Catalytic do  99.4 5.1E-13 1.1E-17   91.5   4.9   87    1-103   168-254 (277)
100 cd08528 STKc_Nek10 Catalytic d  99.4 2.7E-13 5.8E-18   92.4   3.4   89    1-104   180-268 (269)
101 cd06609 STKc_MST3_like Catalyt  99.4 8.7E-13 1.9E-17   90.2   5.9   87    1-102   165-251 (274)
102 cd06612 STKc_MST1_2 Catalytic   99.4 2.4E-13 5.2E-18   91.8   3.1   88    1-102   166-253 (256)
103 cd05032 PTKc_InsR_like Catalyt  99.4 1.2E-12 2.6E-17   89.5   6.6   88    1-104   188-276 (277)
104 cd05040 PTKc_Ack_like Catalyti  99.4 3.1E-13 6.8E-18   91.4   3.6   89    1-104   167-256 (257)
105 cd05099 PTKc_FGFR4 Catalytic d  99.4 1.4E-13 3.1E-18   95.9   2.0   92    1-108   203-295 (314)
106 cd05069 PTKc_Yes Catalytic dom  99.4 2.5E-13 5.3E-18   92.3   3.0   89    1-105   170-259 (260)
107 cd05101 PTKc_FGFR2 Catalytic d  99.4 1.5E-13 3.2E-18   95.4   1.9   92    1-108   206-298 (304)
108 cd05039 PTKc_Csk_like Catalyti  99.4 2.2E-13 4.9E-18   92.2   2.7   89    1-105   166-255 (256)
109 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.4 7.4E-14 1.6E-18   95.9   0.3   97    1-106   178-283 (284)
110 cd07863 STKc_CDK4 Catalytic do  99.4   3E-13 6.4E-18   93.1   3.1   99    1-102   174-285 (288)
111 PHA02882 putative serine/threo  99.4 6.9E-13 1.5E-17   91.8   5.0   91    1-104   200-294 (294)
112 cd06642 STKc_STK25-YSK1 Cataly  99.4 4.3E-13 9.4E-18   91.8   3.9   86    1-102   168-253 (277)
113 cd06637 STKc_TNIK Catalytic do  99.4 2.6E-13 5.5E-18   92.6   2.7   87    1-102   178-269 (272)
114 cd05098 PTKc_FGFR1 Catalytic d  99.4 1.5E-13 3.3E-18   95.5   1.6   91    1-107   209-300 (307)
115 cd08226 PK_STRAD_beta Pseudoki  99.4 1.8E-12   4E-17   90.9   7.0  100    1-102   175-308 (328)
116 PHA03207 serine/threonine kina  99.4 1.3E-12 2.7E-17   93.9   6.3  102    1-103   254-376 (392)
117 cd05073 PTKc_Hck Catalytic dom  99.4   4E-13 8.7E-18   91.2   3.5   89    1-105   170-259 (260)
118 cd07876 STKc_JNK2 Catalytic do  99.4 2.4E-12 5.2E-17   91.4   7.5  100    1-103   189-316 (359)
119 cd05107 PTKc_PDGFR_beta Cataly  99.4 1.7E-13 3.7E-18   98.7   1.6   91    1-106   308-399 (401)
120 cd00192 PTKc Catalytic domain   99.4 2.2E-12 4.8E-17   87.2   6.9   88    1-104   174-262 (262)
121 cd06636 STKc_MAP4K4_6 Catalyti  99.4   5E-13 1.1E-17   91.7   3.7   87    1-102   188-279 (282)
122 cd07859 STKc_TDY_MAPK_plant Ca  99.4 1.6E-13 3.5E-18   96.4   1.2   97    1-102   173-290 (338)
123 KOG0193 Serine/threonine prote  99.4 2.3E-13 4.9E-18   99.2   1.9   95    1-108   557-655 (678)
124 KOG0194 Protein tyrosine kinas  99.4 4.3E-13 9.4E-18   96.9   3.3   95    1-110   329-424 (474)
125 cd06616 PKc_MKK4 Catalytic dom  99.4 7.9E-13 1.7E-17   91.0   4.5   91    1-102   174-267 (288)
126 KOG1094 Discoidin domain recep  99.4   4E-13 8.6E-18   98.0   3.1   98    1-107   706-805 (807)
127 cd05065 PTKc_EphR_B Catalytic   99.4 2.8E-13   6E-18   92.4   2.2   89    1-105   178-267 (269)
128 PHA03212 serine/threonine kina  99.4 1.5E-12 3.3E-17   93.5   6.0   34    1-34    250-283 (391)
129 cd05074 PTKc_Tyro3 Catalytic d  99.4 2.8E-13 6.2E-18   92.4   2.1   90    1-106   182-272 (273)
130 cd06625 STKc_MEKK3_like Cataly  99.4 4.1E-13 8.8E-18   91.1   2.9   88    1-103   174-261 (263)
131 KOG1025 Epidermal growth facto  99.4 2.9E-13 6.2E-18  102.0   2.2   88    2-105   868-956 (1177)
132 cd05110 PTKc_HER4 Catalytic do  99.3 2.2E-13 4.7E-18   94.6   1.4   91    1-107   178-269 (303)
133 KOG0593 Predicted protein kina  99.3 6.5E-13 1.4E-17   90.1   3.5  100    2-101   169-283 (396)
134 PLN00034 mitogen-activated pro  99.3 1.6E-12 3.5E-17   92.1   5.8   90    1-103   235-329 (353)
135 cd07871 STKc_PCTAIRE3 Catalyti  99.3   3E-13 6.6E-18   93.2   2.0   97    1-102   170-285 (288)
136 cd07868 STKc_CDK8 Catalytic do  99.3   1E-12 2.2E-17   91.7   4.6   36    1-36    182-218 (317)
137 KOG0983 Mitogen-activated prot  99.3 1.2E-12 2.7E-17   87.8   4.7   90    1-103   258-350 (391)
138 cd08219 STKc_Nek3 Catalytic do  99.3 2.6E-13 5.6E-18   91.8   1.5   86    1-102   167-252 (255)
139 KOG4279 Serine/threonine prote  99.3 1.2E-12 2.5E-17   97.6   5.0   88    1-102   743-832 (1226)
140 cd05083 PTKc_Chk Catalytic dom  99.3 5.1E-13 1.1E-17   90.4   2.9   89    1-105   164-253 (254)
141 cd05103 PTKc_VEGFR2 Catalytic   99.3 3.3E-13 7.1E-18   95.3   2.0   92    1-107   248-340 (343)
142 cd05079 PTKc_Jak1_rpt2 Catalyt  99.3 1.8E-12 3.9E-17   89.1   5.6   97    1-106   179-283 (284)
143 cd08227 PK_STRAD_alpha Pseudok  99.3 1.3E-12 2.9E-17   91.6   4.9   36    1-36    175-212 (327)
144 cd06621 PKc_MAPKK_Pek1_like Ca  99.3 4.4E-12 9.5E-17   87.4   7.4   98    1-103   170-267 (287)
145 KOG1989 ARK protein kinase fam  99.3 2.4E-12 5.2E-17   96.8   6.3   92    2-112   223-317 (738)
146 cd08217 STKc_Nek2 Catalytic do  99.3 6.7E-13 1.5E-17   89.9   3.1   86    1-102   177-262 (265)
147 cd08216 PK_STRAD Pseudokinase   99.3 4.7E-12   1E-16   88.2   7.4  101    1-103   175-296 (314)
148 cd07853 STKc_NLK Catalytic dom  99.3 8.4E-13 1.8E-17   94.2   3.7  100    1-102   171-288 (372)
149 cd07875 STKc_JNK1 Catalytic do  99.3 2.3E-12 4.9E-17   91.7   5.8   98    1-103   192-319 (364)
150 cd05066 PTKc_EphR_A Catalytic   99.3 5.4E-13 1.2E-17   90.9   2.4   90    1-106   176-266 (267)
151 cd08220 STKc_Nek8 Catalytic do  99.3 7.9E-13 1.7E-17   89.3   3.1   86    1-102   168-253 (256)
152 cd07874 STKc_JNK3 Catalytic do  99.3 3.6E-12 7.9E-17   90.3   6.6  100    1-103   185-312 (355)
153 cd07867 STKc_CDC2L6 Catalytic   99.3 9.2E-13   2E-17   91.8   3.5   35    1-35    182-217 (317)
154 KOG0671 LAMMER dual specificit  99.3 2.5E-13 5.5E-18   94.2   0.6   98    2-103   277-407 (415)
155 cd07833 STKc_CDKL Catalytic do  99.3 9.8E-13 2.1E-17   90.4   3.4   98    1-102   168-285 (288)
156 PTZ00283 serine/threonine prot  99.3 1.7E-12 3.6E-17   95.9   4.8   86    1-102   212-297 (496)
157 KOG0603 Ribosomal protein S6 k  99.3 1.1E-12 2.4E-17   95.9   3.8   87    1-105   480-566 (612)
158 cd06605 PKc_MAPKK Catalytic do  99.3 4.5E-12 9.7E-17   86.1   6.5   92    1-102   166-257 (265)
159 cd06654 STKc_PAK1 Catalytic do  99.3 4.9E-12 1.1E-16   87.6   6.8   88    1-102   183-270 (296)
160 cd06655 STKc_PAK2 Catalytic do  99.3 1.2E-12 2.5E-17   90.7   3.6   88    1-102   182-269 (296)
161 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.3 1.3E-12 2.9E-17   89.5   3.8   85    1-103   187-273 (274)
162 cd07865 STKc_CDK9 Catalytic do  99.3 8.3E-13 1.8E-17   91.6   2.8  102    1-102   190-307 (310)
163 cd08218 STKc_Nek1 Catalytic do  99.3 1.2E-12 2.6E-17   88.6   3.5   86    1-102   168-253 (256)
164 cd05056 PTKc_FAK Catalytic dom  99.3   1E-12 2.2E-17   89.6   3.1   91    1-107   175-266 (270)
165 cd08223 STKc_Nek4 Catalytic do  99.3 9.8E-13 2.1E-17   89.0   2.9   86    1-102   169-254 (257)
166 cd05034 PTKc_Src_like Catalyti  99.3 8.8E-13 1.9E-17   89.5   2.7   89    1-105   171-260 (261)
167 cd06628 STKc_MAPKKK_Byr2_like   99.3 9.2E-13   2E-17   89.6   2.8   86    1-102   179-264 (267)
168 cd06631 STKc_YSK4 Catalytic do  99.3 2.7E-12   6E-17   87.3   5.1   87    1-101   175-261 (265)
169 cd05057 PTKc_EGFR_like Catalyt  99.3   7E-13 1.5E-17   90.9   2.1   92    1-108   178-270 (279)
170 cd06651 STKc_MEKK3 Catalytic d  99.3 9.6E-13 2.1E-17   89.6   2.6   86    1-102   176-261 (266)
171 cd06615 PKc_MEK Catalytic doma  99.3 1.9E-12 4.1E-17   90.1   4.0  101    1-104   165-289 (308)
172 cd06607 STKc_TAO Catalytic dom  99.3 1.9E-12 4.1E-17   90.0   4.0   88    1-103   178-268 (307)
173 PLN00181 protein SPA1-RELATED;  99.3 1.2E-12 2.6E-17  101.5   3.2   84    1-102   182-265 (793)
174 cd05588 STKc_aPKC Catalytic do  99.3 2.5E-12 5.4E-17   90.4   4.6   92    1-102   163-262 (329)
175 cd05600 STKc_Sid2p_Dbf2p Catal  99.3 1.1E-12 2.4E-17   92.3   2.6   93    1-103   165-258 (333)
176 cd06613 STKc_MAP4K3_like Catal  99.3 8.8E-12 1.9E-16   84.5   6.9   90    1-102   168-260 (262)
177 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.3 2.9E-12 6.4E-17   87.4   4.6   92    1-104   169-268 (269)
178 KOG0591 NIMA (never in mitosis  99.3 1.6E-12 3.4E-17   87.5   3.0   89    1-104   195-283 (375)
179 cd05037 PTK_Jak_rpt1 Pseudokin  99.3 2.3E-12 4.9E-17   87.2   3.9   86    1-104   171-259 (259)
180 PHA03209 serine/threonine kina  99.3 5.6E-12 1.2E-16   89.6   6.1   33    1-33    223-255 (357)
181 cd05630 STKc_GRK6 Catalytic do  99.3 3.1E-12 6.6E-17   88.2   4.6   89    1-102   168-261 (285)
182 cd05061 PTKc_InsR Catalytic do  99.3 1.1E-12 2.4E-17   90.4   2.3   91    1-107   188-279 (288)
183 cd06643 STKc_SLK Catalytic dom  99.3 1.9E-12   4E-17   88.9   3.4   90    1-104   170-264 (282)
184 cd05570 STKc_PKC Catalytic dom  99.3 3.4E-12 7.3E-17   89.3   4.7   85    1-102   163-252 (318)
185 cd07840 STKc_CDK9_like Catalyt  99.3 2.5E-12 5.4E-17   88.2   4.0   99    1-102   168-284 (287)
186 cd06610 STKc_OSR1_SPAK Catalyt  99.3 2.5E-12 5.5E-17   87.3   3.9   91    1-102   173-264 (267)
187 cd05617 STKc_aPKC_zeta Catalyt  99.3 3.3E-12 7.2E-17   89.7   4.6   92    1-102   163-260 (327)
188 cd05607 STKc_GRK7 Catalytic do  99.3 1.7E-12 3.7E-17   89.0   3.1   89    1-101   161-249 (277)
189 cd06638 STKc_myosinIIIA Cataly  99.3 2.3E-12 4.9E-17   88.6   3.6   89    1-103   191-284 (286)
190 cd06646 STKc_MAP4K5 Catalytic   99.3 1.9E-12 4.2E-17   88.1   3.2   91    1-103   173-266 (267)
191 cd07861 STKc_CDK1_euk Catalyti  99.3 7.3E-12 1.6E-16   86.0   6.1   97    1-102   168-282 (285)
192 cd07872 STKc_PCTAIRE2 Catalyti  99.3 8.4E-13 1.8E-17   91.9   1.4   99    1-103   171-287 (309)
193 cd05571 STKc_PKB Catalytic dom  99.3 3.3E-12 7.1E-17   89.5   4.3   85    1-102   162-251 (323)
194 cd05605 STKc_GRK4_like Catalyt  99.3 3.4E-12 7.5E-17   87.9   4.3   89    1-102   168-261 (285)
195 cd05618 STKc_aPKC_iota Catalyt  99.3 4.1E-12 8.9E-17   89.3   4.7   92    1-102   163-262 (329)
196 cd06624 STKc_ASK Catalytic dom  99.3   3E-12 6.6E-17   87.2   3.9   88    1-102   176-265 (268)
197 cd07873 STKc_PCTAIRE1 Catalyti  99.3 1.1E-12 2.5E-17   90.8   1.8   99    1-102   171-286 (301)
198 cd07846 STKc_CDKL2_3 Catalytic  99.3 1.5E-12 3.3E-17   89.4   2.4   97    1-102   167-283 (286)
199 cd06639 STKc_myosinIIIB Cataly  99.3 3.3E-12 7.2E-17   88.1   4.0   88    1-102   195-287 (291)
200 cd06647 STKc_PAK_I Catalytic d  99.3 4.9E-12 1.1E-16   87.5   4.7   89    1-103   182-270 (293)
201 KOG0660 Mitogen-activated prot  99.3 2.9E-12 6.3E-17   88.3   3.5  103    2-104   195-312 (359)
202 cd05118 STKc_CMGC Catalytic do  99.3 2.7E-12 5.8E-17   87.9   3.4   98    1-102   165-280 (283)
203 cd08225 STKc_Nek5 Catalytic do  99.3 6.1E-12 1.3E-16   85.0   5.0   86    1-102   169-254 (257)
204 cd06623 PKc_MAPKK_plant_like C  99.3 6.3E-12 1.4E-16   85.2   5.0   90    1-102   167-256 (264)
205 cd06618 PKc_MKK7 Catalytic dom  99.3 7.2E-12 1.6E-16   86.7   5.3   91    1-104   181-275 (296)
206 cd08221 STKc_Nek9 Catalytic do  99.3 4.8E-12   1E-16   85.6   4.3   87    1-103   168-254 (256)
207 cd07847 STKc_CDKL1_4 Catalytic  99.3 2.3E-12   5E-17   88.4   2.8   99    1-102   167-283 (286)
208 cd07839 STKc_CDK5 Catalytic do  99.3 4.7E-12   1E-16   86.9   4.2  100    1-102   166-281 (284)
209 cd07878 STKc_p38beta_MAPK11 Ca  99.3 1.4E-12 3.1E-17   92.0   1.7   99    1-103   182-299 (343)
210 cd05046 PTK_CCK4 Pseudokinase   99.3   3E-12 6.5E-17   87.5   3.2   89    1-104   185-274 (275)
211 cd05614 STKc_MSK2_N N-terminal  99.3 4.8E-12   1E-16   88.9   4.3   89    1-102   173-267 (332)
212 cd06630 STKc_MEKK1 Catalytic d  99.3 8.2E-12 1.8E-16   85.0   5.3   90    1-102   175-264 (268)
213 cd07835 STKc_CDK1_like Catalyt  99.3 1.5E-11 3.2E-16   84.4   6.6   96    1-102   166-280 (283)
214 cd07860 STKc_CDK2_3 Catalytic   99.3 1.5E-11 3.2E-16   84.4   6.6   96    1-102   167-281 (284)
215 PTZ00267 NIMA-related protein   99.3 1.8E-12 3.8E-17   95.4   2.2   85    1-101   238-322 (478)
216 cd05610 STKc_MASTL Catalytic d  99.3 5.4E-12 1.2E-16   96.2   4.8   89    1-103   547-635 (669)
217 cd06917 STKc_NAK1_like Catalyt  99.3 4.5E-12 9.8E-17   86.7   3.9   87    1-102   168-255 (277)
218 cd07838 STKc_CDK4_6_like Catal  99.3 1.5E-11 3.2E-16   84.4   6.4   99    1-102   173-284 (287)
219 cd05585 STKc_YPK1_like Catalyt  99.3 2.1E-12 4.4E-17   90.1   2.2   85    1-102   160-247 (312)
220 cd05086 PTKc_Aatyk2 Catalytic   99.3 2.6E-11 5.5E-16   82.8   7.5   92    1-104   168-267 (268)
221 cd06606 STKc_MAPKKK Catalytic   99.3 1.4E-11 3.1E-16   83.0   6.2   88    1-102   170-257 (260)
222 cd07869 STKc_PFTAIRE1 Catalyti  99.3 7.2E-12 1.6E-16   87.0   4.8   98    1-102   170-288 (303)
223 cd06644 STKc_STK10_LOK Catalyt  99.3 1.5E-11 3.3E-16   84.9   6.3   88    1-102   177-269 (292)
224 smart00219 TyrKc Tyrosine kina  99.3 1.6E-11 3.5E-16   82.9   6.3   87    1-103   171-258 (258)
225 cd06626 STKc_MEKK4 Catalytic d  99.3 4.9E-12 1.1E-16   85.8   3.6   88    1-101   170-260 (264)
226 cd07850 STKc_JNK Catalytic dom  99.3 1.5E-11 3.3E-16   87.2   6.2   99    1-102   184-311 (353)
227 cd05589 STKc_PKN Catalytic dom  99.3 6.4E-12 1.4E-16   88.1   4.3   85    1-102   168-257 (324)
228 cd06608 STKc_myosinIII_like Ca  99.2 5.9E-12 1.3E-16   85.8   4.0   88    1-102   180-272 (275)
229 cd06622 PKc_MAPKK_PBS2_like Ca  99.2 1.1E-11 2.5E-16   85.1   5.4   89    1-102   168-262 (286)
230 cd05619 STKc_nPKC_theta Cataly  99.2   3E-12 6.5E-17   89.5   2.5   84    1-101   163-247 (316)
231 cd05608 STKc_GRK1 Catalytic do  99.2 6.7E-12 1.4E-16   86.3   4.2   89    1-102   164-257 (280)
232 cd06635 STKc_TAO1 Catalytic do  99.2 5.3E-12 1.1E-16   88.2   3.7   92    1-107   188-282 (317)
233 cd06634 STKc_TAO2 Catalytic do  99.2 4.5E-12 9.8E-17   88.2   3.3   92    1-107   178-272 (308)
234 cd06614 STKc_PAK Catalytic dom  99.2   5E-12 1.1E-16   87.0   3.4   88    1-102   183-270 (286)
235 cd05590 STKc_nPKC_eta Catalyti  99.2   3E-12 6.5E-17   89.7   2.2   85    1-102   163-253 (320)
236 cd06648 STKc_PAK_II Catalytic   99.2   5E-12 1.1E-16   87.1   3.3   88    1-102   182-269 (285)
237 PF00069 Pkinase:  Protein kina  99.2 3.6E-12 7.7E-17   86.3   2.5   92    1-102   165-257 (260)
238 KOG0592 3-phosphoinositide-dep  99.2 8.6E-12 1.9E-16   90.1   4.4   87    1-104   254-340 (604)
239 cd06656 STKc_PAK3 Catalytic do  99.2   6E-12 1.3E-16   87.2   3.5   88    1-102   182-269 (297)
240 cd07831 STKc_MOK Catalytic dom  99.2 7.8E-12 1.7E-16   85.7   4.0   96    1-102   165-279 (282)
241 cd05612 STKc_PRKX_like Catalyt  99.2 4.2E-12 9.1E-17   87.7   2.6   86    1-103   165-255 (291)
242 cd06641 STKc_MST3 Catalytic do  99.2 4.9E-12 1.1E-16   86.7   3.0   86    1-102   168-253 (277)
243 cd05632 STKc_GRK5 Catalytic do  99.2 8.8E-12 1.9E-16   85.9   4.1   89    1-102   168-261 (285)
244 cd06659 STKc_PAK6 Catalytic do  99.2 5.5E-12 1.2E-16   87.4   3.1   88    1-102   184-271 (297)
245 PHA03211 serine/threonine kina  99.2   2E-11 4.3E-16   89.4   6.1  102    1-102   329-455 (461)
246 cd05595 STKc_PKB_beta Catalyti  99.2 1.2E-11 2.5E-16   86.8   4.7   85    1-102   162-251 (323)
247 cd05620 STKc_nPKC_delta Cataly  99.2 1.3E-11 2.9E-16   86.3   4.9   84    1-101   163-247 (316)
248 PHA03210 serine/threonine kina  99.2 1.2E-11 2.6E-16   91.6   4.8   33    1-33    335-367 (501)
249 cd05574 STKc_phototropin_like   99.2 3.3E-12 7.2E-17   89.1   1.8   87    1-102   199-289 (316)
250 cd05591 STKc_nPKC_epsilon Cata  99.2 3.7E-12 7.9E-17   89.2   2.0   85    1-102   163-254 (321)
251 cd08530 STKc_CNK2-like Catalyt  99.2 7.8E-12 1.7E-16   84.4   3.5   86    1-102   168-253 (256)
252 cd07844 STKc_PCTAIRE_like Cata  99.2   4E-12 8.7E-17   87.6   2.1   99    1-102   170-288 (291)
253 KOG0589 Serine/threonine prote  99.2 6.9E-12 1.5E-16   89.4   3.3   86    1-102   173-258 (426)
254 cd07858 STKc_TEY_MAPK_plant Ca  99.2 3.8E-12 8.3E-17   89.7   2.0  101    1-102   175-291 (337)
255 cd07834 STKc_MAPK Catalytic do  99.2 4.2E-12 9.1E-17   89.1   2.2   97    1-102   173-289 (330)
256 cd07842 STKc_CDK8_like Catalyt  99.2 1.2E-11 2.6E-16   86.1   4.4   37    1-37    182-219 (316)
257 PTZ00263 protein kinase A cata  99.2 4.1E-12   9E-17   89.3   2.1   85    1-102   182-271 (329)
258 cd05592 STKc_nPKC_theta_delta   99.2 6.3E-12 1.4E-16   87.9   2.9   84    1-101   163-247 (316)
259 cd05122 PKc_STE Catalytic doma  99.2 2.5E-11 5.5E-16   81.5   5.8   88    1-102   164-251 (253)
260 cd06629 STKc_MAPKKK_Bck1_like   99.2 2.7E-11 5.9E-16   82.7   5.9   91    1-102   177-269 (272)
261 cd07843 STKc_CDC2L1 Catalytic   99.2 9.7E-12 2.1E-16   85.8   3.8   99    1-102   173-290 (293)
262 cd07845 STKc_CDK10 Catalytic d  99.2   5E-12 1.1E-16   88.0   2.3  101    1-104   175-292 (309)
263 cd06617 PKc_MKK3_6 Catalytic d  99.2 2.9E-11 6.3E-16   82.9   6.0   88    1-102   170-261 (283)
264 cd05593 STKc_PKB_gamma Catalyt  99.2 3.2E-12 6.8E-17   89.8   1.3   85    1-102   162-251 (328)
265 cd07829 STKc_CDK_like Catalyti  99.2   3E-11 6.4E-16   82.7   6.0   98    1-102   165-279 (282)
266 cd07830 STKc_MAK_like Catalyti  99.2 1.4E-11   3E-16   84.5   4.4  101    1-102   165-280 (283)
267 cd08215 STKc_Nek Catalytic dom  99.2 2.8E-11   6E-16   81.6   5.7   86    1-102   170-255 (258)
268 cd05616 STKc_cPKC_beta Catalyt  99.2   5E-12 1.1E-16   88.6   2.2   84    1-101   168-256 (323)
269 PTZ00266 NIMA-related protein   99.2 1.6E-11 3.4E-16   95.8   5.0   85    1-101   208-294 (1021)
270 cd07879 STKc_p38delta_MAPK13 C  99.2 2.5E-12 5.5E-17   90.8   0.7  103    1-107   181-304 (342)
271 cd07855 STKc_ERK5 Catalytic do  99.2   7E-12 1.5E-16   88.2   2.8   99    1-104   178-296 (334)
272 cd06645 STKc_MAP4K3 Catalytic   99.2 2.4E-11 5.1E-16   82.7   5.4   90    1-102   173-265 (267)
273 KOG0694 Serine/threonine prote  99.2 6.7E-12 1.5E-16   92.7   2.7   84    1-101   535-623 (694)
274 cd06658 STKc_PAK5 Catalytic do  99.2 8.5E-12 1.8E-16   86.3   3.1   88    1-102   185-272 (292)
275 KOG0610 Putative serine/threon  99.2   9E-12 1.9E-16   87.5   3.1   87    1-102   302-392 (459)
276 cd05573 STKc_ROCK_NDR_like Cat  99.2 8.1E-12 1.8E-16   88.3   2.9   89    1-103   197-286 (350)
277 cd08222 STKc_Nek11 Catalytic d  99.2 9.2E-12   2E-16   84.5   3.0   86    1-102   172-257 (260)
278 cd06632 STKc_MEKK1_plant Catal  99.2 1.8E-11   4E-16   82.7   4.5   87    1-102   168-255 (258)
279 cd07870 STKc_PFTAIRE2 Catalyti  99.2 1.1E-11 2.3E-16   85.5   3.4   98    1-102   170-288 (291)
280 cd07849 STKc_ERK1_2_like Catal  99.2 3.6E-12 7.8E-17   89.7   1.0   98    1-102   176-292 (336)
281 cd07854 STKc_MAPK4_6 Catalytic  99.2 4.8E-11   1E-15   84.3   6.7   99    1-102   185-300 (342)
282 cd06652 STKc_MEKK2 Catalytic d  99.2 1.2E-11 2.6E-16   84.2   3.5   86    1-102   176-261 (265)
283 cd05042 PTKc_Aatyk Catalytic d  99.2 5.3E-11 1.2E-15   81.1   6.7   92    1-104   169-268 (269)
284 cd05577 STKc_GRK Catalytic dom  99.2 2.2E-11 4.8E-16   83.4   4.8   88    1-101   161-253 (277)
285 cd05584 STKc_p70S6K Catalytic   99.2   5E-12 1.1E-16   88.6   1.5   85    1-102   167-256 (323)
286 cd07866 STKc_BUR1 Catalytic do  99.2 2.6E-11 5.7E-16   84.2   5.1   99    1-102   193-308 (311)
287 KOG0588 Serine/threonine prote  99.2 1.2E-11 2.5E-16   91.4   3.3   87    1-104   178-265 (786)
288 PHA03390 pk1 serine/threonine-  99.2 1.9E-11 4.1E-16   83.5   4.1   89    1-102   173-262 (267)
289 KOG0605 NDR and related serine  99.2   3E-11 6.4E-16   87.2   5.2   87    1-102   355-445 (550)
290 cd07832 STKc_CCRK Catalytic do  99.2   7E-11 1.5E-15   81.1   6.9   97    1-102   167-282 (286)
291 cd05609 STKc_MAST Catalytic do  99.2 1.5E-11 3.3E-16   85.4   3.4   91    1-105   183-273 (305)
292 cd05578 STKc_Yank1 Catalytic d  99.2 3.1E-11 6.8E-16   81.8   4.8   87    1-101   166-254 (258)
293 KOG0574 STE20-like serine/thre  99.2 6.1E-12 1.3E-16   85.7   1.3   88    1-102   196-283 (502)
294 cd07864 STKc_CDK12 Catalytic d  99.2 1.2E-11 2.5E-16   85.7   2.7   97    1-102   184-299 (302)
295 cd05603 STKc_SGK2 Catalytic do  99.2 2.2E-11 4.7E-16   85.3   4.1   80    1-97    163-242 (321)
296 KOG0597 Serine-threonine prote  99.2 2.5E-11 5.5E-16   88.6   4.4   85    1-102   167-251 (808)
297 cd05587 STKc_cPKC Catalytic do  99.2   9E-12 1.9E-16   87.4   2.1   85    1-102   168-257 (324)
298 KOG0579 Ste20-like serine/thre  99.2 5.4E-11 1.2E-15   88.2   6.1   89    1-103   197-290 (1187)
299 cd06611 STKc_SLK_like Catalyti  99.2 1.6E-11 3.5E-16   84.2   3.3   88    1-102   170-262 (280)
300 cd05594 STKc_PKB_alpha Catalyt  99.2 1.7E-12 3.6E-17   91.1  -1.8   85    1-102   163-252 (325)
301 KOG0583 Serine/threonine prote  99.2   2E-11 4.2E-16   87.0   3.6   84    1-102   188-275 (370)
302 KOG4645 MAPKKK (MAP kinase kin  99.2 6.2E-12 1.4E-16   98.5   1.2   90    1-106  1405-1498(1509)
303 cd05611 STKc_Rim15_like Cataly  99.2 1.4E-11   3E-16   83.6   2.7   90    1-103   160-249 (260)
304 cd06633 STKc_TAO3 Catalytic do  99.2 4.9E-11 1.1E-15   83.3   5.4   87    1-102   184-273 (313)
305 cd07837 STKc_CdkB_plant Cataly  99.2 1.3E-11 2.7E-16   85.2   2.4   96    1-102   178-291 (295)
306 cd07852 STKc_MAPK15 Catalytic   99.2 1.5E-11 3.3E-16   86.6   2.4   97    1-102   179-295 (337)
307 cd05572 STKc_cGK_PKG Catalytic  99.1   1E-10 2.2E-15   79.4   6.1   88    1-101   159-251 (262)
308 PTZ00426 cAMP-dependent protei  99.1 4.1E-11 8.9E-16   84.7   4.3   85    1-102   195-284 (340)
309 cd05582 STKc_RSK_N N-terminal   99.1 4.6E-12   1E-16   88.6  -0.6   81    1-98    165-245 (318)
310 cd07851 STKc_p38 Catalytic dom  99.1 8.1E-12 1.8E-16   88.2   0.5   97    1-102   182-298 (343)
311 cd07841 STKc_CDK7 Catalytic do  99.1 2.8E-11 6.1E-16   83.7   3.1   99    1-102   169-282 (298)
312 PTZ00024 cyclin-dependent prot  99.1 2.1E-11 4.5E-16   85.8   2.3  100    1-104   200-315 (335)
313 cd05575 STKc_SGK Catalytic dom  99.1 7.7E-12 1.7E-16   87.7   0.0   84    1-101   163-250 (323)
314 KOG0615 Serine/threonine prote  99.1 2.5E-11 5.3E-16   85.3   2.5   90    1-102   345-437 (475)
315 PLN00009 cyclin-dependent kina  99.1 5.4E-11 1.2E-15   82.2   4.1   97    1-102   170-284 (294)
316 cd05583 STKc_MSK_N N-terminal   99.1 1.4E-10 3.1E-15   79.8   6.0   93    1-106   173-267 (288)
317 cd07877 STKc_p38alpha_MAPK14 C  99.1   2E-11 4.3E-16   86.4   1.7   99    1-103   184-301 (345)
318 cd05633 STKc_GRK3 Catalytic do  99.1 6.3E-11 1.4E-15   81.4   4.0   89    1-103   162-256 (279)
319 cd06657 STKc_PAK4 Catalytic do  99.1 5.2E-11 1.1E-15   82.4   3.5   88    1-102   183-270 (292)
320 cd05576 STKc_RPK118_like Catal  99.1 4.7E-11   1E-15   80.2   3.0   75    1-96    149-223 (237)
321 cd07836 STKc_Pho85 Catalytic d  99.1   8E-11 1.7E-15   80.8   4.2   98    1-102   167-281 (284)
322 KOG4717 Serine/threonine prote  99.1 1.3E-10 2.9E-15   84.3   5.3   86    2-106   186-276 (864)
323 cd05579 STKc_MAST_like Catalyt  99.1 6.1E-11 1.3E-15   80.3   3.4   89    1-104   168-256 (265)
324 cd07856 STKc_Sty1_Hog1 Catalyt  99.1 3.4E-10 7.3E-15   79.6   7.2  103    1-103   172-289 (328)
325 smart00220 S_TKc Serine/Threon  99.1   2E-10 4.4E-15   76.5   5.8   88    1-101   153-240 (244)
326 cd05602 STKc_SGK1 Catalytic do  99.1 4.9E-11 1.1E-15   83.7   2.9   83    1-100   163-245 (325)
327 cd05581 STKc_PDK1 Catalytic do  99.1 3.6E-11 7.7E-16   82.2   2.1   85    1-102   189-277 (280)
328 cd05604 STKc_SGK3 Catalytic do  99.1 1.3E-11 2.9E-16   86.5  -0.3   81    1-98    163-243 (325)
329 cd05601 STKc_CRIK Catalytic do  99.1 1.2E-11 2.7E-16   86.8  -0.7   88    1-102   170-263 (330)
330 cd05626 STKc_LATS2 Catalytic d  99.1 1.8E-10 3.9E-15   82.6   5.2   90    1-103   215-306 (381)
331 KOG1290 Serine/threonine prote  99.1   8E-10 1.7E-14   79.4   8.2  102    2-103   419-551 (590)
332 cd05615 STKc_cPKC_alpha Cataly  99.1 5.6E-11 1.2E-15   83.3   2.4   79    1-96    168-246 (323)
333 KOG0598 Ribosomal protein S6 k  99.1 9.7E-11 2.1E-15   81.1   3.4   85    1-101   192-280 (357)
334 cd05586 STKc_Sck1_like Catalyt  99.1 1.2E-11 2.6E-16   86.9  -1.1   86    1-102   163-253 (330)
335 cd07857 STKc_MPK1 Catalytic do  99.1 8.6E-11 1.9E-15   82.6   3.0   97    1-102   176-292 (332)
336 cd05606 STKc_beta_ARK Catalyti  99.1 1.1E-10 2.3E-15   80.2   3.2   88    1-102   162-255 (278)
337 cd06653 STKc_MEKK3_like_1 Cata  99.1   1E-10 2.2E-15   79.6   3.0   86    1-102   176-261 (264)
338 cd06627 STKc_Cdc7_like Catalyt  99.1   3E-10 6.4E-15   76.6   5.2   85    1-101   166-250 (254)
339 cd05599 STKc_NDR_like Catalyti  99.1 1.6E-10 3.4E-15   82.3   3.9   88    1-102   206-296 (364)
340 KOG0584 Serine/threonine prote  99.0 2.7E-10 5.8E-15   83.7   5.0   86    1-102   211-296 (632)
341 PRK13184 pknD serine/threonine  99.0 1.2E-10 2.6E-15   90.5   3.3   92    1-106   198-290 (932)
342 KOG1006 Mitogen-activated prot  99.0 1.4E-10   3E-15   77.8   3.1   92    1-102   234-327 (361)
343 KOG0033 Ca2+/calmodulin-depend  99.0 2.8E-10   6E-15   75.7   4.4   88    1-101   179-266 (355)
344 cd05123 STKc_AGC Catalytic dom  99.0 4.3E-10 9.3E-15   75.7   5.5   84    1-101   160-246 (250)
345 KOG0600 Cdc2-related protein k  99.0 3.1E-10 6.8E-15   81.6   5.0  101    2-102   287-400 (560)
346 cd05596 STKc_ROCK Catalytic do  99.0 3.7E-10   8E-15   80.7   5.0   90    1-103   210-305 (370)
347 KOG0577 Serine/threonine prote  99.0 3.6E-10 7.8E-15   83.2   4.7   86    1-101   189-277 (948)
348 cd05625 STKc_LATS1 Catalytic d  99.0 1.1E-10 2.3E-15   83.7   1.6   36    1-36    215-250 (382)
349 KOG0658 Glycogen synthase kina  99.0 1.8E-10 3.9E-15   79.7   2.6  101    2-102   193-306 (364)
350 cd05598 STKc_LATS Catalytic do  99.0 5.9E-11 1.3E-15   84.8  -0.1   88    1-102   211-301 (376)
351 KOG1151 Tousled-like protein k  99.0 4.2E-10 9.1E-15   80.5   4.1   89    1-100   647-739 (775)
352 cd05580 STKc_PKA Catalytic dom  99.0 7.4E-10 1.6E-14   76.4   5.3   85    1-102   165-254 (290)
353 cd07880 STKc_p38gamma_MAPK12 C  99.0 1.4E-09   3E-14   77.0   6.2   96    1-102   182-298 (343)
354 KOG0604 MAP kinase-activated p  99.0 1.2E-09 2.7E-14   74.4   5.5   94    1-104   230-324 (400)
355 KOG0595 Serine/threonine-prote  99.0 9.2E-10   2E-14   77.4   4.9   37    1-37    181-217 (429)
356 KOG0659 Cdk activating kinase   99.0 4.8E-10   1E-14   75.0   2.9   96    2-102   169-281 (318)
357 cd05629 STKc_NDR_like_fungal C  98.9 2.1E-10 4.5E-15   82.1   1.1   88    1-103   215-306 (377)
358 KOG0195 Integrin-linked kinase  98.9 3.9E-10 8.5E-15   76.1   2.3   91    1-106   353-446 (448)
359 KOG0585 Ca2+/calmodulin-depend  98.9 2.1E-09 4.5E-14   77.2   5.6   92    1-107   282-377 (576)
360 cd05628 STKc_NDR1 Catalytic do  98.9 1.5E-09 3.3E-14   77.3   4.4   36    1-36    203-238 (363)
361 KOG0663 Protein kinase PITSLRE  98.9 3.2E-09 6.9E-14   73.3   5.7   96    2-102   245-361 (419)
362 cd05613 STKc_MSK1_N N-terminal  98.9 2.3E-09   5E-14   73.9   5.0   89    1-102   173-268 (290)
363 KOG0032 Ca2+/calmodulin-depend  98.9 1.3E-09 2.7E-14   78.0   3.4   90    1-103   205-294 (382)
364 cd05627 STKc_NDR2 Catalytic do  98.9 9.2E-10   2E-14   78.3   2.8   36    1-36    203-238 (360)
365 PLN03225 Serine/threonine-prot  98.9 5.8E-09 1.3E-13   78.4   6.5   26   78-103   426-451 (566)
366 cd05622 STKc_ROCK1 Catalytic d  98.9   4E-09 8.6E-14   75.5   5.4   91    1-104   210-306 (371)
367 cd05597 STKc_DMPK_like Catalyt  98.9 3.8E-09 8.2E-14   74.4   5.2   35    1-35    170-209 (331)
368 cd05623 STKc_MRCK_alpha Cataly  98.9 1.5E-09 3.3E-14   76.4   3.0   35    1-35    170-209 (332)
369 KOG0696 Serine/threonine prote  98.9 2.7E-09 5.8E-14   75.9   3.8   79    1-96    517-595 (683)
370 cd05621 STKc_ROCK2 Catalytic d  98.8 5.4E-09 1.2E-13   74.8   5.4   90    1-103   210-305 (370)
371 KOG0986 G protein-coupled rece  98.8 9.2E-10   2E-14   78.6   1.3   84    1-97    353-436 (591)
372 KOG2052 Activin A type IB rece  98.8 3.3E-09 7.1E-14   75.5   4.0  103    1-108   387-505 (513)
373 KOG0616 cAMP-dependent protein  98.8 3.9E-09 8.4E-14   71.8   3.6   76    1-93    208-283 (355)
374 KOG0670 U4/U6-associated splic  98.8 1.1E-09 2.3E-14   79.6   0.3   98    2-103   603-747 (752)
375 cd05624 STKc_MRCK_beta Catalyt  98.8 7.6E-09 1.7E-13   72.9   4.2   35    1-35    170-209 (331)
376 KOG0594 Protein kinase PCTAIRE  98.8 3.8E-09 8.3E-14   72.9   2.2   96    2-102   188-302 (323)
377 KOG1035 eIF-2alpha kinase GCN2  98.8 1.1E-08 2.4E-13   80.4   4.7   86    1-101   782-870 (1351)
378 KOG0580 Serine/threonine prote  98.7   1E-08 2.2E-13   67.8   3.2   86    1-103   189-274 (281)
379 KOG0607 MAP kinase-interacting  98.7 2.1E-08 4.6E-13   69.2   4.7   93    1-102   253-361 (463)
380 KOG0611 Predicted serine/threo  98.7 2.6E-08 5.6E-13   70.8   5.0   85    2-104   220-305 (668)
381 KOG0665 Jun-N-terminal kinase   98.7   1E-08 2.2E-13   70.3   2.7  102    2-103   185-311 (369)
382 KOG1023 Natriuretic peptide re  98.7 5.4E-08 1.2E-12   71.1   6.3  102    1-109   118-227 (484)
383 KOG0666 Cyclin C-dependent kin  98.6 9.3E-08   2E-12   65.8   5.9  102    2-103   207-338 (438)
384 KOG0690 Serine/threonine prote  98.6 2.6E-08 5.7E-13   68.9   2.6   84    1-101   335-423 (516)
385 KOG0695 Serine/threonine prote  98.6 5.1E-08 1.1E-12   67.9   3.6   85    1-95    418-503 (593)
386 KOG0614 cGMP-dependent protein  98.6 4.5E-08 9.7E-13   71.3   3.2   87    1-102   586-677 (732)
387 KOG3653 Transforming growth fa  98.5 2.4E-07 5.3E-12   66.7   6.3  107    1-111   385-508 (534)
388 KOG0599 Phosphorylase kinase g  98.5 2.1E-08 4.5E-13   67.9   0.8   91    1-104   189-285 (411)
389 KOG0669 Cyclin T-dependent kin  98.5 1.4E-07 2.9E-12   63.4   4.1  101    2-102   196-315 (376)
390 KOG0586 Serine/threonine prote  98.5 6.1E-08 1.3E-12   71.4   2.0   85    1-104   221-308 (596)
391 cd00180 PKc Catalytic domain o  98.5   2E-07 4.3E-12   60.5   4.0   55    1-103   160-215 (215)
392 KOG0587 Traf2- and Nck-interac  98.5 6.7E-08 1.4E-12   73.9   1.9   88    1-102   190-282 (953)
393 KOG0664 Nemo-like MAPK-related  98.4 2.1E-07 4.6E-12   63.2   3.3  103    2-104   225-345 (449)
394 KOG0984 Mitogen-activated prot  98.4 1.5E-07 3.2E-12   61.4   1.8   37    1-37    215-255 (282)
395 KOG1027 Serine/threonine prote  98.4 9.3E-08   2E-12   72.8   0.5   86    1-102   681-767 (903)
396 KOG0590 Checkpoint kinase and   98.2   1E-06 2.2E-11   66.7   2.2   98    1-106   491-591 (601)
397 KOG0608 Warts/lats-like serine  98.2 9.5E-07 2.1E-11   66.3   1.9   38    1-38    838-875 (1034)
398 KOG0612 Rho-associated, coiled  98.1 3.2E-06   7E-11   66.8   4.0   34    1-34    243-281 (1317)
399 KOG1240 Protein kinase contain  98.0 1.1E-05 2.3E-10   64.1   5.2   86    1-102   194-291 (1431)
400 KOG4250 TANK binding protein k  98.0 4.8E-06   1E-10   62.8   2.8   39    1-39    190-229 (732)
401 KOG1033 eIF-2alpha kinase PEK/  97.9 5.1E-06 1.1E-10   60.7   2.1   80    1-99    429-509 (516)
402 KOG0668 Casein kinase II, alph  97.9 1.6E-05 3.4E-10   53.0   4.1   99    3-102   201-322 (338)
403 PLN03224 probable serine/threo  97.9 1.3E-05 2.8E-10   59.7   3.8   29   76-104   471-502 (507)
404 KOG0576 Mitogen-activated prot  97.9 1.8E-05 3.9E-10   59.7   4.0   88    1-101   179-270 (829)
405 KOG1345 Serine/threonine kinas  97.8 1.1E-05 2.4E-10   54.9   2.1   83   11-102   202-284 (378)
406 KOG0662 Cyclin-dependent kinas  97.8 3.5E-05 7.6E-10   49.6   4.1  101    2-102   169-283 (292)
407 KOG1167 Serine/threonine prote  97.8 1.4E-05 3.1E-10   56.8   2.1   33    2-34    245-278 (418)
408 smart00221 STYKc Protein kinas  97.7   2E-05 4.4E-10   51.9   2.1   35    1-35    166-201 (225)
409 KOG4158 BRPK/PTEN-induced prot  97.6 8.6E-05 1.9E-09   53.4   3.6   86    1-101   418-509 (598)
410 KOG4236 Serine/threonine prote  97.4 8.9E-06 1.9E-10   60.1  -3.1   85    1-101   733-818 (888)
411 KOG0606 Microtubule-associated  97.3 0.00011 2.4E-09   58.2   1.5   35    1-35    225-259 (1205)
412 PF14531 Kinase-like:  Kinase-l  97.2 0.00037   8E-09   48.3   3.2   64    9-93    225-288 (288)
413 KOG0603 Ribosomal protein S6 k  96.6   0.001 2.2E-08   50.1   1.5   33    1-35    160-192 (612)
414 COG0515 SPS1 Serine/threonine   96.3   0.018   4E-07   39.5   6.5   98    1-102   175-275 (384)
415 KOG1266 Protein kinase [Signal  95.8  0.0093   2E-07   42.3   2.8   30    3-32    251-280 (458)
416 PF11883 DUF3403:  Domain of un  94.8    0.08 1.7E-06   26.4   3.6   43  107-149     4-48  (48)
417 KOG1093 Predicted protein kina  91.8   0.041 8.8E-07   41.6  -0.4   22   13-34    110-131 (725)
418 KOG0606 Microtubule-associated  91.5    0.14   3E-06   41.7   2.1   37    1-37   1002-1038(1205)
419 KOG2137 Protein kinase [Signal  91.2   0.046 9.9E-07   42.2  -0.7   88    1-101   176-264 (700)
420 KOG0590 Checkpoint kinase and   90.9   0.082 1.8E-06   40.8   0.4   88    1-101   196-285 (601)
421 KOG1164 Casein kinase (serine/  84.9     3.6 7.7E-05   29.2   5.5   88    8-107   211-298 (322)
422 cd00059 FH Forkhead (FH), also  49.5      36 0.00079   18.8   3.3   30   81-110     9-38  (78)
423 KOG1266 Protein kinase [Signal  44.6      28 0.00062   25.5   2.8   26    2-27     35-60  (458)
424 smart00339 FH FORKHEAD. FORKHE  43.2      42 0.00091   19.1   3.0   29   81-109     9-37  (89)
425 PF08189 Meleagrin:  Meleagrin/  39.6     9.6 0.00021   17.6  -0.0    9   13-21     17-25  (39)
426 COG4248 Uncharacterized protei  37.1      46   0.001   25.5   3.0   29   10-38    197-226 (637)
427 PF04301 DUF452:  Protein of un  35.0 1.1E+02  0.0024   20.7   4.3   17   91-107   137-153 (213)
428 KOG0601 Cyclin-dependent kinas  32.2      36 0.00078   26.3   1.9   31    2-33    296-326 (524)
429 PF05953 Allatostatin:  Allatos  29.5      24 0.00051   11.7   0.3    6   16-21      4-9   (11)
430 KOG1166 Mitotic checkpoint ser  29.4      25 0.00055   29.3   0.8   30    3-32    872-901 (974)
431 PF12263 DUF3611:  Protein of u  28.9   1E+02  0.0022   20.3   3.3   28   77-104    78-105 (183)
432 PF15361 RIC3:  Resistance to i  25.1      45 0.00097   21.2   1.2   13   17-29     88-100 (152)
433 PF00250 Fork_head:  Fork head   23.9      58  0.0012   18.8   1.4   27   81-107     9-35  (96)
434 smart00707 RPEL Repeat in Dros  21.8      71  0.0015   13.6   1.1   11   91-101     8-18  (26)
435 PF02755 RPEL:  RPEL repeat;  I  20.5      72  0.0016   13.5   1.0   10   92-101     9-18  (26)

No 1  
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.73  E-value=1e-18  Score=124.41  Aligned_cols=92  Identities=28%  Similarity=0.356  Sum_probs=69.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++..++|+.|+|||||||++||+++ |+.||....   ...++             +.+..+.+..++..|+..+.
T Consensus       371 tAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms---n~ev~-------------~~le~GyRlp~P~~CP~~vY  434 (468)
T KOG0197|consen  371 TAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS---NEEVL-------------ELLERGYRLPRPEGCPDEVY  434 (468)
T ss_pred             cCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC---HHHHH-------------HHHhccCcCCCCCCCCHHHH
Confidence            58999999999999999999999999987 888865321   11122             12223333334445566778


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      ++|..||+.+|++||||..+...|..+..
T Consensus       435 ~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  435 ELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             HHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            89999999999999999998888876653


No 2  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.72  E-value=3.1e-17  Score=115.72  Aligned_cols=92  Identities=24%  Similarity=0.316  Sum_probs=69.6

Q ss_pred             CCccccc--CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYAS--DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~--~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++.  ...|+.|+||||||+++||+++|+.||.....      ...+......+..+.+..         .+...+
T Consensus       211 MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~------~~~~~~v~~~~~Rp~~p~---------~~~~~l  275 (362)
T KOG0192|consen  211 MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP------VQVASAVVVGGLRPPIPK---------ECPPHL  275 (362)
T ss_pred             cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHhcCCCCCCCc---------cCCHHH
Confidence            8999999  56899999999999999999999999864432      223333333333332221         144567


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      ..++.+||..||.+||++.+++..|..+.
T Consensus       276 ~~l~~~CW~~dp~~RP~f~ei~~~l~~~~  304 (362)
T KOG0192|consen  276 SSLMERCWLVDPSRRPSFLEIVSRLESIM  304 (362)
T ss_pred             HHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence            77888999999999999999999988665


No 3  
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72  E-value=7.2e-19  Score=131.02  Aligned_cols=93  Identities=28%  Similarity=0.350  Sum_probs=71.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||.+.+++|++++|||||||++||+++ |+.||...-.   ..    +...+.++.+         ..++..|+..+.
T Consensus       672 MppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---~E----VIe~i~~g~l---------L~~Pe~CP~~vY  735 (774)
T KOG1026|consen  672 MPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---QE----VIECIRAGQL---------LSCPENCPTEVY  735 (774)
T ss_pred             CCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch---HH----HHHHHHcCCc---------ccCCCCCCHHHH
Confidence            89999999999999999999999999986 8888643322   12    2222333333         334455667788


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCcC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETVL  109 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  109 (149)
                      +||+.||+.+|.+||+|.+|...|+.....
T Consensus       736 ~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  736 SLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             HHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            899999999999999999999999876544


No 4  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.72  E-value=3.6e-17  Score=115.72  Aligned_cols=107  Identities=33%  Similarity=0.571  Sum_probs=92.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhh-ccccH-HHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQ-DLCNF-AEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~   78 (149)
                      +|||+...+.++.|+|||||||+++|+++|+.+.+...+.....+..|+...+.++...++.++.+. ..+.. .+..++
T Consensus       245 ~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~  324 (361)
T KOG1187|consen  245 LAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKL  324 (361)
T ss_pred             CChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHH
Confidence            5899999999999999999999999999999887755555666799999888888888889998876 44443 577889


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      ..++.+|++.++.+||+|.+|+++|+.+.
T Consensus       325 ~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  325 AELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             HHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            99999999999999999999999996544


No 5  
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.69  E-value=1.9e-17  Score=119.91  Aligned_cols=90  Identities=24%  Similarity=0.283  Sum_probs=70.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.....+.|+|||||||++|||++|..||...+..    .+           ...+....+....+..++..+.-
T Consensus       278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AI-----------IwGVGsNsL~LpvPstcP~Gfkl  342 (904)
T KOG4721|consen  278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AI-----------IWGVGSNSLHLPVPSTCPDGFKL  342 (904)
T ss_pred             hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----ee-----------EEeccCCcccccCcccCchHHHH
Confidence            8999999999999999999999999999999997543321    11           11222233334455556677788


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      |++.||...|..||+|.+++.+|.-
T Consensus       343 L~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  343 LLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HHHHHHhcCCCCCccHHHHHHHHhh
Confidence            9999999999999999999998864


No 6  
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.67  E-value=1.9e-16  Score=101.66  Aligned_cols=99  Identities=15%  Similarity=0.193  Sum_probs=64.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++|||||||++||+++|+.||.....  ....................     ...........+.+
T Consensus        71 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  143 (176)
T smart00750       71 MAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERE--LSAILEILLNGMPADDPRDR-----SNLESVSAARSFAD  143 (176)
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccch--hcHHHHHHHHHhccCCcccc-----ccHHHHHhhhhHHH
Confidence            799999999999999999999999999999999743211  11111111111111100000     00000111125788


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ++.+||..+|.+||++.++++++...
T Consensus       144 ~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      144 FMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHhcccccccCHHHHHHHHHHH
Confidence            99999999999999999999987643


No 7  
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.66  E-value=6.4e-17  Score=124.34  Aligned_cols=91  Identities=31%  Similarity=0.388  Sum_probs=67.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||.+..+.|+.|+|||||||++||+++ |..||....+..   +.   ......++          ...+..|+.++.
T Consensus       871 m~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---v~---~~~~~ggR----------L~~P~~CP~~ly  934 (1025)
T KOG1095|consen  871 MPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---VL---LDVLEGGR----------LDPPSYCPEKLY  934 (1025)
T ss_pred             CCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---HH---HHHHhCCc----------cCCCCCCChHHH
Confidence            89999999999999999999999999987 888976443211   11   11122221          222334556777


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      ++|+.||+.+|++||+|..|++.+..+.
T Consensus       935 ~lM~~CW~~~pe~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  935 QLMLQCWKHDPEDRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             HHHHHHccCChhhCccHHHHHhhhhhhh
Confidence            8999999999999999999999776654


No 8  
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.63  E-value=9.9e-16  Score=120.53  Aligned_cols=107  Identities=25%  Similarity=0.453  Sum_probs=74.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhh--ccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQ--DLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   78 (149)
                      ||||++.+..|+.++|||||||++||+++|+.||+.... .......|..............++...  ...+..+...+
T Consensus       845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  923 (968)
T PLN00113        845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEV  923 (968)
T ss_pred             cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHH
Confidence            699999999999999999999999999999999753222 223344444333222222122222221  12234456678


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      .+++.+||+.+|++||+|.++++.|+.+..
T Consensus       924 ~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        924 MNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            899999999999999999999999987654


No 9  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.63  E-value=6.6e-16  Score=106.29  Aligned_cols=93  Identities=24%  Similarity=0.325  Sum_probs=67.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||.+.+..|+.++||||||+.++|++.|+.||.... .......+. ...+..+.++.....        .+...+..
T Consensus       244 MsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~-~~~~~~~~L-l~~Iv~~ppP~lP~~--------~fS~ef~~  313 (364)
T KOG0581|consen  244 MSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN-PPYLDIFEL-LCAIVDEPPPRLPEG--------EFSPEFRS  313 (364)
T ss_pred             cChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC-CCCCCHHHH-HHHHhcCCCCCCCcc--------cCCHHHHH
Confidence            89999999999999999999999999999999976431 111222222 223344445444332        23345566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++-.||++||.+||++.|++++-
T Consensus       314 FV~~CL~Kdp~~R~s~~qLl~Hp  336 (364)
T KOG0581|consen  314 FVSCCLRKDPSERPSAKQLLQHP  336 (364)
T ss_pred             HHHHHhcCCcccCCCHHHHhcCH
Confidence            77799999999999999999853


No 10 
>PHA02988 hypothetical protein; Provisional
Probab=99.62  E-value=1.9e-16  Score=108.95  Aligned_cols=92  Identities=21%  Similarity=0.329  Sum_probs=64.0

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      +|||++.+  ..|+.++|||||||++||+++|+.||.....   .....   .....+.....         +..+...+
T Consensus       187 ~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---~~~~~---~i~~~~~~~~~---------~~~~~~~l  251 (283)
T PHA02988        187 FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---KEIYD---LIINKNNSLKL---------PLDCPLEI  251 (283)
T ss_pred             cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---HHHHH---HHHhcCCCCCC---------CCcCcHHH
Confidence            58999876  6899999999999999999999999863321   11111   11111111110         11123456


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      .+++.+||+.||++||++.++++.|+...
T Consensus       252 ~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        252 KCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            77888999999999999999999987654


No 11 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60  E-value=7.8e-16  Score=107.99  Aligned_cols=85  Identities=26%  Similarity=0.409  Sum_probs=66.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||+++...|+.|+|+||+|++.+||++|.+|+.-.++.....++.       ...++..-.         .+...+.+
T Consensus       178 MAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-------k~~PP~L~~---------~~S~~~kE  241 (467)
T KOG0201|consen  178 MAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-------KSAPPRLDG---------DFSPPFKE  241 (467)
T ss_pred             cchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-------CCCCCcccc---------ccCHHHHH
Confidence            89999998899999999999999999999999988777766554432       233332222         11233455


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      |+..||..||+.||++.++++
T Consensus       242 FV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  242 FVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHHhhcCcccCcCHHHHhh
Confidence            777999999999999999997


No 12 
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.57  E-value=1.1e-15  Score=112.21  Aligned_cols=90  Identities=28%  Similarity=0.354  Sum_probs=66.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      .|||.+.+..|+.|+|||+|||++||+.+ |-.||...+-.+       ++..+..+...         .-+..|+.+..
T Consensus       433 TAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-------VY~LLEkgyRM---------~~PeGCPpkVY  496 (1157)
T KOG4278|consen  433 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYGLLEKGYRM---------DGPEGCPPKVY  496 (1157)
T ss_pred             cCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-------HHHHHhccccc---------cCCCCCCHHHH
Confidence            48999999999999999999999999986 778876543222       22222222211         12223456677


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      .||+.||+++|.+||+|.++++.++.+
T Consensus       497 eLMraCW~WsPsDRPsFaeiHqafEtm  523 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQAFETM  523 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHHH
Confidence            899999999999999999999976644


No 13 
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.57  E-value=1.3e-15  Score=111.51  Aligned_cols=91  Identities=24%  Similarity=0.278  Sum_probs=71.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||.++...|+.++|||.|||++||++. |..||......+                ....+..+.+..++..|+..+.
T Consensus       559 maPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI~~iEnGeRlP~P~nCPp~LY  622 (974)
T KOG4257|consen  559 MAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VIGHIENGERLPCPPNCPPALY  622 (974)
T ss_pred             cCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eEEEecCCCCCCCCCCCChHHH
Confidence            79999999999999999999999999876 889987554333                3333344444455556677788


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      .|+.+||+.+|.+||.+.++...|..+.
T Consensus       623 slmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  623 SLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             HHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence            8999999999999999999988766543


No 14 
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.57  E-value=1.9e-16  Score=117.85  Aligned_cols=93  Identities=22%  Similarity=0.320  Sum_probs=68.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      .|||.+.+.+|+.++||||||+++||+++ |.+||  ++.. ....             ...+..+.+...+..|+..+.
T Consensus       801 TAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY--WdmS-NQdV-------------IkaIe~gyRLPpPmDCP~aL~  864 (996)
T KOG0196|consen  801 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY--WDMS-NQDV-------------IKAIEQGYRLPPPMDCPAALY  864 (996)
T ss_pred             cChhHhhhcccCchhhccccceEEEEecccCCCcc--cccc-hHHH-------------HHHHHhccCCCCCCCCcHHHH
Confidence            48999999999999999999999999764 88985  2211 1111             111222222333445667889


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCcC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETVL  109 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  109 (149)
                      .||+.||++|-..||+|.+|+..|.++...
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999886543


No 15 
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.56  E-value=1.2e-15  Score=106.42  Aligned_cols=90  Identities=26%  Similarity=0.333  Sum_probs=67.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |++|.+....|+.++|||+|||++||+++ |+.||...++-       .+..++++|..         ...++.|+..+.
T Consensus       465 MslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf-------Em~~ylkdGyR---------laQP~NCPDeLf  528 (563)
T KOG1024|consen  465 MSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF-------EMEHYLKDGYR---------LAQPFNCPDELF  528 (563)
T ss_pred             cCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH-------HHHHHHhccce---------ecCCCCCcHHHH
Confidence            67888888999999999999999999987 88887544432       22233333321         122334556777


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      .+|.-||+..|++||++.|+...|...
T Consensus       529 ~vMacCWallpeeRPsf~Qlv~cLseF  555 (563)
T KOG1024|consen  529 TVMACCWALLPEERPSFSQLVICLSEF  555 (563)
T ss_pred             HHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence            899999999999999999999988653


No 16 
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.53  E-value=3.7e-15  Score=102.25  Aligned_cols=89  Identities=26%  Similarity=0.340  Sum_probs=63.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++|||||||+++|+++ |..||......       .....+..+.....         +......+.
T Consensus       193 ~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-------~~~~~i~~~~~~~~---------~~~~~~~~~  256 (283)
T cd05048         193 MPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-------EVIEMIRSRQLLPC---------PEDCPARVY  256 (283)
T ss_pred             cCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHcCCcCCC---------cccCCHHHH
Confidence            68999988889999999999999999997 88886432211       11122222222111         112235567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +|+.+||+.||.+||++.+|++.|+.
T Consensus       257 ~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         257 ALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHhc
Confidence            78999999999999999999999875


No 17 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.53  E-value=3.4e-15  Score=105.06  Aligned_cols=92  Identities=30%  Similarity=0.414  Sum_probs=64.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||||++++|+++ |..||.......      ........+......         ......+.
T Consensus       243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~---------~~~~~~l~  307 (338)
T cd05102         243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE------EFCQRLKDGTRMRAP---------ENATPEIY  307 (338)
T ss_pred             cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH------HHHHHHhcCCCCCCC---------CCCCHHHH
Confidence            68999988889999999999999999996 889875432111      111112222211110         11123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.||.+||++.++++.|+...
T Consensus       308 ~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         308 RIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            7899999999999999999999988653


No 18 
>PTZ00284 protein kinase; Provisional
Probab=99.53  E-value=6e-15  Score=108.04  Aligned_cols=104  Identities=14%  Similarity=0.108  Sum_probs=63.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHH-----------------HHh-cCCCcchh
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWK-----------------LWN-KGMPSQLI   62 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~-----------------~~~-~~~~~~~~   62 (149)
                      ||||++.+..|+.++|||||||++|||++|+.||...........+.....                 .+. .+.+....
T Consensus       312 ~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (467)
T PTZ00284        312 RSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCT  391 (467)
T ss_pred             cCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccC
Confidence            689999999999999999999999999999999864432211111111100                 000 00000000


Q ss_pred             chh-h---hcccc---HHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           63 DAC-I---QDLCN---FAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        63 ~~~-~---~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+. .   .....   ......+++|+.+||+.||.+||++.|++++-.
T Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~  440 (467)
T PTZ00284        392 DPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPY  440 (467)
T ss_pred             CHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcc
Confidence            000 0   00000   011235678999999999999999999998544


No 19 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.52  E-value=1.8e-14  Score=101.68  Aligned_cols=95  Identities=21%  Similarity=0.306  Sum_probs=66.7

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++..  ..|+.|+||||||++..|+..|..||.-+.+...       .....++.++................+.+
T Consensus       197 mAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-------Ll~tLqn~pp~~~t~~~~~d~~k~~~ksf  269 (516)
T KOG0582|consen  197 MAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-------LLLTLQNDPPTLLTSGLDKDEDKKFSKSF  269 (516)
T ss_pred             cChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-------HHHHhcCCCCCcccccCChHHhhhhcHHH
Confidence            79999643  5699999999999999999999999865544322       22223455544332222211122233467


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..++..||+.||.+||++.+++++
T Consensus       270 ~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  270 REMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             HHHHHHHhhcCcccCCCHHHHhcc
Confidence            888889999999999999999973


No 20 
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.51  E-value=3.1e-15  Score=110.69  Aligned_cols=84  Identities=26%  Similarity=0.257  Sum_probs=63.2

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      |||.+...+|++++|||+|||++|||++ |..||....+..       +.+.         ++.+.....+..|..++.+
T Consensus       283 aPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-------IL~~---------iD~~erLpRPk~csedIY~  346 (1039)
T KOG0199|consen  283 APESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-------ILKN---------IDAGERLPRPKYCSEDIYQ  346 (1039)
T ss_pred             CHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH-------HHHh---------ccccccCCCCCCChHHHHH
Confidence            7999999999999999999999999987 778865332211       1111         1222233344456778899


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      +|++||+.+|.+||+|..|.+
T Consensus       347 imk~cWah~paDRptFsair~  367 (1039)
T KOG0199|consen  347 IMKNCWAHNPADRPTFSAIRE  367 (1039)
T ss_pred             HHHHhccCCccccccHHHHHH
Confidence            999999999999999999974


No 21 
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.51  E-value=2.4e-14  Score=107.67  Aligned_cols=90  Identities=28%  Similarity=0.357  Sum_probs=65.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||.+.+..|+.++|||||||++||+++ |..||.....  .    ......+..|...+         .+..+...+.
T Consensus       488 mApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--~----~~l~~~l~~G~r~~---------~P~~c~~eiY  552 (609)
T KOG0200|consen  488 MAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--T----EELLEFLKEGNRME---------QPEHCSDEIY  552 (609)
T ss_pred             cCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc--H----HHHHHHHhcCCCCC---------CCCCCCHHHH
Confidence            79999999999999999999999999987 7788753211  1    11122233332221         1222334566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      .+|+.||+.+|++||++.++.+.+..
T Consensus       553 ~iM~~CW~~~p~~RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  553 DLMKSCWNADPEDRPTFSECVEFFEK  578 (609)
T ss_pred             HHHHHHhCCCcccCCCHHHHHHHHHH
Confidence            79999999999999999999998877


No 22 
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51  E-value=1.3e-14  Score=104.79  Aligned_cols=90  Identities=28%  Similarity=0.390  Sum_probs=59.6

Q ss_pred             CCcccccC-----------CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhcc
Q 043384            1 MAPEYASD-----------GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDL   69 (149)
Q Consensus         1 ~apE~~~~-----------~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (149)
                      |+||.+..           .+.++++||||+||++|+|++|+.||..+     .+.+.++......+  .++.-+..   
T Consensus       528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-----~n~~aKl~aI~~P~--~~Iefp~~---  597 (677)
T KOG0596|consen  528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-----INQIAKLHAITDPN--HEIEFPDI---  597 (677)
T ss_pred             cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-----HHHHHHHHhhcCCC--ccccccCC---
Confidence            78887732           23779999999999999999999998532     22333222221111  11111111   


Q ss_pred             ccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           70 CNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        70 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                         .....++++|+.||++||++||++.+||++-
T Consensus       598 ---~~~~~li~~mK~CL~rdPkkR~si~eLLqhp  628 (677)
T KOG0596|consen  598 ---PENDELIDVMKCCLARDPKKRWSIPELLQHP  628 (677)
T ss_pred             ---CCchHHHHHHHHHHhcCcccCCCcHHHhcCc
Confidence               1122388899999999999999999999753


No 23 
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.51  E-value=7e-15  Score=100.97  Aligned_cols=105  Identities=22%  Similarity=0.237  Sum_probs=63.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++||||||++++++++|+.|+......-. ...........................+......+.+
T Consensus       177 ~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (283)
T cd05080         177 YAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYI  255 (283)
T ss_pred             eCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHH
Confidence            478988888899999999999999999999988653221100 0000000000000000000000100111112346778


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ++..||+.+|.+||++.++++.|+.+
T Consensus       256 li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         256 LMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             HHHHHhccChhhCCCHHHHHHHHHHh
Confidence            99999999999999999999998764


No 24 
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.50  E-value=1.2e-14  Score=99.48  Aligned_cols=88  Identities=28%  Similarity=0.322  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||+|++++++++ |..||.....   ....    .....+......         ......+.
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~~~~----~~~~~~~~~~~~---------~~~~~~~~  254 (280)
T cd05049         191 MPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---EEVI----ECITQGRLLQRP---------RTCPSEVY  254 (280)
T ss_pred             cChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHH----HHHHcCCcCCCC---------CCCCHHHH
Confidence            58999988899999999999999999998 9888643221   1111    111222221111         01123466


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.||++||++.++++.|+
T Consensus       255 ~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         255 DIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHhh
Confidence            7899999999999999999999885


No 25 
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.50  E-value=1.4e-15  Score=103.37  Aligned_cols=87  Identities=31%  Similarity=0.488  Sum_probs=56.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||||+++||+++ |+.||....   .......    ...+......         ......+.
T Consensus       172 ~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~---~~~~~~~----~~~~~~~~~~---------~~~~~~~~  235 (259)
T PF07714_consen  172 LAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD---NEEIIEK----LKQGQRLPIP---------DNCPKDIY  235 (259)
T ss_dssp             S-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC---HHHHHHH----HHTTEETTSB---------TTSBHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccc---ccccccc----ccccccceec---------cchhHHHH
Confidence            58999988889999999999999999999 678864331   1111111    1122111110         11123456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +++..||..+|++||++.++++.|
T Consensus       236 ~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  236 SLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHhcC
Confidence            788899999999999999999875


No 26 
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.49  E-value=1.1e-14  Score=102.61  Aligned_cols=92  Identities=33%  Similarity=0.432  Sum_probs=64.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||+||+++++++ |..||.......      ........+.....         +......+.
T Consensus       242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~  306 (337)
T cd05054         242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE------EFCRRLKEGTRMRA---------PEYATPEIY  306 (337)
T ss_pred             cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH------HHHHHHhccCCCCC---------CccCCHHHH
Confidence            68999988899999999999999999997 888875322111      11111112211110         111224567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|++||++.+|+++|+...
T Consensus       307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         307 SIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            7899999999999999999999998654


No 27 
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.49  E-value=1.1e-14  Score=99.74  Aligned_cols=88  Identities=32%  Similarity=0.368  Sum_probs=61.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++|||+|||+++++++ |..||......       ..............         +......+.
T Consensus       188 ~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~  251 (277)
T cd05036         188 MPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-------EVMEFVTGGGRLDP---------PKGCPGPVY  251 (277)
T ss_pred             CCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHcCCcCCC---------CCCCCHHHH
Confidence            68999988889999999999999999986 88887532211       11111111111110         011124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|++||++.+|++.|+
T Consensus       252 ~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         252 RIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHhh
Confidence            7889999999999999999999886


No 28 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.49  E-value=1.2e-14  Score=103.80  Aligned_cols=91  Identities=29%  Similarity=0.450  Sum_probs=63.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++|||||||+++++++ |+.||.......      ........+......     ..    ....+.
T Consensus       281 ~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~------~~~~~~~~~~~~~~~-----~~----~~~~l~  345 (374)
T cd05106         281 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS------KFYKMVKRGYQMSRP-----DF----APPEIY  345 (374)
T ss_pred             eCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH------HHHHHHHcccCccCC-----CC----CCHHHH
Confidence            68999988889999999999999999997 999975432211      111111111111000     00    124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.||.+||++.+|++.|+.+
T Consensus       346 ~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         346 SIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            788899999999999999999998764


No 29 
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.48  E-value=1.1e-14  Score=100.41  Aligned_cols=92  Identities=26%  Similarity=0.306  Sum_probs=65.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||||++++++++ |+.||.....   ...    ......+......         ......+.
T Consensus       192 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~----~~~~~~~~~~~~~---------~~~~~~~~  255 (291)
T cd05094         192 MPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN---TEV----IECITQGRVLERP---------RVCPKEVY  255 (291)
T ss_pred             cChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHH----HHHHhCCCCCCCC---------ccCCHHHH
Confidence            58999988889999999999999999998 8888643321   111    1112222221111         11234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||+.+|.+||++.+|++.|+.+..
T Consensus       256 ~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         256 DIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            88999999999999999999999988754


No 30 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.48  E-value=2.1e-14  Score=102.59  Aligned_cols=90  Identities=26%  Similarity=0.371  Sum_probs=62.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||||++++++++ |..||......      ......+..+......         ......+.
T Consensus       283 ~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~------~~~~~~~~~~~~~~~~---------~~~~~~l~  347 (375)
T cd05104         283 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD------SKFYKMIKEGYRMLSP---------ECAPSEMY  347 (375)
T ss_pred             eChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch------HHHHHHHHhCccCCCC---------CCCCHHHH
Confidence            58999988899999999999999999997 77886432211      1111222222111100         00123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.||++||++.+|++.|+.
T Consensus       348 ~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         348 DIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHh
Confidence            78899999999999999999999875


No 31 
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.47  E-value=1.6e-14  Score=99.11  Aligned_cols=92  Identities=22%  Similarity=0.243  Sum_probs=64.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++||||||+++||+++ |+.||......       .....+..+......     ..    +...+.
T Consensus       178 ~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~~-----~~----~~~~~~  241 (279)
T cd05111         178 MALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH-------EVPDLLEKGERLAQP-----QI----CTIDVY  241 (279)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-------HHHHHHHCCCcCCCC-----CC----CCHHHH
Confidence            57999888889999999999999999997 88887533211       111112222211110     01    123456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||..+|.+||++.++++.|..+..
T Consensus       242 ~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         242 MVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            68889999999999999999998877553


No 32 
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.47  E-value=2.1e-14  Score=97.37  Aligned_cols=90  Identities=28%  Similarity=0.318  Sum_probs=63.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++....++.++|+||||++++|+++ |..||......   ..    ......+......         ......+.
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~----~~~i~~~~~~~~~---------~~~~~~l~  228 (257)
T cd05116         165 YAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EV----TQMIESGERMECP---------QRCPPEMY  228 (257)
T ss_pred             cCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HH----HHHHHCCCCCCCC---------CCCCHHHH
Confidence            57898887888999999999999999997 88887543211   11    1122222211111         11224566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.||++||++.+|.+.|+..
T Consensus       229 ~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         229 DLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            789999999999999999999998753


No 33 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.47  E-value=5.3e-14  Score=96.75  Aligned_cols=102  Identities=14%  Similarity=0.048  Sum_probs=61.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHH---------HHHhcCCCcchhchhhhccc-
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAW---------KLWNKGMPSQLIDACIQDLC-   70 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-   70 (149)
                      +|||++.+..++.++||||+||+++++++|+.||...........+....         .............+...... 
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (287)
T cd07848         168 RSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQS  247 (287)
T ss_pred             CCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCccc
Confidence            68999988889999999999999999999999986432211111111000         00000000000000000000 


Q ss_pred             -----cHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           71 -----NFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        71 -----~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                           .......+.+++.+||+.||++||++.+++++
T Consensus       248 ~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         248 LERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             HHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                 00112357889999999999999999999864


No 34 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.47  E-value=2.5e-14  Score=103.12  Aligned_cols=88  Identities=17%  Similarity=0.201  Sum_probs=63.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++....|..+.||||+|++.+||+-|.+||-...+.      ..++.. ..+..+++-.+..       -...+.+
T Consensus       436 MAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl------rAlyLI-a~ng~P~lk~~~k-------lS~~~kd  501 (550)
T KOG0578|consen  436 MAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLI-ATNGTPKLKNPEK-------LSPELKD  501 (550)
T ss_pred             cchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH------HHHHHH-hhcCCCCcCCccc-------cCHHHHH
Confidence            8999999999999999999999999999999997432221      122222 2222222221111       1234566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      |+.+||+.|+++|+++.++|++
T Consensus       502 FL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  502 FLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHhhcchhcCCCHHHHhcC
Confidence            7889999999999999999985


No 35 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.46  E-value=2.1e-14  Score=99.11  Aligned_cols=93  Identities=19%  Similarity=0.298  Sum_probs=63.1

Q ss_pred             CCcccccCCccc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++..+... .++||||+||++.||++|+.||..+     .....+..........+.+.+.         -.....
T Consensus       188 maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~~~~P~ip~~---------ls~~a~  253 (313)
T KOG0198|consen  188 MAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGREDSLPEIPDS---------LSDEAK  253 (313)
T ss_pred             cCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhccCCCCCCCcc---------cCHHHH
Confidence            799999863333 5999999999999999999997643     1222233333223322222111         123345


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++..|++.+|.+|||+.+++.+..-..
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence            6788999999999999999998776544


No 36 
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.46  E-value=3.8e-14  Score=96.58  Aligned_cols=90  Identities=22%  Similarity=0.296  Sum_probs=63.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++||||||++++|+++ |..||....   ......    ....+......         ......+.
T Consensus       182 ~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~---~~~~~~----~~~~~~~~~~~---------~~~~~~~~  245 (273)
T cd05035         182 IAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE---NHEIYD----YLRHGNRLKQP---------EDCLDELY  245 (273)
T ss_pred             cCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC---HHHHHH----HHHcCCCCCCC---------cCCCHHHH
Confidence            57888888889999999999999999998 788864322   111111    11122111111         11234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.||.+||++.++++.|+.+
T Consensus       246 ~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         246 DLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            788899999999999999999998764


No 37 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.46  E-value=2.7e-14  Score=97.09  Aligned_cols=90  Identities=29%  Similarity=0.396  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||+||++++++++ |..||.....       .........+......         ......+.
T Consensus       172 ~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~  235 (263)
T cd05052         172 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------SQVYELLEKGYRMERP---------EGCPPKVY  235 (263)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHCCCCCCCC---------CCCCHHHH
Confidence            57998888889999999999999999998 8888653211       1111222222111110         11124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||..+|++||++.++++.|+.+
T Consensus       236 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         236 ELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            788899999999999999999998653


No 38 
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.46  E-value=2.8e-14  Score=96.66  Aligned_cols=90  Identities=31%  Similarity=0.421  Sum_probs=63.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+||||++++++++ |..||.....   ....    ...........         +......+.
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~----~~~~~~~~~~~---------~~~~~~~l~  228 (257)
T cd05060         165 YAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVI----AMLESGERLPR---------PEECPQEIY  228 (257)
T ss_pred             cCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHH----HHHHcCCcCCC---------CCCCCHHHH
Confidence            57999988889999999999999999997 8998753321   1111    11222211111         011123566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||..+|++||++.++++.|...
T Consensus       229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         229 SIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            788899999999999999999998764


No 39 
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.46  E-value=1.3e-13  Score=93.74  Aligned_cols=93  Identities=20%  Similarity=0.251  Sum_probs=64.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|++|++++++++|+.||....    ....... ........+...        .......+.+
T Consensus       173 ~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~----~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~  239 (267)
T cd08228         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLFSLC-QKIEQCDYPPLP--------TEHYSEKLRE  239 (267)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc----ccHHHHH-HHHhcCCCCCCC--------hhhcCHHHHH
Confidence            58999988889999999999999999999999863211    1111111 111121111111        0112245677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ++.+||..+|++||++.++++.++.+
T Consensus       240 li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         240 LVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            88999999999999999999998765


No 40 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.46  E-value=3.3e-14  Score=99.87  Aligned_cols=36  Identities=33%  Similarity=0.549  Sum_probs=33.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      +|||++.+..++.++||||+||+++++++|+.||..
T Consensus       169 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         169 MSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            589999988999999999999999999999999753


No 41 
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.45  E-value=1.8e-14  Score=99.29  Aligned_cols=92  Identities=25%  Similarity=0.278  Sum_probs=64.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|+||||++++++++ |..||.....   ...    ......+.......         .....+.
T Consensus       189 ~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~----~~~i~~~~~~~~~~---------~~~~~l~  252 (288)
T cd05093         189 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEV----IECITQGRVLQRPR---------TCPKEVY  252 (288)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHH----HHHHHcCCcCCCCC---------CCCHHHH
Confidence            58999988889999999999999999998 8888643321   111    11122222111100         1123467


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||+.+|.+||++.+++..|+.+..
T Consensus       253 ~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         253 DLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            79999999999999999999999887663


No 42 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.45  E-value=2.8e-14  Score=97.30  Aligned_cols=89  Identities=26%  Similarity=0.309  Sum_probs=61.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||||||+++++++ |..||.....   ..    .......+.....         +......+.
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---~~----~~~~~~~~~~~~~---------~~~~~~~~~  238 (266)
T cd05064         175 AAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---QD----VIKAVEDGFRLPA---------PRNCPNLLH  238 (266)
T ss_pred             cCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HH----HHHHHHCCCCCCC---------CCCCCHHHH
Confidence            58999988899999999999999999775 9888753211   11    1111222211111         011234566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++..||+.+|++||++.+|++.|..
T Consensus       239 ~li~~c~~~~p~~RP~~~~i~~~l~~  264 (266)
T cd05064         239 QLMLDCWQKERGERPRFSQIHSILSK  264 (266)
T ss_pred             HHHHHHcCCCchhCCCHHHHHHHHHh
Confidence            78889999999999999999998864


No 43 
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.45  E-value=4.9e-14  Score=95.42  Aligned_cols=87  Identities=24%  Similarity=0.400  Sum_probs=60.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|+|+||++++++++ |+.||....   .......    ...+.....  +.       .....+.
T Consensus       168 ~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~---~~~~~~~----i~~~~~~~~--~~-------~~~~~~~  231 (256)
T cd05114         168 SPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS---NYEVVEM----ISRGFRLYR--PK-------LASMTVY  231 (256)
T ss_pred             CChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC---HHHHHHH----HHCCCCCCC--CC-------CCCHHHH
Confidence            58999988889999999999999999999 888864321   1111111    112211100  00       0123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +++.+||+.+|++||++.++++.|
T Consensus       232 ~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         232 EVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHccCCcccCcCHHHHHHhh
Confidence            889999999999999999999876


No 44 
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.45  E-value=4.4e-14  Score=95.86  Aligned_cols=89  Identities=29%  Similarity=0.401  Sum_probs=62.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||+|++++++++ |..||.....   ....    ..+..+......         ......+.
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~----~~~~~~~~~~~~---------~~~~~~~~  234 (261)
T cd05072         171 TAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVM----SALQRGYRMPRM---------ENCPDELY  234 (261)
T ss_pred             CCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHH----HHHHcCCCCCCC---------CCCCHHHH
Confidence            57999888889999999999999999998 8888753211   1111    111122111000         01123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||..+|++||++.++.+.|+.
T Consensus       235 ~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         235 DIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhc
Confidence            78889999999999999999999875


No 45 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.44  E-value=1.5e-13  Score=95.37  Aligned_cols=95  Identities=23%  Similarity=0.266  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhc--ccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSG--KRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++.+..++.++||||||+++++++++  ..||....   .................. ..     ...+..+...+
T Consensus       207 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~  277 (304)
T cd05096         207 MAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT---DEQVIENAGEFFRDQGRQ-VY-----LFRPPPCPQGL  277 (304)
T ss_pred             cCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC---HHHHHHHHHHHhhhcccc-cc-----ccCCCCCCHHH
Confidence            689998888899999999999999999874  45543221   112222222111111000 00     00011223456


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+++.+||+.+|.+||++.+|.+.|+
T Consensus       278 ~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         278 YELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHccCCchhCcCHHHHHHHHh
Confidence            78999999999999999999998875


No 46 
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.44  E-value=3.7e-14  Score=96.61  Aligned_cols=90  Identities=27%  Similarity=0.358  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||+||++++++++ |..||.....       ......+..+.....    .     ......+.
T Consensus       177 ~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-------~~~~~~i~~~~~~~~----~-----~~~~~~~~  240 (268)
T cd05063         177 TAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-------HEVMKAINDGFRLPA----P-----MDCPSAVY  240 (268)
T ss_pred             cCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-------HHHHHHHhcCCCCCC----C-----CCCCHHHH
Confidence            57898888889999999999999999987 8988743221       111122222211100    0     01124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|++||++.+|++.|.++
T Consensus       241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         241 QLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            788999999999999999999998764


No 47 
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.44  E-value=3.2e-14  Score=98.11  Aligned_cols=90  Identities=29%  Similarity=0.361  Sum_probs=63.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||||||+++++++ |..||.....       .........+....         .+......+.
T Consensus       201 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~  264 (293)
T cd05053         201 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-------EELFKLLKEGYRME---------KPQNCTQELY  264 (293)
T ss_pred             cCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-------HHHHHHHHcCCcCC---------CCCCCCHHHH
Confidence            57999888889999999999999999987 8888643211       11112222221111         1111234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||..+|++||++.++++.|+.+
T Consensus       265 ~li~~~l~~~p~~Rps~~eil~~l~~~  291 (293)
T cd05053         265 HLMRDCWHEVPSQRPTFKQLVEDLDRM  291 (293)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHHHh
Confidence            799999999999999999999998764


No 48 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.44  E-value=4e-14  Score=95.64  Aligned_cols=88  Identities=26%  Similarity=0.326  Sum_probs=61.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||.+.++.++.++|||++|++++++++ |..||......       ..............         +......+.
T Consensus       163 ~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~  226 (252)
T cd05084         163 TAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ-------QTREAIEQGVRLPC---------PELCPDAVY  226 (252)
T ss_pred             cCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH-------HHHHHHHcCCCCCC---------cccCCHHHH
Confidence            57999988889999999999999999997 77776432111       11111111111111         111234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|++||++.++++.|+
T Consensus       227 ~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         227 RLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHh
Confidence            7889999999999999999999886


No 49 
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.44  E-value=7.4e-14  Score=94.81  Aligned_cols=89  Identities=33%  Similarity=0.468  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+||||++++++++ |+.||.....   ...    ...+.......         ........+.
T Consensus       171 ~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~~~  234 (261)
T cd05068         171 TAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEV----LQQVDQGYRMP---------CPPGCPKELY  234 (261)
T ss_pred             cCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHH----HHHHHcCCCCC---------CCCcCCHHHH
Confidence            58999988889999999999999999998 8888753221   111    11111111100         0111234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|.+||++.++++.|+.
T Consensus       235 ~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         235 DIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            78899999999999999999999875


No 50 
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.44  E-value=5e-14  Score=96.71  Aligned_cols=89  Identities=25%  Similarity=0.341  Sum_probs=61.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.++.++.++||||+|++++|+++ |..||.....      .. .............         +......+.
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~-~~~~i~~~~~~~~---------~~~~~~~~~  256 (283)
T cd05091         193 MSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN------QD-VIEMIRNRQVLPC---------PDDCPAWVY  256 (283)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH------HH-HHHHHHcCCcCCC---------CCCCCHHHH
Confidence            58999888889999999999999999997 7777643211      11 1111222221111         111223466


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++..||+.+|.+||++.+|+..|+.
T Consensus       257 ~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         257 TLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            78889999999999999999998863


No 51 
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.44  E-value=4.7e-14  Score=96.84  Aligned_cols=88  Identities=26%  Similarity=0.299  Sum_probs=60.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||||||+++++++ |..||.....   .....   . ...+......         ......+.
T Consensus       191 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~---~-~~~~~~~~~~---------~~~~~~~~  254 (280)
T cd05092         191 MPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---TEAIE---C-ITQGRELERP---------RTCPPEVY  254 (280)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---HHHHH---H-HHcCccCCCC---------CCCCHHHH
Confidence            57999888889999999999999999998 8888643221   11111   1 1111111110         01123456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.||.+||++.+|+..|+
T Consensus       255 ~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         255 AIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHHh
Confidence            7888999999999999999999885


No 52 
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.43  E-value=9.7e-14  Score=94.52  Aligned_cols=88  Identities=30%  Similarity=0.422  Sum_probs=61.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.++.++.++|||+||++++++++ |..||.....   ...    ......+.....         .......+.
T Consensus       180 ~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~----~~~~~~~~~~~~---------~~~~~~~~~  243 (269)
T cd05044         180 MAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEV----LQHVTAGGRLQK---------PENCPDKIY  243 (269)
T ss_pred             cCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHH----HHHHhcCCccCC---------cccchHHHH
Confidence            57999988889999999999999999997 8888753221   111    111111111110         011124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||..+|.+||++.++++.|+
T Consensus       244 ~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         244 QLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHHh
Confidence            7888999999999999999999885


No 53 
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.43  E-value=3.3e-13  Score=98.72  Aligned_cols=103  Identities=18%  Similarity=0.207  Sum_probs=65.6

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHH---------------Hhc--CCCcchhch
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKL---------------WNK--GMPSQLIDA   64 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~   64 (149)
                      |||++.|..|+.+.|+|||||+++||++|.+.|......++...+..+...               ...  +.+..+...
T Consensus       356 APEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~  435 (586)
T KOG0667|consen  356 APEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVET  435 (586)
T ss_pred             cchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeee
Confidence            899999999999999999999999999998876644433333333222110               000  000000000


Q ss_pred             --------------------------h---hhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           65 --------------------------C---IQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        65 --------------------------~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                                                .   .........-..+++++++||.+||.+|+|..+.+++-.
T Consensus       436 ~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpf  504 (586)
T KOG0667|consen  436 SAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPF  504 (586)
T ss_pred             cccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcc
Confidence                                      0   000001112245799999999999999999999998644


No 54 
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.43  E-value=2e-13  Score=92.91  Aligned_cols=93  Identities=23%  Similarity=0.230  Sum_probs=62.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|+||++++++++|..||.....    ... ...........+...        .......+.+
T Consensus       173 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~  239 (267)
T cd08229         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLY-SLCKKIEQCDYPPLP--------SDHYSEELRQ  239 (267)
T ss_pred             cCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc----hHH-HHhhhhhcCCCCCCC--------cccccHHHHH
Confidence            579999888899999999999999999999999642111    011 111111111111110        0112345677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ++.+||+.+|.+||++.+|++.+++.
T Consensus       240 li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         240 LVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            88899999999999999999988754


No 55 
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.43  E-value=4e-13  Score=92.19  Aligned_cols=96  Identities=21%  Similarity=0.264  Sum_probs=62.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|+||++++++++|+.||.............................        ......+.+
T Consensus       160 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~  231 (279)
T cd06619         160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPV--------GQFSEKFVH  231 (279)
T ss_pred             cCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCC--------CcCCHHHHH
Confidence            589999888899999999999999999999999754332221111111111111111111100        001234677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ++.+||+.+|++||++.++++...
T Consensus       232 li~~~l~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         232 FITQCMRKQPKERPAPENLMDHPF  255 (279)
T ss_pred             HHHHHhhCChhhCCCHHHHhcCcc
Confidence            888999999999999999987543


No 56 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.42  E-value=4.2e-14  Score=98.69  Aligned_cols=92  Identities=21%  Similarity=0.248  Sum_probs=63.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||++.+..++.++||||||+++||+++ |..||.....   .    ........+.....         +..+...+.
T Consensus       178 ~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~  241 (316)
T cd05108         178 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA---S----EISSILEKGERLPQ---------PPICTIDVY  241 (316)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---H----HHHHHHhCCCCCCC---------CCCCCHHHH
Confidence            58999988889999999999999999987 8888753211   0    11111112111100         011223567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||+.+|.+||++.+++..+.....
T Consensus       242 ~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         242 MIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            78899999999999999999998876653


No 57 
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.42  E-value=1e-13  Score=94.08  Aligned_cols=89  Identities=30%  Similarity=0.457  Sum_probs=62.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|+|+||++++++++ |..||....   .....    ..+..+.....         +......+.
T Consensus       170 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~---~~~~~----~~~~~~~~~~~---------~~~~~~~~~  233 (260)
T cd05070         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN---NREVL----EQVERGYRMPC---------PQDCPISLH  233 (260)
T ss_pred             cChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC---HHHHH----HHHHcCCCCCC---------CCcCCHHHH
Confidence            57998888889999999999999999998 888874321   11111    11112211111         111224577


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||..+|++||++.++...|+.
T Consensus       234 ~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         234 ELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            89999999999999999999998864


No 58 
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42  E-value=2.5e-13  Score=98.77  Aligned_cols=86  Identities=14%  Similarity=0.213  Sum_probs=61.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCC--cchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMP--SQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~   78 (149)
                      +|||++....++..+||||+||++|.++.|++||+...      + ...+..+.....  |..+            ...+
T Consensus       185 IAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~------v-kety~~Ik~~~Y~~P~~l------------s~~A  245 (592)
T KOG0575|consen  185 IAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT------V-KETYNKIKLNEYSMPSHL------------SAEA  245 (592)
T ss_pred             cChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch------H-HHHHHHHHhcCccccccc------------CHHH
Confidence            58999999999999999999999999999999987431      1 111222222211  1110            1234


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      .+|+..+|..||.+||++++|+..-..
T Consensus       246 ~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  246 KDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence            567789999999999999999975443


No 59 
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.42  E-value=5.4e-14  Score=97.32  Aligned_cols=91  Identities=27%  Similarity=0.316  Sum_probs=63.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||+..+..++.++|||||||+++++++ |..||.....   ...    ......+.....         +......+.
T Consensus       185 ~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~~----~~~~~~~~~~~~---------~~~~~~~~~  248 (297)
T cd05089         185 MAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AEL----YEKLPQGYRMEK---------PRNCDDEVY  248 (297)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHH----HHHHhcCCCCCC---------CCCCCHHHH
Confidence            57999888889999999999999999997 8888753221   111    111111111110         011124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|.+||++.++++.|+...
T Consensus       249 ~li~~~l~~~p~~Rp~~~~i~~~l~~~~  276 (297)
T cd05089         249 ELMRQCWRDRPYERPPFAQISVQLSRML  276 (297)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            7899999999999999999999887655


No 60 
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.42  E-value=5.5e-14  Score=95.09  Aligned_cols=88  Identities=30%  Similarity=0.430  Sum_probs=60.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||++|++++++++ |+.||.....   ....    .....+...  ..+.       .....+.
T Consensus       168 ~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~----~~~~~~~~~--~~~~-------~~~~~~~  231 (256)
T cd05112         168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVV----ETINAGFRL--YKPR-------LASQSVY  231 (256)
T ss_pred             cCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHH----HHHhCCCCC--CCCC-------CCCHHHH
Confidence            57999888889999999999999999998 8888643211   1111    111111110  0000       1124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|++||++.++++.|+
T Consensus       232 ~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         232 ELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHcccChhhCCCHHHHHHhhC
Confidence            7899999999999999999999874


No 61 
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.42  E-value=5.4e-14  Score=95.46  Aligned_cols=90  Identities=22%  Similarity=0.238  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||||++++++++ |..||......   .    .......+.....         +......+.
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~----~~~~~~~~~~~~~---------~~~~~~~l~  228 (257)
T cd05115         165 YAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP---E----VMSFIEQGKRLDC---------PAECPPEMY  228 (257)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH---H----HHHHHHCCCCCCC---------CCCCCHHHH
Confidence            57898888889999999999999999986 88887532211   1    1111222221111         111234556


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||..+|++||++.+|.+.|+..
T Consensus       229 ~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         229 ALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            788899999999999999999998754


No 62 
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.42  E-value=6.8e-14  Score=94.90  Aligned_cols=89  Identities=33%  Similarity=0.425  Sum_probs=61.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||+||++++++++ |+.||....   .......    ...+.....         +......+.
T Consensus       171 ~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~---~~~~~~~----~~~~~~~~~---------~~~~~~~~~  234 (261)
T cd05148         171 TAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN---NHEVYDQ----ITAGYRMPC---------PAKCPQEIY  234 (261)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC---HHHHHHH----HHhCCcCCC---------CCCCCHHHH
Confidence            47898888889999999999999999998 788875322   1111111    111111100         111224466


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||..+|.+||++.++++.|+.
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         235 KIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            78889999999999999999999875


No 63 
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.42  E-value=6.4e-14  Score=95.55  Aligned_cols=90  Identities=23%  Similarity=0.285  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||+..+..++.++|||+||++++++++ |+.||....   ..    ........+......         ......+.
T Consensus       181 ~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~---~~----~~~~~~~~~~~~~~~---------~~~~~~~~  244 (272)
T cd05075         181 IAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE---NS----EIYDYLRQGNRLKQP---------PDCLDGLY  244 (272)
T ss_pred             CCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC---HH----HHHHHHHcCCCCCCC---------CCCCHHHH
Confidence            46888888889999999999999999998 778865321   11    112222222211110         01123467


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|++||++.++++.|+..
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         245 SLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            788999999999999999999998753


No 64 
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.42  E-value=7.1e-13  Score=90.07  Aligned_cols=94  Identities=23%  Similarity=0.249  Sum_probs=63.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|++|++++++++|+.||....    ...... ......+.......        ......+.+
T Consensus       173 ~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~  239 (267)
T cd08224         173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSL-CKKIEKCDYPPLPA--------DHYSEELRD  239 (267)
T ss_pred             cCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHH-HhhhhcCCCCCCCh--------hhcCHHHHH
Confidence            47999888889999999999999999999999864221    111111 11111111111110        012235667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      ++.+||..+|++||++.+|++.|+.+.
T Consensus       240 ~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         240 LVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            888999999999999999999997654


No 65 
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.42  E-value=7.8e-14  Score=94.49  Aligned_cols=87  Identities=30%  Similarity=0.429  Sum_probs=60.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+|+||++++++++ |+.||.....   ....    .....+.....         +......+.
T Consensus       168 ~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~----~~~~~~~~~~~---------~~~~~~~~~  231 (256)
T cd05059         168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEVV----ESVSAGYRLYR---------PKLAPTEVY  231 (256)
T ss_pred             cCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHHH----HHHHcCCcCCC---------CCCCCHHHH
Confidence            57898888889999999999999999998 7888753221   1111    11111111100         011234577


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +++.+||..+|++||++.++++.|
T Consensus       232 ~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         232 TIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHh
Confidence            899999999999999999999876


No 66 
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.42  E-value=5.5e-14  Score=96.35  Aligned_cols=91  Identities=24%  Similarity=0.305  Sum_probs=63.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||+|++++++++ |+.||.....   ...    ......+......     .    .....+.
T Consensus       186 ~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~----~~~~~~~~~~~~~-----~----~~~~~~~  249 (280)
T cd05043         186 MALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEM----AAYLKDGYRLAQP-----I----NCPDELF  249 (280)
T ss_pred             cCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHH----HHHHHcCCCCCCC-----C----cCCHHHH
Confidence            58998888889999999999999999998 8888753221   111    1111122111000     0    1123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||..+|++||++.++++.|+.+.
T Consensus       250 ~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         250 AVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            7899999999999999999999987653


No 67 
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.42  E-value=6.4e-14  Score=95.00  Aligned_cols=88  Identities=25%  Similarity=0.375  Sum_probs=60.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||+||++++++++ |..||.....   .....    ....+.......         .....+.
T Consensus       168 ~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~----~~~~~~~~~~~~---------~~~~~~~  231 (256)
T cd05113         168 SPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVE----KVSQGLRLYRPH---------LASEKVY  231 (256)
T ss_pred             CCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHH----HHhcCCCCCCCC---------CCCHHHH
Confidence            47888888889999999999999999998 8888753321   11111    111221111000         1134567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|.+||++.+++..|+
T Consensus       232 ~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         232 AIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHhhC
Confidence            7888999999999999999998764


No 68 
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.42  E-value=3.1e-13  Score=93.28  Aligned_cols=95  Identities=26%  Similarity=0.332  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh--cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS--GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++.+..++.++|||+||++++++++  +..||....   ......................      .+......+
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l  269 (296)
T cd05051         199 MAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT---DQQVIENAGHFFRDDGRQIYLP------RPPNCPKDI  269 (296)
T ss_pred             cCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC---hHHHHHHHHhccccccccccCC------CccCCCHHH
Confidence            58999888889999999999999999987  556653221   1111111111111111000000      011122457


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+++.+||+.||.+||++.+|++.|+
T Consensus       270 ~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         270 YELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHhccChhcCCCHHHHHHHhc
Confidence            78999999999999999999999886


No 69 
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.41  E-value=6.3e-14  Score=95.68  Aligned_cols=90  Identities=24%  Similarity=0.325  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||||++++++++ |..||....   ...    .......+.....         +......+.
T Consensus       178 ~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~---~~~----~~~~~~~~~~~~~---------~~~~~~~~~  241 (270)
T cd05047         178 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT---CAE----LYEKLPQGYRLEK---------PLNCDDEVY  241 (270)
T ss_pred             CChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC---HHH----HHHHHhCCCCCCC---------CCcCCHHHH
Confidence            57998888889999999999999999996 888874221   111    1111111111110         011123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||..+|.+||++.+++..|..+
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            889999999999999999999998764


No 70 
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.41  E-value=1.7e-13  Score=96.41  Aligned_cols=93  Identities=28%  Similarity=0.327  Sum_probs=65.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++|||+||++++|+++ |..||....      . .........+......         ......+.
T Consensus       203 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------~-~~~~~~~~~~~~~~~~---------~~~~~~l~  266 (334)
T cd05100         203 MAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------V-EELFKLLKEGHRMDKP---------ANCTHELY  266 (334)
T ss_pred             cCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------H-HHHHHHHHcCCCCCCC---------CCCCHHHH
Confidence            68999988889999999999999999998 777764321      1 1111222222111110         11123566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCcC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETVL  109 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  109 (149)
                      +++.+||+.+|.+||++.+++..|+.+...
T Consensus       267 ~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         267 MIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            788999999999999999999999887643


No 71 
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.41  E-value=2.5e-13  Score=93.89  Aligned_cols=96  Identities=20%  Similarity=0.227  Sum_probs=60.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh--cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS--GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ++||+..++.++.++|+|||||+++|+++  |..||.....   ................... .+.     +..+...+
T Consensus       199 ~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~  269 (296)
T cd05095         199 MSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD---EQVIENTGEFFRDQGRQVY-LPK-----PALCPDSL  269 (296)
T ss_pred             CCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh---HHHHHHHHHHHhhcccccc-CCC-----CCCCCHHH
Confidence            57888777889999999999999999998  5566532211   1111111111111100000 000     01122456


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      .+++.+||+.||++||++.+|++.|+.
T Consensus       270 ~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         270 YKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            789999999999999999999998863


No 72 
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.41  E-value=5.2e-14  Score=97.03  Aligned_cols=91  Identities=29%  Similarity=0.356  Sum_probs=63.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++||||||++++++++ |..||.....       ..............         .+......+.
T Consensus       196 ~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~  259 (290)
T cd05045         196 MAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-------ERLFNLLKTGYRME---------RPENCSEEMY  259 (290)
T ss_pred             cCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-------HHHHHHHhCCCCCC---------CCCCCCHHHH
Confidence            57888878889999999999999999998 8888643211       11111111111110         0111124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++..||+.+|.+||++.++++.|+.+.
T Consensus       260 ~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         260 NLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            7899999999999999999999998754


No 73 
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.41  E-value=5.1e-13  Score=92.35  Aligned_cols=94  Identities=21%  Similarity=0.278  Sum_probs=60.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh--cccCCCCCCCCcccchHHHHHHHHhcC-CCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS--GKRNRGFYHSDNKLNLIGHAWKLWNKG-MPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||++.+..++.++||||||++++++++  +..||.....   ...+.......... ......       .+......
T Consensus       198 ~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  267 (295)
T cd05097         198 MAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD---EQVIENTGEFFRNQGRQIYLS-------QTPLCPSP  267 (295)
T ss_pred             cChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---HHHHHHHHHhhhhccccccCC-------CCCCCCHH
Confidence            57898888889999999999999999988  4455543221   11111111111110 000000       00011245


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +.+++.+||+.+|++||++.+|++.|+
T Consensus       268 l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         268 VFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            778999999999999999999999886


No 74 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.41  E-value=8.5e-13  Score=93.92  Aligned_cols=104  Identities=16%  Similarity=0.095  Sum_probs=66.8

Q ss_pred             Cccccc-CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc--------------CCCcchhchhh
Q 043384            2 APEYAS-DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK--------------GMPSQLIDACI   66 (149)
Q Consensus         2 apE~~~-~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~   66 (149)
                      |||++. .+-|+.+.|+|++||+++|+.+.++.|......++...+-.+...-..              -..+.+..-.+
T Consensus       177 APEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l  256 (538)
T KOG0661|consen  177 APEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPL  256 (538)
T ss_pred             chHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCCh
Confidence            799975 477999999999999999999999987655443333222222111000              01111111111


Q ss_pred             hccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           67 QDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        67 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ..+.+. ...+++.++.+|+++||++||++.+.+++-...
T Consensus       257 ~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq  295 (538)
T KOG0661|consen  257 KDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPFFQ  295 (538)
T ss_pred             HHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCcccc
Confidence            112221 345788999999999999999999999865443


No 75 
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.41  E-value=1.6e-13  Score=90.54  Aligned_cols=92  Identities=16%  Similarity=0.201  Sum_probs=61.8

Q ss_pred             Cccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            2 APEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         2 apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      |||.+.   +...+.++||||+||++|+|+.|..||+..+..+. ++.-.    +.++.. ....       ...-...+
T Consensus       206 APELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg-SlaLA----v~n~q~-s~P~-------~~~yse~l  272 (302)
T KOG2345|consen  206 APELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG-SLALA----VQNAQI-SIPN-------SSRYSEAL  272 (302)
T ss_pred             CchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC-eEEEe----eecccc-ccCC-------CCCccHHH
Confidence            688774   34577999999999999999999999986554222 11100    001100 0000       00123567


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +.++..|++.||.+||++.+++..++..
T Consensus       273 ~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  273 HQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            7788899999999999999999887654


No 76 
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.41  E-value=4.8e-13  Score=91.97  Aligned_cols=97  Identities=24%  Similarity=0.362  Sum_probs=64.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcc-----cchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNK-----LNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ++||++.+..++.++|+|+|||+++++++|+.||........     ............ ...+...        .....
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------~~~~~  239 (284)
T cd06620         169 MSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-EPPPRLP--------SSDFP  239 (284)
T ss_pred             CCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-ccCCCCC--------chhcC
Confidence            579998888899999999999999999999999864332110     111111111111 1111100        01123


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ..+.+++.+||+.||++||++.+++++...+
T Consensus       240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~  270 (284)
T cd06620         240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFI  270 (284)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence            4567788999999999999999999875443


No 77 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.41  E-value=9.3e-14  Score=95.41  Aligned_cols=89  Identities=29%  Similarity=0.322  Sum_probs=61.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++||||||++++|+++ |..||....   ..    ...............         ......+.
T Consensus       193 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~---~~----~~~~~~~~~~~~~~~---------~~~~~~~~  256 (283)
T cd05090         193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS---NQ----EVIEMVRKRQLLPCS---------EDCPPRMY  256 (283)
T ss_pred             cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC---HH----HHHHHHHcCCcCCCC---------CCCCHHHH
Confidence            57999888889999999999999999998 888864221   11    111111122111110         01123466


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|.+||++.+|++.|..
T Consensus       257 ~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         257 SLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHhhc
Confidence            78889999999999999999998864


No 78 
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.41  E-value=8.8e-14  Score=95.35  Aligned_cols=93  Identities=23%  Similarity=0.220  Sum_probs=64.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||+..+..++.++||||||++++|+++ |..||.....   ...    ...+..+......         ......+.
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~----~~~~~~~~~~~~~---------~~~~~~~~  241 (279)
T cd05109         178 MALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---REI----PDLLEKGERLPQP---------PICTIDVY  241 (279)
T ss_pred             CCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHH----HHHHHCCCcCCCC---------ccCCHHHH
Confidence            57999888889999999999999999987 8888753321   111    1112222111110         01223466


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCcC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETVL  109 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  109 (149)
                      +++.+||+.||++||++.+++..|......
T Consensus       242 ~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         242 MIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence            788899999999999999999988766543


No 79 
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.41  E-value=8.1e-14  Score=95.42  Aligned_cols=88  Identities=27%  Similarity=0.364  Sum_probs=61.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||||++++++++ |..||.....       .........+.......         .....+.
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~~---------~~~~~~~  251 (277)
T cd05062         188 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-------EQVLRFVMEGGLLDKPD---------NCPDMLF  251 (277)
T ss_pred             cChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-------HHHHHHHHcCCcCCCCC---------CCCHHHH
Confidence            68999988889999999999999999998 6777643211       11111122222211111         1123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|++||++.++++.|+
T Consensus       252 ~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         252 ELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHhh
Confidence            7889999999999999999999886


No 80 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.41  E-value=1e-13  Score=94.37  Aligned_cols=90  Identities=26%  Similarity=0.373  Sum_probs=62.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+.+..++.++|||+||++++++++ |..||....   .....    .....+.....         +......+.
T Consensus       175 ~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~---~~~~~----~~~~~~~~~~~---------~~~~~~~l~  238 (266)
T cd05033         175 TAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS---NQDVI----KAVEDGYRLPP---------PMDCPSALY  238 (266)
T ss_pred             cChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC---HHHHH----HHHHcCCCCCC---------CCCCCHHHH
Confidence            57899888889999999999999999987 888864221   11111    11111111100         001124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|++||++.++++.|+.+
T Consensus       239 ~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         239 QLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            889999999999999999999998754


No 81 
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.41  E-value=8.9e-14  Score=94.18  Aligned_cols=89  Identities=27%  Similarity=0.289  Sum_probs=61.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||+||++++++++ |+.||....   .....    .....+......         ......+.
T Consensus       166 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~---~~~~~----~~~~~~~~~~~~---------~~~~~~~~  229 (256)
T cd05082         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---LKDVV----PRVEKGYKMDAP---------DGCPPVVY  229 (256)
T ss_pred             cCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC---HHHHH----HHHhcCCCCCCC---------CCCCHHHH
Confidence            58999988889999999999999999997 888864221   11111    111111111110         11234566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|++||++.++++.|+.
T Consensus       230 ~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         230 DVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            78889999999999999999998865


No 82 
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.41  E-value=6.9e-14  Score=94.92  Aligned_cols=91  Identities=24%  Similarity=0.219  Sum_probs=61.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhc-ccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSG-KRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||||++++|+++| ..||....   .   ...... ...+......         ......+.
T Consensus       169 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~---~~~~~~-~~~~~~~~~~---------~~~~~~~~  232 (262)
T cd05058         169 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---S---FDITVY-LLQGRRLLQP---------EYCPDPLY  232 (262)
T ss_pred             cChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---H---HHHHHH-HhcCCCCCCC---------CcCCHHHH
Confidence            579988888899999999999999999995 55543211   1   111111 1111111100         01123566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++..||+.+|++||++.++++.|+...
T Consensus       233 ~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         233 EVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            7889999999999999999999987653


No 83 
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.40  E-value=1e-13  Score=95.45  Aligned_cols=89  Identities=25%  Similarity=0.294  Sum_probs=61.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||||||+++++++ |..||.....      .. .......+......         ......+.
T Consensus       199 ~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~------~~-~~~~~~~~~~~~~~---------~~~~~~l~  262 (288)
T cd05050         199 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH------EE-VIYYVRDGNVLSCP---------DNCPLELY  262 (288)
T ss_pred             cCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHhcCCCCCCC---------CCCCHHHH
Confidence            57898888889999999999999999987 7777532211      11 11122222221110         01124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|++||++.++++.|+.
T Consensus       263 ~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         263 NLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHhhC
Confidence            78999999999999999999998863


No 84 
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.40  E-value=1.1e-13  Score=96.05  Aligned_cols=91  Identities=27%  Similarity=0.420  Sum_probs=62.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||+|++++++++ |..||......      .........+.....         +......+.
T Consensus       210 ~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~---------~~~~~~~~~  274 (302)
T cd05055         210 MAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD------SKFYKLIKEGYRMAQ---------PEHAPAEIY  274 (302)
T ss_pred             CCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch------HHHHHHHHcCCcCCC---------CCCCCHHHH
Confidence            57999888889999999999999999997 88886533211      111111222211110         001123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||..+|++||++.++++.|+..
T Consensus       275 ~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         275 DIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            788999999999999999999998753


No 85 
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.40  E-value=1.2e-13  Score=99.52  Aligned_cols=92  Identities=27%  Similarity=0.330  Sum_probs=63.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||||++++++++ |..||.......      ........+.....         +......+.
T Consensus       306 ~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~------~~~~~~~~~~~~~~---------~~~~~~~l~  370 (400)
T cd05105         306 MAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS------TFYNKIKSGYRMAK---------PDHATQEVY  370 (400)
T ss_pred             EChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH------HHHHHHhcCCCCCC---------CccCCHHHH
Confidence            58999988889999999999999999986 888865321111      11111122211110         111234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|++||++.+|.+.|+...
T Consensus       371 ~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         371 DIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            7899999999999999999999987643


No 86 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.40  E-value=1.1e-13  Score=100.80  Aligned_cols=100  Identities=12%  Similarity=0.069  Sum_probs=60.9

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc---------------CCCcchhch
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK---------------GMPSQLIDA   64 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~   64 (149)
                      ||||++.+. .|+.++||||+||+++||++|..||.......   ....+......               -..+.....
T Consensus       237 ~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~---~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  313 (440)
T PTZ00036        237 RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD---QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPK  313 (440)
T ss_pred             cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCCHHHHHHhchhhhcccCCccCch
Confidence            689988664 68999999999999999999999975322111   11111111000               000000000


Q ss_pred             hhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           65 CIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ......+......+++|+.+||..||.+|+++.+++++-
T Consensus       314 ~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp  352 (440)
T PTZ00036        314 DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP  352 (440)
T ss_pred             hHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence            011111111234678899999999999999999999753


No 87 
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.40  E-value=2.3e-13  Score=92.64  Aligned_cols=86  Identities=21%  Similarity=0.352  Sum_probs=57.3

Q ss_pred             CCccccc-CCccccCCcchhhhHhHHHHH-hcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYAS-DGQFSVKSDVFSFGVLLLEIV-SGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~-~~~~~~~~dv~s~g~~l~e~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++. +..++.++|||+||+++|+++ .|..|+.....      .. ..... ..... ..         ......+
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~-~~~~~-~~~~~-~~---------~~~~~~~  236 (262)
T cd05077         175 IAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL------AE-KERFY-EGQCM-LV---------TPSCKEL  236 (262)
T ss_pred             cChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch------hH-HHHHH-hcCcc-CC---------CCChHHH
Confidence            6899886 466889999999999999997 47777542211      00 01111 11110 00         0112356


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+++.+||+.||.+||++.+|++.+.
T Consensus       237 ~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         237 ADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            77899999999999999999998763


No 88 
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.40  E-value=1.6e-13  Score=93.12  Aligned_cols=89  Identities=29%  Similarity=0.398  Sum_probs=62.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+|+||++++++++ |+.||....   ....    ...+..+......         ......+.
T Consensus       170 ~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---~~~~----~~~~~~~~~~~~~---------~~~~~~~~  233 (260)
T cd05067         170 TAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT---NPEV----IQNLERGYRMPRP---------DNCPEELY  233 (260)
T ss_pred             cCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC---hHHH----HHHHHcCCCCCCC---------CCCCHHHH
Confidence            57888888888999999999999999998 899875321   1111    1111122111110         11123577


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||..+|++||++.+++..|+.
T Consensus       234 ~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         234 ELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHhhc
Confidence            78899999999999999999998864


No 89 
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.40  E-value=1.2e-13  Score=93.21  Aligned_cols=88  Identities=27%  Similarity=0.311  Sum_probs=61.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||+||++++++++ |..||.....   .    ........+.....         +......+.
T Consensus       161 ~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~  224 (250)
T cd05085         161 TAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN---Q----QAREQVEKGYRMSC---------PQKCPDDVY  224 (250)
T ss_pred             cCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH---H----HHHHHHHcCCCCCC---------CCCCCHHHH
Confidence            57999988889999999999999999998 8888743211   1    11111111111111         011234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||..+|++||++.++++.|.
T Consensus       225 ~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         225 KVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHhc
Confidence            7899999999999999999999875


No 90 
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.40  E-value=1.9e-13  Score=92.21  Aligned_cols=88  Identities=25%  Similarity=0.351  Sum_probs=60.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+.+..++.++|+|++|++++++++ |..||......       .............         .+......+.
T Consensus       162 ~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~  225 (251)
T cd05041         162 TAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-------QTRERIESGYRMP---------APQLCPEEIY  225 (251)
T ss_pred             CChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-------HHHHHHhcCCCCC---------CCccCCHHHH
Confidence            47898888889999999999999999998 77776433211       1111111111000         0111234577


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||..+|++||++.++++.|+
T Consensus       226 ~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         226 RLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHhh
Confidence            7899999999999999999999885


No 91 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.40  E-value=1.1e-13  Score=95.22  Aligned_cols=99  Identities=14%  Similarity=0.146  Sum_probs=60.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcch---h---chhh--hccccH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQL---I---DACI--QDLCNF   72 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~--~~~~~~   72 (149)
                      +|||++.+..++.++||||+||+++++++|+.||.....   ......+............   .   ....  ....+.
T Consensus       176 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (290)
T cd07862         176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD---VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  252 (290)
T ss_pred             cChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH---HHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCH
Confidence            589999888899999999999999999999998753321   1111111111000000000   0   0000  000000


Q ss_pred             H-----HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           73 A-----EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        73 ~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .     ....+.+++.+||+.||++||++.+++++
T Consensus       253 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         253 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             HHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            0     12345689999999999999999999864


No 92 
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.40  E-value=1.9e-13  Score=92.74  Aligned_cols=86  Identities=22%  Similarity=0.302  Sum_probs=56.9

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcc-cCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGK-RNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++.+. .++.++||||||++++++++|. .|+......      ............+            ......+
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~------------~~~~~~~  232 (258)
T cd05078         171 VPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------KKLQFYEDRHQLP------------APKWTEL  232 (258)
T ss_pred             cCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH------HHHHHHHccccCC------------CCCcHHH
Confidence            689998764 5789999999999999999984 554322111      1111000011111            1112346


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+++.+||+.+|++||++.++++.|+
T Consensus       233 ~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         233 ANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHhcC
Confidence            67888999999999999999998874


No 93 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.39  E-value=4.1e-13  Score=92.45  Aligned_cols=89  Identities=15%  Similarity=0.178  Sum_probs=59.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++||||+||+++++++|+.||.......   ............. ..         ........+.+
T Consensus       168 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~-~~---------~~~~~s~~~~~  234 (285)
T cd05631         168 MAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV---KREEVDRRVKEDQ-EE---------YSEKFSEDAKS  234 (285)
T ss_pred             cCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch---hHHHHHHHhhccc-cc---------CCccCCHHHHH
Confidence            68999999999999999999999999999999976432211   1111111111110 00         00111234667


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~~  102 (149)
                      |+.+||..||.+|++     +.+++++
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         235 ICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             HHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            888999999999997     7888864


No 94 
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.39  E-value=1.2e-13  Score=95.93  Aligned_cols=91  Identities=24%  Similarity=0.326  Sum_probs=62.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||||++++++++ |..||.....   .    ........+.....         +......+.
T Consensus       190 ~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~----~~~~~~~~~~~~~~---------~~~~~~~~~  253 (303)
T cd05088         190 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---A----ELYEKLPQGYRLEK---------PLNCDDEVY  253 (303)
T ss_pred             cCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh---H----HHHHHHhcCCcCCC---------CCCCCHHHH
Confidence            57898877788999999999999999997 8888743211   1    11111111111100         011123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|++||++.++++.|+.+.
T Consensus       254 ~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         254 DLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            7899999999999999999999887654


No 95 
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.39  E-value=8.6e-13  Score=90.43  Aligned_cols=97  Identities=25%  Similarity=0.317  Sum_probs=63.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCccc--------chHHHHHHHHhcCCCcchhchhhhccccH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKL--------NLIGHAWKLWNKGMPSQLIDACIQDLCNF   72 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (149)
                      ++||++.+..++.++|+|+||++++++++|..|+.........        ................         ..+.
T Consensus       179 ~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  249 (284)
T cd05038         179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERL---------PRPP  249 (284)
T ss_pred             cCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcC---------CCCc
Confidence            4688888788899999999999999999999885422111100        0011111111111100         0011


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           73 AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        73 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      .+...+.+++.+||..+|++||++.+|+++|+.+
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         250 SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            1224577899999999999999999999999765


No 96 
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.39  E-value=2.3e-13  Score=92.58  Aligned_cols=90  Identities=28%  Similarity=0.406  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||+..+..++.++|||++|++++++++ |..||.....   ...    ......+....         ........+.
T Consensus       170 ~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~---~~~----~~~~~~~~~~~---------~~~~~~~~l~  233 (262)
T cd05071         170 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---REV----LDQVERGYRMP---------CPPECPESLH  233 (262)
T ss_pred             cCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh---HHH----HHHHhcCCCCC---------CccccCHHHH
Confidence            57898888889999999999999999999 7777643211   111    11111111110         1112234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|.+||++.++++.|+..
T Consensus       234 ~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         234 DLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            899999999999999999999998753


No 97 
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.39  E-value=9.1e-13  Score=89.02  Aligned_cols=86  Identities=21%  Similarity=0.297  Sum_probs=60.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|+||++++++++|+.||....   .    .........+..+....         .....+.+
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~----~~~~~~~~~~~~~~~~~---------~~~~~~~~  231 (256)
T cd08529         168 LSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---Q----GALILKIIRGVFPPVSQ---------MYSQQLAQ  231 (256)
T ss_pred             cCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---H----HHHHHHHHcCCCCCCcc---------ccCHHHHH
Confidence            57999988889999999999999999999999975332   1    11111111221111110         11235677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.++++.
T Consensus       232 ~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         232 LIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHccCCcccCcCHHHHhhC
Confidence            8889999999999999999864


No 98 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.39  E-value=6.9e-13  Score=93.35  Aligned_cols=36  Identities=33%  Similarity=0.546  Sum_probs=32.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      +|||++.+..++.++|||||||+++++++|+.||..
T Consensus       169 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             cCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            589999888899999999999999999999999753


No 99 
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.38  E-value=5.1e-13  Score=91.54  Aligned_cols=87  Identities=21%  Similarity=0.282  Sum_probs=60.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|..||.......       .......+..+         .........+.+
T Consensus       168 ~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-------~~~~~~~~~~~---------~~~~~~~~~~~~  231 (277)
T cd06640         168 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-------VLFLIPKNNPP---------TLTGEFSKPFKE  231 (277)
T ss_pred             cCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-------HhhhhhcCCCC---------CCchhhhHHHHH
Confidence            57999888889999999999999999999999875322110       01111111111         111223445678


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+||+.+|++||++.+++++.
T Consensus       232 li~~~l~~~p~~Rp~~~~il~~~  254 (277)
T cd06640         232 FIDACLNKDPSFRPTAKELLKHK  254 (277)
T ss_pred             HHHHHcccCcccCcCHHHHHhCh
Confidence            89999999999999999998753


No 100
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.38  E-value=2.7e-13  Score=92.43  Aligned_cols=89  Identities=19%  Similarity=0.241  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||+++|++++|+.||....   .....    .....+.......        ......+.+
T Consensus       180 ~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~---~~~~~----~~~~~~~~~~~~~--------~~~~~~l~~  244 (269)
T cd08528         180 SCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN---MLSLA----TKIVEAVYEPLPE--------GMYSEDVTD  244 (269)
T ss_pred             cChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC---HHHHH----HHHhhccCCcCCc--------ccCCHHHHH
Confidence            47999988889999999999999999999999864221   11111    1111111111100        011245677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ++.+||+.||++||++.++..++.
T Consensus       245 li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         245 VITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHCCCCCccCCCHHHHHHHhc
Confidence            888999999999999999998875


No 101
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.38  E-value=8.7e-13  Score=90.15  Aligned_cols=87  Identities=23%  Similarity=0.379  Sum_probs=60.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|||+||++++++++|..||......   ..    .........+.....        .....+.+
T Consensus       165 ~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~---~~----~~~~~~~~~~~~~~~--------~~~~~~~~  229 (274)
T cd06609         165 MAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM---RV----LFLIPKNNPPSLEGN--------KFSKPFKD  229 (274)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH---HH----HHHhhhcCCCCCccc--------ccCHHHHH
Confidence            5799998888999999999999999999999997543211   11    111112222111111        02234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.+++++
T Consensus       230 ~l~~~l~~~p~~Rpt~~~il~~  251 (274)
T cd06609         230 FVSLCLNKDPKERPSAKELLKH  251 (274)
T ss_pred             HHHHHhhCChhhCcCHHHHhhC
Confidence            8889999999999999999874


No 102
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.38  E-value=2.4e-13  Score=91.85  Aligned_cols=88  Identities=22%  Similarity=0.292  Sum_probs=58.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|||+||++++++++|+.||........      . ...........     .  .+......+.+
T Consensus       166 ~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~------~-~~~~~~~~~~~-----~--~~~~~~~~~~~  231 (256)
T cd06612         166 MAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA------I-FMIPNKPPPTL-----S--DPEKWSPEFND  231 (256)
T ss_pred             cCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh------h-hhhccCCCCCC-----C--chhhcCHHHHH
Confidence            579998888899999999999999999999999753322110      0 00000000000     0  00111235677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.+++++
T Consensus       232 ~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         232 FVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             HHHHHHhcChhhCcCHHHHhcC
Confidence            8889999999999999999864


No 103
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.38  E-value=1.2e-12  Score=89.50  Aligned_cols=88  Identities=30%  Similarity=0.421  Sum_probs=61.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||+||++++++++ |..||.....   ...    ......+.......         .....+.
T Consensus       188 ~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~----~~~~~~~~~~~~~~---------~~~~~~~  251 (277)
T cd05032         188 MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEV----LKFVIDGGHLDLPE---------NCPDKLL  251 (277)
T ss_pred             cCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHH----HHHHhcCCCCCCCC---------CCCHHHH
Confidence            57999888889999999999999999998 8888643211   111    11122221111111         1134567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|++||++.+++..|+
T Consensus       252 ~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         252 ELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHhc
Confidence            7899999999999999999999886


No 104
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.38  E-value=3.1e-13  Score=91.44  Aligned_cols=89  Identities=27%  Similarity=0.303  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||++|++++++++ |..||.....      ................         +......+.
T Consensus       167 ~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~------~~~~~~~~~~~~~~~~---------~~~~~~~~~  231 (257)
T cd05040         167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG------SQILKKIDKEGERLER---------PEACPQDIY  231 (257)
T ss_pred             cCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHhcCCcCCC---------CccCCHHHH
Confidence            57898888889999999999999999998 9998743211      1111111111111000         011234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||+.+|.+||++.++++.|.
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHHHhc
Confidence            7899999999999999999998874


No 105
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.38  E-value=1.4e-13  Score=95.94  Aligned_cols=92  Identities=25%  Similarity=0.316  Sum_probs=64.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||++.+..++.++|||+||++++++++ |..||.....       .........+.....         +......+.
T Consensus       203 ~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~l~  266 (314)
T cd05099         203 MAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-------EELFKLLREGHRMDK---------PSNCTHELY  266 (314)
T ss_pred             cCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCCCC---------CCCCCHHHH
Confidence            68999888889999999999999999998 7787643211       111111222211111         111123556


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||..+|++||++.++++.|+....
T Consensus       267 ~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         267 MLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            78889999999999999999999987653


No 106
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.38  E-value=2.5e-13  Score=92.25  Aligned_cols=89  Identities=28%  Similarity=0.423  Sum_probs=61.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||+..+..++.++|+|++|++++++++ |..||....   .....    .....+.....         +......+.
T Consensus       170 ~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~----~~~~~~~~~~~---------~~~~~~~~~  233 (260)
T cd05069         170 TAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV---NREVL----EQVERGYRMPC---------PQGCPESLH  233 (260)
T ss_pred             CCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC---HHHHH----HHHHcCCCCCC---------CcccCHHHH
Confidence            57888888888999999999999999998 888864321   11111    11111211110         011234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|++||++.++++.|+.
T Consensus       234 ~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         234 ELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhc
Confidence            78889999999999999999999864


No 107
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.38  E-value=1.5e-13  Score=95.43  Aligned_cols=92  Identities=26%  Similarity=0.309  Sum_probs=63.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++|||+||++++++++ |..||....      . .........+.....         +......+.
T Consensus       206 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------~-~~~~~~~~~~~~~~~---------~~~~~~~~~  269 (304)
T cd05101         206 MAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------V-EELFKLLKEGHRMDK---------PANCTNELY  269 (304)
T ss_pred             eCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------H-HHHHHHHHcCCcCCC---------CCCCCHHHH
Confidence            58999988889999999999999999998 677754221      1 111122222211111         111234566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||+.+|.+||++.++++.|..+..
T Consensus       270 ~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         270 MMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            78889999999999999999999987653


No 108
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.38  E-value=2.2e-13  Score=92.15  Aligned_cols=89  Identities=28%  Similarity=0.306  Sum_probs=61.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++....++.++|+|+||++++++++ |+.||....   ...    .......+.....         +......+.
T Consensus       166 ~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~---~~~----~~~~~~~~~~~~~---------~~~~~~~~~  229 (256)
T cd05039         166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---LKD----VVPHVEKGYRMEA---------PEGCPPEVY  229 (256)
T ss_pred             cCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC---HHH----HHHHHhcCCCCCC---------ccCCCHHHH
Confidence            47999888889999999999999999997 888864321   111    1111111111111         011134567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||..+|++||++.++++.|+.
T Consensus       230 ~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         230 KVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHHhc
Confidence            78889999999999999999999865


No 109
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.38  E-value=7.4e-14  Score=95.91  Aligned_cols=97  Identities=24%  Similarity=0.308  Sum_probs=60.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCC--------cc-cchHHHHHHHHhcCCCcchhchhhhcccc
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSD--------NK-LNLIGHAWKLWNKGMPSQLIDACIQDLCN   71 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (149)
                      ++||++.+..++.++|+|+||++++|+++|..++......        .. .................         ..+
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  248 (284)
T cd05081         178 YAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRL---------PAP  248 (284)
T ss_pred             eCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcC---------CCC
Confidence            4789988888999999999999999999986653211000        00 00000000001010000         000


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           72 FAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        72 ~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ......+.+++.+||..+|++||++.+|++.|+.+
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         249 PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            11224577899999999999999999999998754


No 110
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.37  E-value=3e-13  Score=93.05  Aligned_cols=99  Identities=13%  Similarity=0.057  Sum_probs=59.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc---CCCcch-------hchhhh---
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK---GMPSQL-------IDACIQ---   67 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------~~~~~~---   67 (149)
                      +|||++.+..++.++||||+||+++++++|+.+|......   .....+......   ...+..       ......   
T Consensus       174 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (288)
T cd07863         174 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA---DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPV  250 (288)
T ss_pred             cCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH---HHHHHHHHHhCCCChhhCcccccccccccCCCCCCch
Confidence            5899998888999999999999999999999887432211   111111111000   000000       000000   


Q ss_pred             ccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 DLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..........+.+++.+||+.||++||++.+++.+
T Consensus       251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         251 QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            00000112356789999999999999999999864


No 111
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.37  E-value=6.9e-13  Score=91.77  Aligned_cols=91  Identities=15%  Similarity=0.088  Sum_probs=61.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHH----HHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAW----KLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      +|||+..+..++.++||||+||+++++++|+.||........  ......    .....+...      .     .....
T Consensus       200 ~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~-----~~~~~  266 (294)
T PHA02882        200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN--LIHAAKCDFIKRLHEGKIK------I-----KNANK  266 (294)
T ss_pred             cCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH--HHHHhHHHHHHHhhhhhhc------c-----CCCCH
Confidence            578888888899999999999999999999999864422111  111111    111111000      0     01124


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+.+++..||..+|++||++.++++.+.
T Consensus       267 ~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        267 FIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            4667888999999999999999998763


No 112
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.37  E-value=4.3e-13  Score=91.84  Aligned_cols=86  Identities=22%  Similarity=0.350  Sum_probs=59.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|||+||++++++++|+.|+.......   .    ......+..+..         .......+.+
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~----~~~~~~~~~~~~---------~~~~~~~~~~  231 (277)
T cd06642         168 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR---V----LFLIPKNSPPTL---------EGQYSKPFKE  231 (277)
T ss_pred             cCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh---H----HhhhhcCCCCCC---------CcccCHHHHH
Confidence            57999888889999999999999999999999864322111   0    011111111111         1112244667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.+++++
T Consensus       232 li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         232 FVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHccCCcccCcCHHHHHHh
Confidence            8889999999999999999984


No 113
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.37  E-value=2.6e-13  Score=92.60  Aligned_cols=87  Identities=20%  Similarity=0.274  Sum_probs=57.0

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      +|||++.     +..|+.++|||++||+++++++|+.||......      ..... ..........        .....
T Consensus       178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~------~~~~~-~~~~~~~~~~--------~~~~~  242 (272)
T cd06637         178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM------RALFL-IPRNPAPRLK--------SKKWS  242 (272)
T ss_pred             cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH------HHHHH-HhcCCCCCCC--------CCCcC
Confidence            5788875     345888999999999999999999987432211      01111 1111111110        01112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.+++.+||..+|.+||++.+++++
T Consensus       243 ~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         243 KKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            356788999999999999999999864


No 114
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.37  E-value=1.5e-13  Score=95.51  Aligned_cols=91  Identities=27%  Similarity=0.313  Sum_probs=63.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..++.++||||+|++++++++ |..||....       ..........+......         ......+.
T Consensus       209 ~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-------~~~~~~~~~~~~~~~~~---------~~~~~~~~  272 (307)
T cd05098         209 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-------VEELFKLLKEGHRMDKP---------SNCTNELY  272 (307)
T ss_pred             eChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-------HHHHHHHHHcCCCCCCC---------CcCCHHHH
Confidence            68999888889999999999999999998 777764221       11111222222111110         01123556


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|.+||++.++++.|+.+.
T Consensus       273 ~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         273 MMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            7888999999999999999999998765


No 115
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.37  E-value=1.8e-12  Score=90.94  Aligned_cols=100  Identities=20%  Similarity=0.294  Sum_probs=59.7

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHH----------------HHhcC------
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWK----------------LWNKG------   56 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~----------------~~~~~------   56 (149)
                      |+||++.+  ..++.++|||++||+++++++|+.||.......  ........                .....      
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (328)
T cd08226         175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--MLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDS  252 (328)
T ss_pred             cChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--HHHHHhcCCCCCCccccccchhhhhhccchhhhhc
Confidence            57998866  347899999999999999999999975332110  00000000                00000      


Q ss_pred             -C---------CcchhchhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           57 -M---------PSQLIDACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        57 -~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       .         ....................+.+|+.+||..||++||++.+++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         253 GIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             ccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence             0         000000000001112234568899999999999999999999874


No 116
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.37  E-value=1.3e-12  Score=93.94  Aligned_cols=102  Identities=12%  Similarity=0.138  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhc-------hh-------h
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLID-------AC-------I   66 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-------~   66 (149)
                      +|||++.+..|+.++||||+||+++++++|+.||..............+....... +.....       ..       .
T Consensus       254 ~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  332 (392)
T PHA03207        254 NSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVH-PLEFPQNGSTNLCKHFKQYAIVL  332 (392)
T ss_pred             cCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccC-ccccCCccchhHHHHHHhhcccc
Confidence            58999988899999999999999999999999975433222111111111111100 000000       00       0


Q ss_pred             hcccc-------HHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           67 QDLCN-------FAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        67 ~~~~~-------~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .....       ......+..++.+||..||++||++.+++.+-
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p  376 (392)
T PHA03207        333 RPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP  376 (392)
T ss_pred             cCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence            00000       01123466788899999999999999999753


No 117
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.37  E-value=4e-13  Score=91.22  Aligned_cols=89  Identities=30%  Similarity=0.452  Sum_probs=61.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+|+||++++++++ |..||....   .....    .....+......         ......+.
T Consensus       170 ~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~---~~~~~----~~~~~~~~~~~~---------~~~~~~~~  233 (260)
T cd05073         170 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS---NPEVI----RALERGYRMPRP---------ENCPEELY  233 (260)
T ss_pred             cCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC---HHHHH----HHHhCCCCCCCc---------ccCCHHHH
Confidence            47898888888999999999999999998 888875321   11111    111122111110         11124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|++||++.+++..|+.
T Consensus       234 ~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         234 NIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            78889999999999999999999864


No 118
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.36  E-value=2.4e-12  Score=91.41  Aligned_cols=100  Identities=12%  Similarity=0.066  Sum_probs=61.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHH-------------------HhcC-CCcc
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKL-------------------WNKG-MPSQ   60 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------~~~~-~~~~   60 (149)
                      +|||++.+..++.++||||+||+++++++|+.||.......   ........                   .... ....
T Consensus       189 ~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (359)
T cd07876         189 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHID---QWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG  265 (359)
T ss_pred             CCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCC
Confidence            68999999899999999999999999999999986432111   00000000                   0000 0000


Q ss_pred             hh-chhhhc-------cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           61 LI-DACIQD-------LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        61 ~~-~~~~~~-------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .. ......       .........+.+|+.+||..||++||++.+++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  316 (359)
T cd07876         266 ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP  316 (359)
T ss_pred             cchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence            00 000000       00001123567899999999999999999999854


No 119
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.36  E-value=1.7e-13  Score=98.66  Aligned_cols=91  Identities=24%  Similarity=0.325  Sum_probs=62.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||++.+..++.++|||+||++++|+++ |..||......      .........+.....         +......+.
T Consensus       308 ~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~------~~~~~~~~~~~~~~~---------p~~~~~~l~  372 (401)
T cd05107         308 MAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN------EQFYNAIKRGYRMAK---------PAHASDEIY  372 (401)
T ss_pred             eChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch------HHHHHHHHcCCCCCC---------CCCCCHHHH
Confidence            57898888889999999999999999997 78886532211      111111112211110         011124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|.+||++.+|++.|+..
T Consensus       373 ~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         373 EIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            788899999999999999999998764


No 120
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.36  E-value=2.2e-12  Score=87.16  Aligned_cols=88  Identities=35%  Similarity=0.433  Sum_probs=61.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||.+....++.++|||++|++++++++ |..||....   ....    ......+.....         +......+.
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~---~~~~----~~~~~~~~~~~~---------~~~~~~~~~  237 (262)
T cd00192         174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS---NEEV----LEYLRKGYRLPK---------PEYCPDELY  237 (262)
T ss_pred             cCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC---HHHH----HHHHHcCCCCCC---------CccCChHHH
Confidence            57998888889999999999999999998 588875431   1111    111211111111         111134567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||..+|.+||++.+++..|+
T Consensus       238 ~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         238 ELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHccCCcccCcCHHHHHHhhC
Confidence            7888999999999999999998874


No 121
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.36  E-value=5e-13  Score=91.69  Aligned_cols=87  Identities=21%  Similarity=0.303  Sum_probs=56.9

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      +|||++.     +..++.++|+|++|++++++++|..||.......      .... ...........        ....
T Consensus       188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~------~~~~-~~~~~~~~~~~--------~~~~  252 (282)
T cd06636         188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR------ALFL-IPRNPPPKLKS--------KKWS  252 (282)
T ss_pred             cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh------hhhh-HhhCCCCCCcc--------cccC
Confidence            5788875     3468889999999999999999999974322110      0011 11111111110        0112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.+++.+||..||.+||++.+++++
T Consensus       253 ~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         253 KKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             HHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            356778899999999999999999864


No 122
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.36  E-value=1.6e-13  Score=96.36  Aligned_cols=97  Identities=19%  Similarity=0.248  Sum_probs=58.7

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchh------------h
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDAC------------I   66 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~   66 (149)
                      +|||++.+  ..++.++||||+||+++++++|+.||........   ...+...  .+.+.......            .
T Consensus       173 ~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~---~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~  247 (338)
T cd07859         173 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ---LDLITDL--LGTPSPETISRVRNEKARRYLSSM  247 (338)
T ss_pred             CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHH--hCCCCHHHHHHhhhhhHHHHHHhh
Confidence            58998865  6788999999999999999999999754321111   1111000  00000000000            0


Q ss_pred             h--ccccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           67 Q--DLCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        67 ~--~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .  .....     .....+.+++.+||..||++||++.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         248 RKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             cccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0  00000     012346789999999999999999999975


No 123
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.36  E-value=2.3e-13  Score=99.22  Aligned_cols=95  Identities=22%  Similarity=0.316  Sum_probs=65.6

Q ss_pred             CCcccccC---CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCC-cchhchhhhccccHHHHH
Q 043384            1 MAPEYASD---GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMP-SQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~---~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||++..   ..|+..+|||+||+++|||++|..||. ....+.      +..++-.|.+ ++..      ...-.+..
T Consensus       557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dq------IifmVGrG~l~pd~s------~~~s~~pk  623 (678)
T KOG0193|consen  557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQ------IIFMVGRGYLMPDLS------KIRSNCPK  623 (678)
T ss_pred             hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhh------eEEEecccccCccch------hhhccCHH
Confidence            79999864   569999999999999999999999986 222111      1111111211 1111      11123345


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      .+.+|+..||..++++||.+.+|+..|..+..
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence            67788899999999999999999997776654


No 124
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.36  E-value=4.3e-13  Score=96.92  Aligned_cols=95  Identities=29%  Similarity=0.410  Sum_probs=66.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||.+..+.|+.++|||+|||++||+++ |..||.....   ..+..   +...++......         ...+..+.
T Consensus       329 LAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~---~~v~~---kI~~~~~r~~~~---------~~~p~~~~  393 (474)
T KOG0194|consen  329 LAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN---YEVKA---KIVKNGYRMPIP---------SKTPKELA  393 (474)
T ss_pred             cChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH---HHHHH---HHHhcCccCCCC---------CCCHHHHH
Confidence            68999999999999999999999999987 7778653321   11111   111222221111         12234455


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCcCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETVLS  110 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  110 (149)
                      .++..||..+|++||+|.++.+.++.+....
T Consensus       394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~  424 (474)
T KOG0194|consen  394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKK  424 (474)
T ss_pred             HHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence            6777999999999999999999998876443


No 125
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.36  E-value=7.9e-13  Score=90.99  Aligned_cols=91  Identities=24%  Similarity=0.354  Sum_probs=60.2

Q ss_pred             CCcccccCC---ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDG---QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~---~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||++.+.   .++.++|||++|++++++++|+.||....     .......... .+..+....     .........
T Consensus       174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~  242 (288)
T cd06616         174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVV-KGDPPILSN-----SEEREFSPS  242 (288)
T ss_pred             cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhc-CCCCCcCCC-----cCCCccCHH
Confidence            578988765   68899999999999999999999975332     1111111111 111111111     000112345


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +.+|+.+||+.+|++||++.+|+..
T Consensus       243 l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         243 FVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcC
Confidence            6788999999999999999999974


No 126
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.36  E-value=4e-13  Score=97.96  Aligned_cols=98  Identities=23%  Similarity=0.276  Sum_probs=68.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh--cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS--GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||+|.+.-++|++++|||+||+++||+++  ...||....   ....++........+.. .     .-...+..|+..+
T Consensus       706 mawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt---~e~vven~~~~~~~~~~-~-----~~l~~P~~cp~~l  776 (807)
T KOG1094|consen  706 MAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT---DEQVVENAGEFFRDQGR-Q-----VVLSRPPACPQGL  776 (807)
T ss_pred             hhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh---HHHHHHhhhhhcCCCCc-c-----eeccCCCcCcHHH
Confidence            78999999999999999999999999876  456754322   22222222222211111 1     1123344566788


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      .+++++||..+..+||++++++..|+...
T Consensus       777 yelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  777 YELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             HHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence            89999999999999999999999987643


No 127
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.36  E-value=2.8e-13  Score=92.37  Aligned_cols=89  Identities=22%  Similarity=0.326  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||++|++++|+++ |..||....   ......++    ........         +......+.
T Consensus       178 ~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~---~~~~~~~i----~~~~~~~~---------~~~~~~~~~  241 (269)
T cd05065         178 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS---NQDVINAI----EQDYRLPP---------PMDCPTALH  241 (269)
T ss_pred             cCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC---HHHHHHHH----HcCCcCCC---------cccCCHHHH
Confidence            57999888889999999999999999886 888864321   11111111    11111000         011123466


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|++||++.+++..|+.
T Consensus       242 ~li~~~l~~~p~~Rp~~~~i~~~l~~  267 (269)
T cd05065         242 QLMLDCWQKDRNARPKFGQIVSTLDK  267 (269)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHh
Confidence            78889999999999999999998865


No 128
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.35  E-value=1.5e-12  Score=93.49  Aligned_cols=34  Identities=24%  Similarity=0.459  Sum_probs=31.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNR   34 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~   34 (149)
                      +|||++.+..|+.++||||+||+++++++|+.|+
T Consensus       250 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~  283 (391)
T PHA03212        250 NAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL  283 (391)
T ss_pred             CChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence            5899998889999999999999999999998774


No 129
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.35  E-value=2.8e-13  Score=92.41  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=61.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++....++.++||||+|++++++++ |+.||.....   ...    ......+.....         .......+.
T Consensus       182 ~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~----~~~~~~~~~~~~---------~~~~~~~~~  245 (273)
T cd05074         182 LALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEI----YNYLIKGNRLKQ---------PPDCLEDVY  245 (273)
T ss_pred             cCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHH----HHHHHcCCcCCC---------CCCCCHHHH
Confidence            46788777778899999999999999998 7787643211   111    111111111100         011234677


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|++||++.++++.|+.+
T Consensus       246 ~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         246 ELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            899999999999999999999998754


No 130
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.35  E-value=4.1e-13  Score=91.12  Aligned_cols=88  Identities=18%  Similarity=0.257  Sum_probs=59.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|||++|+++|++++|+.||....      .................         +......+.+
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~------~~~~~~~~~~~~~~~~~---------~~~~~~~~~~  238 (263)
T cd06625         174 MSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE------AMAAIFKIATQPTNPQL---------PSHVSPDARN  238 (263)
T ss_pred             cCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc------hHHHHHHHhccCCCCCC---------CccCCHHHHH
Confidence            58999988889999999999999999999999964221      11111111111111111         1112234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+||..+|.+||++.+++++.
T Consensus       239 li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         239 FLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             HHHHHhhcCcccCCCHHHHhhCC
Confidence            88899999999999999998754


No 131
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.35  E-value=2.9e-13  Score=101.98  Aligned_cols=88  Identities=18%  Similarity=0.203  Sum_probs=66.0

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      |-|.+....|++++|||+|||++||+++ |..||+...                ....++.+....+...+..+..+...
T Consensus       868 ale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~----------------~~eI~dlle~geRLsqPpiCtiDVy~  931 (1177)
T KOG1025|consen  868 ALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP----------------AEEIPDLLEKGERLSQPPICTIDVYM  931 (1177)
T ss_pred             HHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC----------------HHHhhHHHhccccCCCCCCccHHHHH
Confidence            4466677889999999999999999887 888975432                12223333334444555667778888


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      ++.+||..|+..||+|+++...+..
T Consensus       932 ~mvkCwmid~~~rp~fkel~~~fs~  956 (1177)
T KOG1025|consen  932 VMVKCWMIDADSRPTFKELAEEFSR  956 (1177)
T ss_pred             HHHHHhccCcccCccHHHHHHHHHH
Confidence            9999999999999999999876554


No 132
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.35  E-value=2.2e-13  Score=94.58  Aligned_cols=91  Identities=21%  Similarity=0.244  Sum_probs=62.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||++.+..++.++||||||++++|+++ |..||.....   ..    .......+.....         .......+.
T Consensus       178 ~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~---~~----~~~~~~~~~~~~~---------~~~~~~~~~  241 (303)
T cd05110         178 MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT---RE----IPDLLEKGERLPQ---------PPICTIDVY  241 (303)
T ss_pred             CCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HH----HHHHHHCCCCCCC---------CCCCCHHHH
Confidence            57898888889999999999999999987 8888643211   11    1111222211100         001123566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++..||..+|++||++.++++.|..+.
T Consensus       242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         242 MVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            7888999999999999999999988764


No 133
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.35  E-value=6.5e-13  Score=90.11  Aligned_cols=100  Identities=15%  Similarity=0.228  Sum_probs=62.5

Q ss_pred             CcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHH--------HHHhcC-CCcchhchhhhcccc
Q 043384            2 APEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAW--------KLWNKG-MPSQLIDACIQDLCN   71 (149)
Q Consensus         2 apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~   71 (149)
                      |||.+.+ .+|...+|||++||++.||++|.+.|......++...+....        .....+ ....+.-+......+
T Consensus       169 aPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ep  248 (396)
T KOG0593|consen  169 APELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEP  248 (396)
T ss_pred             ChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccc
Confidence            7898877 889999999999999999999999875443333222222111        111111 111111111111111


Q ss_pred             HHH-----HHHHHHHHHHhcCCCCCCCCChHHHHH
Q 043384           72 FAE-----VIRCIHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        72 ~~~-----~~~~~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      .+.     ...+++++..||++||++|+++++++.
T Consensus       249 Le~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  249 LERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             hhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            111     125789999999999999999999986


No 134
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.35  E-value=1.6e-12  Score=92.13  Aligned_cols=90  Identities=19%  Similarity=0.209  Sum_probs=56.5

Q ss_pred             CCcccccC-----CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYASD-----GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~~-----~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      +|||++..     ...+.++|||+|||++||+++|+.||.......   ... .............         .....
T Consensus       235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~---~~~-~~~~~~~~~~~~~---------~~~~~  301 (353)
T PLN00034        235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD---WAS-LMCAICMSQPPEA---------PATAS  301 (353)
T ss_pred             cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc---HHH-HHHHHhccCCCCC---------CCccC
Confidence            57898743     223468999999999999999999975221111   111 1111111111110         01122


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ..+.+|+.+||+.||++||++.+++++-
T Consensus       302 ~~l~~li~~~l~~~P~~Rpt~~ell~hp  329 (353)
T PLN00034        302 REFRHFISCCLQREPAKRWSAMQLLQHP  329 (353)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            4567788899999999999999999854


No 135
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.35  E-value=3e-13  Score=93.23  Aligned_cols=97  Identities=14%  Similarity=0.158  Sum_probs=59.2

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhc-------c---
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQD-------L---   69 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~---   69 (149)
                      +|||++.+ ..++.++||||+||+++++++|+.||.......   .........  +.+.....+....       .   
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  244 (288)
T cd07871         170 RPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE---ELHLIFRLL--GTPTEETWPGITSNEEFRSYLFPQ  244 (288)
T ss_pred             cChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHh--CCCChHHhhccccchhhhccccCc
Confidence            58998865 568999999999999999999999975332211   111111111  1000000000000       0   


Q ss_pred             ---ccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           70 ---CNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        70 ---~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                         ...     .....+.+++.+||..||.+|+|+.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         245 YRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             cCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence               000     012356789999999999999999999864


No 136
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.35  E-value=1e-12  Score=91.70  Aligned_cols=36  Identities=17%  Similarity=0.349  Sum_probs=31.7

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      ||||++.+ ..++.++||||+||+++++++|+.||..
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            68999876 4588999999999999999999999753


No 137
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.35  E-value=1.2e-12  Score=87.82  Aligned_cols=90  Identities=20%  Similarity=0.315  Sum_probs=63.6

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ||||.+.   ..+|...+||||||+.++|+.+|+.||...+-+  .   +-+.+.. +..++ .++....      +...
T Consensus       258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--F---e~ltkvl-n~ePP-~L~~~~g------FSp~  324 (391)
T KOG0983|consen  258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--F---EVLTKVL-NEEPP-LLPGHMG------FSPD  324 (391)
T ss_pred             cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--H---HHHHHHH-hcCCC-CCCcccC------cCHH
Confidence            7899884   357999999999999999999999998643321  1   2222323 23332 2222221      3456


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.++..||.+|+.+||...+++++-
T Consensus       325 F~~fv~~CL~kd~r~RP~Y~~Ll~h~  350 (391)
T KOG0983|consen  325 FQSFVKDCLTKDHRKRPKYNKLLEHP  350 (391)
T ss_pred             HHHHHHHHhhcCcccCcchHHHhcCc
Confidence            67788899999999999999999754


No 138
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.35  E-value=2.6e-13  Score=91.81  Aligned_cols=86  Identities=17%  Similarity=0.164  Sum_probs=59.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|+||++++++++|..||.....      ... ......+......         ......+.+
T Consensus       167 ~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~-~~~~~~~~~~~~~---------~~~~~~~~~  230 (255)
T cd08219         167 VPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNL-ILKVCQGSYKPLP---------SHYSYELRS  230 (255)
T ss_pred             cCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHH-HHHHhcCCCCCCC---------cccCHHHHH
Confidence            589998888899999999999999999999999753211      111 1111122211110         011234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.||++||++.+++..
T Consensus       231 li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         231 LIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHhCCcccCCCHHHHhhc
Confidence            8889999999999999999863


No 139
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.34  E-value=1.2e-12  Score=97.58  Aligned_cols=88  Identities=23%  Similarity=0.327  Sum_probs=60.0

Q ss_pred             CCcccccCC--ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDG--QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~--~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++..+  .|..++|||||||++.||.+|++||-....   .....     .+.|... .-     ...+.+-...+
T Consensus       743 MAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgs---pqAAM-----FkVGmyK-vH-----P~iPeelsaea  808 (1226)
T KOG4279|consen  743 MAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGS---PQAAM-----FKVGMYK-VH-----PPIPEELSAEA  808 (1226)
T ss_pred             hChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCC---hhHhh-----hhhccee-cC-----CCCcHHHHHHH
Confidence            899999665  489999999999999999999999743221   11111     1112110 00     01112223456


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+++++|.+.+|.+||++.++++-
T Consensus       809 k~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  809 KNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             HHHHHHHcCCCcccCccHHHhccC
Confidence            789999999999999999999973


No 140
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.34  E-value=5.1e-13  Score=90.36  Aligned_cols=89  Identities=27%  Similarity=0.299  Sum_probs=61.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+|++|++++++++ |+.||.....      .. .......+......         ......+.
T Consensus       164 ~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~------~~-~~~~~~~~~~~~~~---------~~~~~~~~  227 (254)
T cd05083         164 TAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL------KE-VKECVEKGYRMEPP---------EGCPADVY  227 (254)
T ss_pred             cCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH------HH-HHHHHhCCCCCCCC---------CcCCHHHH
Confidence            47898888889999999999999999997 8888643221      11 11111222111110         11124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||+.+|++||++.++++.|+.
T Consensus       228 ~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         228 VLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            78899999999999999999998864


No 141
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.34  E-value=3.3e-13  Score=95.31  Aligned_cols=92  Identities=30%  Similarity=0.416  Sum_probs=63.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||+||++++++++ |..||.......      ........+.......     .    ....+.
T Consensus       248 ~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~-----~----~~~~~~  312 (343)
T cd05103         248 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRAPD-----Y----TTPEMY  312 (343)
T ss_pred             ECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH------HHHHHHhccCCCCCCC-----C----CCHHHH
Confidence            57998888889999999999999999996 888875332111      1111111221111100     0    123467


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|.+||++.+|++.|+.+.
T Consensus       313 ~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         313 QTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            7888999999999999999999987654


No 142
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.34  E-value=1.8e-12  Score=89.14  Aligned_cols=97  Identities=19%  Similarity=0.208  Sum_probs=61.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCC--------CCcccchHHHHHHHHhcCCCcchhchhhhccccH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYH--------SDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNF   72 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (149)
                      +|||++.+..++.++||||+|++++++++++.+.....        +................+.....         ..
T Consensus       179 ~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  249 (284)
T cd05079         179 YAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPR---------PP  249 (284)
T ss_pred             cCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCC---------CC
Confidence            57898888889999999999999999999766531100        00000001111111111111100         01


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           73 AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        73 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      .....+.+++.+||+.+|++||++.++++.|+.+
T Consensus       250 ~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         250 NCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            1234677899999999999999999999998764


No 143
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.34  E-value=1.3e-12  Score=91.58  Aligned_cols=36  Identities=25%  Similarity=0.434  Sum_probs=31.5

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      ||||++.+  ..|+.++|||||||+++++++|+.||..
T Consensus       175 ~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         175 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             cChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            58999865  4588999999999999999999999753


No 144
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.34  E-value=4.4e-12  Score=87.36  Aligned_cols=98  Identities=21%  Similarity=0.191  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|||++|++++++++|+.||...... ........ ........+..... ....  ..-...+.+
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~-~~~~--~~~~~~~~~  244 (287)
T cd06621         170 MAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEP-PLGPIELL-SYIVNMPNPELKDE-PGNG--IKWSEEFKD  244 (287)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCC-CCChHHHH-HHHhcCCchhhccC-CCCC--CchHHHHHH
Confidence            4789888888999999999999999999999997643220 11111111 11111111111110 0000  011245678


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+||..+|.+||++.++++.-
T Consensus       245 li~~~l~~~p~~Rpt~~eil~~~  267 (287)
T cd06621         245 FIKQCLEKDPTRRPTPWDMLEHP  267 (287)
T ss_pred             HHHHHcCCCcccCCCHHHHHhCc
Confidence            99999999999999999999854


No 145
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.34  E-value=2.4e-12  Score=96.82  Aligned_cols=92  Identities=17%  Similarity=0.108  Sum_probs=64.6

Q ss_pred             Ccccc---cCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            2 APEYA---SDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         2 apE~~---~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      +||++   .+...+.|+|||++||+||-+++...||+....                   ..++.....-.....-...+
T Consensus       223 sPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------------------laIlng~Y~~P~~p~ys~~l  283 (738)
T KOG1989|consen  223 SPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------------------LAILNGNYSFPPFPNYSDRL  283 (738)
T ss_pred             ChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------------------eeEEeccccCCCCccHHHHH
Confidence            68876   456688999999999999999999999863211                   11111111100011223456


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccCCcCCCC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSETVLSQP  112 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~~  112 (149)
                      .+|+..||+.||++||.+-+|++.+..+.....+
T Consensus       284 ~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~  317 (738)
T KOG1989|consen  284 KDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP  317 (738)
T ss_pred             HHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence            7788899999999999999999988877655443


No 146
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.34  E-value=6.7e-13  Score=89.91  Aligned_cols=86  Identities=16%  Similarity=0.223  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|+.||....   .    .........+......         ......+.+
T Consensus       177 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~----~~~~~~~~~~~~~~~~---------~~~~~~~~~  240 (265)
T cd08217         177 MSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---Q----LQLASKIKEGKFRRIP---------YRYSSELNE  240 (265)
T ss_pred             cChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---H----HHHHHHHhcCCCCCCc---------cccCHHHHH
Confidence            57999888888999999999999999999999975332   1    1112222222221111         112245678


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.+|+++
T Consensus       241 l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         241 VIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHccCCcccCCCHHHHhhC
Confidence            8999999999999999999875


No 147
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.34  E-value=4.7e-12  Score=88.18  Aligned_cols=101  Identities=19%  Similarity=0.219  Sum_probs=59.6

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHH-----------hcCCCcc-------
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLW-----------NKGMPSQ-------   60 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-------   60 (149)
                      +|||++..  ..++.++|+||||++++++++|..||......  ...........           .......       
T Consensus       175 ~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (314)
T cd08216         175 LSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEH  252 (314)
T ss_pred             cCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchhhhcCCcCcccccccc
Confidence            57888765  35889999999999999999999997533211  11111100000           0000000       


Q ss_pred             -hhchhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           61 -LIDACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        61 -~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                       .................+.+++.+||+.||++||++.+++++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p  296 (314)
T cd08216         253 PNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS  296 (314)
T ss_pred             cchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence             0000000111112234677899999999999999999999753


No 148
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.34  E-value=8.4e-13  Score=94.18  Aligned_cols=100  Identities=14%  Similarity=0.172  Sum_probs=59.7

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHH----------------HHHHhcC-CCcchh
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHA----------------WKLWNKG-MPSQLI   62 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~----------------~~~~~~~-~~~~~~   62 (149)
                      +|||++.+. .++.++||||+||+++|+++|+.||...........+...                ...+... ..+...
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (372)
T cd07853         171 RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSL  250 (372)
T ss_pred             CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCch
Confidence            578988764 4789999999999999999999998644322111111000                0000000 000000


Q ss_pred             chhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           63 DACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ....  .........+.+++.+||+.||.+||++.+++++
T Consensus       251 ~~~~--~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         251 PVLY--TLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHhc--ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            0000  0000112456789999999999999999999975


No 149
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.33  E-value=2.3e-12  Score=91.70  Aligned_cols=98  Identities=12%  Similarity=0.092  Sum_probs=61.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCC-cch------------------
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMP-SQL------------------   61 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------   61 (149)
                      +|||++.+..++.++||||+||+++++++|+.||.......   ....+....  +.+ +..                  
T Consensus       192 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  266 (364)
T cd07875         192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID---QWNKVIEQL--GTPCPEFMKKLQPTVRTYVENRPKY  266 (364)
T ss_pred             CCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHhc--CCCCHHHHHhhhHHHHHHHhhCCCc
Confidence            58999999899999999999999999999999975432111   111111000  000 000                  


Q ss_pred             hchhhhc-----------cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           62 IDACIQD-----------LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        62 ~~~~~~~-----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .......           .........+.+++.+||+.||.+|||+.+++++-
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp  319 (364)
T cd07875         267 AGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  319 (364)
T ss_pred             CCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence            0000000           00001123567899999999999999999999853


No 150
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.33  E-value=5.4e-13  Score=90.91  Aligned_cols=90  Identities=23%  Similarity=0.357  Sum_probs=61.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+|+||++++++++ |..||.....   .....    ....+.....         .......+.
T Consensus       176 ~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---~~~~~----~~~~~~~~~~---------~~~~~~~~~  239 (267)
T cd05066         176 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVIK----AIEEGYRLPA---------PMDCPAALH  239 (267)
T ss_pred             cCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---HHHHH----HHhCCCcCCC---------CCCCCHHHH
Confidence            57999888889999999999999999886 8888643221   11111    1111111000         001124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +++.+||+.+|.+||++.++++.|+..
T Consensus       240 ~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         240 QLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            788999999999999999999998753


No 151
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.33  E-value=7.9e-13  Score=89.32  Aligned_cols=86  Identities=22%  Similarity=0.320  Sum_probs=59.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|||+||++++++++|..||.....   .....   .. ..+.......         .....+.+
T Consensus       168 ~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~---~~-~~~~~~~~~~---------~~~~~l~~  231 (256)
T cd08220         168 ISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVL---KI-MSGTFAPISD---------RYSPDLRQ  231 (256)
T ss_pred             cCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHH---HH-HhcCCCCCCC---------CcCHHHHH
Confidence            579999888889999999999999999999998753221   11111   11 1111111111         12234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.+++++
T Consensus       232 li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         232 LILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHccCChhhCCCHHHHhhC
Confidence            8889999999999999999864


No 152
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.33  E-value=3.6e-12  Score=90.34  Aligned_cols=100  Identities=15%  Similarity=0.094  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHh------------------cCCC--cc
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWN------------------KGMP--SQ   60 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~------------------~~~~--~~   60 (149)
                      +|||++.+..++.++||||+||+++++++|+.||......   ...........                  ...+  ..
T Consensus       185 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (355)
T cd07874         185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG  261 (355)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc
Confidence            6899998888999999999999999999999997532211   11111100000                  0000  00


Q ss_pred             hh-chhh-hcc------ccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           61 LI-DACI-QDL------CNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        61 ~~-~~~~-~~~------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .. .... ...      ........+.+++.+||+.||.+|||+.+++++-
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp  312 (355)
T cd07874         262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP  312 (355)
T ss_pred             ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence            00 0000 000      0001123567899999999999999999999863


No 153
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.33  E-value=9.2e-13  Score=91.81  Aligned_cols=35  Identities=17%  Similarity=0.366  Sum_probs=31.0

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      +|||++.+ ..++.++||||+||+++|+++|+.||.
T Consensus       182 ~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            68998876 458899999999999999999999975


No 154
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.33  E-value=2.5e-13  Score=94.15  Aligned_cols=98  Identities=19%  Similarity=0.240  Sum_probs=65.4

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchh----------------
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDAC----------------   65 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   65 (149)
                      |||++.+..++..+||||+||+++|+.+|...|+...........+.    +....+.....+.                
T Consensus       277 APEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMer----IlGp~P~~mi~r~~~~Kyf~~~rldw~e~  352 (415)
T KOG0671|consen  277 APEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMER----ILGPIPSRMIKKTRKEKYFRRGRLDWPEV  352 (415)
T ss_pred             CchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHH----hhCCCcHHHhhhhhhHhhhhcccccCccc
Confidence            89999999999999999999999999999998765442222211111    1111111111111                


Q ss_pred             ---------hhc--------cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           66 ---------IQD--------LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        66 ---------~~~--------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                               .+.        .....+...+++|+.++|..||.+|.|+.|++.+-
T Consensus       353 ~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~Hp  407 (415)
T KOG0671|consen  353 SSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHP  407 (415)
T ss_pred             cccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCH
Confidence                     000        11122345689999999999999999999998753


No 155
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.32  E-value=9.8e-13  Score=90.35  Aligned_cols=98  Identities=13%  Similarity=0.173  Sum_probs=60.0

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCC------------------cch
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMP------------------SQL   61 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~   61 (149)
                      +|||++.+. .++.++|+|++|++++++++|+.||......   .........+ ....                  +..
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T cd07833         168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI---DQLYLIQKCL-GPLPPSHQELFSSNPRFAGVAFPEP  243 (288)
T ss_pred             cCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHh-CCCCHHHhhhcccCccccccccCCC
Confidence            589998877 7889999999999999999999887532211   0110000000 0000                  000


Q ss_pred             hch-hhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           62 IDA-CIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        62 ~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ... .....++......+.+++.+||..+|++||++.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         244 SQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             CCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            000 00001111123567889999999999999999999864


No 156
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.32  E-value=1.7e-12  Score=95.90  Aligned_cols=86  Identities=27%  Similarity=0.276  Sum_probs=60.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++|||||||++|++++|+.||....      ........ ..+.....         +......+.+
T Consensus       212 ~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~~-~~~~~~~~---------~~~~~~~l~~  275 (496)
T PTZ00283        212 VAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHKT-LAGRYDPL---------PPSISPEMQE  275 (496)
T ss_pred             eCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHH-hcCCCCCC---------CCCCCHHHHH
Confidence            68999998889999999999999999999999975321      11111111 11111110         0111245667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.||.+||++.+++.+
T Consensus       276 li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        276 IVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHcccChhhCcCHHHHHhC
Confidence            8889999999999999999874


No 157
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.32  E-value=1.1e-12  Score=95.92  Aligned_cols=87  Identities=17%  Similarity=0.072  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      .|||++....|+.+||+||+|+++|+|++|+.||.....+      ..+...+..+....            .-...+.+
T Consensus       480 ~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~------~ei~~~i~~~~~s~------------~vS~~AKd  541 (612)
T KOG0603|consen  480 VAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG------IEIHTRIQMPKFSE------------CVSDEAKD  541 (612)
T ss_pred             cChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch------HHHHHhhcCCcccc------------ccCHHHHH
Confidence            3899999999999999999999999999999998643322      11222222111110            01124556


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      |+.+||+.||.+|++++++..+-..
T Consensus       542 Ll~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  542 LLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHhccCChhhCcChhhhccCcch
Confidence            8889999999999999999976544


No 158
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.32  E-value=4.5e-12  Score=86.11  Aligned_cols=92  Identities=23%  Similarity=0.331  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|..||...... ............ ....+.....        .....+.+
T Consensus       166 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~  235 (265)
T cd06605         166 MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELLQYIV-NEPPPRLPSG--------KFSPDFQD  235 (265)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHHHHHh-cCCCCCCChh--------hcCHHHHH
Confidence            5799998888999999999999999999999997533211 111222221111 1111111100        02234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++..||..+|++||++.+++..
T Consensus       236 li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         236 FVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHcCCCchhCcCHHHHhhC
Confidence            8889999999999999999864


No 159
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.32  E-value=4.9e-12  Score=87.58  Aligned_cols=88  Identities=18%  Similarity=0.256  Sum_probs=59.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||.+.+..++.++|||+|||+++++++|+.||......      ...........+. ...       +......+.+
T Consensus       183 ~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~-~~~-------~~~~~~~l~~  248 (296)
T cd06654         183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTPE-LQN-------PEKLSAIFRD  248 (296)
T ss_pred             cCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH------HhHHHHhcCCCCC-CCC-------ccccCHHHHH
Confidence            5799988888899999999999999999999997532211      1111111111110 000       0111234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.++++.
T Consensus       249 li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         249 FLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHHHCcCCcccCcCHHHHhhC
Confidence            8889999999999999999974


No 160
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.32  E-value=1.2e-12  Score=90.72  Aligned_cols=88  Identities=18%  Similarity=0.234  Sum_probs=59.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|||+|||+++++++|+.||......      .......... ......       +......+.+
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~------~~~~~~~~~~-~~~~~~-------~~~~~~~~~~  247 (296)
T cd06655         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL------RALYLIATNG-TPELQN-------PEKLSPIFRD  247 (296)
T ss_pred             cCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcC-CcccCC-------cccCCHHHHH
Confidence            5799988888999999999999999999999997533211      1111111111 110000       0011234566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|.+||++.+++.+
T Consensus       248 li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         248 FLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             HHHHHhhcChhhCCCHHHHhhC
Confidence            8889999999999999999974


No 161
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.32  E-value=1.3e-12  Score=89.50  Aligned_cols=85  Identities=22%  Similarity=0.347  Sum_probs=56.8

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHH-hcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIV-SGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      +|||++.+ ..++.++|||+||+++||++ .|..||.......   . .....  .....+.            .....+
T Consensus       187 ~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~-~~~~~--~~~~~~~------------~~~~~~  248 (274)
T cd05076         187 IAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---K-ERFYE--KKHRLPE------------PSCKEL  248 (274)
T ss_pred             cCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH---H-HHHHH--hccCCCC------------CCChHH
Confidence            57998865 56889999999999999985 6888864322111   0 01000  0001110            011346


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .+++.+||+.+|++||++.+|++.|
T Consensus       249 ~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         249 ATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHHHHHcccChhhCcCHHHHHHhh
Confidence            6788899999999999999999877


No 162
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.32  E-value=8.3e-13  Score=91.60  Aligned_cols=102  Identities=11%  Similarity=0.072  Sum_probs=58.9

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh---------------ch
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI---------------DA   64 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~   64 (149)
                      +|||++.+. .++.++|+|+||++++++++|+.+|...........+..+.........+...               ..
T Consensus       190 ~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (310)
T cd07865         190 RPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRK  269 (310)
T ss_pred             cCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchh
Confidence            579987664 47889999999999999999998875433221111111111000000000000               00


Q ss_pred             hhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           65 CIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .............+.+++.+||..||.+||++.+++++
T Consensus       270 ~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             hHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            00000000112356789999999999999999999864


No 163
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.32  E-value=1.2e-12  Score=88.56  Aligned_cols=86  Identities=19%  Similarity=0.298  Sum_probs=59.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|+.||....      ........ ..+.....         +......+.+
T Consensus       168 ~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~------~~~~~~~~-~~~~~~~~---------~~~~~~~~~~  231 (256)
T cd08218         168 LSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN------MKNLVLKI-IRGSYPPV---------SSHYSYDLRN  231 (256)
T ss_pred             cCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC------HHHHHHHH-hcCCCCCC---------cccCCHHHHH
Confidence            47899888888999999999999999999999864221      11111111 11211111         1112345677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.+|+++
T Consensus       232 li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         232 LVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHhhCChhhCcCHHHHhhC
Confidence            8889999999999999999974


No 164
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.32  E-value=1e-12  Score=89.64  Aligned_cols=91  Identities=24%  Similarity=0.282  Sum_probs=62.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++....++.++||||+|++++++++ |..||.....   .....+    ...+......         ......+.
T Consensus       175 ~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~----~~~~~~~~~~---------~~~~~~~~  238 (270)
T cd05056         175 MAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN---NDVIGR----IENGERLPMP---------PNCPPTLY  238 (270)
T ss_pred             cChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHH----HHcCCcCCCC---------CCCCHHHH
Confidence            57998888889999999999999999886 9888753321   111111    1122111110         11123566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||..+|++||++.+++..|..+.
T Consensus       239 ~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         239 SLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            7888999999999999999999987654


No 165
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.31  E-value=9.8e-13  Score=88.97  Aligned_cols=86  Identities=20%  Similarity=0.239  Sum_probs=60.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||+..+..++.++|+|++|++++++++|+.||.....      ..... ....+..+..         +......+.+
T Consensus       169 ~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~------~~~~~-~~~~~~~~~~---------~~~~~~~~~~  232 (257)
T cd08223         169 MSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM------NSLVY-RIIEGKLPPM---------PKDYSPELGE  232 (257)
T ss_pred             cChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHH-HHHhcCCCCC---------ccccCHHHHH
Confidence            589999888899999999999999999999998753211      11111 1122222111         1112245677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.+++++
T Consensus       233 li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         233 LIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             HHHHHhccCcccCCCHHHHhcC
Confidence            8999999999999999999864


No 166
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.31  E-value=8.8e-13  Score=89.45  Aligned_cols=89  Identities=30%  Similarity=0.444  Sum_probs=61.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+.+..++.++|+|++|++++++++ |+.||....   .......    ...+.....         +......+.
T Consensus       171 ~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~---~~~~~~~----~~~~~~~~~---------~~~~~~~~~  234 (261)
T cd05034         171 TAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT---NREVLEQ----VERGYRMPR---------PPNCPEELY  234 (261)
T ss_pred             cCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHH----HHcCCCCCC---------CCCCCHHHH
Confidence            47888888888999999999999999998 888874221   1111111    111111000         001123567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      +++.+||..+|++||++.++++.|+.
T Consensus       235 ~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         235 DLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHHhc
Confidence            78889999999999999999998864


No 167
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.31  E-value=9.2e-13  Score=89.62  Aligned_cols=86  Identities=19%  Similarity=0.300  Sum_probs=58.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|+.||.....      ...+.. ......+..         +......+.+
T Consensus       179 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~------~~~~~~-~~~~~~~~~---------~~~~~~~~~~  242 (267)
T cd06628         179 MAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ------LQAIFK-IGENASPEI---------PSNISSEAID  242 (267)
T ss_pred             cChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH------HHHHHH-HhccCCCcC---------CcccCHHHHH
Confidence            478888888889999999999999999999999753211      011111 111111111         0111244667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|.+||++.++++.
T Consensus       243 li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         243 FLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHHHHccCCchhCcCHHHHhhC
Confidence            8889999999999999999864


No 168
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.31  E-value=2.7e-12  Score=87.25  Aligned_cols=87  Identities=22%  Similarity=0.349  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|||++|++++++++|..||.....     ..............+...         ......+.+
T Consensus       175 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  240 (265)
T cd06631         175 MAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR-----LAAMFYIGAHRGLMPRLP---------DSFSAAAID  240 (265)
T ss_pred             cChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh-----HHHHHHhhhccCCCCCCC---------CCCCHHHHH
Confidence            478998888899999999999999999999999753211     111111111111111111         111234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      ++.+||+.+|.+||++.+++.
T Consensus       241 ~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         241 FVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHhcCCcccCCCHHHHhc
Confidence            888999999999999999985


No 169
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.31  E-value=7e-13  Score=90.91  Aligned_cols=92  Identities=23%  Similarity=0.239  Sum_probs=63.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+....++.++|+|+||++++|+++ |+.||......   ..    ......+......         ..+...+.
T Consensus       178 ~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~----~~~~~~~~~~~~~---------~~~~~~~~  241 (279)
T cd05057         178 MALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV---EI----PDLLEKGERLPQP---------PICTIDVY  241 (279)
T ss_pred             cCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH---HH----HHHHhCCCCCCCC---------CCCCHHHH
Confidence            57888888889999999999999999998 99987543211   11    1111122111110         01123456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      +++.+||..+|.+||++.+++..|.....
T Consensus       242 ~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         242 MVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            68889999999999999999999887643


No 170
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.31  E-value=9.6e-13  Score=89.63  Aligned_cols=86  Identities=21%  Similarity=0.313  Sum_probs=55.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|||++|++++++++|+.||.....      .............+..         +......+..
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~~---------~~~~~~~~~~  240 (266)
T cd06651         176 MSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA------MAAIFKIATQPTNPQL---------PSHISEHARD  240 (266)
T ss_pred             cCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch------HHHHHHHhcCCCCCCC---------chhcCHHHHH
Confidence            579998888899999999999999999999999753211      1111111111111110         1111122233


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++ +||..+|++||++.+|+++
T Consensus       241 li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcC
Confidence            43 7888999999999999864


No 171
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.31  E-value=1.9e-12  Score=90.14  Aligned_cols=101  Identities=19%  Similarity=0.225  Sum_probs=60.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcc--------------------
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQ--------------------   60 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------   60 (149)
                      ++||++.+..++.++|+|+||++++++++|+.||.......   ................                    
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (308)
T cd06615         165 MSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFE  241 (308)
T ss_pred             cChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCcccccCCCCCccchhhHHH
Confidence            47999888889999999999999999999999975322111   0000000000000000                    


Q ss_pred             hhchhhh---cccc-HHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           61 LIDACIQ---DLCN-FAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        61 ~~~~~~~---~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .......   ...+ ......+.+++.+||..+|++||++.++++...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  289 (308)
T cd06615         242 LLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF  289 (308)
T ss_pred             HHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            0000000   0000 001235778999999999999999999998654


No 172
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.31  E-value=1.9e-12  Score=90.02  Aligned_cols=88  Identities=23%  Similarity=0.287  Sum_probs=58.5

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||++.   ...++.++|||+||+++|++++|+.||.....      ...... ......+...        .......
T Consensus       178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~------~~~~~~-~~~~~~~~~~--------~~~~~~~  242 (307)
T cd06607         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYH-IAQNDSPTLS--------SNDWSDY  242 (307)
T ss_pred             cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccH------HHHHHH-HhcCCCCCCC--------chhhCHH
Confidence            5789874   35688999999999999999999998642211      111111 1111111111        1112345


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +.+++.+||..+|++||++.+|+.+.
T Consensus       243 ~~~li~~~l~~~p~~Rp~~~~il~~~  268 (307)
T cd06607         243 FRNFVDSCLQKIPQDRPSSEELLKHR  268 (307)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhcCh
Confidence            67888999999999999999998754


No 173
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.30  E-value=1.2e-12  Score=101.50  Aligned_cols=84  Identities=20%  Similarity=0.273  Sum_probs=56.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++|||||||+++||+++..++...     .....    .+.....+    +..     .........
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~-----~~~~~----~~~~~~~~----~~~-----~~~~~~~~~  243 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEK-----SRTMS----SLRHRVLP----PQI-----LLNWPKEAS  243 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhH-----HHHHH----HHHHhhcC----hhh-----hhcCHHHHH
Confidence            6899999999999999999999999999987764311     00110    01111110    000     011223456


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|.+||++.+++++
T Consensus       244 ~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        244 FCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHHhCCCChhhCcChHHHhhc
Confidence            7789999999999999999874


No 174
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.30  E-value=2.5e-12  Score=90.39  Aligned_cols=92  Identities=13%  Similarity=0.222  Sum_probs=60.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCc--ccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDN--KLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++.+..++.++|+||+||+++++++|+.||+......  ......+.......... ...         ......+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p---------~~~~~~~  232 (329)
T cd05588         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-RIP---------RSLSVKA  232 (329)
T ss_pred             cCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-CCC---------CCCCHHH
Confidence            68999998899999999999999999999999986432211  11122222222222211 110         0112345


Q ss_pred             HHHHHHhcCCCCCCCCC------hHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPC------MPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps------~~~vl~~  102 (149)
                      .+++.+||+.||.+|++      +.+++++
T Consensus       233 ~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         233 SSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             HHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            67888999999999997      5677754


No 175
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.30  E-value=1.1e-12  Score=92.25  Aligned_cols=93  Identities=14%  Similarity=0.126  Sum_probs=60.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcC-CCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKG-MPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..++.++||||+||++++|++|..||......   .....+.. +... ..+....+.      ......+.
T Consensus       165 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~---~~~~~i~~-~~~~~~~~~~~~~~------~~~s~~~~  234 (333)
T cd05600         165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN---ETWENLKY-WKETLQRPVYDDPR------FNLSDEAW  234 (333)
T ss_pred             cChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH---HHHHHHHh-ccccccCCCCCccc------cccCHHHH
Confidence            6899999889999999999999999999999997533211   11111110 0000 000000000      11124566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +++.+||..+|.+||++.+++++.
T Consensus       235 ~li~~~l~~~~~rr~s~~~ll~h~  258 (333)
T cd05600         235 DLITKLINDPSRRFGSLEDIKNHP  258 (333)
T ss_pred             HHHHHHhhChhhhcCCHHHHHhCc
Confidence            788899999999999999999753


No 176
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.30  E-value=8.8e-12  Score=84.49  Aligned_cols=90  Identities=17%  Similarity=0.215  Sum_probs=59.0

Q ss_pred             CCcccccCC---ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDG---QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~---~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||.+...   .++.++|+|++|++++++++|..||......      ................      .........
T Consensus       168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~~~~~  235 (262)
T cd06613         168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM------RALFLISKSNFPPPKL------KDKEKWSPV  235 (262)
T ss_pred             cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhccCCCccc------cchhhhhHH
Confidence            578988766   7889999999999999999999997532211      1111111111010000      001122345


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +.+++.+||..+|.+||++.+|+.+
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         236 FHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcC
Confidence            7789999999999999999999853


No 177
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.30  E-value=2.9e-12  Score=87.39  Aligned_cols=92  Identities=22%  Similarity=0.328  Sum_probs=56.4

Q ss_pred             CCcccccCC-------ccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccH
Q 043384            1 MAPEYASDG-------QFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNF   72 (149)
Q Consensus         1 ~apE~~~~~-------~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (149)
                      +|||++.+.       .++.++|+||||++++++++ |+.||.......   ..   ..... +.......+....    
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~~---~~~~~-~~~~~~~~~~~~~----  237 (269)
T cd05087         169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ---VL---TYTVR-EQQLKLPKPRLKL----  237 (269)
T ss_pred             cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH---HH---HHHhh-cccCCCCCCccCC----
Confidence            578887532       35789999999999999986 998975432211   11   11111 1111111111111    


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           73 AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        73 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .....+.+++..|| .+|++||++.+|+..|.
T Consensus       238 ~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         238 PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            11234566888999 68999999999998874


No 178
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30  E-value=1.6e-12  Score=87.53  Aligned_cols=89  Identities=26%  Similarity=0.339  Sum_probs=62.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      |+||.+.+..|+.|+||||+||+++||+..+.||..   +   ++. ...+.+.++..+.+.+..        -..++..
T Consensus       195 MSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g---~---n~~-~L~~KI~qgd~~~~p~~~--------YS~~l~~  259 (375)
T KOG0591|consen  195 MSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG---D---NLL-SLCKKIEQGDYPPLPDEH--------YSTDLRE  259 (375)
T ss_pred             cCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc---c---cHH-HHHHHHHcCCCCCCcHHH--------hhhHHHH
Confidence            789999999999999999999999999999999642   2   222 223334455443332211        1234555


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ++..|+..|++.||+.-.+++.+.
T Consensus       260 li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  260 LINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             HHHHHccCCcccCCCcchHHHHHH
Confidence            777999999999998655555443


No 179
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.30  E-value=2.3e-12  Score=87.22  Aligned_cols=86  Identities=23%  Similarity=0.364  Sum_probs=57.7

Q ss_pred             CCcccccCC--ccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDG--QFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~--~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||++.+.  .++.++|+||||++++++++ |..|+......      .+..........+   .         .....
T Consensus       171 ~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~------~~~~~~~~~~~~~---~---------~~~~~  232 (259)
T cd05037         171 IAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS------EKERFYQDQHRLP---M---------PDCAE  232 (259)
T ss_pred             cChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch------hHHHHHhcCCCCC---C---------CCchH
Confidence            579998776  78999999999999999998 46665432211      1111100011000   0         00145


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +.+++.+||..+|++||++.++++.|.
T Consensus       233 ~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         233 LANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             HHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            677889999999999999999998763


No 180
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.30  E-value=5.6e-12  Score=89.56  Aligned_cols=33  Identities=27%  Similarity=0.549  Sum_probs=29.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRN   33 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p   33 (149)
                      +|||++.+..|+.++|||||||++||++++..+
T Consensus       223 ~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~  255 (357)
T PHA03209        223 NAPEVLARDKYNSKADIWSAGIVLFEMLAYPST  255 (357)
T ss_pred             cCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence            589999999999999999999999999986544


No 181
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.30  E-value=3.1e-12  Score=88.17  Aligned_cols=89  Identities=17%  Similarity=0.184  Sum_probs=58.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++|+||+|++++++++|+.||.........   .......... .     ...    .......+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~---~~~~~~~~~~-~-----~~~----~~~~~~~~~~  234 (285)
T cd05630         168 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKEV-Q-----EEY----SEKFSPDARS  234 (285)
T ss_pred             cChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH---HHHHhhhhhh-h-----hhc----CccCCHHHHH
Confidence            6899998889999999999999999999999997532211100   0011100000 0     000    0011234567


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~~  102 (149)
                      ++..||+.||.+|++     +.+++.+
T Consensus       235 li~~~l~~~p~~R~s~~~~~~~~~~~h  261 (285)
T cd05630         235 LCKMLLCKDPKERLGCQGGGAREVKEH  261 (285)
T ss_pred             HHHHHhhcCHHHccCCCCCchHHHHcC
Confidence            888999999999999     7888874


No 182
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.30  E-value=1.1e-12  Score=90.42  Aligned_cols=91  Identities=29%  Similarity=0.368  Sum_probs=62.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|+|||||+++|+++ |..||.....       .........+......         ......+.
T Consensus       188 ~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-------~~~~~~~~~~~~~~~~---------~~~~~~~~  251 (288)
T cd05061         188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-------EQVLKFVMDGGYLDQP---------DNCPERVT  251 (288)
T ss_pred             cCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHcCCCCCCC---------CCCCHHHH
Confidence            57898888889999999999999999998 6777642211       1111111122111110         01124567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +++.+||+.+|++||++.++++.|+...
T Consensus       252 ~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         252 DLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            7889999999999999999999988754


No 183
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.29  E-value=1.9e-12  Score=88.94  Aligned_cols=90  Identities=20%  Similarity=0.220  Sum_probs=58.1

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ++||++.     +..++.++|||++||+++++++|+.||......      ...... ..........       +....
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~------~~~~~~-~~~~~~~~~~-------~~~~~  235 (282)
T cd06643         170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM------RVLLKI-AKSEPPTLAQ-------PSRWS  235 (282)
T ss_pred             cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH------HHHHHH-hhcCCCCCCC-------ccccC
Confidence            5788873     345778999999999999999999987533211      111111 1111111110       01112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ..+.+++.+||+.+|.+||++.++++.-.
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         236 SEFKDFLKKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence            35667888999999999999999987543


No 184
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.29  E-value=3.4e-12  Score=89.31  Aligned_cols=85  Identities=19%  Similarity=0.144  Sum_probs=59.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++|+||+||+++++++|+.||....   ....    ......... ..         +......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~---~~~~----~~~i~~~~~-~~---------~~~~~~~~~~  225 (318)
T cd05570         163 IAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD---EDEL----FQSILEDEV-RY---------PRWLSKEAKS  225 (318)
T ss_pred             cCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC---HHHH----HHHHHcCCC-CC---------CCcCCHHHHH
Confidence            68999999999999999999999999999999975322   1111    111111111 00         0011234667


Q ss_pred             HHHHhcCCCCCCCCCh-----HHHHHH
Q 043384           81 IGLLCVQQHPEDRPCM-----PSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~-----~~vl~~  102 (149)
                      ++.+||+.||.+||++     .+++..
T Consensus       226 li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         226 ILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             HHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            8889999999999999     888764


No 185
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.29  E-value=2.5e-12  Score=88.19  Aligned_cols=99  Identities=13%  Similarity=0.152  Sum_probs=59.5

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcC---C--------------Ccchh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKG---M--------------PSQLI   62 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~--------------~~~~~   62 (149)
                      ++||.+.+ ..++.++|||+||++++++++|+.||......   .............   .              .....
T Consensus       168 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (287)
T cd07840         168 RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL---EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPY  244 (287)
T ss_pred             CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCchhhccccccchhhhhccccccc
Confidence            57897754 45789999999999999999999997543321   1111111111000   0              00000


Q ss_pred             chhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           63 DACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...............+.+++.+||..+|.+||++.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         245 KRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             hhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            0000000001113467889999999999999999999864


No 186
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.29  E-value=2.5e-12  Score=87.29  Aligned_cols=91  Identities=22%  Similarity=0.363  Sum_probs=58.7

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++... .++.++|+|+||++++++++|+.||.......   .   ..... ....... .....   .......+.
T Consensus       173 ~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~---~---~~~~~-~~~~~~~-~~~~~---~~~~~~~~~  241 (267)
T cd06610         173 MAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK---V---LMLTL-QNDPPSL-ETGAD---YKKYSKSFR  241 (267)
T ss_pred             cChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh---h---HHHHh-cCCCCCc-CCccc---cccccHHHH
Confidence            478888766 78899999999999999999999975332111   0   01111 1111111 00000   001224567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +++.+||+.||++||++.+++++
T Consensus       242 ~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         242 KMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HHHHHHcCCChhhCcCHHHHhhC
Confidence            88999999999999999999864


No 187
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.29  E-value=3.3e-12  Score=89.69  Aligned_cols=92  Identities=14%  Similarity=0.259  Sum_probs=61.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||........................ ....         .....+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~p~---------~~~~~~~~  232 (327)
T cd05617         163 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-RIPR---------FLSVKASH  232 (327)
T ss_pred             CCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-CCCC---------CCCHHHHH
Confidence            6899999889999999999999999999999998644333322333333333222211 1100         01134566


Q ss_pred             HHHHhcCCCCCCCCCh------HHHHHH
Q 043384           81 IGLLCVQQHPEDRPCM------PSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~------~~vl~~  102 (149)
                      ++.+||..||.+|+++      .+++.+
T Consensus       233 li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         233 VLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             HHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            8889999999999985      466653


No 188
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.29  E-value=1.7e-12  Score=89.03  Aligned_cols=89  Identities=19%  Similarity=0.144  Sum_probs=57.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+||+++++++|+.||........  ......... ......     ...    .....+.+
T Consensus       161 ~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~-~~~~~~-----~~~----~~~~~~~~  228 (277)
T cd05607         161 MAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL-EDEVKF-----EHQ----NFTEESKD  228 (277)
T ss_pred             cCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh-cccccc-----ccc----cCCHHHHH
Confidence            589999888899999999999999999999999753322111  111111111 111100     000    11234677


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      ++..||+.||.+||++.++++
T Consensus       229 li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         229 ICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HHHHHhccCHhhCCCCccchh
Confidence            888999999999999966553


No 189
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.29  E-value=2.3e-12  Score=88.57  Aligned_cols=89  Identities=20%  Similarity=0.298  Sum_probs=57.8

Q ss_pred             CCcccccC-----CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYASD-----GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~~-----~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      +|||++..     ..++.++|||++||+++++++|+.||.......      .... ...........+       ....
T Consensus       191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~------~~~~-~~~~~~~~~~~~-------~~~~  256 (286)
T cd06638         191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR------ALFK-IPRNPPPTLHQP-------ELWS  256 (286)
T ss_pred             cChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH------HHhh-ccccCCCcccCC-------CCcC
Confidence            57888743     457899999999999999999999875332111      0011 111111111000       0112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ..+.+++.+||+.+|++||++.++++.+
T Consensus       257 ~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         257 NEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            3567788999999999999999999764


No 190
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.29  E-value=1.9e-12  Score=88.11  Aligned_cols=91  Identities=20%  Similarity=0.284  Sum_probs=57.1

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||.+.   ...++.++|+|++|++++++++|+.||....+....      . .+......   .......  ......
T Consensus       173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~------~-~~~~~~~~---~~~~~~~--~~~~~~  240 (267)
T cd06646         173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL------F-LMSKSNFQ---PPKLKDK--TKWSST  240 (267)
T ss_pred             cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh------e-eeecCCCC---CCCCccc--cccCHH
Confidence            5788774   345788999999999999999999886422211100      0 00001000   0000000  011245


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +.+++.+||..+|++||++.++++.|
T Consensus       241 ~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         241 FHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            67889999999999999999999765


No 191
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.29  E-value=7.3e-12  Score=85.98  Aligned_cols=97  Identities=13%  Similarity=0.122  Sum_probs=56.9

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh----------chhhhc-
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI----------DACIQD-   68 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-   68 (149)
                      +|||++.+ ..++.++|||++|++++++++|+.||......   ..........  +.+....          ...... 
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  242 (285)
T cd07861         168 RAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI---DQLFRIFRIL--GTPTEDVWPGVTSLPDYKNTFPKW  242 (285)
T ss_pred             cChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHh--CCCChhhhhcchhhHHHHhhcccc
Confidence            57998765 35788999999999999999999987532211   0000000000  0000000          000000 


Q ss_pred             ------cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           69 ------LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        69 ------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                            .........+.+++.+||..||.+||++.+|+.+
T Consensus       243 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         243 KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                  0000012356689999999999999999999864


No 192
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.29  E-value=8.4e-13  Score=91.86  Aligned_cols=99  Identities=14%  Similarity=0.151  Sum_probs=58.9

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhch-------------hh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDA-------------CI   66 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~   66 (149)
                      +|||++.+ ..++.++||||+|++++++++|+.||........   ......... .........             ..
T Consensus       171 ~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  246 (309)
T cd07872         171 RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE---LHLIFRLLG-TPTEETWPGISSNDEFKNYNFPKY  246 (309)
T ss_pred             cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhC-CCCHHHHhhhcchhhhhhhhcCcc
Confidence            57998765 4588999999999999999999999754322111   111111100 000000000             00


Q ss_pred             --hcccc--HHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           67 --QDLCN--FAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        67 --~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                        .....  ......+.+++.+||+.||.+|+++.+++++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  287 (309)
T cd07872         247 KPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA  287 (309)
T ss_pred             CCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence              00000  00123567899999999999999999999743


No 193
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.29  E-value=3.3e-12  Score=89.54  Aligned_cols=85  Identities=15%  Similarity=0.180  Sum_probs=59.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++||||+||+++|+++|+.||....   ....    ......+.. ..         +......+.+
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~---~~~~----~~~~~~~~~-~~---------p~~~~~~~~~  224 (323)
T cd05571         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---HEKL----FELILMEEI-RF---------PRTLSPEAKS  224 (323)
T ss_pred             cChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC---HHHH----HHHHHcCCC-CC---------CCCCCHHHHH
Confidence            68999998899999999999999999999999974321   1111    111111111 00         0011234667


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||++|+     ++.+++++
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         225 LLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             HHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            88899999999999     79999874


No 194
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.28  E-value=3.4e-12  Score=87.88  Aligned_cols=89  Identities=16%  Similarity=0.139  Sum_probs=59.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      |+||++.+..++.++|||++|++++++++|+.||......   .....+....... ...         .+......+.+
T Consensus       168 ~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~---~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~  234 (285)
T cd05605         168 MAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK---VKREEVERRVKED-QEE---------YSEKFSEAARS  234 (285)
T ss_pred             cCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh---hHHHHHHHHhhhc-ccc---------cCcccCHHHHH
Confidence            5899998888999999999999999999999997532211   1111111111111 100         11112334667


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||..||.+||     ++.+++++
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         235 ICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             HHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            88999999999999     78888764


No 195
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.28  E-value=4.1e-12  Score=89.30  Aligned_cols=92  Identities=14%  Similarity=0.241  Sum_probs=60.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCc--ccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDN--KLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      +|||++.+..++.++||||+||+++++++|+.||.......  ......+.......... ..         +......+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~---------p~~~~~~~  232 (329)
T cd05618         163 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RI---------PRSLSVKA  232 (329)
T ss_pred             cCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CC---------CCCCCHHH
Confidence            58999998899999999999999999999999985332211  11122222222222211 00         00112345


Q ss_pred             HHHHHHhcCCCCCCCCCh------HHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCM------PSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~------~~vl~~  102 (149)
                      .+++.+||+.||.+|+++      .+++.+
T Consensus       233 ~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         233 ASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            678889999999999984      576654


No 196
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.28  E-value=3e-12  Score=87.22  Aligned_cols=88  Identities=17%  Similarity=0.256  Sum_probs=56.4

Q ss_pred             CCcccccCCc--cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQ--FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~--~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ++||++....  ++.++||||+|++++++++|+.||......   ....+....  ....+.         .+......+
T Consensus       176 ~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~---~~~~~~~~~--~~~~~~---------~~~~~~~~~  241 (268)
T cd06624         176 MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP---QAAMFKVGM--FKIHPE---------IPESLSAEA  241 (268)
T ss_pred             cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh---hhhHhhhhh--hccCCC---------CCcccCHHH
Confidence            4788876543  789999999999999999999997432110   000000000  000000         111122345


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+++.+||+.+|.+||++.+++.+
T Consensus       242 ~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         242 KNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             HHHHHHHcCCCchhCCCHHHHHhC
Confidence            678889999999999999999865


No 197
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.28  E-value=1.1e-12  Score=90.85  Aligned_cols=99  Identities=9%  Similarity=0.097  Sum_probs=57.8

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc---CCCcchhc---------hhhh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK---GMPSQLID---------ACIQ   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------~~~~   67 (149)
                      ++||++.+ ..++.++|||++|+++++|++|+.||.......   ....+......   ........         +...
T Consensus       171 ~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (301)
T cd07873         171 RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYR  247 (301)
T ss_pred             cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcCCCChhhchhhhccccccccccCccc
Confidence            57888765 347889999999999999999999975432211   11111111000   00000000         0000


Q ss_pred             ccc----cHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 DLC----NFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 ~~~----~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+    .......+.+++.+||+.||.+||++.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h  286 (301)
T cd07873         248 ADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH  286 (301)
T ss_pred             cccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            000    00012346789999999999999999999974


No 198
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.28  E-value=1.5e-12  Score=89.41  Aligned_cols=97  Identities=16%  Similarity=0.235  Sum_probs=57.4

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh--------------chh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI--------------DAC   65 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~   65 (149)
                      ++||++.+ ..++.++||||||++++++++|+.+|.....   ...........  +......              .+.
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07846         167 RAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD---IDQLYHIIKCL--GNLIPRHQEIFQKNPLFAGMRLPE  241 (286)
T ss_pred             cCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch---HHHHHHHHHHh--CCCchhhHHHhccchHhhcccccc
Confidence            57898765 4577899999999999999999988743211   11100000000  0000000              000


Q ss_pred             hhcccc-----HHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           66 IQDLCN-----FAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        66 ~~~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ......     ......+.+++.+||..+|++||++.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         242 VKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             ccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            000000     0112457889999999999999999999864


No 199
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.28  E-value=3.3e-12  Score=88.05  Aligned_cols=88  Identities=22%  Similarity=0.296  Sum_probs=57.2

Q ss_pred             CCcccccCC-----ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYASDG-----QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~~~-----~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ++||++...     .++.++|+||+||+++++++|+.||......   ..   ... +..+.......+       ....
T Consensus       195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~---~~---~~~-~~~~~~~~~~~~-------~~~~  260 (291)
T cd06639         195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV---KT---LFK-IPRNPPPTLLHP-------EKWC  260 (291)
T ss_pred             cChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---HH---HHH-HhcCCCCCCCcc-------cccC
Confidence            578887543     3689999999999999999999997432211   01   111 111211111111       0112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.+++.+||+.+|++||++.+++++
T Consensus       261 ~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         261 RSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            346778899999999999999999864


No 200
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.28  E-value=4.9e-12  Score=87.46  Aligned_cols=89  Identities=21%  Similarity=0.267  Sum_probs=59.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||+++|++++|+.||...........      ....+.+ ...       ........+.+
T Consensus       182 ~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~------~~~~~~~-~~~-------~~~~~~~~l~~  247 (293)
T cd06647         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL------IATNGTP-ELQ-------NPEKLSAIFRD  247 (293)
T ss_pred             cCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee------hhcCCCC-CCC-------CccccCHHHHH
Confidence            579988888889999999999999999999999754322111100      0001110 000       00111234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+||+.+|++||++.+++.+-
T Consensus       248 li~~~l~~~p~~Rp~~~~il~h~  270 (293)
T cd06647         248 FLNRCLEMDVEKRGSAKELLQHP  270 (293)
T ss_pred             HHHHHccCChhhCcCHHHHhcCH
Confidence            88899999999999999999763


No 201
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.27  E-value=2.9e-12  Score=88.29  Aligned_cols=103  Identities=17%  Similarity=0.132  Sum_probs=64.9

Q ss_pred             Cccccc-CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh----chhhh-----cccc
Q 043384            2 APEYAS-DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI----DACIQ-----DLCN   71 (149)
Q Consensus         2 apE~~~-~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~   71 (149)
                      |||.+. ...|+.+.||||.||++.||++|++.|...+...+..++......-.......+.    .+-+.     ...+
T Consensus       195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~  274 (359)
T KOG0660|consen  195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP  274 (359)
T ss_pred             CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence            688764 4679999999999999999999999887665544444333221110000000000    00000     0111


Q ss_pred             HHH-----HHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           72 FAE-----VIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        72 ~~~-----~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +..     ....++|+.++|..||.+|.|++|.+++.-
T Consensus       275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPY  312 (359)
T KOG0660|consen  275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPY  312 (359)
T ss_pred             HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChh
Confidence            111     246789999999999999999999998643


No 202
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.27  E-value=2.7e-12  Score=87.93  Aligned_cols=98  Identities=11%  Similarity=0.088  Sum_probs=59.0

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhh------------
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQ------------   67 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------   67 (149)
                      ++||.+.+. .++.++|+|++|++++++++|+.+|......   ............. .+........            
T Consensus       165 ~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05118         165 RAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI---DQLFKIFRTLGTP-DPEVWPKFTSLARNYKFSFPKK  240 (283)
T ss_pred             cCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCC-chHhcccchhhhhhhhhhhccc
Confidence            478888765 6889999999999999999999887532211   1111111100000 0000000000            


Q ss_pred             -----ccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 -----DLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 -----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                           ..........+.+++.+||+.||.+||++.+++.+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         241 AGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             cccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence                 00001123467889999999999999999999864


No 203
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.27  E-value=6.1e-12  Score=85.04  Aligned_cols=86  Identities=20%  Similarity=0.262  Sum_probs=59.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|+||++++++++|..||....      ........ ..+......         ......+.+
T Consensus       169 ~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~-~~~~~~~~~---------~~~~~~~~~  232 (257)
T cd08225         169 LSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKI-CQGYFAPIS---------PNFSRDLRS  232 (257)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHH-hcccCCCCC---------CCCCHHHHH
Confidence            47898888889999999999999999999999974321      11111111 111111111         011235667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.+++++
T Consensus       233 ~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         233 LISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHhccChhhCcCHHHHhhC
Confidence            8889999999999999999865


No 204
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.27  E-value=6.3e-12  Score=85.24  Aligned_cols=90  Identities=22%  Similarity=0.275  Sum_probs=60.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|..||.......   ..... ........+....     .   .....+.+
T Consensus       167 ~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~---~~~~~-~~~~~~~~~~~~~-----~---~~~~~l~~  234 (264)
T cd06623         167 MSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS---FFELM-QAICDGPPPSLPA-----E---EFSPEFRD  234 (264)
T ss_pred             cCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC---HHHHH-HHHhcCCCCCCCc-----c---cCCHHHHH
Confidence            47898888888999999999999999999999975443211   11111 1111111111110     0   02245677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|.+||++.+++++
T Consensus       235 li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         235 FISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHccCChhhCCCHHHHHhC
Confidence            8889999999999999999974


No 205
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.27  E-value=7.2e-12  Score=86.67  Aligned_cols=91  Identities=20%  Similarity=0.294  Sum_probs=58.7

Q ss_pred             CCcccccCCc----cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDGQ----FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~~----~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      +|||++.+..    ++.++|+||||++++++++|+.||.....  .   ........ ..........   .    ....
T Consensus       181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~---~~~~~~~~-~~~~~~~~~~---~----~~~~  247 (296)
T cd06618         181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT--E---FEVLTKIL-QEEPPSLPPN---E----GFSP  247 (296)
T ss_pred             cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh--H---HHHHHHHh-cCCCCCCCCC---C----CCCH
Confidence            5788876543    78899999999999999999999753211  1   11111111 1111111000   0    1123


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .+.+++.+||..||.+||++.+++++..
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il~~~~  275 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELLQHPF  275 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcChh
Confidence            5677888999999999999999997643


No 206
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.27  E-value=4.8e-12  Score=85.62  Aligned_cols=87  Identities=24%  Similarity=0.328  Sum_probs=59.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|||++|++++++++|..||....   .   ...... ...+......         ......+.+
T Consensus       168 ~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~---~---~~~~~~-~~~~~~~~~~---------~~~~~~~~~  231 (256)
T cd08221         168 MSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN---P---LNLVVK-IVQGNYTPVV---------SVYSSELIS  231 (256)
T ss_pred             cCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC---H---HHHHHH-HHcCCCCCCc---------cccCHHHHH
Confidence            47888888888899999999999999999999875321   1   111111 1122221111         111234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+||..+|++||++.++++.+
T Consensus       232 ~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         232 LVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHcccCcccCCCHHHHhhCc
Confidence            88899999999999999999764


No 207
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.27  E-value=2.3e-12  Score=88.43  Aligned_cols=99  Identities=16%  Similarity=0.131  Sum_probs=58.5

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc-----------CCC-cchhchhhh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK-----------GMP-SQLIDACIQ   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~   67 (149)
                      ++||++.+ ..++.++|+||+|++++++++|+.||........  . .........           ... .....+...
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T cd07847         167 RAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ--L-YLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPE  243 (286)
T ss_pred             CCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH--H-HHHHHHhCCCChHHhhhcccccccccccCCCcc
Confidence            47888765 5578999999999999999999999753322111  1 111110000           000 000000000


Q ss_pred             ccccHH-----HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 DLCNFA-----EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 ~~~~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...+..     ....+.+++.+||+.+|++||++.+++.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         244 TREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             cccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            000111     12457789999999999999999999864


No 208
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.27  E-value=4.7e-12  Score=86.95  Aligned_cols=100  Identities=10%  Similarity=0.027  Sum_probs=57.0

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCC---------Ccch-hchhhhcc
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGM---------PSQL-IDACIQDL   69 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~   69 (149)
                      +|||++.+. .++.++|||++|++++++++|..|+...  .........+........         .+.. ........
T Consensus       166 ~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd07839         166 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG--NDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPAT  243 (284)
T ss_pred             cChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC--CCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCc
Confidence            579988664 4789999999999999999998874211  111111111111100000         0000 00000000


Q ss_pred             cc-----HHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           70 CN-----FAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        70 ~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..     ......+.+++.+||+.||.+|||+.+++.+
T Consensus       244 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         244 TSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             chhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            00     0112356789999999999999999999864


No 209
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.27  E-value=1.4e-12  Score=91.95  Aligned_cols=99  Identities=13%  Similarity=0.123  Sum_probs=59.2

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchh--------hhc--c
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDAC--------IQD--L   69 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~   69 (149)
                      +|||++.+ ..++.++||||+||+++++++|+.||......   .......... ...........        ...  .
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  257 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI---DQLKRIMEVV-GTPSPEVLKKISSEHARKYIQSLPH  257 (343)
T ss_pred             cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHHHh-CCCCHHHHHhcchhhHHHHhhcccc
Confidence            58999876 56889999999999999999999997532211   1111111000 00000000000        000  0


Q ss_pred             cc---HH-----HHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           70 CN---FA-----EVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        70 ~~---~~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .+   ..     ....+.+|+.+||..||.+||++.+++.+-
T Consensus       258 ~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp  299 (343)
T cd07878         258 MPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP  299 (343)
T ss_pred             ccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence            00   00     112467899999999999999999999753


No 210
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.27  E-value=3e-12  Score=87.52  Aligned_cols=89  Identities=28%  Similarity=0.404  Sum_probs=60.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+..++.++|||++|++++++++ |..||....   ....    ......+......        .......+.
T Consensus       185 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~---~~~~----~~~~~~~~~~~~~--------~~~~~~~l~  249 (275)
T cd05046         185 LAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLS---DEEV----LNRLQAGKLELPV--------PEGCPSRLY  249 (275)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccc---hHHH----HHHHHcCCcCCCC--------CCCCCHHHH
Confidence            57898888888899999999999999998 677763221   1111    1111111111000        011224567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +++.+||..+|.+||++.+++..|.
T Consensus       250 ~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         250 KLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHHhc
Confidence            7899999999999999999999875


No 211
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.27  E-value=4.8e-12  Score=88.93  Aligned_cols=89  Identities=17%  Similarity=0.157  Sum_probs=57.6

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+. .++.++||||+||+++++++|..||.........   ...........+. .         +......+.
T Consensus       173 ~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~~~~~~~~~~~~~-~---------~~~~~~~~~  239 (332)
T cd05614         173 MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ---SEVSRRILKCDPP-F---------PSFIGPEAQ  239 (332)
T ss_pred             cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH---HHHHHHHhcCCCC-C---------CCCCCHHHH
Confidence            689998764 4788999999999999999999998543221111   1111111111110 0         001123456


Q ss_pred             HHHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      +++.+||+.||++|+     ++.+++++
T Consensus       240 ~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         240 DLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             HHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            788899999999999     67788864


No 212
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.27  E-value=8.2e-12  Score=84.96  Aligned_cols=90  Identities=22%  Similarity=0.323  Sum_probs=59.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|..||........   .............+         ..+......+.+
T Consensus       175 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~~~~  242 (268)
T cd06630         175 MAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH---LALIFKIASATTAP---------SIPEHLSPGLRD  242 (268)
T ss_pred             eCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch---HHHHHHHhccCCCC---------CCchhhCHHHHH
Confidence            478888888889999999999999999999999753221111   11111111111111         111112345667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.++++.
T Consensus       243 ~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         243 VTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             HHHHHcCCCcccCcCHHHHhcC
Confidence            8889999999999999999853


No 213
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.27  E-value=1.5e-11  Score=84.42  Aligned_cols=96  Identities=15%  Similarity=0.167  Sum_probs=57.7

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc-CCCcchh--------------ch
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK-GMPSQLI--------------DA   64 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~   64 (149)
                      +|||++.+. .++.++|+|++|++++++++|+.||.......      ........ +.+....              ..
T Consensus       166 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd07835         166 RAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID------QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPK  239 (283)
T ss_pred             CCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHhCCCChHHhhhhhhchhhhhhccc
Confidence            589988664 47889999999999999999999875322111      11111100 0000000              00


Q ss_pred             hhhcc---ccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           65 CIQDL---CNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        65 ~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .....   ........+.+++.+||+.+|.+||++.++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         240 WARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             ccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            00000   000011357789999999999999999999864


No 214
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.26  E-value=1.5e-11  Score=84.44  Aligned_cols=96  Identities=14%  Similarity=0.185  Sum_probs=57.1

Q ss_pred             CCcccccCCc-cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh-----------------
Q 043384            1 MAPEYASDGQ-FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI-----------------   62 (149)
Q Consensus         1 ~apE~~~~~~-~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   62 (149)
                      +|||++.+.. ++.++|||+||++++++++|+.||....   ............  +.+....                 
T Consensus       167 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd07860         167 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS---EIDQLFRIFRTL--GTPDEVVWPGVTSLPDYKPSFPKW  241 (284)
T ss_pred             cCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---HHHHHHHHHHHh--CCCChhhhhhhhHHHHHHhhcccc
Confidence            5799876644 5788999999999999999999875321   111111111100  0000000                 


Q ss_pred             -chhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           63 -DACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        63 -~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       ........ ......+.+++.+||+.||.+||++.+++.+
T Consensus       242 ~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         242 ARQDFSKVV-PPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             cccCHHHHc-ccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence             00000000 0012346678999999999999999999864


No 215
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.26  E-value=1.8e-12  Score=95.40  Aligned_cols=85  Identities=19%  Similarity=0.193  Sum_probs=59.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||....   ..   ....... .+......         ......+.+
T Consensus       238 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~---~~---~~~~~~~-~~~~~~~~---------~~~s~~~~~  301 (478)
T PTZ00267        238 LAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS---QR---EIMQQVL-YGKYDPFP---------CPVSSGMKA  301 (478)
T ss_pred             cCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC---HH---HHHHHHH-hCCCCCCC---------ccCCHHHHH
Confidence            68999988899999999999999999999999975321   11   1111111 11111100         011234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      ++.+||+.+|++||++.+++.
T Consensus       302 li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        302 LLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHhccChhhCcCHHHHHh
Confidence            888999999999999999875


No 216
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.26  E-value=5.4e-12  Score=96.18  Aligned_cols=89  Identities=15%  Similarity=0.108  Sum_probs=60.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++|||+|||++||+++|+.||....      ........+........    ..    ......+.+
T Consensus       547 ~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~------~~~~~~~il~~~~~~p~----~~----~~~~~~~~~  612 (669)
T cd05610         547 LAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET------PQQVFQNILNRDIPWPE----GE----EKLSVNAQN  612 (669)
T ss_pred             cCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHHHHhcCCCCCc----cc----ccCCHHHHH
Confidence            68999999899999999999999999999999975321      11111111111111000    00    011234566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++..||..||.+||++.+++++-
T Consensus       613 ~l~~lL~~dP~~R~ta~e~l~h~  635 (669)
T cd05610         613 AIEILLTMDPTKRAGLKELKQHP  635 (669)
T ss_pred             HHHHHcccChhHCcCHHHHHhCH
Confidence            78899999999999999999854


No 217
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.26  E-value=4.5e-12  Score=86.72  Aligned_cols=87  Identities=22%  Similarity=0.358  Sum_probs=57.7

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.++ .++.++|+|+||+++|++++|+.||.......      .. .......++....        ......+.
T Consensus       168 ~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~------~~-~~~~~~~~~~~~~--------~~~~~~~~  232 (277)
T cd06917         168 MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR------AM-MLIPKSKPPRLED--------NGYSKLLR  232 (277)
T ss_pred             eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh------hh-hccccCCCCCCCc--------ccCCHHHH
Confidence            478887653 46889999999999999999999975332111      00 0111111111110        01234567


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +++.+||..||++||++.+++.+
T Consensus       233 ~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         233 EFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             HHHHHHcCCCcccCcCHHHHhhC
Confidence            78899999999999999999874


No 218
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.26  E-value=1.5e-11  Score=84.43  Aligned_cols=99  Identities=10%  Similarity=0.081  Sum_probs=59.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCC----Ccc------hhchhhhcc-
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGM----PSQ------LIDACIQDL-   69 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~------~~~~~~~~~-   69 (149)
                      ++||++.+..++.++|+|+||++++++++|+.+|.....   ......+........    +..      ......... 
T Consensus       173 ~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (287)
T cd07838         173 RAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE---ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSF  249 (287)
T ss_pred             cChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh---HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccch
Confidence            479999888899999999999999999999888653221   111111111100000    000      000000000 


Q ss_pred             --ccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           70 --CNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        70 --~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                        ....-...+.+++.+||+.||.+||++.+++.+
T Consensus       250 ~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         250 KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence              000112456789999999999999999999853


No 219
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.26  E-value=2.1e-12  Score=90.13  Aligned_cols=85  Identities=14%  Similarity=0.115  Sum_probs=57.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||....      . ............ ..         +......+.+
T Consensus       160 ~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~------~-~~~~~~~~~~~~-~~---------~~~~~~~~~~  222 (312)
T cd05585         160 LAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN------V-NEMYRKILQEPL-RF---------PDGFDRDAKD  222 (312)
T ss_pred             CCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC------H-HHHHHHHHcCCC-CC---------CCcCCHHHHH
Confidence            68999998899999999999999999999999975321      1 111111111111 00         0011234567


Q ss_pred             HHHHhcCCCCCCCCC---hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC---MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps---~~~vl~~  102 (149)
                      ++.+||..||.+|++   +.+++.+
T Consensus       223 li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         223 LLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             HHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            888999999999985   5666653


No 220
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.26  E-value=2.6e-11  Score=82.80  Aligned_cols=92  Identities=18%  Similarity=0.300  Sum_probs=54.8

Q ss_pred             CCcccccC-------CccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccH
Q 043384            1 MAPEYASD-------GQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNF   72 (149)
Q Consensus         1 ~apE~~~~-------~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (149)
                      +|||++..       ..++.++||||||++++|+++ +..||....   ......   .... +......++.....+  
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~---~~~~~~---~~~~-~~~~~~~~~~~~~~~--  238 (268)
T cd05086         168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS---DREVLN---HVIK-DQQVKLFKPQLELPY--  238 (268)
T ss_pred             cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC---HHHHHH---HHHh-hcccccCCCccCCCC--
Confidence            47887642       245789999999999999986 466754321   111111   1111 111111122211111  


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           73 AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        73 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                        ...+.+++..|| .+|++||++.+|++.|.
T Consensus       239 --~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         239 --SERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             --cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence              234556778899 67999999999998874


No 221
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.26  E-value=1.4e-11  Score=82.97  Aligned_cols=88  Identities=20%  Similarity=0.374  Sum_probs=59.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|||++|++++++++|+.||....     ...................         ......+.+
T Consensus       170 ~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~  235 (260)
T cd06606         170 MAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG-----NPMAALYKIGSSGEPPEIP---------EHLSEEAKD  235 (260)
T ss_pred             cCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----chHHHHHhccccCCCcCCC---------cccCHHHHH
Confidence            47888888788999999999999999999999975433     1111111111101111111         111345667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|++||++.++++.
T Consensus       236 ~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         236 FLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             HHHHhCcCChhhCCCHHHHhhC
Confidence            8889999999999999999864


No 222
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.26  E-value=7.2e-12  Score=86.95  Aligned_cols=98  Identities=13%  Similarity=0.189  Sum_probs=58.8

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcch-----------hchhhh-
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQL-----------IDACIQ-   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-   67 (149)
                      +|||++.+ ..++.++||||+||+++++++|..||.....  .......+....  +.+...           ...... 
T Consensus       170 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  245 (303)
T cd07869         170 RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD--IQDQLERIFLVL--GTPNEDTWPGVHSLPHFKPERFTL  245 (303)
T ss_pred             CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHHh--CCCChhhccchhhccccccccccc
Confidence            68998865 4578899999999999999999999864321  111111111111  000000           000000 


Q ss_pred             -ccccHH-------HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 -DLCNFA-------EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 -~~~~~~-------~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       ......       ....+.+++.+||+.||.+|+|+.+++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h  288 (303)
T cd07869         246 YSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH  288 (303)
T ss_pred             cCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence             000000       01346789999999999999999999974


No 223
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.26  E-value=1.5e-11  Score=84.87  Aligned_cols=88  Identities=22%  Similarity=0.320  Sum_probs=57.0

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ++||++.     ...++.++|+|+|||++|++++|..||.....      . ...........+....       +....
T Consensus       177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~-~~~~~~~~~~~~~~~~-------~~~~~  242 (292)
T cd06644         177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------M-RVLLKIAKSEPPTLSQ-------PSKWS  242 (292)
T ss_pred             cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH------H-HHHHHHhcCCCccCCC-------CcccC
Confidence            5788874     34577899999999999999999998643221      1 1111111111111110       01112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.+++.+||..+|++||++.++++.
T Consensus       243 ~~~~~li~~~l~~~p~~Rp~~~~il~~  269 (292)
T cd06644         243 MEFRDFLKTALDKHPETRPSAAQLLEH  269 (292)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            346678889999999999999999874


No 224
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.25  E-value=1.6e-11  Score=82.89  Aligned_cols=87  Identities=34%  Similarity=0.531  Sum_probs=58.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+.+..++.++|+|++|++++++++ |+.||...   ......    .............         .....+.
T Consensus       171 ~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~---~~~~~~----~~~~~~~~~~~~~---------~~~~~~~  234 (258)
T smart00219      171 MAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM---SNEEVL----EYLKKGYRLPKPE---------NCPPEIY  234 (258)
T ss_pred             cChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---CHHHHH----HHHhcCCCCCCCC---------cCCHHHH
Confidence            57888877889999999999999999998 77776432   111111    1111121111100         1234566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +++.+||..+|.+||++.++++.|
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      235 KLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHCcCChhhCcCHHHHHhhC
Confidence            788899999999999999998764


No 225
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.25  E-value=4.9e-12  Score=85.84  Aligned_cols=88  Identities=22%  Similarity=0.400  Sum_probs=57.3

Q ss_pred             CCcccccCCc---cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDGQ---FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~~---~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||++.+..   ++.++|||+||++++++++|+.||......     ...... ...+..+.... .      ......
T Consensus       170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-----~~~~~~-~~~~~~~~~~~-~------~~~~~~  236 (264)
T cd06626         170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-----FQIMFH-VGAGHKPPIPD-S------LQLSPE  236 (264)
T ss_pred             cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-----HHHHHH-HhcCCCCCCCc-c------cccCHH
Confidence            4788887665   889999999999999999999997533211     011111 11111111100 0      001234


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      +.+++.+||+.+|++||++.+++.
T Consensus       237 ~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         237 GKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhc
Confidence            567888999999999999999875


No 226
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.25  E-value=1.5e-11  Score=87.16  Aligned_cols=99  Identities=14%  Similarity=0.113  Sum_probs=60.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHH------------------hcCCCcc--
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLW------------------NKGMPSQ--   60 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~--   60 (149)
                      +|||++.+..++.++||||+||+++++++|+.||.......   ....+....                  ....+..  
T Consensus       184 ~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (353)
T cd07850         184 RAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID---QWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAG  260 (353)
T ss_pred             cCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCC
Confidence            57999988889999999999999999999999875332111   111110000                  0000000  


Q ss_pred             -----hhchhhh----ccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           61 -----LIDACIQ----DLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        61 -----~~~~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                           .......    ..........+.+++.+||+.||.+||++.+++.+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         261 YSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             cchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence                 0000000    00000123456789999999999999999999974


No 227
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.25  E-value=6.4e-12  Score=88.08  Aligned_cols=85  Identities=18%  Similarity=0.156  Sum_probs=57.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++|+|||||+++++++|+.||.....   ....    ..+..+... .         +......+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~~~----~~i~~~~~~-~---------p~~~~~~~~~  230 (324)
T cd05589         168 LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EEVF----DSIVNDEVR-Y---------PRFLSREAIS  230 (324)
T ss_pred             cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HHHH----HHHHhCCCC-C---------CCCCCHHHHH
Confidence            689999988999999999999999999999999753221   1111    111111110 0         0011234567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||.+||     ++.+++++
T Consensus       231 li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         231 IMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             HHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            88899999999999     56777764


No 228
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.25  E-value=5.9e-12  Score=85.78  Aligned_cols=88  Identities=24%  Similarity=0.315  Sum_probs=56.9

Q ss_pred             CCcccccC-----CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYASD-----GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~~-----~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      +|||++..     ..++.++|||++|++++++++|..||......      ..... ...........       .....
T Consensus       180 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~~~~-------~~~~~  245 (275)
T cd06608         180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM------RALFK-IPRNPPPTLKS-------PENWS  245 (275)
T ss_pred             cCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH------HHHHH-hhccCCCCCCc-------hhhcC
Confidence            57887643     34778999999999999999999997432111      11111 11111111110       11122


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.+++.+||..||.+||++.+++++
T Consensus       246 ~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         246 KKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            356678899999999999999999864


No 229
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.25  E-value=1.1e-11  Score=85.15  Aligned_cols=89  Identities=25%  Similarity=0.359  Sum_probs=58.1

Q ss_pred             CCcccccCC------ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHH
Q 043384            1 MAPEYASDG------QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAE   74 (149)
Q Consensus         1 ~apE~~~~~------~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (149)
                      ++||++.+.      .++.++|+|++||+++++++|+.||.....   ......... ...+.+...         +...
T Consensus       168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~~~~-~~~~~~~~~---------~~~~  234 (286)
T cd06622         168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY---ANIFAQLSA-IVDGDPPTL---------PSGY  234 (286)
T ss_pred             cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch---hhHHHHHHH-HhhcCCCCC---------Cccc
Confidence            478887543      357899999999999999999999753221   111111111 111222111         1112


Q ss_pred             HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           75 VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        75 ~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...+.+++.+||+.+|++||++.+++..
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         235 SDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            3456678889999999999999999974


No 230
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.25  E-value=3e-12  Score=89.52  Aligned_cols=84  Identities=21%  Similarity=0.225  Sum_probs=57.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||.....   ...    ........+.  ..        ......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~----~~~i~~~~~~--~~--------~~~~~~~~~  225 (316)
T cd05619         163 IAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EEL----FQSIRMDNPC--YP--------RWLTREAKD  225 (316)
T ss_pred             cCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHH----HHHHHhCCCC--CC--------ccCCHHHHH
Confidence            689999888899999999999999999999999753221   111    1111111110  00        011234567


Q ss_pred             HHHHhcCCCCCCCCChH-HHHH
Q 043384           81 IGLLCVQQHPEDRPCMP-SVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~-~vl~  101 (149)
                      ++.+||+.||.+|+++. ++++
T Consensus       226 li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         226 ILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHHHHhccCHhhcCCChHHHHc
Confidence            88899999999999996 6654


No 231
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.25  E-value=6.7e-12  Score=86.25  Aligned_cols=89  Identities=15%  Similarity=0.098  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||||++++++++|+.||........   ........... ...         .+......+.+
T Consensus       164 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~-~~~---------~~~~~~~~~~~  230 (280)
T cd05608         164 MAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE---NKELKQRILND-SVT---------YPDKFSPASKS  230 (280)
T ss_pred             cCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh---HHHHHHhhccc-CCC---------CcccCCHHHHH
Confidence            689999999999999999999999999999999753221110   00111111011 000         01112234667


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||++|+     ++.+++.+
T Consensus       231 li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         231 FCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             HHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            88899999999999     66777764


No 232
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.25  E-value=5.3e-12  Score=88.23  Aligned_cols=92  Identities=23%  Similarity=0.286  Sum_probs=60.0

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||++.   .+.++.++|||+||++++++++|+.||....      ............... ..        .......
T Consensus       188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~------~~~~~~~~~~~~~~~-~~--------~~~~~~~  252 (317)
T cd06635         188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN------AMSALYHIAQNESPT-LQ--------SNEWSDY  252 (317)
T ss_pred             cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHhccCCC-CC--------CccccHH
Confidence            5788873   4568899999999999999999999864221      111111111111111 00        0011234


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +.+++.+||+.+|.+||++.++++.+....
T Consensus       253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            667888999999999999999998765433


No 233
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.25  E-value=4.5e-12  Score=88.23  Aligned_cols=92  Identities=22%  Similarity=0.248  Sum_probs=59.6

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||++.   ...++.++|||||||+++++++|..||.....      ....... ..+..+...        .......
T Consensus       178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~-~~~~~~~~~--------~~~~~~~  242 (308)
T cd06634         178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHI-AQNESPALQ--------SGHWSEY  242 (308)
T ss_pred             cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH------HHHHHHH-hhcCCCCcC--------cccccHH
Confidence            5788864   35678899999999999999999988642211      1111111 111111110        1112234


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      +.+++.+||..+|++||++.+++.......
T Consensus       243 ~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             HHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            667888999999999999999998755433


No 234
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.24  E-value=5e-12  Score=86.96  Aligned_cols=88  Identities=18%  Similarity=0.217  Sum_probs=58.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|..||......      ..... ............       ......+.+
T Consensus       183 ~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~~~~~-------~~~~~~l~~  248 (286)
T cd06614         183 MAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL------RALFL-ITTKGIPPLKNP-------EKWSPEFKD  248 (286)
T ss_pred             CCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-HHhcCCCCCcch-------hhCCHHHHH
Confidence            4789888888999999999999999999999997532211      11111 111111111100       001234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|.+||++.++++.
T Consensus       249 li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         249 FLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             HHHHHhccChhhCcCHHHHhhC
Confidence            8889999999999999999864


No 235
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.24  E-value=3e-12  Score=89.65  Aligned_cols=85  Identities=15%  Similarity=0.140  Sum_probs=58.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||.....   .    .....+..+... . .        ......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~----~~~~~i~~~~~~-~-~--------~~~~~~~~~  225 (320)
T cd05590         163 IAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---D----DLFEAILNDEVV-Y-P--------TWLSQDAVD  225 (320)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---H----HHHHHHhcCCCC-C-C--------CCCCHHHHH
Confidence            689999888899999999999999999999999753321   1    111112122110 0 0        001234567


Q ss_pred             HHHHhcCCCCCCCCCh------HHHHHH
Q 043384           81 IGLLCVQQHPEDRPCM------PSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~------~~vl~~  102 (149)
                      ++.+||+.||.+|+++      .+++.+
T Consensus       226 li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         226 ILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             HHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            8889999999999998      666653


No 236
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.24  E-value=5e-12  Score=87.08  Aligned_cols=88  Identities=18%  Similarity=0.248  Sum_probs=59.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|||+||++++++++|+.||....   .   ...... ......+....       .......+.+
T Consensus       182 ~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~---~---~~~~~~-~~~~~~~~~~~-------~~~~~~~l~~  247 (285)
T cd06648         182 MAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP---P---LQAMKR-IRDNLPPKLKN-------LHKVSPRLRS  247 (285)
T ss_pred             cCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC---H---HHHHHH-HHhcCCCCCcc-------cccCCHHHHH
Confidence            57898888889999999999999999999999864221   1   111111 11111111100       0011235677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.+++++
T Consensus       248 li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         248 FLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             HHHHHcccChhhCcCHHHHccC
Confidence            8899999999999999999964


No 237
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.24  E-value=3.6e-12  Score=86.25  Aligned_cols=92  Identities=25%  Similarity=0.365  Sum_probs=59.6

Q ss_pred             CCccccc-CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYAS-DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~-~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++. +..++.++|+|++|++++++++|..||..................       .......   ........+.
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~~l~  234 (260)
T PF00069_consen  165 MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR-------PLPSSSQ---QSREKSEELR  234 (260)
T ss_dssp             SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT-------HHHHHTT---SHTTSHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc-------ccccccc---ccchhHHHHH
Confidence            5899988 788999999999999999999999997543111111111111100       0000000   0000115677


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +++..||+.||.+||++.+++++
T Consensus       235 ~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  235 DLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             HHHHHHccCChhHCcCHHHHhcC
Confidence            88999999999999999999864


No 238
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.24  E-value=8.6e-12  Score=90.13  Aligned_cols=87  Identities=16%  Similarity=0.184  Sum_probs=62.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+...+..+|+|+|||++|.|+.|.+||...   .+.....++... .-..+             ..+...+.+
T Consensus       254 VSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~---NeyliFqkI~~l-~y~fp-------------~~fp~~a~d  316 (604)
T KOG0592|consen  254 VSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA---NEYLIFQKIQAL-DYEFP-------------EGFPEDARD  316 (604)
T ss_pred             cCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc---cHHHHHHHHHHh-cccCC-------------CCCCHHHHH
Confidence            4799999999999999999999999999999997532   222232222221 11111             111245667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      |+.+.|.+||.+|.+..+|.++..
T Consensus       317 Lv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  317 LIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             HHHHHHccCccccccHHHHhhCcc
Confidence            888999999999999999998643


No 239
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.23  E-value=6e-12  Score=87.20  Aligned_cols=88  Identities=19%  Similarity=0.260  Sum_probs=58.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|+||++++++++|..||..........      .....+.+. ...       +......+.+
T Consensus       182 ~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~------~~~~~~~~~-~~~-------~~~~~~~~~~  247 (297)
T cd06656         182 MAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNGTPE-LQN-------PERLSAVFRD  247 (297)
T ss_pred             cCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee------eeccCCCCC-CCC-------ccccCHHHHH
Confidence            47888888888999999999999999999999975332211100      000011110 000       0111233567


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.+++++
T Consensus       248 li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         248 FLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             HHHHHccCChhhCcCHHHHhcC
Confidence            8889999999999999999974


No 240
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.23  E-value=7.8e-12  Score=85.66  Aligned_cols=96  Identities=17%  Similarity=0.177  Sum_probs=58.6

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcc------------------h
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQ------------------L   61 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~   61 (149)
                      ++||++.. ..++.++|||++||+++++++|..||......   ....+.....  +....                  .
T Consensus       165 ~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  239 (282)
T cd07831         165 RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL---DQIAKIHDVL--GTPDAEVLKKFRKSRHMNYNFPSK  239 (282)
T ss_pred             CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH---HHHHHHHHHc--CCCCHHHHHhhcccccccccCccc
Confidence            57897644 55788999999999999999999987543211   1111111100  00000                  0


Q ss_pred             hchhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           62 IDACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ........ .......+.+++.+||..+|++||++.++++.
T Consensus       240 ~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         240 KGTGLRKL-LPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             ccccHHHH-cccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            00000000 00113567889999999999999999999864


No 241
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.23  E-value=4.2e-12  Score=87.74  Aligned_cols=86  Identities=13%  Similarity=0.052  Sum_probs=59.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+||+++++++|+.||....   ....    ......+... .         +......+.+
T Consensus       165 ~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~---~~~~----~~~i~~~~~~-~---------~~~~~~~~~~  227 (291)
T cd05612         165 LAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN---PFGI----YEKILAGKLE-F---------PRHLDLYAKD  227 (291)
T ss_pred             cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHH----HHHHHhCCcC-C---------CccCCHHHHH
Confidence            58999988889999999999999999999999975321   1111    1111111110 0         0011234567


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~~l  103 (149)
                      ++.+||+.||.+|++     +.+++++.
T Consensus       228 li~~~l~~dp~~R~~~~~~~~~~~l~h~  255 (291)
T cd05612         228 LIKKLLVVDRTRRLGNMKNGADDVKNHR  255 (291)
T ss_pred             HHHHHcCCCHHHccCCccCCHHHHhcCc
Confidence            888999999999995     88888653


No 242
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.23  E-value=4.9e-12  Score=86.68  Aligned_cols=86  Identities=22%  Similarity=0.337  Sum_probs=59.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|+||++++++++|..||......       ...........+..         .......+.+
T Consensus       168 ~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~---------~~~~~~~~~~  231 (277)
T cd06641         168 MAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-------KVLFLIPKNNPPTL---------EGNYSKPLKE  231 (277)
T ss_pred             cChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-------HHHHHHhcCCCCCC---------CcccCHHHHH
Confidence            5789888888889999999999999999999987432110       11111111111111         0111234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|.+||++.+++++
T Consensus       232 ~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         232 FVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHccCChhhCcCHHHHHhC
Confidence            8889999999999999999985


No 243
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.23  E-value=8.8e-12  Score=85.86  Aligned_cols=89  Identities=15%  Similarity=0.136  Sum_probs=57.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+|++|++++++++|..||......   ............... .         ........+.+
T Consensus       168 ~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~---~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~  234 (285)
T cd05632         168 MAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK---VKREEVDRRVLETEE-V---------YSAKFSEEAKS  234 (285)
T ss_pred             cChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhhhcccc-c---------cCccCCHHHHH
Confidence            5899998888999999999999999999999997532211   111111111111110 0         00111234567


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~~  102 (149)
                      ++..||+.||++||+     +.+++.+
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         235 ICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             HHHHHccCCHhHcCCCcccChHHHHcC
Confidence            888999999999999     5666653


No 244
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.23  E-value=5.5e-12  Score=87.43  Aligned_cols=88  Identities=17%  Similarity=0.230  Sum_probs=59.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|||+||++++++++|+.||.....   ...   .. .+........ . ..     ......+.+
T Consensus       184 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~---~~-~~~~~~~~~~-~-~~-----~~~~~~l~~  249 (297)
T cd06659         184 MAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---VQA---MK-RLRDSPPPKL-K-NA-----HKISPVLRD  249 (297)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHH---HH-HHhccCCCCc-c-cc-----CCCCHHHHH
Confidence            589999888899999999999999999999999742211   111   11 1111111000 0 00     011234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||+.+|.+||++.++++.
T Consensus       250 ~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         250 FLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHhcCCcccCcCHHHHhhC
Confidence            8889999999999999999985


No 245
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.23  E-value=2e-11  Score=89.38  Aligned_cols=102  Identities=10%  Similarity=0.108  Sum_probs=59.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCC-cccchHHHHHHHHhcCC-----Ccchhchhhh-------
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSD-NKLNLIGHAWKLWNKGM-----PSQLIDACIQ-------   67 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------   67 (149)
                      ||||++.+..++.++|||||||++||+++|..++-..... ........+...+....     .+........       
T Consensus       329 ~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~  408 (461)
T PHA03211        329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRA  408 (461)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhh
Confidence            6899998888999999999999999999887653211111 11111111111111111     0000000000       


Q ss_pred             --------ccccHHH----HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 --------DLCNFAE----VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 --------~~~~~~~----~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                              ....+..    ...+.+|+.+||..||.+||++.|++++
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        409 ARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                    0000110    1246778999999999999999999975


No 246
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.23  E-value=1.2e-11  Score=86.78  Aligned_cols=85  Identities=16%  Similarity=0.197  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||......   ..    ......... ..         +......+.+
T Consensus       162 ~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~----~~~~~~~~~-~~---------p~~~~~~~~~  224 (323)
T cd05595         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RL----FELILMEEI-RF---------PRTLSPEAKS  224 (323)
T ss_pred             CCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HH----HHHHhcCCC-CC---------CCCCCHHHHH
Confidence            6899999889999999999999999999999997532211   11    111111111 00         0011234567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||++|+     ++.+++++
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         225 LLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             HHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            88899999999998     88888864


No 247
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.23  E-value=1.3e-11  Score=86.26  Aligned_cols=84  Identities=20%  Similarity=0.201  Sum_probs=57.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+||+++++++|+.||....   ....    ........+ ....         .....+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~---~~~~----~~~~~~~~~-~~~~---------~~~~~~~~  225 (316)
T cd05620         163 IAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD---EDEL----FESIRVDTP-HYPR---------WITKESKD  225 (316)
T ss_pred             cCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHH----HHHHHhCCC-CCCC---------CCCHHHHH
Confidence            58999999899999999999999999999999975321   1111    111111111 0000         01234567


Q ss_pred             HHHHhcCCCCCCCCChH-HHHH
Q 043384           81 IGLLCVQQHPEDRPCMP-SVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~-~vl~  101 (149)
                      ++.+||+.||.+|+++. ++++
T Consensus       226 li~~~l~~dP~~R~~~~~~~~~  247 (316)
T cd05620         226 ILEKLFERDPTRRLGVVGNIRG  247 (316)
T ss_pred             HHHHHccCCHHHcCCChHHHHc
Confidence            88899999999999984 6654


No 248
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.23  E-value=1.2e-11  Score=91.56  Aligned_cols=33  Identities=24%  Similarity=0.471  Sum_probs=29.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRN   33 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p   33 (149)
                      +|||++.+..|+.++|||||||+++||++|..+
T Consensus       335 ~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~  367 (501)
T PHA03210        335 NSPEILAGDGYCEITDIWSCGLILLDMLSHDFC  367 (501)
T ss_pred             CCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            589999998999999999999999999998643


No 249
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.23  E-value=3.3e-12  Score=89.05  Aligned_cols=87  Identities=16%  Similarity=0.135  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++||||||++++++++|..||.......   .   ..... ..... ...       .......+.+
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~---~---~~~~~-~~~~~-~~~-------~~~~~~~~~~  263 (316)
T cd05574         199 IAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE---T---FSNIL-KKEVT-FPG-------SPPVSSSARD  263 (316)
T ss_pred             cCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH---H---HHHHh-cCCcc-CCC-------ccccCHHHHH
Confidence            57899888889999999999999999999999975332110   0   11111 11110 000       0002345677


Q ss_pred             HHHHhcCCCCCCCCC----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps----~~~vl~~  102 (149)
                      ++.+||+.+|++||+    +.+++.+
T Consensus       264 li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         264 LIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             HHHHHccCCHhHCCCchhhHHHHHcC
Confidence            888999999999999    7777763


No 250
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.23  E-value=3.7e-12  Score=89.20  Aligned_cols=85  Identities=15%  Similarity=0.160  Sum_probs=58.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||.....   ....    .....+...          .+......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~~----~~i~~~~~~----------~p~~~~~~~~~  225 (321)
T cd05591         163 IAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDLF----ESILHDDVL----------YPVWLSKEAVS  225 (321)
T ss_pred             cCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHHH----HHHHcCCCC----------CCCCCCHHHHH
Confidence            689999888999999999999999999999999753321   1111    111111110          00001234667


Q ss_pred             HHHHhcCCCCCCCC-------ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-------CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-------s~~~vl~~  102 (149)
                      ++.+||+.||++|+       ++.+++++
T Consensus       226 ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         226 ILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             HHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            88899999999999       77888764


No 251
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.23  E-value=7.8e-12  Score=84.41  Aligned_cols=86  Identities=21%  Similarity=0.163  Sum_probs=60.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|++|++++++++|+.||......       ........+..+...         ......+.+
T Consensus       168 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~  231 (256)
T cd08530         168 MAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-------DLRYKVQRGKYPPIP---------PIYSQDLQN  231 (256)
T ss_pred             cCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------HHHHHHhcCCCCCCc---------hhhCHHHHH
Confidence            4788888888899999999999999999999997543211       111111222221111         122345778


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.++++.
T Consensus       232 li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         232 FIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHhcC
Confidence            8999999999999999999864


No 252
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.22  E-value=4e-12  Score=87.61  Aligned_cols=99  Identities=10%  Similarity=0.158  Sum_probs=57.8

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh-----------------
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI-----------------   62 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   62 (149)
                      +|||++.+ ..++.++||||+|++++++++|+.||.....  ...........+.. ......                 
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  246 (291)
T cd07844         170 RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTD--VEDQLHKIFRVLGT-PTEETWPGVSSNPEFKPYSFPFY  246 (291)
T ss_pred             CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCcc--HHHHHHHHHHhcCC-CChhhhhhhhhcccccccccccc
Confidence            57898765 4588999999999999999999998753321  11111111111000 000000                 


Q ss_pred             -chhhhcc-ccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           63 -DACIQDL-CNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        63 -~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       ....... ........+.+++.+||+.+|++||++.+++..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         247 PPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             CChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence             0000000 000011456788999999999999999998864


No 253
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.22  E-value=6.9e-12  Score=89.41  Aligned_cols=86  Identities=22%  Similarity=0.188  Sum_probs=62.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      |.||.+.+..|+.|+|+|++||+++|+++.+++|...+   ...++..+....    .    .+     .+..-...+..
T Consensus       173 mcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~---m~~Li~ki~~~~----~----~P-----lp~~ys~el~~  236 (426)
T KOG0589|consen  173 MCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN---MSELILKINRGL----Y----SP-----LPSMYSSELRS  236 (426)
T ss_pred             cCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc---hHHHHHHHhhcc----C----CC-----CCccccHHHHH
Confidence            68999999999999999999999999999999976443   223333322211    1    11     11111234555


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++..|+..+|+.||++.+++..
T Consensus       237 lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  237 LVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHhhcCCccCCCHHHHhhC
Confidence            7789999999999999999974


No 254
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.22  E-value=3.8e-12  Score=89.67  Aligned_cols=101  Identities=16%  Similarity=0.107  Sum_probs=58.4

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHH--------HHhcCC-------Ccchhch
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWK--------LWNKGM-------PSQLIDA   64 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~~~-------~~~~~~~   64 (149)
                      +|||++.. ..++.++|+|+||++++++++|+.||...........+.....        ......       .......
T Consensus       175 ~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (337)
T cd07858         175 RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQ  254 (337)
T ss_pred             cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCccccc
Confidence            57887754 4688999999999999999999999753321110000000000        000000       0000000


Q ss_pred             hhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           65 CIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..... .......+.+++.+||+.+|.+||++.+++++
T Consensus       255 ~~~~~-~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         255 SFARL-FPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             CHHHH-cccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            00000 00122456789999999999999999999986


No 255
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.22  E-value=4.2e-12  Score=89.05  Aligned_cols=97  Identities=14%  Similarity=0.167  Sum_probs=60.0

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcc-hhc--------hhh----
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQ-LID--------ACI----   66 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~----   66 (149)
                      +|||++.+. .++.++|+|++|++++++++|+.||.......   ....+....  +.+.. ...        ...    
T Consensus       173 ~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  247 (330)
T cd07834         173 RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID---QLNLIVEVL--GTPSEEDLKFITSEKARNYLKSLP  247 (330)
T ss_pred             CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH---HHHHHHHhc--CCCChhHhhhccccchhhHHhhcc
Confidence            479998877 78999999999999999999999975432111   111111100  00000 000        000    


Q ss_pred             -hccccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           67 -QDLCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        67 -~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       .....+     .....+.+++.+||+.+|++||++.+++.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         248 KKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             cCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence             000000     012456789999999999999999999985


No 256
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.22  E-value=1.2e-11  Score=86.10  Aligned_cols=37  Identities=16%  Similarity=0.257  Sum_probs=31.4

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCC
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFY   37 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~   37 (149)
                      +|||++.+. .++.++|||++|++++++++|+.||...
T Consensus       182 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         182 RAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            578987664 5789999999999999999999997644


No 257
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.22  E-value=4.1e-12  Score=89.26  Aligned_cols=85  Identities=18%  Similarity=0.099  Sum_probs=58.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||....   ..    .....+..+.+. . .    ..    ....+.+
T Consensus       182 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~---~~----~~~~~i~~~~~~-~-p----~~----~~~~~~~  244 (329)
T PTZ00263        182 LAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT---PF----RIYEKILAGRLK-F-P----NW----FDGRARD  244 (329)
T ss_pred             cCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC---HH----HHHHHHhcCCcC-C-C----CC----CCHHHHH
Confidence            68999998889999999999999999999999974221   11    111112222111 0 0    00    1134567


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~~  102 (149)
                      ++.+||+.||.+|++     +.+++.+
T Consensus       245 li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        245 LVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            888999999999986     6888764


No 258
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.22  E-value=6.3e-12  Score=87.90  Aligned_cols=84  Identities=19%  Similarity=0.190  Sum_probs=56.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||.....   ...    ...+....+ ..         +......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~----~~~i~~~~~-~~---------~~~~~~~~~~  225 (316)
T cd05592         163 IAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DEL----FDSILNDRP-HF---------PRWISKEAKD  225 (316)
T ss_pred             cCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHH----HHHHHcCCC-CC---------CCCCCHHHHH
Confidence            689999888899999999999999999999999753321   111    111111111 00         0111234567


Q ss_pred             HHHHhcCCCCCCCCChH-HHHH
Q 043384           81 IGLLCVQQHPEDRPCMP-SVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~-~vl~  101 (149)
                      ++.+||+.+|.+|+++. +++.
T Consensus       226 ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         226 CLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHHHHccCCHHHcCCChHHHHc
Confidence            88899999999999875 5544


No 259
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.22  E-value=2.5e-11  Score=81.46  Aligned_cols=88  Identities=23%  Similarity=0.340  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|+.||......      ...... ...........       ..-...+.+
T Consensus       164 ~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~-~~~~~~~~~~~-------~~~~~~~~~  229 (253)
T cd05122         164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM------KALFKI-ATNGPPGLRNP-------EKWSDEFKD  229 (253)
T ss_pred             cCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH------HHHHHH-HhcCCCCcCcc-------cccCHHHHH
Confidence            4788888778899999999999999999999987533211      111111 11111111110       000234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..||.+||++.+++++
T Consensus       230 ~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         230 FLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHHHccCChhhCCCHHHHhcC
Confidence            8889999999999999999864


No 260
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.22  E-value=2.7e-11  Score=82.67  Aligned_cols=91  Identities=24%  Similarity=0.394  Sum_probs=57.7

Q ss_pred             CCcccccCCc--cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQ--FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~--~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ++||++....  ++.++|+|++|++++++++|..||.....      ................ .....    ......+
T Consensus       177 ~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~  245 (272)
T cd06629         177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA------IAAMFKLGNKRSAPPI-PPDVS----MNLSPVA  245 (272)
T ss_pred             cCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch------HHHHHHhhccccCCcC-Ccccc----ccCCHHH
Confidence            4688876544  78999999999999999999999642111      1111111111111111 11110    0113456


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+++.+||..+|++||++.+|+++
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         246 LDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHHHHHhcCChhhCCCHHHHhhC
Confidence            778889999999999999999875


No 261
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.22  E-value=9.7e-12  Score=85.81  Aligned_cols=99  Identities=13%  Similarity=0.085  Sum_probs=58.6

Q ss_pred             CCcccccCCc-cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc-----------------CCCcchh
Q 043384            1 MAPEYASDGQ-FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK-----------------GMPSQLI   62 (149)
Q Consensus         1 ~apE~~~~~~-~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~   62 (149)
                      +|||++.+.. ++.++|+||+|++++++++|..||......   .........+..                 .......
T Consensus       173 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (293)
T cd07843         173 RAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI---DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYP  249 (293)
T ss_pred             cCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCchHHHHHhhccchhccccccccc
Confidence            5799886643 689999999999999999999987543221   111111111000                 0000000


Q ss_pred             chhhhccccHH-HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           63 DACIQDLCNFA-EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        63 ~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ........+.. ....+.+++.+||+.+|++||++.+++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         250 YNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             chhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            00000111111 13446778999999999999999999864


No 262
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.22  E-value=5e-12  Score=87.96  Aligned_cols=101  Identities=13%  Similarity=0.072  Sum_probs=59.4

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcC--CC-cc--------hhchhhhc
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKG--MP-SQ--------LIDACIQD   68 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~-~~--------~~~~~~~~   68 (149)
                      +|||++.+ ..++.++|||++|++++++++|+.||.....   ......+.......  .. +.        ...-....
T Consensus       175 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (309)
T cd07845         175 RAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE---IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQP  251 (309)
T ss_pred             cChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCChhhchhhhcccccccccccCCC
Confidence            57898765 4578999999999999999999998753221   11111111110000  00 00        00000000


Q ss_pred             cccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           69 LCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        69 ~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ....     .....+.+++.+||+.||.+||++.+++.+-.
T Consensus       252 ~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~  292 (309)
T cd07845         252 YNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY  292 (309)
T ss_pred             CCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence            0000     01345678999999999999999999997543


No 263
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.21  E-value=2.9e-11  Score=82.93  Aligned_cols=88  Identities=22%  Similarity=0.346  Sum_probs=57.2

Q ss_pred             CCcccccC----CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASD----GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~----~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ++||++.+    ..++.++|+|++|++++++++|+.||.....     ......... .+..+.....        ....
T Consensus       170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~~~~~~~~--------~~~~  235 (283)
T cd06617         170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT-----PFQQLKQVV-EEPSPQLPAE--------KFSP  235 (283)
T ss_pred             cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc-----CHHHHHHHH-hcCCCCCCcc--------ccCH
Confidence            47887754    4468899999999999999999999743211     111111111 1111111100        1123


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+.+++.+||..+|++||++.+++++
T Consensus       236 ~l~~li~~~l~~~p~~Rp~~~~il~~  261 (283)
T cd06617         236 EFQDFVNKCLKKNYKERPNYPELLQH  261 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            46678889999999999999999974


No 264
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.21  E-value=3.2e-12  Score=89.84  Aligned_cols=85  Identities=14%  Similarity=0.139  Sum_probs=58.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||.....   ..    .......... ..         +......+.+
T Consensus       162 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---~~----~~~~~~~~~~-~~---------p~~~~~~~~~  224 (328)
T cd05593         162 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EK----LFELILMEDI-KF---------PRTLSADAKS  224 (328)
T ss_pred             cChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---HH----HHHHhccCCc-cC---------CCCCCHHHHH
Confidence            689999888999999999999999999999999743211   11    1111111111 00         0011234567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||.+|+     ++.+++++
T Consensus       225 li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         225 LLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            88899999999997     88999875


No 265
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.21  E-value=3e-11  Score=82.74  Aligned_cols=98  Identities=14%  Similarity=0.165  Sum_probs=59.0

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhc----------------CCCcchhc
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNK----------------GMPSQLID   63 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~   63 (149)
                      +|||++.+. .++.++|||++|++++++++|+.||....   .......+......                ...+....
T Consensus       165 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (282)
T cd07829         165 RAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDS---EIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPP  241 (282)
T ss_pred             CChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCc
Confidence            578888665 78899999999999999999988864322   11111111111000                00000000


Q ss_pred             hhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           64 ACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        64 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .......+ .....+.+++.+||..+|++||++.+++..
T Consensus       242 ~~~~~~~~-~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         242 KDLEKVLP-RLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             cchHHhcc-cccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            00000000 013457889999999999999999999864


No 266
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.21  E-value=1.4e-11  Score=84.51  Aligned_cols=101  Identities=15%  Similarity=0.129  Sum_probs=57.6

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHH----------HHHHHHhcCCC----cchhchh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIG----------HAWKLWNKGMP----SQLIDAC   65 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~----------~~~~~~~~~~~----~~~~~~~   65 (149)
                      +|||++.+ ..++.++|+|+||++++++++|+.+|.............          |..........    +......
T Consensus       165 ~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         165 RAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             cCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            57898743 457899999999999999999998874332111100000          00000000000    0000000


Q ss_pred             hhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           66 IQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        66 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...... .....+.+++.+||+.+|++||++.+++..
T Consensus       245 ~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         245 LHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             HHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            000000 012457889999999999999999999864


No 267
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.21  E-value=2.8e-11  Score=81.64  Aligned_cols=86  Identities=21%  Similarity=0.265  Sum_probs=59.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|++|++++++++|..||....      . .................         .....+.+
T Consensus       170 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~------~-~~~~~~~~~~~~~~~~~---------~~~~~~~~  233 (258)
T cd08215         170 LSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN------L-LELALKILKGQYPPIPS---------QYSSELRN  233 (258)
T ss_pred             cChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc------H-HHHHHHHhcCCCCCCCC---------CCCHHHHH
Confidence            47888888889999999999999999999999875322      1 11111111222211111         11245667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.++++.
T Consensus       234 ~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         234 LVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHHHcCCChhhCcCHHHHhcC
Confidence            8889999999999999999864


No 268
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.21  E-value=5e-12  Score=88.59  Aligned_cols=84  Identities=19%  Similarity=0.181  Sum_probs=57.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++|||||||+++++++|+.||.....   .....    .+...... .         +......+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~----~i~~~~~~-~---------p~~~s~~~~~  230 (323)
T cd05616         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQ----SIMEHNVA-Y---------PKSMSKEAVA  230 (323)
T ss_pred             cCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHH----HHHhCCCC-C---------CCcCCHHHHH
Confidence            689999999999999999999999999999999753321   11111    11111110 0         0011234567


Q ss_pred             HHHHhcCCCCCCCCCh-----HHHHH
Q 043384           81 IGLLCVQQHPEDRPCM-----PSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~-----~~vl~  101 (149)
                      ++.+||+.+|.+|++.     .++++
T Consensus       231 li~~~l~~~p~~R~~~~~~~~~~i~~  256 (323)
T cd05616         231 ICKGLMTKHPGKRLGCGPEGERDIKE  256 (323)
T ss_pred             HHHHHcccCHHhcCCCCCCCHHHHhc
Confidence            8889999999999985     55554


No 269
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.21  E-value=1.6e-11  Score=95.81  Aligned_cols=85  Identities=15%  Similarity=0.192  Sum_probs=57.4

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||++.+  ..++.++|||||||++|+|++|..||.....     . ......+........          ......+
T Consensus       208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-----~-~qli~~lk~~p~lpi----------~~~S~eL  271 (1021)
T PTZ00266        208 WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-----F-SQLISELKRGPDLPI----------KGKSKEL  271 (1021)
T ss_pred             cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-----H-HHHHHHHhcCCCCCc----------CCCCHHH
Confidence            68998854  4588999999999999999999999753221     1 111111111111000          0012346


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      .+|+..||..+|.+||++.+++.
T Consensus       272 ~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        272 NILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHhcCChhHCcCHHHHhc
Confidence            67888999999999999999984


No 270
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.21  E-value=2.5e-12  Score=90.76  Aligned_cols=103  Identities=15%  Similarity=0.163  Sum_probs=60.6

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchh--------h---h-
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDAC--------I---Q-   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~-   67 (149)
                      +|||++.+ ..++.++||||||++++++++|+.||.....   ........... ....+......        .   . 
T Consensus       181 ~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  256 (342)
T cd07879         181 RAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY---LDQLTQILKVT-GVPGPEFVQKLEDKAAKSYIKSLPK  256 (342)
T ss_pred             cChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhc-CCCCHHHHHHhcccchHHHHhhcCC
Confidence            58998866 4688999999999999999999999753221   11111111100 00000000000        0   0 


Q ss_pred             -ccccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH--hccCC
Q 043384           68 -DLCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM--LGSET  107 (149)
Q Consensus        68 -~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~--l~~~~  107 (149)
                       .....     .....+.+++.+||+.||.+||++.+++.+  ++...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         257 YPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             cccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence             00000     012356789999999999999999999964  44443


No 271
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.21  E-value=7e-12  Score=88.21  Aligned_cols=99  Identities=14%  Similarity=0.175  Sum_probs=59.8

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCc-chhch-------------h
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPS-QLIDA-------------C   65 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~   65 (149)
                      ++||++.+ ..++.++|||++|++++++++|+.||........   ......  ..+.++ .....             .
T Consensus       178 ~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~---~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~  252 (334)
T cd07855         178 RAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ---LKLILS--VLGSPSEEVLNRIGSDRVRKYIQNLP  252 (334)
T ss_pred             cChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH---HHHHHH--HhCCChhHhhhhhchhhHHHHHhhcc
Confidence            47888755 4588999999999999999999999753321111   100000  001110 00000             0


Q ss_pred             hhccccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           66 IQDLCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        66 ~~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .....++     .....+.+++.+||+.+|++||++.+++.+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~  296 (334)
T cd07855         253 RKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF  296 (334)
T ss_pred             cCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence            0000111     11346788999999999999999999998543


No 272
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.21  E-value=2.4e-11  Score=82.74  Aligned_cols=90  Identities=17%  Similarity=0.270  Sum_probs=56.4

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||++.   ...++.++|+||+||+++++++|..||....+...      ..........+...    .....  ....
T Consensus       173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~------~~~~~~~~~~~~~~----~~~~~--~~~~  240 (267)
T cd06645         173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------LFLMTKSNFQPPKL----KDKMK--WSNS  240 (267)
T ss_pred             cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh------HHhhhccCCCCCcc----cccCC--CCHH
Confidence            5789874   45588999999999999999999988643221110      01111111111000    00000  1134


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +.+++.+||+.+|++||++.+|+++
T Consensus       241 ~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         241 FHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhcC
Confidence            6678889999999999999998864


No 273
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.21  E-value=6.7e-12  Score=92.68  Aligned_cols=84  Identities=18%  Similarity=0.175  Sum_probs=60.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++|+|+|||++|||+.|+.||..-   .+..+.+.+.    ...          ..++.-...+.++
T Consensus       535 ~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd---dEee~FdsI~----~d~----------~~yP~~ls~ea~~  597 (694)
T KOG0694|consen  535 LAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD---DEEEVFDSIV----NDE----------VRYPRFLSKEAIA  597 (694)
T ss_pred             cChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC---CHHHHHHHHh----cCC----------CCCCCcccHHHHH
Confidence            7999999999999999999999999999999997532   3333322221    111          1222223356778


Q ss_pred             HHHHhcCCCCCCCCCh-----HHHHH
Q 043384           81 IGLLCVQQHPEDRPCM-----PSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~-----~~vl~  101 (149)
                      ++.+.|.++|++|..+     ++|.+
T Consensus       598 il~~ll~k~p~kRLG~~e~d~~~i~~  623 (694)
T KOG0694|consen  598 IMRRLLRKNPEKRLGSGERDAEDIKK  623 (694)
T ss_pred             HHHHHhccCcccccCCCCCCchhhhh
Confidence            9999999999999865     55555


No 274
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.21  E-value=8.5e-12  Score=86.28  Aligned_cols=88  Identities=18%  Similarity=0.282  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|+||||++++++++|+.||.....   ....    .............     .  ......+.+
T Consensus       185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---~~~~----~~~~~~~~~~~~~-----~--~~~~~~~~~  250 (292)
T cd06658         185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP---LQAM----RRIRDNLPPRVKD-----S--HKVSSVLRG  250 (292)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHH----HHHHhcCCCcccc-----c--cccCHHHHH
Confidence            589998888899999999999999999999999743211   1111    1111111111000     0  011224556


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++..||..||.+||++.++++.
T Consensus       251 li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         251 FLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHccCChhHCcCHHHHhhC
Confidence            7889999999999999999975


No 275
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.21  E-value=9e-12  Score=87.47  Aligned_cols=87  Identities=16%  Similarity=0.192  Sum_probs=60.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.|..+..++|+|+|||++|||++|..||.......  .+.+.+      .........       ......+.+
T Consensus       302 lAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~--Tl~NIv------~~~l~Fp~~-------~~vs~~akD  366 (459)
T KOG0610|consen  302 LAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE--TLRNIV------GQPLKFPEE-------PEVSSAAKD  366 (459)
T ss_pred             ccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh--hHHHHh------cCCCcCCCC-------CcchhHHHH
Confidence            58999999999999999999999999999999976433221  111111      111111100       022345677


Q ss_pred             HHHHhcCCCCCCCCC----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps----~~~vl~~  102 (149)
                      |+++.|.+||.+|..    +.+|.++
T Consensus       367 LIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  367 LIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             HHHHHhccChhhhhccccchHHhhcC
Confidence            889999999999987    7777775


No 276
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.20  E-value=8.1e-12  Score=88.27  Aligned_cols=89  Identities=19%  Similarity=0.120  Sum_probs=58.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+||++++|++|+.||.....      ................ ....  .    ....+.+
T Consensus       197 ~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~~~-p~~~--~----~~~~~~~  263 (350)
T cd05573         197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL------QETYNKIINWKESLRF-PPDP--P----VSPEAID  263 (350)
T ss_pred             cCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH------HHHHHHHhccCCcccC-CCCC--C----CCHHHHH
Confidence            589999988999999999999999999999999753321      1111111110000000 0000  0    1244567


Q ss_pred             HHHHhcCCCCCCCCC-hHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPC-MPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-~~~vl~~l  103 (149)
                      ++.+||. +|.+|++ +.+++++.
T Consensus       264 li~~ll~-dp~~R~~s~~~ll~hp  286 (350)
T cd05573         264 LICRLLC-DPEDRLGSFEEIKSHP  286 (350)
T ss_pred             HHHHHcc-ChhhcCCCHHHHhcCC
Confidence            8889997 9999999 99999853


No 277
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.20  E-value=9.2e-12  Score=84.46  Aligned_cols=86  Identities=19%  Similarity=0.204  Sum_probs=58.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|+||++++++++|..||....      ..... .....+..+..         +......+.+
T Consensus       172 ~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~-~~~~~~~~~~~---------~~~~~~~~~~  235 (260)
T cd08222         172 MSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVV-LRIVEGPTPSL---------PETYSRQLNS  235 (260)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHH-HHHHcCCCCCC---------cchhcHHHHH
Confidence            46888877778889999999999999999999864211      11111 11112211111         1122345677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|++||++.++++.
T Consensus       236 li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         236 IMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             HHHHHhcCChhhCcCHHHHhhC
Confidence            8889999999999999999864


No 278
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.20  E-value=1.8e-11  Score=82.67  Aligned_cols=87  Identities=21%  Similarity=0.337  Sum_probs=57.6

Q ss_pred             CCcccccCCc-cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQ-FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~-~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+.... ++.++|+|+||++++++++|+.||.....      ................         +......+.
T Consensus       168 ~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~~~~~~~~---------~~~~~~~~~  232 (258)
T cd06632         168 MAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG------VAAVFKIGRSKELPPI---------PDHLSDEAK  232 (258)
T ss_pred             eCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH------HHHHHHHHhcccCCCc---------CCCcCHHHH
Confidence            4688876655 88999999999999999999999753321      1111111110111111         011124456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +++.+||..+|++||++.+++..
T Consensus       233 ~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         233 DFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             HHHHHHhhcCcccCcCHHHHhcC
Confidence            78889999999999999999864


No 279
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.20  E-value=1.1e-11  Score=85.50  Aligned_cols=98  Identities=13%  Similarity=0.275  Sum_probs=57.9

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh-----------------
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI-----------------   62 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   62 (149)
                      +|||++.+ ..++.++||||+|++++++++|+.||......  ...........  +.+....                 
T Consensus       170 ~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  245 (291)
T cd07870         170 RPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVL--GVPTEDTWPGVSKLPNYKPEWFLP  245 (291)
T ss_pred             cCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHc--CCCChhhhhhhhhcccccchhccc
Confidence            57998865 45788999999999999999999997533211  11111111000  0000000                 


Q ss_pred             --chhhhc-cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           63 --DACIQD-LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        63 --~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                        ...... .........+.+++.+|++.||.+|||+.+++.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         246 CKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             cCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence              000000 0000112356678899999999999999998853


No 280
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.20  E-value=3.6e-12  Score=89.73  Aligned_cols=98  Identities=11%  Similarity=0.116  Sum_probs=58.4

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhch----h-------hh-
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDA----C-------IQ-   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------~~-   67 (149)
                      ||||++.+ ..++.++||||+|++++++++|+.||......   .....+..... ....+....    .       .. 
T Consensus       176 ~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  251 (336)
T cd07849         176 RAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL---HQLNLILGVLG-TPSQEDLNCIISLRARNYIKSLPF  251 (336)
T ss_pred             cChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcC-CCCHHHHHHhhchhhhhHHhhcCc
Confidence            58998654 56889999999999999999999987532211   11111100000 000000000    0       00 


Q ss_pred             -ccccHH-----HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 -DLCNFA-----EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 -~~~~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       ....+.     ....+.+++.+||+.+|.+||++.+++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         252 KPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             CCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence             000000     12357789999999999999999999986


No 281
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.20  E-value=4.8e-11  Score=84.30  Aligned_cols=99  Identities=10%  Similarity=0.079  Sum_probs=57.0

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCC----------Ccchhc-hhhhc
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGM----------PSQLID-ACIQD   68 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~   68 (149)
                      +|||++.. ..++.++|+||+||+++++++|+.||........   ............          ...... .....
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (342)
T cd07854         185 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ---MQLILESVPVVREEDRNELLNVIPSFVRNDGGEP  261 (342)
T ss_pred             cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCChHHhhhhhhhhhhhhhhccccc
Confidence            47887654 5588899999999999999999999753321110   000000000000          000000 00000


Q ss_pred             cccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           69 LCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        69 ~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.     .....+.+++.+||..||.+||++.+++.+
T Consensus       262 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         262 RRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             CCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            0000     012356789999999999999999999964


No 282
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.20  E-value=1.2e-11  Score=84.17  Aligned_cols=86  Identities=16%  Similarity=0.242  Sum_probs=56.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++|||+||++++++++|+.||.....      .............+         ..+......+.+
T Consensus       176 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~~~~  240 (265)
T cd06652         176 MSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA------MAAIFKIATQPTNP---------VLPPHVSDHCRD  240 (265)
T ss_pred             cChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch------HHHHHHHhcCCCCC---------CCchhhCHHHHH
Confidence            579998888889999999999999999999999753211      11111111011000         111112234556


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||. +|.+||++++|++.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhcC
Confidence            7778884 89999999999864


No 283
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.20  E-value=5.3e-11  Score=81.14  Aligned_cols=92  Identities=20%  Similarity=0.249  Sum_probs=55.0

Q ss_pred             CCccccc-------CCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccH
Q 043384            1 MAPEYAS-------DGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNF   72 (149)
Q Consensus         1 ~apE~~~-------~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (149)
                      +|||++.       ...++.++||||+|++++++++ |..||.....   ...   ........ ......+....    
T Consensus       169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~---~~~~~~~~-~~~~~~~~~~~----  237 (269)
T cd05042         169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---EQV---LKQVVREQ-DIKLPKPQLDL----  237 (269)
T ss_pred             cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---HHH---HHHHhhcc-CccCCCCcccc----
Confidence            4788763       2457789999999999999998 7777643211   111   11111111 11111111111    


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           73 AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        73 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .....+..++..|| .||++||++.+|++.|.
T Consensus       238 ~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         238 KYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             cCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            11233455777888 59999999999998873


No 284
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.20  E-value=2.2e-11  Score=83.45  Aligned_cols=88  Identities=18%  Similarity=0.166  Sum_probs=57.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|+.||..........   .+...... ....         .+......+.+
T Consensus       161 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~~~~~-~~~~---------~~~~~~~~~~~  227 (277)
T cd05577         161 MAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE---ELKRRTLE-MAVE---------YPDKFSPEAKD  227 (277)
T ss_pred             CCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH---HHHhcccc-cccc---------CCccCCHHHHH
Confidence            57999888889999999999999999999999975432211111   11110000 0000         01111345667


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~  101 (149)
                      ++.+||+.+|.+||     ++.+++.
T Consensus       228 li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         228 LCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHHHHccCChhHccCCCcccHHHHHh
Confidence            88899999999999     6666765


No 285
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.20  E-value=5e-12  Score=88.62  Aligned_cols=85  Identities=18%  Similarity=0.119  Sum_probs=58.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+|++++++++|+.||.....   ...    ......+.. .. .        ......+.+
T Consensus       167 ~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~---~~~----~~~~~~~~~-~~-~--------~~~~~~~~~  229 (323)
T cd05584         167 MAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR---KKT----IDKILKGKL-NL-P--------PYLTPEARD  229 (323)
T ss_pred             cChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH---HHH----HHHHHcCCC-CC-C--------CCCCHHHHH
Confidence            689999888899999999999999999999999753221   111    111111111 00 0        011234567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.+|.+|+     ++.+++.+
T Consensus       230 li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         230 LLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             HHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            88899999999999     78888874


No 286
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.19  E-value=2.6e-11  Score=84.15  Aligned_cols=99  Identities=9%  Similarity=0.054  Sum_probs=57.7

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCC---------Ccchhchhhhccc
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGM---------PSQLIDACIQDLC   70 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~   70 (149)
                      +|||++.+. .++.++|||+||++++++++|+.||........   ............         .+...........
T Consensus       193 ~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (311)
T cd07866         193 RPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ---LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNY  269 (311)
T ss_pred             CChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCChhhchhhhhcccccccccCCCC
Confidence            478887653 578999999999999999999998753322111   111111100000         0000000000000


Q ss_pred             --cH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           71 --NF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        71 --~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                        ..     .....+.+++.+||+.||.+||++.+++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         270 PRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             CccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence              00     011457789999999999999999998854


No 287
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.19  E-value=1.2e-11  Score=91.44  Aligned_cols=87  Identities=22%  Similarity=0.177  Sum_probs=62.1

Q ss_pred             CCcccccCCccc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      .+||++.|.+|. .++||||.||+++.+++|+.||+   .+....+..++.++.  -..+..+            ..++.
T Consensus       178 A~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd---DdNir~LLlKV~~G~--f~MPs~I------------s~eaQ  240 (786)
T KOG0588|consen  178 AAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD---DDNIRVLLLKVQRGV--FEMPSNI------------SSEAQ  240 (786)
T ss_pred             CCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC---CccHHHHHHHHHcCc--ccCCCcC------------CHHHH
Confidence            379999999987 89999999999999999999986   222223333322210  0111111            23456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +|+.+++..||.+|-++.||+++..
T Consensus       241 dLLr~ml~VDp~~RiT~~eI~kHP~  265 (786)
T KOG0588|consen  241 DLLRRMLDVDPSTRITTEEILKHPF  265 (786)
T ss_pred             HHHHHHhccCccccccHHHHhhCch
Confidence            7888999999999999999998643


No 288
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.19  E-value=1.9e-11  Score=83.51  Aligned_cols=89  Identities=17%  Similarity=0.149  Sum_probs=58.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+|++++++++|+.||..... .......+... .  ........         .....+.+
T Consensus       173 ~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~-~--~~~~~~~~---------~~~~~~~~  239 (267)
T PHA03390        173 FSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKR-Q--QKKLPFIK---------NVSKNAND  239 (267)
T ss_pred             cChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHh-h--cccCCccc---------ccCHHHHH
Confidence            589999888899999999999999999999999752211 11111111111 1  11101100         12245677


Q ss_pred             HHHHhcCCCCCCCCC-hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-~~~vl~~  102 (149)
                      ++..||+.+|.+|++ +++++++
T Consensus       240 li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        240 FVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             HHHHHhccChhhCCchHHHHhcC
Confidence            888999999999996 6888853


No 289
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.19  E-value=3e-11  Score=87.16  Aligned_cols=87  Identities=14%  Similarity=0.143  Sum_probs=57.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcC-CCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKG-MPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..|...+|+||+||+++||+.|.+||....++..   ...+. .|... ..+.-.          .......
T Consensus       355 iAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T---~rkI~-nwr~~l~fP~~~----------~~s~eA~  420 (550)
T KOG0605|consen  355 IAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQET---YRKIV-NWRETLKFPEEV----------DLSDEAK  420 (550)
T ss_pred             cchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHH-HHhhhccCCCcC----------cccHHHH
Confidence            799999999999999999999999999999999864433221   11111 11111 000000          1114456


Q ss_pred             HHHHHhcCCCCCCCCC---hHHHHHH
Q 043384           80 HIGLLCVQQHPEDRPC---MPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps---~~~vl~~  102 (149)
                      +|+.+|+. ||++|..   +.||.++
T Consensus       421 DLI~rll~-d~~~RLG~~G~~EIK~H  445 (550)
T KOG0605|consen  421 DLITRLLC-DPENRLGSKGAEEIKKH  445 (550)
T ss_pred             HHHHHHhc-CHHHhcCcccHHHHhcC
Confidence            67778888 9999964   6677664


No 290
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.19  E-value=7e-11  Score=81.10  Aligned_cols=97  Identities=11%  Similarity=0.153  Sum_probs=57.4

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchh-------------h
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDAC-------------I   66 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~   66 (149)
                      +|||++.+. .++.++|||++|++++++++|+.+|....   ......+.....  +.+.....+.             .
T Consensus       167 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  241 (286)
T cd07832         167 RAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN---DIEQLAIVFRTL--GTPNEETWPGLTSLPDYNKITFPE  241 (286)
T ss_pred             cCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC---HHHHHHHHHHHc--CCCChHHHhhccCcchhhcccCCC
Confidence            578987654 46899999999999999999977654221   111111111110  0000000000             0


Q ss_pred             hccccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           67 QDLCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        67 ~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ......     .....+.+++.+||..+|.+||++.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         242 SKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             CCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000000     112567789999999999999999999875


No 291
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.18  E-value=1.5e-11  Score=85.44  Aligned_cols=91  Identities=13%  Similarity=-0.015  Sum_probs=58.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||.+.+..++.++|+|+||++++++++|..||....   ..    ........+.....   ...    ......+.+
T Consensus       183 ~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~---~~----~~~~~~~~~~~~~~---~~~----~~~~~~~~~  248 (305)
T cd05609         183 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT---PE----ELFGQVISDDIEWP---EGD----EALPADAQD  248 (305)
T ss_pred             cCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HH----HHHHHHHhcccCCC---Ccc----ccCCHHHHH
Confidence            57898888889999999999999999999999964211   11    11111111111100   000    011234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhcc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGS  105 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~  105 (149)
                      ++.+||+.+|++||++..+.+.|+.
T Consensus       249 li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         249 LISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHhccChhhccCccCHHHHHhC
Confidence            8889999999999997666655554


No 292
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.18  E-value=3.1e-11  Score=81.75  Aligned_cols=87  Identities=21%  Similarity=0.150  Sum_probs=58.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|+.||......    ............ .. ..        +......+.+
T Consensus       166 ~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~~~~-~~-~~--------~~~~~~~~~~  231 (258)
T cd05578         166 MAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT----IRDQIRAKQETA-DV-LY--------PATWSTEAID  231 (258)
T ss_pred             cCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc----HHHHHHHHhccc-cc-cC--------cccCcHHHHH
Confidence            4789888888899999999999999999999997643321    111111111100 00 00        0111255677


Q ss_pred             HHHHhcCCCCCCCCCh--HHHHH
Q 043384           81 IGLLCVQQHPEDRPCM--PSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~--~~vl~  101 (149)
                      ++.+||..+|.+||++  .+++.
T Consensus       232 ~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         232 AINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             HHHHHccCChhHcCCccHHHHhc
Confidence            8899999999999999  66653


No 293
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.18  E-value=6.1e-12  Score=85.70  Aligned_cols=88  Identities=18%  Similarity=0.250  Sum_probs=67.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++....|+.++|+||+|+...||..|++||...++......       +....++..-.+..       =...+-+
T Consensus       196 MAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM-------IPT~PPPTF~KPE~-------WS~~F~D  261 (502)
T KOG0574|consen  196 MAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM-------IPTKPPPTFKKPEE-------WSSEFND  261 (502)
T ss_pred             ccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe-------ccCCCCCCCCChHh-------hhhHHHH
Confidence            799999999999999999999999999999999987777654332       22333332222111       1234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +++.||-++|++|.++.+++++
T Consensus       262 Fi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  262 FIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             HHHHHhcCCHHHHHHHHHHhhh
Confidence            8889999999999999999984


No 294
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.18  E-value=1.2e-11  Score=85.67  Aligned_cols=97  Identities=13%  Similarity=0.084  Sum_probs=58.1

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhc----------------
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLID----------------   63 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   63 (149)
                      ++||++.+ ..++.++|||++||+++++++|+.||.....   ......+.... ....+....                
T Consensus       184 ~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  259 (302)
T cd07864         184 RPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE---LAQLELISRLC-GSPCPAVWPDVIKLPYFNTMKPKKQ  259 (302)
T ss_pred             cChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHh-CCCChhhcccccccccccccccccc
Confidence            47887754 3578899999999999999999988753221   11111111111 011000000                


Q ss_pred             --hhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           64 --ACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        64 --~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                        +....... .....+.+++.+||+.+|.+||++.+++..
T Consensus       260 ~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         260 YRRRLREEFS-FIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             cccchhhhcC-CCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence              00000000 013457789999999999999999999864


No 295
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.18  E-value=2.2e-11  Score=85.27  Aligned_cols=80  Identities=14%  Similarity=0.111  Sum_probs=54.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+||+++++++|+.||....   ....    ...+..... ...         ......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~----~~~i~~~~~-~~~---------~~~~~~~~~  225 (321)
T cd05603         163 LAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---VSQM----YDNILHKPL-QLP---------GGKTVAACD  225 (321)
T ss_pred             CCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC---HHHH----HHHHhcCCC-CCC---------CCCCHHHHH
Confidence            68999988889999999999999999999999975321   1111    111111111 110         011234567


Q ss_pred             HHHHhcCCCCCCCCChH
Q 043384           81 IGLLCVQQHPEDRPCMP   97 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~   97 (149)
                      ++.+||+.+|.+|+++.
T Consensus       226 li~~~l~~~p~~R~~~~  242 (321)
T cd05603         226 LLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHccCCHhhcCCCC
Confidence            88899999999998764


No 296
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.18  E-value=2.5e-11  Score=88.57  Aligned_cols=85  Identities=15%  Similarity=0.196  Sum_probs=61.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||.+.+..|+..+|.||+||++||++.|++||-.      ..+...+.....+...+           +..-...+++
T Consensus       167 mAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a------~si~~Lv~~I~~d~v~~-----------p~~~S~~f~n  229 (808)
T KOG0597|consen  167 MAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA------RSITQLVKSILKDPVKP-----------PSTASSSFVN  229 (808)
T ss_pred             cCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH------HHHHHHHHHHhcCCCCC-----------cccccHHHHH
Confidence            899999999999999999999999999999999621      11222222222221111           0111234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++...|.+||.+|.+..+++++
T Consensus       230 fl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  230 FLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             HHHHHhhcChhhcccHHHHhcC
Confidence            8889999999999999999974


No 297
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.18  E-value=9e-12  Score=87.35  Aligned_cols=85  Identities=19%  Similarity=0.196  Sum_probs=57.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..++.++||||+||+++++++|+.||....   .....    ..+..... ...     .    .....+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~----~~i~~~~~-~~~-----~----~~~~~~~~  230 (324)
T cd05587         168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELF----QSIMEHNV-SYP-----K----SLSKEAVS  230 (324)
T ss_pred             cChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC---HHHHH----HHHHcCCC-CCC-----C----CCCHHHHH
Confidence            68999998889999999999999999999999975322   11111    11111111 000     0    01234567


Q ss_pred             HHHHhcCCCCCCCCCh-----HHHHHH
Q 043384           81 IGLLCVQQHPEDRPCM-----PSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~-----~~vl~~  102 (149)
                      ++.+||..||.+|++.     .+++++
T Consensus       231 li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         231 ICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            8889999999999976     566653


No 298
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18  E-value=5.4e-11  Score=88.21  Aligned_cols=89  Identities=20%  Similarity=0.303  Sum_probs=63.1

Q ss_pred             CCcccc-----cCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYA-----SDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~-----~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ||||++     +...|..++||||||+++.||.-+.+|.....+..       +...+....++.++.+.-.       .
T Consensus       197 MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR-------VllKiaKSePPTLlqPS~W-------s  262 (1187)
T KOG0579|consen  197 MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-------VLLKIAKSEPPTLLQPSHW-------S  262 (1187)
T ss_pred             ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH-------HHHHHhhcCCCcccCcchh-------h
Confidence            788876     56789999999999999999999999853333222       2222334455554443221       2


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ..+.+++.+||.+||+.||++.+++++-
T Consensus       263 ~~F~DfLk~cL~Knp~~Rp~aaqll~Hp  290 (1187)
T KOG0579|consen  263 RSFSDFLKRCLVKNPRNRPPAAQLLKHP  290 (1187)
T ss_pred             hHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence            2456688899999999999999999843


No 299
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.18  E-value=1.6e-11  Score=84.17  Aligned_cols=88  Identities=22%  Similarity=0.310  Sum_probs=56.9

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ++||++.     ...++.++|+|++|+++|++++|+.||......   ..    ...+..+..+....       +....
T Consensus       170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~----~~~~~~~~~~~~~~-------~~~~~  235 (280)
T cd06611         170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RV----LLKILKSEPPTLDQ-------PSKWS  235 (280)
T ss_pred             cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HH----HHHHhcCCCCCcCC-------cccCC
Confidence            4688764     344778999999999999999999997533211   11    11111221111110       00112


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..+.+++.+||+.+|.+||++.++++.
T Consensus       236 ~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         236 SSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            346678889999999999999999875


No 300
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.17  E-value=1.7e-12  Score=91.08  Aligned_cols=85  Identities=14%  Similarity=0.150  Sum_probs=58.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||.....   .    ........... ...         ......+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~----~~~~~i~~~~~-~~p---------~~~~~~~~~  225 (325)
T cd05594         163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---E----KLFELILMEEI-RFP---------RTLSPEAKS  225 (325)
T ss_pred             CCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---H----HHHHHHhcCCC-CCC---------CCCCHHHHH
Confidence            689999888999999999999999999999999753211   1    11111111111 000         011234567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||.+|+     ++.+++++
T Consensus       226 li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         226 LLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             HHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            88899999999996     89999875


No 301
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17  E-value=2e-11  Score=86.99  Aligned_cols=84  Identities=19%  Similarity=0.233  Sum_probs=59.9

Q ss_pred             CCcccccCCc-cc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCC--cchhchhhhccccHHHHH
Q 043384            1 MAPEYASDGQ-FS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMP--SQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~~-~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~   76 (149)
                      +|||++.+.. |. .++||||+||+++.|++|+.||+...       ....+..+..+..  +..+.           ..
T Consensus       188 ~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-------~~~l~~ki~~~~~~~p~~~~-----------S~  249 (370)
T KOG0583|consen  188 AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-------VPNLYRKIRKGEFKIPSYLL-----------SP  249 (370)
T ss_pred             CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-------HHHHHHHHhcCCccCCCCcC-----------CH
Confidence            6899999877 87 89999999999999999999986421       1111111222211  11110           34


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+..|+.+||..||.+|+++.+++..
T Consensus       250 ~~~~Li~~mL~~~P~~R~t~~~i~~h  275 (370)
T KOG0583|consen  250 EARSLIEKMLVPDPSTRITLLEILEH  275 (370)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhhC
Confidence            45668889999999999999999963


No 302
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.17  E-value=6.2e-12  Score=98.47  Aligned_cols=90  Identities=21%  Similarity=0.272  Sum_probs=63.6

Q ss_pred             CCcccccCCc---cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHH-HhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDGQ---FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKL-WNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~~---~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||++.+.+   ...+.||||+||++.||++|+.||..++..       |+... +..+.-+.+.....         .
T Consensus      1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh~Pq~P~~ls---------~ 1468 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGHKPQIPERLS---------S 1468 (1509)
T ss_pred             cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccCCCCCchhhh---------H
Confidence            8999997754   568999999999999999999998654432       22222 22344444433322         2


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      ...+++..||+.||.+|.++.|+++.-...
T Consensus      1469 ~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1469 EGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             hHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence            234567799999999999999999876543


No 303
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.17  E-value=1.4e-11  Score=83.58  Aligned_cols=90  Identities=12%  Similarity=-0.020  Sum_probs=57.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|||++|++++++++|..||.....   ...    ......+....  .....    ......+.+
T Consensus       160 ~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~----~~~~~~~~~~~--~~~~~----~~~~~~~~~  226 (260)
T cd05611         160 LAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAV----FDNILSRRINW--PEEVK----EFCSPEAVD  226 (260)
T ss_pred             cChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHH----HHHHHhcccCC--CCccc----ccCCHHHHH
Confidence            578988887789999999999999999999999753221   111    11111111100  00000    012245677


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+||+.+|++||++.++.+.|
T Consensus       227 ~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         227 LINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHHHccCCHHHccCCCcHHHHH
Confidence            88899999999999876555544


No 304
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.17  E-value=4.9e-11  Score=83.28  Aligned_cols=87  Identities=22%  Similarity=0.307  Sum_probs=57.0

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||++.   ...++.++|||+||++++++++|..||.....      ........ ....+.....    .    ....
T Consensus       184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~------~~~~~~~~-~~~~~~~~~~----~----~~~~  248 (313)
T cd06633         184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIA-QNDSPTLQSN----E----WTDS  248 (313)
T ss_pred             cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHH-hcCCCCCCcc----c----cCHH
Confidence            5789874   45688999999999999999999998643211      11111111 1111111110    0    1134


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +.+++.+||+.+|.+||++.+++..
T Consensus       249 l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         249 FRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcC
Confidence            5678889999999999999999964


No 305
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.17  E-value=1.3e-11  Score=85.24  Aligned_cols=96  Identities=17%  Similarity=0.172  Sum_probs=57.4

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhc----------------
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLID----------------   63 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   63 (149)
                      +|||++.+ ..++.++|+|+||++++++++|..||.....   ......+....  +.+.....                
T Consensus       178 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  252 (295)
T cd07837         178 RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE---LQQLLHIFKLL--GTPTEQVWPGVSKLRDWHEFPQWK  252 (295)
T ss_pred             CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHHHHh--CCCChhhCcchhhccchhhcCccc
Confidence            57898765 4578999999999999999999988753211   11111111110  00000000                


Q ss_pred             -hhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           64 -ACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        64 -~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       ...... .......+.+++.+||..||.+||++.+++.+
T Consensus       253 ~~~~~~~-~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         253 PQDLSRA-VPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             chhHHHh-ccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence             000000 00112356789999999999999999999864


No 306
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.16  E-value=1.5e-11  Score=86.57  Aligned_cols=97  Identities=18%  Similarity=0.182  Sum_probs=57.9

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcc-------------hhchhh
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQ-------------LIDACI   66 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~   66 (149)
                      ++||++.+ ..++.++|+|+||++++++++|+.||........   .......  .+.+..             ......
T Consensus       179 ~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  253 (337)
T cd07852         179 RAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ---LEKIIEV--IGPPSAEDIESIKSPFAATMLDSLP  253 (337)
T ss_pred             cCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHH--hCCCCHHHHHHHHhhhHHHhhhhcc
Confidence            57887754 4578899999999999999999998753321111   1110000  000000             000000


Q ss_pred             -hccccHH-----HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           67 -QDLCNFA-----EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        67 -~~~~~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       .......     ....+.+++.+||+.+|.+||++.++++.
T Consensus       254 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         254 SRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             cccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence             0000000     12457789999999999999999999974


No 307
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.15  E-value=1e-10  Score=79.42  Aligned_cols=88  Identities=17%  Similarity=0.201  Sum_probs=58.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|..||.....+    ................         .+......+.+
T Consensus       159 ~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  225 (262)
T cd05572         159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED----PMEIYNDILKGNGKLE---------FPNYIDKAAKD  225 (262)
T ss_pred             cChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC----HHHHHHHHhccCCCCC---------CCcccCHHHHH
Confidence            5789888888899999999999999999999997533211    1111111110011100         11111345677


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~  101 (149)
                      ++.+||+.+|++|++     +.++++
T Consensus       226 ~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         226 LIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHccCChhhCcCCcccCHHHHhc
Confidence            899999999999999     778776


No 308
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.15  E-value=4.1e-11  Score=84.67  Aligned_cols=85  Identities=16%  Similarity=0.164  Sum_probs=58.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||++++|++|..||.....   .    .....+..+... . ..    .    ....+.+
T Consensus       195 ~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~----~~~~~i~~~~~~-~-p~----~----~~~~~~~  257 (340)
T PTZ00426        195 IAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP---L----LIYQKILEGIIY-F-PK----F----LDNNCKH  257 (340)
T ss_pred             cCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH---H----HHHHHHhcCCCC-C-CC----C----CCHHHHH
Confidence            689999888899999999999999999999999753211   1    111112222110 0 00    0    1133567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||+.||.+|+     ++.+++++
T Consensus       258 li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        258 LMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            88899999999995     89999875


No 309
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.15  E-value=4.6e-12  Score=88.56  Aligned_cols=81  Identities=19%  Similarity=0.185  Sum_probs=54.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++|||+|||+++++++|+.||.....   ....    ........ ..         +......+.+
T Consensus       165 ~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~----~~i~~~~~-~~---------p~~~~~~~~~  227 (318)
T cd05582         165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---KETM----TMILKAKL-GM---------PQFLSPEAQS  227 (318)
T ss_pred             cCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---HHHH----HHHHcCCC-CC---------CCCCCHHHHH
Confidence            589999888899999999999999999999999753221   1111    11111111 00         0011234567


Q ss_pred             HHHHhcCCCCCCCCChHH
Q 043384           81 IGLLCVQQHPEDRPCMPS   98 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~   98 (149)
                      ++.+||+.||.+||++.+
T Consensus       228 li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         228 LLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHhhcCHhHcCCCCC
Confidence            888999999999999544


No 310
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.14  E-value=8.1e-12  Score=88.24  Aligned_cols=97  Identities=19%  Similarity=0.242  Sum_probs=58.1

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcc-hhchhh--------h---
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQ-LIDACI--------Q---   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~---   67 (149)
                      ++||++.+ ..++.++|||++|++++++++|+.||......   ..........  +.+.. ......        .   
T Consensus       182 ~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~---~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  256 (343)
T cd07851         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI---DQLKRIMNLV--GTPDEELLQKISSESARNYIQSLP  256 (343)
T ss_pred             cCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhc--CCCCHHHHhhccchhHHHHHHhcc
Confidence            47887754 36788999999999999999999997532211   1111111100  00000 000000        0   


Q ss_pred             --ccccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 --DLCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 --~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                        ....+     .....+.+++.+||..+|.+||++.+|+++
T Consensus       257 ~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         257 QMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             ccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence              00000     013467889999999999999999999875


No 311
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.14  E-value=2.8e-11  Score=83.68  Aligned_cols=99  Identities=12%  Similarity=0.097  Sum_probs=57.4

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcC---------CCcchhchhhhccc
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKG---------MPSQLIDACIQDLC   70 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~   70 (149)
                      +|||.+.+ ..++.++|+|+|||+++++++|..+|.....   ..............         ..............
T Consensus       169 ~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (298)
T cd07841         169 RAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD---IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPT  245 (298)
T ss_pred             eCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc---HHHHHHHHHHcCCCchhhhhhcccccccccccccCCc
Confidence            46887754 4578999999999999999999776542221   11111111110000         00000000000000


Q ss_pred             c-----HHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           71 N-----FAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        71 ~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +     ......+.+++.+||..+|++||++.+++++
T Consensus       246 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         246 PLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             chhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0     1123467889999999999999999999984


No 312
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.13  E-value=2.1e-11  Score=85.79  Aligned_cols=100  Identities=15%  Similarity=0.173  Sum_probs=60.2

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCc---ch------------hch
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPS---QL------------IDA   64 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------~~~   64 (149)
                      ++||++.+. .++.++|+|++|++++++++|..||.....   ......+..........   ..            ...
T Consensus       200 ~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (335)
T PTZ00024        200 RAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE---IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPK  276 (335)
T ss_pred             CCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcc
Confidence            478988664 478999999999999999999998753322   11111221111100000   00            000


Q ss_pred             hhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           65 CIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ..... .......+.+++.+||..+|++||++.+++.+..
T Consensus       277 ~~~~~-~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~  315 (335)
T PTZ00024        277 DLKTI-FPNASDDAIDLLQSLLKLNPLERISAKEALKHEY  315 (335)
T ss_pred             cHHHh-CcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence            00000 0011245778999999999999999999997544


No 313
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.13  E-value=7.7e-12  Score=87.66  Aligned_cols=84  Identities=14%  Similarity=0.095  Sum_probs=56.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||....   ..    ........... .. .+    .    ....+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~---~~----~~~~~i~~~~~-~~-~~----~----~~~~~~~  225 (323)
T cd05575         163 LAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD---TA----EMYDNILNKPL-RL-KP----N----ISVSARH  225 (323)
T ss_pred             cChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC---HH----HHHHHHHcCCC-CC-CC----C----CCHHHHH
Confidence            68999998899999999999999999999999975321   11    11111111111 00 00    0    1234567


Q ss_pred             HHHHhcCCCCCCCCChH----HHHH
Q 043384           81 IGLLCVQQHPEDRPCMP----SVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~----~vl~  101 (149)
                      ++.+||+.||.+||++.    +++.
T Consensus       226 li~~~l~~~p~~R~~~~~~~~~il~  250 (323)
T cd05575         226 LLEGLLQKDRTKRLGAKDDFLEIKN  250 (323)
T ss_pred             HHHHHhhcCHHhCCCCCCCHHHHHc
Confidence            88899999999999884    5554


No 314
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13  E-value=2.5e-11  Score=85.33  Aligned_cols=90  Identities=21%  Similarity=0.194  Sum_probs=60.3

Q ss_pred             CCcccccCCc---cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDGQ---FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~~---~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||++....   +..+.|+||+||+++.+++|.+||...+..  ..+.+.+.    .+...-.      ...-..-..+
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~eQI~----~G~y~f~------p~~w~~Isee  412 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKEQIL----KGRYAFG------PLQWDRISEE  412 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHHHHh----cCccccc------ChhhhhhhHH
Confidence            5899997654   335889999999999999999998644332  22332222    2222111      0111122345


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .++|+.++|..||+.||++.++|++
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~h  437 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALNH  437 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhcC
Confidence            6778889999999999999999974


No 315
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.13  E-value=5.4e-11  Score=82.17  Aligned_cols=97  Identities=14%  Similarity=0.124  Sum_probs=57.6

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchh-c-------------hh
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI-D-------------AC   65 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~~   65 (149)
                      ++||++.+. .++.++|||++|++++++++|+.||......   ..........  +.+.... .             ..
T Consensus       170 ~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  244 (294)
T PLN00009        170 RAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI---DELFKIFRIL--GTPNEETWPGVTSLPDYKSAFPKW  244 (294)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHh--CCCChhhccccccchhhhhhcccC
Confidence            578887653 5789999999999999999999997532211   1111111000  0000000 0             00


Q ss_pred             hhc---cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           66 IQD---LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        66 ~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...   .........+.+++.+||+.+|++||++.+++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        245 PPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             CCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            000   0000112346778999999999999999999974


No 316
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.12  E-value=1.4e-10  Score=79.82  Aligned_cols=93  Identities=18%  Similarity=0.160  Sum_probs=59.1

Q ss_pred             CCcccccCCc--cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASDGQ--FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~~~--~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ++||++.+..  ++.++|+|+||++++++++|..||.......   ...............          .+......+
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~----------~~~~~~~~l  239 (288)
T cd05583         173 MAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN---SQSEISRRILKSKPP----------FPKTMSAEA  239 (288)
T ss_pred             cCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc---hHHHHHHHHHccCCC----------CCcccCHHH
Confidence            4788876654  7789999999999999999999974321111   111111111111110          001112345


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      .+++.+||+.+|++||++.++.+.|+..
T Consensus       240 ~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         240 RDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             HHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            6788899999999999998887776553


No 317
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.12  E-value=2e-11  Score=86.37  Aligned_cols=99  Identities=14%  Similarity=0.155  Sum_probs=59.1

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhh--------h---c
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACI--------Q---D   68 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~   68 (149)
                      +|||++.+ ..++.++|||++|++++++++|+.||......   .......... ............        .   .
T Consensus       184 ~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  259 (345)
T cd07877         184 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI---DQLKLILRLV-GTPGAELLKKISSESARNYIQSLTQ  259 (345)
T ss_pred             cCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHh-CCCCHHHHhhcccHhHHHHHHHhcc
Confidence            57888765 56888999999999999999999987532211   1111111100 000000000000        0   0


Q ss_pred             --cccH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           69 --LCNF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        69 --~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                        ...+     .....+.+++.+||+.||.+|+++.+++.+-
T Consensus       260 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~  301 (345)
T cd07877         260 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  301 (345)
T ss_pred             cCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence              0000     0123567899999999999999999999754


No 318
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.12  E-value=6.3e-11  Score=81.43  Aligned_cols=89  Identities=16%  Similarity=0.109  Sum_probs=57.9

Q ss_pred             CCccccc-CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYAS-DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~-~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||.+. +..++.++|+|++||+++++++|..||........ ..   ...... .....         .+......+.
T Consensus       162 ~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~---~~~~~~-~~~~~---------~~~~~~~~~~  227 (279)
T cd05633         162 MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HE---IDRMTL-TVNVE---------LPDSFSPELK  227 (279)
T ss_pred             cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HH---HHHHhh-cCCcC---------CccccCHHHH
Confidence            5899876 45688999999999999999999999753322111 11   111100 00000         0111223566


Q ss_pred             HHHHHhcCCCCCCCC-----ChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRP-----CMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rp-----s~~~vl~~l  103 (149)
                      +++.+||..||.+|+     ++.+++++.
T Consensus       228 ~li~~~l~~~p~~R~~~~~~~~~~~~~h~  256 (279)
T cd05633         228 SLLEGLLQRDVSKRLGCLGRGAQEVKEHV  256 (279)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence            788899999999999     599998853


No 319
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.11  E-value=5.2e-11  Score=82.40  Aligned_cols=88  Identities=19%  Similarity=0.300  Sum_probs=57.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|..||.....   ....    ........... .. . .    .....+.+
T Consensus       183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~----~~~~~~~~~~~-~~-~-~----~~~~~l~~  248 (292)
T cd06657         183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAM----KMIRDNLPPKL-KN-L-H----KVSPSLKG  248 (292)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHH----HHHHhhCCccc-CC-c-c----cCCHHHHH
Confidence            578888777889999999999999999999999743211   1111    11111111110 00 0 0    01234566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||..+|.+||++.+++.+
T Consensus       249 li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         249 FLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHhCCcccCcCHHHHhcC
Confidence            7889999999999999999974


No 320
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.11  E-value=4.7e-11  Score=80.19  Aligned_cols=75  Identities=20%  Similarity=0.144  Sum_probs=51.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||+..+..++.++|+|++|++++++++|+.++......            ........         .+......+.+
T Consensus       149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------~~~~~~~~---------~~~~~~~~~~~  207 (237)
T cd05576         149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------INTHTTLN---------IPEWVSEEARS  207 (237)
T ss_pred             cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------cccccccC---------CcccCCHHHHH
Confidence            5899988888899999999999999999998775321100            00000000         00011234667


Q ss_pred             HHHHhcCCCCCCCCCh
Q 043384           81 IGLLCVQQHPEDRPCM   96 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~   96 (149)
                      ++.+||+.||++|+++
T Consensus       208 li~~~l~~dp~~R~~~  223 (237)
T cd05576         208 LLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHccCCHHHhcCC
Confidence            8889999999999997


No 321
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.11  E-value=8e-11  Score=80.77  Aligned_cols=98  Identities=14%  Similarity=0.136  Sum_probs=57.8

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHH-----------hc-----CCCcchhc
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLW-----------NK-----GMPSQLID   63 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~-----------~~-----~~~~~~~~   63 (149)
                      ++||++.+. .++.++|+|++|++++++++|+.||.......   .........           ..     ...+....
T Consensus       167 ~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd07836         167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED---QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPP  243 (284)
T ss_pred             cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhCCCChhhHHHHhcCchhcccccCCCh
Confidence            578887654 46889999999999999999999875332211   111111100           00     00000000


Q ss_pred             hhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           64 ACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        64 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .... .........+.+++.+||+.||.+||++.++++.
T Consensus       244 ~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         244 QDLQ-QLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             HHHH-HHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0000 0000112356789999999999999999999853


No 322
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.10  E-value=1.3e-10  Score=84.29  Aligned_cols=86  Identities=17%  Similarity=0.284  Sum_probs=63.0

Q ss_pred             CcccccCCccc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhc--cccHHHHHHH
Q 043384            2 APEYASDGQFS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQD--LCNFAEVIRC   78 (149)
Q Consensus         2 apE~~~~~~~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~   78 (149)
                      |||.+.|..|. +++||||+||++|.++.|+.||+..+.......                   .++-  ..+..-..+|
T Consensus       186 APEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTm-------------------ImDCKYtvPshvS~eC  246 (864)
T KOG4717|consen  186 APEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTM-------------------IMDCKYTVPSHVSKEC  246 (864)
T ss_pred             CchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhh-------------------hhcccccCchhhhHHH
Confidence            79999999988 899999999999999999999875432221111                   1111  1122234567


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHH--HhccC
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVIL--MLGSE  106 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~--~l~~~  106 (149)
                      .+|+..||..||.+|.+.++|..  ||+..
T Consensus       247 rdLI~sMLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  247 RDLIQSMLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             HHHHHHHHhcCchhhccHHHHhccccccCC
Confidence            88999999999999999999986  45443


No 323
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.10  E-value=6.1e-11  Score=80.32  Aligned_cols=89  Identities=18%  Similarity=0.079  Sum_probs=57.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++....++.++|||++|++++++++|..||.....   .    ........+.....  .    ..  .....+.+
T Consensus       168 ~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~----~~~~~~~~~~~~~~--~----~~--~~~~~~~~  232 (265)
T cd05579         168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---E----EIFQNILNGKIEWP--E----DV--EVSDEAID  232 (265)
T ss_pred             cCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---H----HHHHHHhcCCcCCC--c----cc--cCCHHHHH
Confidence            468888777788999999999999999999999753321   1    11111111111100  0    00  01245667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ++.+||+.+|.+||++..+.+.|+
T Consensus       233 ~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         233 LISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHhcCCHhhcCCCccHHHHhc
Confidence            888999999999999955544443


No 324
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.10  E-value=3.4e-10  Score=79.62  Aligned_cols=103  Identities=16%  Similarity=0.182  Sum_probs=59.1

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHH--------HHHHHhcCCCcchhchhh-hccc
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGH--------AWKLWNKGMPSQLIDACI-QDLC   70 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~   70 (149)
                      ++||++.+ ..++.++|+|++|++++++++|+.||..............        .................. ....
T Consensus       172 ~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (328)
T cd07856         172 RAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPV  251 (328)
T ss_pred             cCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCC
Confidence            57998765 5688999999999999999999998753321111000000        000000000000000000 0000


Q ss_pred             cHH-----HHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           71 NFA-----EVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        71 ~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +..     ....+.+++.+||+.+|++||++.+++..-
T Consensus       252 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~  289 (328)
T cd07856         252 PFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP  289 (328)
T ss_pred             cHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence            000     124577899999999999999999998753


No 325
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.10  E-value=2e-10  Score=76.51  Aligned_cols=88  Identities=23%  Similarity=0.235  Sum_probs=58.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|++|++++++++|..||....  ...    .................       ......+.+
T Consensus       153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~--~~~----~~~~~~~~~~~~~~~~~-------~~~~~~~~~  219 (244)
T smart00220      153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD--QLL----ELFKKIGKPKPPFPPPE-------WKISPEAKD  219 (244)
T ss_pred             CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--cHH----HHHHHHhccCCCCcccc-------ccCCHHHHH
Confidence            47888887888899999999999999999998875321  111    11111111111100000       001245667


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      ++.+||..+|++||++.++++
T Consensus       220 ~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      220 LIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHccCCchhccCHHHHhh
Confidence            888999999999999999986


No 326
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.10  E-value=4.9e-11  Score=83.67  Aligned_cols=83  Identities=16%  Similarity=0.109  Sum_probs=55.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|+.||....   .......    ...... .. .+        .....+.+
T Consensus       163 ~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~----i~~~~~-~~-~~--------~~~~~~~~  225 (325)
T cd05602         163 LAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN---TAEMYDN----ILNKPL-QL-KP--------NITNSARH  225 (325)
T ss_pred             cCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC---HHHHHHH----HHhCCc-CC-CC--------CCCHHHHH
Confidence            68999998899999999999999999999999975321   1111111    111111 00 00        01234556


Q ss_pred             HHHHhcCCCCCCCCChHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVI  100 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl  100 (149)
                      ++.+||+.+|.+|+++.+.+
T Consensus       226 li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         226 LLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHHHHcccCHHHCCCCCCCH
Confidence            78899999999999887433


No 327
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.10  E-value=3.6e-11  Score=82.21  Aligned_cols=85  Identities=14%  Similarity=0.095  Sum_probs=57.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++....++.++|+|++|++++++++|+.||.....   ....   .... ....          ..+......+.+
T Consensus       189 ~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~---~~~~-~~~~----------~~~~~~~~~~~~  251 (280)
T cd05581         189 VSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLTF---QKIL-KLEY----------SFPPNFPPDAKD  251 (280)
T ss_pred             cCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHHH---HHHH-hcCC----------CCCCccCHHHHH
Confidence            478888777788999999999999999999999753321   1111   1111 1000          000011344667


Q ss_pred             HHHHhcCCCCCCCCCh----HHHHHH
Q 043384           81 IGLLCVQQHPEDRPCM----PSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~----~~vl~~  102 (149)
                      ++.+||..+|.+||++    .+++++
T Consensus       252 li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         252 LIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             HHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            8889999999999999    787754


No 328
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.09  E-value=1.3e-11  Score=86.54  Aligned_cols=81  Identities=14%  Similarity=0.107  Sum_probs=54.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||++++|++|+.||....   ..    ............ . .+        .....+.+
T Consensus       163 ~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~---~~----~~~~~~~~~~~~-~-~~--------~~~~~~~~  225 (325)
T cd05604         163 LAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD---VA----EMYDNILHKPLV-L-RP--------GASLTAWS  225 (325)
T ss_pred             CCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC---HH----HHHHHHHcCCcc-C-CC--------CCCHHHHH
Confidence            68999999899999999999999999999999975321   11    111111111110 0 00        11234556


Q ss_pred             HHHHhcCCCCCCCCChHH
Q 043384           81 IGLLCVQQHPEDRPCMPS   98 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~   98 (149)
                      ++.+||+.+|.+||++.+
T Consensus       226 ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         226 ILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHhccCHHhcCCCCC
Confidence            888999999999998853


No 329
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.08  E-value=1.2e-11  Score=86.79  Aligned_cols=88  Identities=16%  Similarity=0.143  Sum_probs=55.7

Q ss_pred             CCccccc------CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHH
Q 043384            1 MAPEYAS------DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAE   74 (149)
Q Consensus         1 ~apE~~~------~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (149)
                      +|||++.      ...++.++||||+||+++++++|+.||.....      ..................       ....
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~~~~~-------~~~~  236 (330)
T cd05601         170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS------AKTYNNIMNFQRFLKFPE-------DPKV  236 (330)
T ss_pred             cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH------HHHHHHHHcCCCccCCCC-------CCCC
Confidence            5889876      45678999999999999999999999753211      111111111111110000       0011


Q ss_pred             HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           75 VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        75 ~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...+.+++..||. +|.+|+++.+++.+
T Consensus       237 ~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         237 SSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             CHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            2345667778997 99999999999974


No 330
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.08  E-value=1.8e-10  Score=82.57  Aligned_cols=90  Identities=16%  Similarity=0.111  Sum_probs=55.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+.++||||+||+++||++|+.||......      ................. .  ...    ...+.+
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~------~~~~~i~~~~~~~~~~~-~--~~~----s~~~~d  281 (381)
T cd05626         215 IAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT------ETQLKVINWENTLHIPP-Q--VKL----SPEAVD  281 (381)
T ss_pred             cCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHH------HHHHHHHccccccCCCC-C--CCC----CHHHHH
Confidence            6899998888999999999999999999999997543211      01111111000000000 0  001    123444


Q ss_pred             HHHH--hcCCCCCCCCChHHHHHHh
Q 043384           81 IGLL--CVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~--cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+  |+..++..|+++.+++.+-
T Consensus       282 li~~ll~~~~~~~~R~~~~~~l~hp  306 (381)
T cd05626         282 LITKLCCSAEERLGRNGADDIKAHP  306 (381)
T ss_pred             HHHHHccCcccccCCCCHHHHhcCc
Confidence            5555  5666777799999999853


No 331
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.08  E-value=8e-10  Score=79.43  Aligned_cols=102  Identities=13%  Similarity=0.142  Sum_probs=65.7

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCC----CcccchHHHHH--H-----HHhcC-----------CCc
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHS----DNKLNLIGHAW--K-----LWNKG-----------MPS   59 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~----~~~~~~~~~~~--~-----~~~~~-----------~~~   59 (149)
                      ||||+.+..|+..+|+|||+|+.+|++||-..|+-...    ..++++...+.  .     ....|           .+.
T Consensus       419 apEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lr  498 (590)
T KOG1290|consen  419 APEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELR  498 (590)
T ss_pred             CcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcccccee
Confidence            79999999999999999999999999999988763322    22232222211  0     01111           110


Q ss_pred             ch-------hchhhhccccH--HHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           60 QL-------IDACIQDLCNF--AEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        60 ~~-------~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      .+       +...+...|.+  +....+.+++.-+|+.+|++||++.+.+++-
T Consensus       499 hI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hP  551 (590)
T KOG1290|consen  499 HIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHP  551 (590)
T ss_pred             cccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCc
Confidence            00       01111112222  2345688999999999999999999999743


No 332
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.08  E-value=5.6e-11  Score=83.34  Aligned_cols=79  Identities=20%  Similarity=0.216  Sum_probs=53.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++|+||+||+++++++|+.||....   .......    +...... .         +......+.+
T Consensus       168 ~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~---~~~~~~~----i~~~~~~-~---------p~~~~~~~~~  230 (323)
T cd05615         168 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED---EDELFQS----IMEHNVS-Y---------PKSLSKEAVS  230 (323)
T ss_pred             cCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC---HHHHHHH----HHhCCCC-C---------CccCCHHHHH
Confidence            68999988889999999999999999999999975322   1111111    1111110 0         0011234567


Q ss_pred             HHHHhcCCCCCCCCCh
Q 043384           81 IGLLCVQQHPEDRPCM   96 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~   96 (149)
                      ++.+||+.+|.+|++.
T Consensus       231 li~~~l~~~p~~R~~~  246 (323)
T cd05615         231 ICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHcccCHhhCCCC
Confidence            8889999999999975


No 333
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.07  E-value=9.7e-11  Score=81.06  Aligned_cols=85  Identities=19%  Similarity=0.178  Sum_probs=56.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..|+..+|+||+|++++||++|.+||...+..   ..    +..+..+..+.. +.        --.....+
T Consensus       192 mAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~---~~----~~~I~~~k~~~~-p~--------~ls~~ard  255 (357)
T KOG0598|consen  192 MAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK---KM----YDKILKGKLPLP-PG--------YLSEEARD  255 (357)
T ss_pred             cChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH---HH----HHHHhcCcCCCC-Cc--------cCCHHHHH
Confidence            8999999999999999999999999999999997533211   11    111222221100 00        00123456


Q ss_pred             HHHHhcCCCCCCCC----ChHHHHH
Q 043384           81 IGLLCVQQHPEDRP----CMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rp----s~~~vl~  101 (149)
                      ++.+.|.+||.+|.    .+.+|..
T Consensus       256 ll~~LL~rdp~~RLg~~~d~~~ik~  280 (357)
T KOG0598|consen  256 LLKKLLKRDPRQRLGGPGDAEEIKR  280 (357)
T ss_pred             HHHHHhccCHHHhcCCCCChHHhhc
Confidence            77799999999995    4444443


No 334
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.07  E-value=1.2e-11  Score=86.91  Aligned_cols=86  Identities=16%  Similarity=0.143  Sum_probs=55.8

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+. .++.++||||+||++++|++|+.||....   .    ......+..+... ...    .    .....+.
T Consensus       163 ~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~---~----~~~~~~i~~~~~~-~~~----~----~~~~~~~  226 (330)
T cd05586         163 LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED---T----QQMYRNIAFGKVR-FPK----N----VLSDEGR  226 (330)
T ss_pred             cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC---H----HHHHHHHHcCCCC-CCC----c----cCCHHHH
Confidence            689988764 48899999999999999999999974321   1    1111112111110 000    0    0123456


Q ss_pred             HHHHHhcCCCCCCCC----ChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRP----CMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rp----s~~~vl~~  102 (149)
                      +++.+||..||.+||    ++.+++++
T Consensus       227 ~li~~~L~~~P~~R~~~~~~~~~ll~h  253 (330)
T cd05586         227 QFVKGLLNRNPQHRLGAHRDAVELKEH  253 (330)
T ss_pred             HHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence            688899999999998    56777763


No 335
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.07  E-value=8.6e-11  Score=82.63  Aligned_cols=97  Identities=15%  Similarity=0.170  Sum_probs=57.7

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcc-hh----chh---------
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQ-LI----DAC---------   65 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~---------   65 (149)
                      +|||++.+ ..++.++|+|++|++++++++|..||.....   ...........  +.+.. ..    ...         
T Consensus       176 ~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  250 (332)
T cd07857         176 RAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY---VDQLNQILQVL--GTPDEETLSRIGSPKAQNYIRSLP  250 (332)
T ss_pred             cCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH---HHHHHHHHHHh--CCCCHHHHHhhhhhhHHHHHHhcc
Confidence            57888765 4688999999999999999999988753221   11111111100  00000 00    000         


Q ss_pred             hhccccHH-----HHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           66 IQDLCNFA-----EVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        66 ~~~~~~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ......+.     ....+.+++.+||+.||.+||++.+++..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         251 NIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             ccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00000000     12457789999999999999999999864


No 336
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.06  E-value=1.1e-10  Score=80.22  Aligned_cols=88  Identities=18%  Similarity=0.132  Sum_probs=57.6

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||++.+ ..++.++|+|++|++++++++|+.||......... ...   ...... ....         +......+.
T Consensus       162 ~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~-~~~---~~~~~~-~~~~---------~~~~s~~~~  227 (278)
T cd05606         162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EID---RMTLTM-AVEL---------PDSFSPELR  227 (278)
T ss_pred             cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH-HHH---HHhhcc-CCCC---------CCcCCHHHH
Confidence            58999864 46889999999999999999999997533221111 111   111000 0000         001124566


Q ss_pred             HHHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      +++.+||..+|.+|+     ++.++++.
T Consensus       228 ~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         228 SLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             HHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            788899999999999     89999864


No 337
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.06  E-value=1e-10  Score=79.64  Aligned_cols=86  Identities=17%  Similarity=0.210  Sum_probs=56.7

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|+||++++++++|+.||....      ..............+.         .+......+.+
T Consensus       176 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~---------~p~~~~~~~~~  240 (264)
T cd06653         176 MSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE------AMAAIFKIATQPTKPM---------LPDGVSDACRD  240 (264)
T ss_pred             cCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC------HHHHHHHHHcCCCCCC---------CCcccCHHHHH
Confidence            57999888888999999999999999999999975321      1111111111111111         11112234667


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||. ++..||++.+++.+
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhcC
Confidence            8889999 47999999988764


No 338
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.06  E-value=3e-10  Score=76.56  Aligned_cols=85  Identities=20%  Similarity=0.292  Sum_probs=57.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++.++|+|++|++++++++|+.||.....      ........ ....... .        ......+.+
T Consensus       166 ~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~------~~~~~~~~-~~~~~~~-~--------~~~~~~~~~  229 (254)
T cd06627         166 MAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP------MAALFRIV-QDDHPPL-P--------EGISPELKD  229 (254)
T ss_pred             cCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH------HHHHHHHh-ccCCCCC-C--------CCCCHHHHH
Confidence            478888777788999999999999999999998753221      11111111 1111111 0        011234567


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      ++.+||..+|++||++.+++.
T Consensus       230 ~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         230 FLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHhCChhhCcCHHHHhc
Confidence            888999999999999999985


No 339
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.05  E-value=1.6e-10  Score=82.28  Aligned_cols=88  Identities=14%  Similarity=0.067  Sum_probs=56.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++++++|..||......   ...   .. .......-......      .....+.+
T Consensus       206 ~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~---~~~---~~-i~~~~~~~~~~~~~------~~s~~~~~  272 (364)
T cd05599         206 IAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQ---ETY---RK-IINWKETLQFPDEV------PLSPEAKD  272 (364)
T ss_pred             cCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHH---HHH---HH-HHcCCCccCCCCCC------CCCHHHHH
Confidence            6899998888999999999999999999999997533211   111   11 11111000000000      01234556


Q ss_pred             HHHHhcCCCCCCCCC---hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC---MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps---~~~vl~~  102 (149)
                      ++.+|+. +|.+|++   +.+++.+
T Consensus       273 li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         273 LIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             HHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            7778886 8999997   8888874


No 340
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.05  E-value=2.7e-10  Score=83.65  Aligned_cols=86  Identities=19%  Similarity=0.278  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||+.- ..|+..+||||||++++||+++..||.....      ...+++.+..|..|..+.+.-     .++   ..+
T Consensus       211 MAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n------~AQIYKKV~SGiKP~sl~kV~-----dPe---vr~  275 (632)
T KOG0584|consen  211 MAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTN------PAQIYKKVTSGIKPAALSKVK-----DPE---VRE  275 (632)
T ss_pred             cChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCC------HHHHHHHHHcCCCHHHhhccC-----CHH---HHH
Confidence            7888775 7899999999999999999999999854322      234455555565554443322     223   334


Q ss_pred             HHHHhcCCCCCCCCChHHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ++.+||.. ..+|+++.++|+.
T Consensus       276 fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  276 FIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHhcC-chhccCHHHHhhC
Confidence            56699999 8999999999974


No 341
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.05  E-value=1.2e-10  Score=90.50  Aligned_cols=92  Identities=15%  Similarity=0.142  Sum_probs=58.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||+++|+++|+.||.......   ..   ... ....+.... +      .......+.+
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k---i~---~~~-~i~~P~~~~-p------~~~iP~~L~~  263 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK---IS---YRD-VILSPIEVA-P------YREIPPFLSQ  263 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh---hh---hhh-hccChhhcc-c------cccCCHHHHH
Confidence            68999998899999999999999999999999975321110   00   000 000000000 0      0011234567


Q ss_pred             HHHHhcCCCCCCCC-ChHHHHHHhccC
Q 043384           81 IGLLCVQQHPEDRP-CMPSVILMLGSE  106 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-s~~~vl~~l~~~  106 (149)
                      ++.+||+.||++|+ ++.++++.|+..
T Consensus       264 LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        264 IAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            88899999999996 566666666543


No 342
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.05  E-value=1.4e-10  Score=77.81  Aligned_cols=92  Identities=22%  Similarity=0.320  Sum_probs=64.1

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ||||.+..  ..|..++||||+|++++|+.+|+.||.-+..     ..+.+... ..+.++.+....-.    ......+
T Consensus       234 mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-----vfeql~~V-v~gdpp~l~~~~~~----~~~s~~~  303 (361)
T KOG1006|consen  234 MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-----VFEQLCQV-VIGDPPILLFDKEC----VHYSFSM  303 (361)
T ss_pred             cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-----HHHHHHHH-HcCCCCeecCcccc----cccCHHH
Confidence            79998843  4599999999999999999999999875432     33333333 34555444332211    1123345


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ..++--|+.+|-.+||+..++++.
T Consensus       304 ~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  304 VRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HHHHHHHhhcccccCcchhhhhcC
Confidence            666678999999999999998864


No 343
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.04  E-value=2.8e-10  Score=75.66  Aligned_cols=88  Identities=15%  Similarity=0.193  Sum_probs=59.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      |+||++....|+..+|||+.||+++-++.|+.||-  +.. ...+++.    +..+.. +...+.....     .....+
T Consensus       179 maPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~--~~~-~~rlye~----I~~g~y-d~~~~~w~~i-----s~~Ak~  245 (355)
T KOG0033|consen  179 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW--DED-QHRLYEQ----IKAGAY-DYPSPEWDTV-----TPEAKS  245 (355)
T ss_pred             cCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC--Ccc-HHHHHHH----Hhcccc-CCCCcccCcC-----CHHHHH
Confidence            79999999999999999999999999999999963  212 1122222    222211 0001111110     123456


Q ss_pred             HHHHhcCCCCCCCCChHHHHH
Q 043384           81 IGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      |+.+||..||.+|-|+.|.++
T Consensus       246 LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  246 LIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             HHHHHhccChhhhccHHHHhC
Confidence            788999999999999999987


No 344
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.04  E-value=4.3e-10  Score=75.70  Aligned_cols=84  Identities=19%  Similarity=0.123  Sum_probs=56.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||...+..++.++|+|+||++++++++|..||.....       ............ .         .+......+.+
T Consensus       160 ~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-------~~~~~~~~~~~~-~---------~~~~~~~~l~~  222 (250)
T cd05123         160 LAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-------KEIYEKILKDPL-R---------FPEFLSPEARD  222 (250)
T ss_pred             cChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-------HHHHHHHhcCCC-C---------CCCCCCHHHHH
Confidence            478888777788999999999999999999999753321       111111111111 0         00111345567


Q ss_pred             HHHHhcCCCCCCCCCh---HHHHH
Q 043384           81 IGLLCVQQHPEDRPCM---PSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~---~~vl~  101 (149)
                      ++.+||..||++||++   .+++.
T Consensus       223 ~i~~~l~~~p~~R~~~~~~~~l~~  246 (250)
T cd05123         223 LISGLLQKDPTKRLGSGGAEEIKA  246 (250)
T ss_pred             HHHHHhcCCHhhCCCcccHHHHHh
Confidence            8889999999999999   56554


No 345
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04  E-value=3.1e-10  Score=81.64  Aligned_cols=101  Identities=17%  Similarity=0.157  Sum_probs=65.7

Q ss_pred             CcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHH-----HHhcCCCcchhchhhhcccc--HH
Q 043384            2 APEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWK-----LWNKGMPSQLIDACIQDLCN--FA   73 (149)
Q Consensus         2 apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~   73 (149)
                      +||.+.| ..|+.++|+||.||++.||+.|++.|+......+.+.+-++..     .|....++..........+.  ..
T Consensus       287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~  366 (560)
T KOG0600|consen  287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR  366 (560)
T ss_pred             ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence            6898887 5799999999999999999999998776655555444444332     12211122110000000111  11


Q ss_pred             H-----HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           74 E-----VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        74 ~-----~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +     ....++|+..+|..||++|.|+.++++.
T Consensus       367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             HHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            1     1357889999999999999999999873


No 346
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.03  E-value=3.7e-10  Score=80.71  Aligned_cols=90  Identities=13%  Similarity=0.117  Sum_probs=57.0

Q ss_pred             CCcccccCC----ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDG----QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~----~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||++.+.    .++.++||||+||+++++++|+.||.....      ................ ...      .....
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~~~~-~~~------~~~s~  276 (370)
T cd05596         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMDHKNSLTF-PDD------IEISK  276 (370)
T ss_pred             ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCCCcCCC-CCc------CCCCH
Confidence            589987643    478999999999999999999999753221      1111111111110000 000      01123


Q ss_pred             HHHHHHHHhcCCCCCC--CCChHHHHHHh
Q 043384           77 RCIHIGLLCVQQHPED--RPCMPSVILML  103 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~--Rps~~~vl~~l  103 (149)
                      .+.+++.+||..+|.+  |+++.+++.+.
T Consensus       277 ~~~~li~~~L~~~p~r~~R~s~~ell~h~  305 (370)
T cd05596         277 QAKDLICAFLTDREVRLGRNGVDEIKSHP  305 (370)
T ss_pred             HHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence            4567888999999987  99999998753


No 347
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02  E-value=3.6e-10  Score=83.23  Aligned_cols=86  Identities=23%  Similarity=0.383  Sum_probs=59.4

Q ss_pred             CCccccc---CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYAS---DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~---~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      |||||+.   .+.|+.++||||+|++..|+.-.++|+  +.    .+.....+... .+..+.+.....        ...
T Consensus       189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl--Fn----MNAMSALYHIA-QNesPtLqs~eW--------S~~  253 (948)
T KOG0577|consen  189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL--FN----MNAMSALYHIA-QNESPTLQSNEW--------SDY  253 (948)
T ss_pred             cchhHheeccccccCCccceeeccchhhhhhhcCCCc--cC----chHHHHHHHHH-hcCCCCCCCchh--------HHH
Confidence            8999985   489999999999999999999999984  22    12223333333 333333322211        123


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      +.+|+-.||++-|.+|||..+++.
T Consensus       254 F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  254 FRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHHHHHhhCcccCCcHHHHhh
Confidence            445666999999999999999887


No 348
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.01  E-value=1.1e-10  Score=83.67  Aligned_cols=36  Identities=28%  Similarity=0.376  Sum_probs=33.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      ||||++.+..|+.++||||+||+++||++|+.||..
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             CCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            689999988999999999999999999999999753


No 349
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.01  E-value=1.8e-10  Score=79.73  Aligned_cols=101  Identities=16%  Similarity=0.089  Sum_probs=64.4

Q ss_pred             CcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHH--------HhcC----CCcchhchhhhc
Q 043384            2 APEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKL--------WNKG----MPSQLIDACIQD   68 (149)
Q Consensus         2 apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~----~~~~~~~~~~~~   68 (149)
                      |||.+.| ..|+.+.||||.||++.||+.|++.|.......+...+..+...        ++..    ..+.+.......
T Consensus       193 aPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~  272 (364)
T KOG0658|consen  193 APELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHK  272 (364)
T ss_pred             CHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCccccccccee
Confidence            7888776 56999999999999999999999987654444443333333211        0000    001111111000


Q ss_pred             cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           69 LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        69 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ........+.++|+.++|+.+|.+|.++.+++.+
T Consensus       273 ~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  273 VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            0111223568899999999999999999999874


No 350
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.00  E-value=5.9e-11  Score=84.82  Aligned_cols=88  Identities=18%  Similarity=0.097  Sum_probs=55.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++.+..++.++||||+||++++|++|+.||......      ...... ......... +.. ..    ....+.+
T Consensus       211 ~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i-~~~~~~~~~-~~~-~~----~s~~~~~  277 (376)
T cd05598         211 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA------ETQLKV-INWETTLHI-PSQ-AK----LSREASD  277 (376)
T ss_pred             cCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH------HHHHHH-hccCccccC-CCC-CC----CCHHHHH
Confidence            6899999889999999999999999999999997533211      111111 111000000 000 00    1123445


Q ss_pred             HHHHhcCCCCCCCC---ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP---CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp---s~~~vl~~  102 (149)
                      ++.+|+ .+|.+|+   ++.+++.+
T Consensus       278 li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         278 LILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             HHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            565655 5999999   89999975


No 351
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.00  E-value=4.2e-10  Score=80.51  Aligned_cols=89  Identities=21%  Similarity=0.275  Sum_probs=52.9

Q ss_pred             CCcccccCC----ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDG----QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~----~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ++||++.-+    +.+.|+||||+||++|.+++|+.||..........-.+-+.+......++..           .-..
T Consensus       647 LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KP-----------vVss  715 (775)
T KOG1151|consen  647 LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKP-----------VVSS  715 (775)
T ss_pred             cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCC-----------ccCH
Confidence            478887543    5789999999999999999999998533222111111111111111111110           1113


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHH
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVI  100 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl  100 (149)
                      ...+++++||+...++|...-++.
T Consensus       716 eAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  716 EAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             HHHHHHHHHHHhhhhhhhhHHHHc
Confidence            455688899999999998544443


No 352
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.00  E-value=7.4e-10  Score=76.43  Aligned_cols=85  Identities=13%  Similarity=0.060  Sum_probs=57.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||.+.+..++.++|+|++|++++++++|+.||....   .    .........+... .. .        .....+.+
T Consensus       165 ~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~----~~~~~~~~~~~~~-~~-~--------~~~~~l~~  227 (290)
T cd05580         165 LAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN---P----IQIYEKILEGKVR-FP-S--------FFSPDAKD  227 (290)
T ss_pred             cChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC---H----HHHHHHHhcCCcc-CC-c--------cCCHHHHH
Confidence            57998888788899999999999999999999975322   1    1111111111110 00 0        01234567


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      ++.+||..+|.+|+     ++.+++++
T Consensus       228 li~~~l~~~p~~R~~~~~~~~~~l~~~  254 (290)
T cd05580         228 LIRNLLQVDLTKRLGNLKNGVNDIKNH  254 (290)
T ss_pred             HHHHHccCCHHHccCcccCCHHHHHcC
Confidence            88899999999998     77777754


No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.98  E-value=1.4e-09  Score=76.98  Aligned_cols=96  Identities=16%  Similarity=0.203  Sum_probs=57.2

Q ss_pred             CCcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHh-cCCCcchhchhh---------h--
Q 043384            1 MAPEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWN-KGMPSQLIDACI---------Q--   67 (149)
Q Consensus         1 ~apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~--   67 (149)
                      ++||++.+ ..++.++|+|++|++++++++|+.||......      ........ ....+.......         .  
T Consensus       182 ~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (343)
T cd07880         182 RAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL------DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKL  255 (343)
T ss_pred             cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhc
Confidence            47888765 45889999999999999999999997532211      01111000 000000000000         0  


Q ss_pred             -ccc--cH-----HHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 -DLC--NF-----AEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 -~~~--~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                       ...  ..     .....+.+++.+|++.||.+||++.+++.+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         256 PRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             cccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence             000  00     112346789999999999999999999964


No 354
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.97  E-value=1.2e-09  Score=74.40  Aligned_cols=94  Identities=16%  Similarity=0.181  Sum_probs=64.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH-HHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI-RCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   79 (149)
                      .|||++-..+|...+|+||+||++|-++.|.+||=   ..+...+..-+...+..+.. +..      ...|.+.. ...
T Consensus       230 vaPevlg~eKydkscdmwSlgVimYIlLCGyPPFY---S~hg~aispgMk~rI~~gqy-~FP------~pEWs~VSe~aK  299 (400)
T KOG0604|consen  230 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY---SNHGLAISPGMKRRIRTGQY-EFP------EPEWSCVSEAAK  299 (400)
T ss_pred             cCHHHhCchhcCCCCCccchhHHHHHhhcCCCccc---ccCCccCChhHHhHhhccCc-cCC------ChhHhHHHHHHH
Confidence            47999988899999999999999999999999962   22222222222222222221 111      11234443 456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ++++..|..+|.+|.++.+++.+-.
T Consensus       300 dlIR~LLkt~PteRlTI~~~m~hpw  324 (400)
T KOG0604|consen  300 DLIRKLLKTEPTERLTIEEVMDHPW  324 (400)
T ss_pred             HHHHHHhcCCchhheeHHHhhcCch
Confidence            7888899999999999999997433


No 355
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.97  E-value=9.2e-10  Score=77.38  Aligned_cols=37  Identities=32%  Similarity=0.517  Sum_probs=35.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFY   37 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~   37 (149)
                      ||||++...+|+.|+|+||+|+++|++++|+.||+..
T Consensus       181 MAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  181 MAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             cCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence            8999999999999999999999999999999998744


No 356
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.95  E-value=4.8e-10  Score=75.04  Aligned_cols=96  Identities=15%  Similarity=0.213  Sum_probs=60.4

Q ss_pred             CcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhcccc---------
Q 043384            2 APEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCN---------   71 (149)
Q Consensus         2 apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------   71 (149)
                      |||.+-|. .|....|+||.||++.|++.|.+-|.   +..+......+...+  |.+..-..+....+.+         
T Consensus       169 APELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp---G~sDidQL~~If~~L--GTP~~~~WP~~~~lpdY~~~~~~P~  243 (318)
T KOG0659|consen  169 APELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP---GDSDIDQLSKIFRAL--GTPTPDQWPEMTSLPDYVKIQQFPK  243 (318)
T ss_pred             ChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC---CCchHHHHHHHHHHc--CCCCcccCccccccccHHHHhcCCC
Confidence            68887774 69999999999999999998876543   223332333332221  1111111111111111         


Q ss_pred             -------HHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           72 -------FAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        72 -------~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                             .......++|+..+|..||.+|.++.|.+++
T Consensus       244 ~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  244 PPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             CccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence                   1122457899999999999999999999875


No 357
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=98.95  E-value=2.1e-10  Score=82.06  Aligned_cols=88  Identities=15%  Similarity=0.114  Sum_probs=55.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCC-CcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGM-PSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ||||++.+..|+.++||||+||+++|+++|..||.....   ...    ........ ......    .   ......+.
T Consensus       215 ~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---~~~----~~~i~~~~~~~~~p~----~---~~~s~~~~  280 (377)
T cd05629         215 IAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENS---HET----YRKIINWRETLYFPD----D---IHLSVEAE  280 (377)
T ss_pred             cCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCH---HHH----HHHHHccCCccCCCC----C---CCCCHHHH
Confidence            689999888899999999999999999999999753221   111    11111110 000000    0   00113455


Q ss_pred             HHHHHhcCCCCCCC---CChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDR---PCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~R---ps~~~vl~~l  103 (149)
                      +++.+|+. +|.+|   +++.+++.+.
T Consensus       281 dli~~lL~-~~~~r~~r~~~~~~l~hp  306 (377)
T cd05629         281 DLIRRLIT-NAENRLGRGGAHEIKSHP  306 (377)
T ss_pred             HHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence            67778887 66665   5999998853


No 358
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.94  E-value=3.9e-10  Score=76.11  Aligned_cols=91  Identities=18%  Similarity=0.214  Sum_probs=60.8

Q ss_pred             CCcccccCCc---cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDGQ---FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~~---~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      |+||.+....   .-.++|+|||++++||+.+...||....+....      .+...++....+.         ......
T Consensus       353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg------mkialeglrv~ip---------pgis~h  417 (448)
T KOG0195|consen  353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG------MKIALEGLRVHIP---------PGISRH  417 (448)
T ss_pred             CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh------hhhhhccccccCC---------CCccHH
Confidence            6788776543   337899999999999999999998655443221      1111122222111         112233


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHhccC
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILMLGSE  106 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l~~~  106 (149)
                      +.+|+.-|+..||.+||.++.|+-.|++.
T Consensus       418 m~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  418 MNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            45577789999999999999999888764


No 359
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.93  E-value=2.1e-09  Score=77.18  Aligned_cols=92  Identities=17%  Similarity=0.111  Sum_probs=61.7

Q ss_pred             CCcccccCCc----cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDGQ----FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~~----~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||.+.++.    -+.+.|||++||++|.++.|+.||-.   +    .....+..+.+..+.-...        .+...
T Consensus       282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~---~----~~~~l~~KIvn~pL~fP~~--------pe~~e  346 (576)
T KOG0585|consen  282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD---D----FELELFDKIVNDPLEFPEN--------PEINE  346 (576)
T ss_pred             cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc---c----hHHHHHHHHhcCcccCCCc--------ccccH
Confidence            7999987733    33889999999999999999999632   1    1122222222222110000        01234


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      .+.+|++++|.+||++|.+..+|..+.....
T Consensus       347 ~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  347 DLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             HHHHHHHHHhhcChhheeehhhheecceecc
Confidence            5667888999999999999999998776554


No 360
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.91  E-value=1.5e-09  Score=77.29  Aligned_cols=36  Identities=25%  Similarity=0.360  Sum_probs=33.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      ||||++.+..++.++||||+||+++||++|+.||..
T Consensus       203 ~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             cCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            689999888999999999999999999999999753


No 361
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.91  E-value=3.2e-09  Score=73.34  Aligned_cols=96  Identities=19%  Similarity=0.239  Sum_probs=62.2

Q ss_pred             CcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccc----------
Q 043384            2 APEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLC----------   70 (149)
Q Consensus         2 apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------   70 (149)
                      |||.+.+. .|++..|+||+||++.|++.+++.|...   .+...++.+...+  |-+.+...++...+.          
T Consensus       245 aPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~---sE~dQl~~If~ll--GtPte~iwpg~~~lp~~k~~~f~~~  319 (419)
T KOG0663|consen  245 APELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK---SEIDQLDKIFKLL--GTPSEAIWPGYSELPAVKKMTFSEH  319 (419)
T ss_pred             CHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC---chHHHHHHHHHHh--CCCccccCCCccccchhhccccCCC
Confidence            68888875 5999999999999999999999876543   3333334433322  222222222211110          


Q ss_pred             cH-------HH---HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           71 NF-------AE---VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        71 ~~-------~~---~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +.       ..   .....+|+...|..||.+|.|+++.+++
T Consensus       320 pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  320 PYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             CchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence            00       00   1245678889999999999999999875


No 362
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.90  E-value=2.3e-09  Score=73.90  Aligned_cols=89  Identities=18%  Similarity=0.143  Sum_probs=54.8

Q ss_pred             CCcccccC--CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHH
Q 043384            1 MAPEYASD--GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRC   78 (149)
Q Consensus         1 ~apE~~~~--~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (149)
                      ++||++..  ..++.++|||+||++++++++|..||......  ...... .........+          .+......+
T Consensus       173 ~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~-~~~~~~~~~~----------~~~~~~~~~  239 (290)
T cd05613         173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEI-SRRILKSEPP----------YPQEMSALA  239 (290)
T ss_pred             CChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHH-HHHhhccCCC----------CCccCCHHH
Confidence            57888764  34678999999999999999999997532111  111111 1111111110          001112345


Q ss_pred             HHHHHHhcCCCCCCCC-----ChHHHHHH
Q 043384           79 IHIGLLCVQQHPEDRP-----CMPSVILM  102 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rp-----s~~~vl~~  102 (149)
                      .+++.+||+.+|++|+     ++.+++.+
T Consensus       240 ~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         240 KDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            6788899999999997     66777653


No 363
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.89  E-value=1.3e-09  Score=78.01  Aligned_cols=90  Identities=17%  Similarity=0.101  Sum_probs=62.0

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++.+..|+..+|+||.|++++.|+.|..||.......   ...    .+..+.+ ....+....     -...+.+
T Consensus       205 ~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~---~~~----~i~~~~~-~f~~~~w~~-----is~~akd  271 (382)
T KOG0032|consen  205 VAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE---IFL----AILRGDF-DFTSEPWDD-----ISESAKD  271 (382)
T ss_pred             cCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH---HHH----HHHcCCC-CCCCCCccc-----cCHHHHH
Confidence            68999999999999999999999999999999975332111   111    1222222 111111111     1234566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++..++..||.+|+++.+++++.
T Consensus       272 ~i~~ll~~dp~~R~ta~~~L~Hp  294 (382)
T KOG0032|consen  272 FIRKLLEFDPRKRLTAAQALQHP  294 (382)
T ss_pred             HHHHhcccCcccCCCHHHHhcCc
Confidence            88899999999999999999853


No 364
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.89  E-value=9.2e-10  Score=78.30  Aligned_cols=36  Identities=25%  Similarity=0.360  Sum_probs=33.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGF   36 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~   36 (149)
                      ||||++.+..++.++||||+||+++||++|+.||..
T Consensus       203 ~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         203 IAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence            689999988999999999999999999999999753


No 365
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.87  E-value=5.8e-09  Score=78.36  Aligned_cols=26  Identities=4%  Similarity=-0.115  Sum_probs=22.9

Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ..+|+.+||+.||.+||++.+++++-
T Consensus       426 ~~dLi~~mL~~dP~kR~ta~e~L~Hp  451 (566)
T PLN03225        426 GWELLKSMMRFKGRQRISAKAALAHP  451 (566)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhCCc
Confidence            44789999999999999999999853


No 366
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.87  E-value=4e-09  Score=75.47  Aligned_cols=91  Identities=16%  Similarity=0.150  Sum_probs=53.2

Q ss_pred             CCcccccCC----ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDG----QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~----~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||++.+.    .++.++||||+||++++|++|+.||.....      ...................   .    ....
T Consensus       210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~---~----~~s~  276 (371)
T cd05622         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMNHKNSLTFPDD---N----DISK  276 (371)
T ss_pred             cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCcccCCCc---C----CCCH
Confidence            689988653    388999999999999999999999753211      1111111111111111000   0    0122


Q ss_pred             HHHHHHHHhcCCCCCC--CCChHHHHHHhc
Q 043384           77 RCIHIGLLCVQQHPED--RPCMPSVILMLG  104 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~--Rps~~~vl~~l~  104 (149)
                      .+.+++..|+..++.+  |+++.+++++..
T Consensus       277 ~~~~li~~~L~~~~~r~~r~~~~ei~~h~~  306 (371)
T cd05622         277 EAKNLICAFLTDREVRLGRNGVEEIKRHLF  306 (371)
T ss_pred             HHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence            3455677888743332  779999998643


No 367
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.87  E-value=3.8e-09  Score=74.39  Aligned_cols=35  Identities=26%  Similarity=0.502  Sum_probs=30.3

Q ss_pred             CCcccccC-----CccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYASD-----GQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~~~-----~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      ||||++..     ..++.++||||+||+++++++|+.||.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~  209 (331)
T cd05597         170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence            68998863     457889999999999999999999974


No 368
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.86  E-value=1.5e-09  Score=76.36  Aligned_cols=35  Identities=26%  Similarity=0.509  Sum_probs=30.6

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      ||||++.     ...++.++|||||||+++|+++|+.||.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~  209 (332)
T cd05623         170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY  209 (332)
T ss_pred             cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence            6899885     3468899999999999999999999975


No 369
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.85  E-value=2.7e-09  Score=75.86  Aligned_cols=79  Identities=20%  Similarity=0.225  Sum_probs=54.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||.+.+..|...+|+|+|||+++||+.|+.||+..+   +..+...+..  .+..            ++-.-.....+
T Consensus       517 iAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD---E~elF~aI~e--hnvs------------yPKslSkEAv~  579 (683)
T KOG0696|consen  517 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQAIME--HNVS------------YPKSLSKEAVA  579 (683)
T ss_pred             cccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHH--ccCc------------CcccccHHHHH
Confidence            69999999999999999999999999999999986443   2222222111  0111            11112234566


Q ss_pred             HHHHhcCCCCCCCCCh
Q 043384           81 IGLLCVQQHPEDRPCM   96 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~   96 (149)
                      +....|.+.|.+|..+
T Consensus       580 ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  580 ICKGLLTKHPGKRLGC  595 (683)
T ss_pred             HHHHHhhcCCccccCC
Confidence            7778889999999644


No 370
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=98.84  E-value=5.4e-09  Score=74.76  Aligned_cols=90  Identities=13%  Similarity=0.132  Sum_probs=53.0

Q ss_pred             CCcccccCC----ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHH
Q 043384            1 MAPEYASDG----QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~~~~----~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||++.+.    .++.++|+||+||++++|++|+.||.....      .................. .      ..-..
T Consensus       210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~~~~~i~~~~~~~~~p~-~------~~~s~  276 (370)
T cd05621         210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VGTYSKIMDHKNSLNFPE-D------VEISK  276 (370)
T ss_pred             CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCcccCCCC-c------ccCCH
Confidence            689988653    378999999999999999999999753211      111111111111100000 0      00112


Q ss_pred             HHHHHHHHhcCCCCC--CCCChHHHHHHh
Q 043384           77 RCIHIGLLCVQQHPE--DRPCMPSVILML  103 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~--~Rps~~~vl~~l  103 (149)
                      .+.+++..|+..++.  .|+++.+++++-
T Consensus       277 ~~~~li~~~L~~~~~r~~R~~~~e~l~hp  305 (370)
T cd05621         277 HAKNLICAFLTDREVRLGRNGVEEIKQHP  305 (370)
T ss_pred             HHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence            344566678875443  388999999863


No 371
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.84  E-value=9.2e-10  Score=78.64  Aligned_cols=84  Identities=19%  Similarity=0.145  Sum_probs=56.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ||||++....|+...|+|++||++|||+.|+.||.........   +.+.+...+          ....++..+...+..
T Consensus       353 MAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~---eEvdrr~~~----------~~~ey~~kFS~eaks  419 (591)
T KOG0986|consen  353 MAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR---EEVDRRTLE----------DPEEYSDKFSEEAKS  419 (591)
T ss_pred             cCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH---HHHHHHHhc----------chhhcccccCHHHHH
Confidence            8999999999999999999999999999999997533211110   011111100          001122233455667


Q ss_pred             HHHHhcCCCCCCCCChH
Q 043384           81 IGLLCVQQHPEDRPCMP   97 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~   97 (149)
                      ++...|++||.+|..+.
T Consensus       420 lc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  420 LCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHHHHccCHHHhccCC
Confidence            88899999999996543


No 372
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.84  E-value=3.3e-09  Score=75.55  Aligned_cols=103  Identities=17%  Similarity=0.149  Sum_probs=68.4

Q ss_pred             CCcccccCC----ccc--cCCcchhhhHhHHHHHhcc----------cCCCCCCCCcccchHHHHHHHHhcCCCcchhch
Q 043384            1 MAPEYASDG----QFS--VKSDVFSFGVLLLEIVSGK----------RNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDA   64 (149)
Q Consensus         1 ~apE~~~~~----~~~--~~~dv~s~g~~l~e~~~~~----------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (149)
                      ||||++...    .|.  ..+|||+||.++||+..+.          .||  ++-...+.-.+.+.+.+.........+.
T Consensus       387 MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Py--yd~Vp~DPs~eeMrkVVCv~~~RP~ipn  464 (513)
T KOG2052|consen  387 MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPY--YDVVPSDPSFEEMRKVVCVQKLRPNIPN  464 (513)
T ss_pred             cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCc--ccCCCCCCCHHHHhcceeecccCCCCCc
Confidence            899998653    122  6789999999999987632          242  3333444444444444433333222222


Q ss_pred             hhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccCCc
Q 043384           65 CIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSETV  108 (149)
Q Consensus        65 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~  108 (149)
                      .   ....+.+..+.++|+.||..+|..|.++-.+.+.|.++.+
T Consensus       465 r---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  465 R---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             c---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            2   1224566778899999999999999999999998887664


No 373
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=98.82  E-value=3.9e-09  Score=71.76  Aligned_cols=76  Identities=16%  Similarity=0.138  Sum_probs=51.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++....|+.++|+|+|||+++||+.|.+||-...+   .    .++..+..+.+.          .+.-....+.+
T Consensus       208 LAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---~----~iY~KI~~~~v~----------fP~~fs~~~kd  270 (355)
T KOG0616|consen  208 LAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---I----QIYEKILEGKVK----------FPSYFSSDAKD  270 (355)
T ss_pred             cChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---H----HHHHHHHhCccc----------CCcccCHHHHH
Confidence            689999999999999999999999999999999743222   2    222222222210          11111234455


Q ss_pred             HHHHhcCCCCCCC
Q 043384           81 IGLLCVQQHPEDR   93 (149)
Q Consensus        81 l~~~cl~~~p~~R   93 (149)
                      |+...|+.|-.+|
T Consensus       271 Ll~~LL~vD~t~R  283 (355)
T KOG0616|consen  271 LLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHhhhhHhh
Confidence            6778888887777


No 374
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.79  E-value=1.1e-09  Score=79.62  Aligned_cols=98  Identities=17%  Similarity=0.097  Sum_probs=65.4

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhh---------------
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACI---------------   66 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------   66 (149)
                      |||.+.|..|....|+||+||++||+.+|+..|......+.+-+.....    ...+..++..+.               
T Consensus       603 aPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K----Gk~p~KmlRKgqF~dqHFD~d~nf~~~  678 (752)
T KOG0670|consen  603 APEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK----GKFPNKMLRKGQFKDQHFDQDLNFLYI  678 (752)
T ss_pred             CcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc----CCCcHHHhhhcchhhhhcccccceEEE
Confidence            7999999999999999999999999999999887554444333322221    111111111110               


Q ss_pred             ---------------------------hc--cccHH---HHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           67 ---------------------------QD--LCNFA---EVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        67 ---------------------------~~--~~~~~---~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                                                 ..  .++..   .+..+.+|+-.|+..||.+|.+..+.|++.
T Consensus       679 e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~Hp  747 (752)
T KOG0670|consen  679 EVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHP  747 (752)
T ss_pred             eccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCC
Confidence                                       00  01111   223577899999999999999999988653


No 375
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.78  E-value=7.6e-09  Score=72.86  Aligned_cols=35  Identities=26%  Similarity=0.502  Sum_probs=30.8

Q ss_pred             CCcccccC-----CccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYASD-----GQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~~~-----~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      ||||++.+     ..++.++||||+|++++++++|+.||.
T Consensus       170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~  209 (331)
T cd05624         170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence            68998865     568899999999999999999999974


No 376
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.76  E-value=3.8e-09  Score=72.89  Aligned_cols=96  Identities=16%  Similarity=0.199  Sum_probs=61.2

Q ss_pred             CcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhh-------------
Q 043384            2 APEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQ-------------   67 (149)
Q Consensus         2 apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   67 (149)
                      |||++.+. .|+...|+||+||++.||++++..|....   +......+...+  +.+.+...+...             
T Consensus       188 aPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s---e~~ql~~If~~l--GtP~e~~Wp~v~~~~~~k~~f~~~~  262 (323)
T KOG0594|consen  188 APEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS---EIDQLFRIFRLL--GTPNEKDWPGVSSLPDYKAPFPKWP  262 (323)
T ss_pred             CHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc---HHHHHHHHHHHc--CCCCccCCCCccccccccccCcCCC
Confidence            79998886 79999999999999999999888765332   222222222221  111111111110             


Q ss_pred             ccccHHH--H---HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 DLCNFAE--V---IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 ~~~~~~~--~---~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      ...+...  .   ....+++..||+.+|.+|.++...+.+
T Consensus       263 ~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  263 GPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            0011111  0   257889999999999999999999875


No 377
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.75  E-value=1.1e-08  Score=80.39  Aligned_cols=86  Identities=21%  Similarity=0.242  Sum_probs=54.5

Q ss_pred             CCcccccCC---ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASDG---QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~~---~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      +|||.+.+.   +|+.|+|+||+||+++||+..   |...  +.   -+ .+...+..+..+..     + .........
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP---F~Ts--ME---Ra-~iL~~LR~g~iP~~-----~-~f~~~~~~~  846 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP---FGTS--ME---RA-SILTNLRKGSIPEP-----A-DFFDPEHPE  846 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhcc---CCch--HH---HH-HHHHhcccCCCCCC-----c-ccccccchH
Confidence            589998664   599999999999999999743   3211  11   11 11112223333222     1 111222334


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      -..++.++++.||.+|||+.|+|.
T Consensus       847 e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  847 EASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhh
Confidence            456788999999999999999996


No 378
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.72  E-value=1e-08  Score=67.84  Aligned_cols=86  Identities=16%  Similarity=0.086  Sum_probs=60.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      ++||++.+..++..+|+|++|++.+|++.|.+||+...   ....    ++.+..-..          ..+..-...+.+
T Consensus       189 l~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~et----YkrI~k~~~----------~~p~~is~~a~d  251 (281)
T KOG0580|consen  189 LPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSET----YKRIRKVDL----------KFPSTISGGAAD  251 (281)
T ss_pred             CCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHH----HHHHHHccc----------cCCcccChhHHH
Confidence            47999999999999999999999999999999986432   2222    222211111          000011134566


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHh
Q 043384           81 IGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ++.+|+..+|.+|....+++.+-
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~hp  274 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMDHP  274 (281)
T ss_pred             HHHHHhccCccccccHHHHhhhH
Confidence            88899999999999999998753


No 379
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.72  E-value=2.1e-08  Score=69.18  Aligned_cols=93  Identities=18%  Similarity=0.285  Sum_probs=58.4

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhch-----hhhccc
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDA-----CIQDLC   70 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~   70 (149)
                      ||||++-     ...|..++|.||+||++|-|++|..||...=...    ..     |..|.+.+....     ..+..+
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d----CG-----WdrGe~Cr~CQ~~LFesIQEGkY  323 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD----CG-----WDRGEVCRVCQNKLFESIQEGKY  323 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc----CC-----ccCCCccHHHHHHHHHHHhccCC
Confidence            8999863     2569999999999999999999999975321111    01     122222221111     111122


Q ss_pred             cHHH------HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           71 NFAE------VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        71 ~~~~------~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+++      .....++....+.+|+.+|.++.+++.+
T Consensus       324 eFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh  361 (463)
T KOG0607|consen  324 EFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH  361 (463)
T ss_pred             cCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence            2211      1234567778888999999999999873


No 380
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.71  E-value=2.6e-08  Score=70.84  Aligned_cols=85  Identities=16%  Similarity=0.170  Sum_probs=61.6

Q ss_pred             CcccccCCccc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            2 APEYASDGQFS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         2 apE~~~~~~~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      .||.++|..|. ..+|.|++||++|.+++|..||+..+..       .+.+.+..|...+..           .+.....
T Consensus       220 SPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-------~lvrQIs~GaYrEP~-----------~PSdA~g  281 (668)
T KOG0611|consen  220 SPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-------RLVRQISRGAYREPE-----------TPSDASG  281 (668)
T ss_pred             CccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-------HHHHHhhcccccCCC-----------CCchHHH
Confidence            58999998887 8899999999999999999998755322       112223334333222           2233455


Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhc
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      |++++|..||++|.|+.+|..+-+
T Consensus       282 LIRwmLmVNP~RRATieDiAsHWW  305 (668)
T KOG0611|consen  282 LIRWMLMVNPERRATIEDIASHWW  305 (668)
T ss_pred             HHHHHHhcCcccchhHHHHhhhhe
Confidence            778999999999999999987533


No 381
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.70  E-value=1e-08  Score=70.33  Aligned_cols=102  Identities=14%  Similarity=0.075  Sum_probs=60.3

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchH------------HHHHHH---HhcCCCcchhchhh
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLI------------GHAWKL---WNKGMPSQLIDACI   66 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~------------~~~~~~---~~~~~~~~~~~~~~   66 (149)
                      |||++.+..|...+|+||.||++.||+.|...|...+..++...+            ..+...   .....+........
T Consensus       185 apevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~  264 (369)
T KOG0665|consen  185 APEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFS  264 (369)
T ss_pred             CchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchh
Confidence            799999888999999999999999999999876522211111111            111000   00000000000000


Q ss_pred             hcccc----------HHHHHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           67 QDLCN----------FAEVIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        67 ~~~~~----------~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      ....+          ......+.+++.++|..+|++|-++.++|++-
T Consensus       265 ~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP  311 (369)
T KOG0665|consen  265 ELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP  311 (369)
T ss_pred             hhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence            00000          01123467899999999999999999999853


No 382
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.69  E-value=5.4e-08  Score=71.12  Aligned_cols=102  Identities=21%  Similarity=0.237  Sum_probs=65.5

Q ss_pred             CCcccccCC-------ccccCCcchhhhHhHHHHHhcccCCCCCCCCccc-chHHHHHHHHhcCCCcchhchhhhccccH
Q 043384            1 MAPEYASDG-------QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKL-NLIGHAWKLWNKGMPSQLIDACIQDLCNF   72 (149)
Q Consensus         1 ~apE~~~~~-------~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (149)
                      .|||.+.+.       ..+.+.|+||||++++|+++...||......... .++..    +.. .......+......  
T Consensus       118 ~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~----~~~-~~~~~~rP~i~~~~--  190 (484)
T KOG1023|consen  118 TAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILR----VKK-GGSNPFRPSIELLN--  190 (484)
T ss_pred             cCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHH----HHh-cCCCCcCcchhhhh--
Confidence            367877653       1467899999999999999999998654332222 22222    222 11111222222111  


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccCCcC
Q 043384           73 AEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSETVL  109 (149)
Q Consensus        73 ~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  109 (149)
                      +....++.++.+||..+|.+||++.++...++.....
T Consensus       191 e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  191 ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            2223577899999999999999999999988776643


No 383
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.63  E-value=9.3e-08  Score=65.85  Aligned_cols=102  Identities=12%  Similarity=0.111  Sum_probs=59.8

Q ss_pred             CcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCccc---chHHHHHHHHh-cCCCcchhchhhhcc-------
Q 043384            2 APEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKL---NLIGHAWKLWN-KGMPSQLIDACIQDL-------   69 (149)
Q Consensus         2 apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~-------   69 (149)
                      |||.+.|. .|+.+.|||++||++.|+++..+.|.....+-..   .-.+.+.+.+. -|.+.....+.+...       
T Consensus       207 APELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~l  286 (438)
T KOG0666|consen  207 APELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLL  286 (438)
T ss_pred             ChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHH
Confidence            79998885 4899999999999999999988876532211110   11111111111 111111111111110       


Q ss_pred             -------cc---HH---H-----HHHHHHHHHHhcCCCCCCCCChHHHHHHh
Q 043384           70 -------CN---FA---E-----VIRCIHIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        70 -------~~---~~---~-----~~~~~~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                             ++   +.   .     .....+|+..+|..||-+|-++.+.++..
T Consensus       287 s~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  287 SDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence                   00   00   0     11267889999999999999999998754


No 384
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.60  E-value=2.6e-08  Score=68.94  Aligned_cols=84  Identities=15%  Similarity=0.216  Sum_probs=54.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++-...|..+.|+|.+||++|||+.|+.||-  ..++.. +...+.  +.+-..+..+.            .....
T Consensus       335 LAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy--n~dh~k-LFeLIl--~ed~kFPr~ls------------~eAkt  397 (516)
T KOG0690|consen  335 LAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY--NKDHEK-LFELIL--MEDLKFPRTLS------------PEAKT  397 (516)
T ss_pred             cCchhhccccccceeehhhhhHHHHHHHhccCccc--ccchhH-HHHHHH--hhhccCCccCC------------HHHHH
Confidence            58999999999999999999999999999999963  222222 111111  11111111111            23345


Q ss_pred             HHHHhcCCCCCCCC-----ChHHHHH
Q 043384           81 IGLLCVQQHPEDRP-----CMPSVIL  101 (149)
Q Consensus        81 l~~~cl~~~p~~Rp-----s~~~vl~  101 (149)
                      |+...|.+||.+|.     .+.+|++
T Consensus       398 LLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  398 LLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             HHHHHhhcChHhhcCCCchhHHHHHh
Confidence            77789999999994     4556665


No 385
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.58  E-value=5.1e-08  Score=67.87  Aligned_cols=85  Identities=18%  Similarity=0.322  Sum_probs=55.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCc-ccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDN-KLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||.+.+..|....|+|++||+++||+.|+.||+-...+. ..+..+...+.+.+... .+. +        .-..+..
T Consensus       418 iapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi-rip-r--------slsvkas  487 (593)
T KOG0695|consen  418 IAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI-RIP-R--------SLSVKAS  487 (593)
T ss_pred             cchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc-ccc-c--------eeehhhH
Confidence            58999999999999999999999999999999998554322 22333333333322111 110 0        0012344


Q ss_pred             HHHHHhcCCCCCCCCC
Q 043384           80 HIGLLCVQQHPEDRPC   95 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps   95 (149)
                      .+++.-|.+||.+|..
T Consensus       488 ~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  488 HVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHHHHhhcCCcHHhcC
Confidence            5667888999998854


No 386
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.57  E-value=4.5e-08  Score=71.26  Aligned_cols=87  Identities=16%  Similarity=0.176  Sum_probs=62.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIH   80 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
                      +|||++....+..++|.|++|++++|+++|.+||...++....+++......+   ..+..+.            ....+
T Consensus       586 VAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i---~~Pr~I~------------k~a~~  650 (732)
T KOG0614|consen  586 VAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI---EFPRRIT------------KTATD  650 (732)
T ss_pred             ccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh---hcccccc------------hhHHH
Confidence            48999988899999999999999999999999998877776665554433322   1111111            23445


Q ss_pred             HHHHhcCCCCCCCCC-----hHHHHHH
Q 043384           81 IGLLCVQQHPEDRPC-----MPSVILM  102 (149)
Q Consensus        81 l~~~cl~~~p~~Rps-----~~~vl~~  102 (149)
                      ++++.+.-+|.+|..     ..+|.++
T Consensus       651 Lik~LCr~~P~ERLG~~~~gI~DIkkH  677 (732)
T KOG0614|consen  651 LIKKLCRDNPTERLGYQKGGINDIKKH  677 (732)
T ss_pred             HHHHHHhcCcHhhhccccCChHHHHhh
Confidence            777888889999865     5666654


No 387
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.55  E-value=2.4e-07  Score=66.68  Aligned_cols=107  Identities=19%  Similarity=0.173  Sum_probs=64.7

Q ss_pred             CCcccccCCc-cc-----cCCcchhhhHhHHHHHhcccCCC--------CCC--CCcccchHHHHHHHHhcCC-Ccchhc
Q 043384            1 MAPEYASDGQ-FS-----VKSDVFSFGVLLLEIVSGKRNRG--------FYH--SDNKLNLIGHAWKLWNKGM-PSQLID   63 (149)
Q Consensus         1 ~apE~~~~~~-~~-----~~~dv~s~g~~l~e~~~~~~p~~--------~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~   63 (149)
                      ||||++-+.- +.     .+.|||++|.++||+++++.-+.        ..+  ..+.....+.++..+.... .+.+.+
T Consensus       385 MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~  464 (534)
T KOG3653|consen  385 MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD  464 (534)
T ss_pred             cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh
Confidence            8999986532 22     57899999999999998665321        110  1122223344443332222 222222


Q ss_pred             hhhhccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHhccCCcCCC
Q 043384           64 ACIQDLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILMLGSETVLSQ  111 (149)
Q Consensus        64 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~~  111 (149)
                      .....    .....+.+.+..||..|++.|.|+.-+.+.+..+.....
T Consensus       465 ~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  465 AWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             hhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence            21111    223456677889999999999999999988877665443


No 388
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.54  E-value=2.1e-08  Score=67.89  Aligned_cols=91  Identities=18%  Similarity=0.223  Sum_probs=58.3

Q ss_pred             CCccccc------CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHH
Q 043384            1 MAPEYAS------DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAE   74 (149)
Q Consensus         1 ~apE~~~------~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (149)
                      +|||.+.      ...|+...|.|+.||+++.++.|++||  ++..+..     +..++..|.. ....+..++.     
T Consensus       189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPF--wHRkQml-----MLR~ImeGky-qF~speWadi-----  255 (411)
T KOG0599|consen  189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPF--WHRKQML-----MLRMIMEGKY-QFRSPEWADI-----  255 (411)
T ss_pred             cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCch--hHHHHHH-----HHHHHHhccc-ccCCcchhhc-----
Confidence            4777763      245899999999999999999999995  3322111     1122223322 1112222211     


Q ss_pred             HHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           75 VIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        75 ~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .....+|+.+||+.||.+|-|+.|.+.+-.
T Consensus       256 s~~~KdLIsrlLqVdp~~Ritake~LaHpf  285 (411)
T KOG0599|consen  256 SATVKDLISRLLQVDPTKRITAKEALAHPF  285 (411)
T ss_pred             cccHHHHHHHHHeeCchhcccHHHHhcChH
Confidence            122445778999999999999999998543


No 389
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.52  E-value=1.4e-07  Score=63.39  Aligned_cols=101  Identities=13%  Similarity=0.123  Sum_probs=63.2

Q ss_pred             CcccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchh----h------h---
Q 043384            2 APEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDAC----I------Q---   67 (149)
Q Consensus         2 apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~---   67 (149)
                      .||.+.| ..|..+.|+|.-||++.||+++.+.++.....+...++......+...-.+.+..-.    +      .   
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~  275 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQK  275 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchh
Confidence            4676665 569999999999999999999988766555455555544443221111111110000    0      0   


Q ss_pred             -----ccccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           68 -----DLCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        68 -----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                           ...+...-...++|+..++..||.+|+.+++++.+
T Consensus       276 rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  276 RKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             hhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence                 00111111257789999999999999999999874


No 390
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.48  E-value=6.1e-08  Score=71.38  Aligned_cols=85  Identities=16%  Similarity=0.202  Sum_probs=59.8

Q ss_pred             CCcccccCCccc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHH--HHHH
Q 043384            1 MAPEYASDGQFS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFA--EVIR   77 (149)
Q Consensus         1 ~apE~~~~~~~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   77 (149)
                      .|||++.+..|. ..+|+|++|+++|.++.|..||+.-.                   +.+.-.+.....+...  -..+
T Consensus       221 AaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-------------------lk~Lr~rvl~gk~rIp~~ms~d  281 (596)
T KOG0586|consen  221 AAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-------------------LKELRPRVLRGKYRIPFYMSCD  281 (596)
T ss_pred             cChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-------------------cccccchheeeeecccceeech
Confidence            379999998877 89999999999999999999986321                   1111112221111111  1234


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      +-+++.++|..+|.+|++++++++.-+
T Consensus       282 ce~lLrk~lvl~Pskr~~~dqim~~~W  308 (596)
T KOG0586|consen  282 CEDLLRKFLVLNPSKRGPCDQIMKDRW  308 (596)
T ss_pred             hHHHHHHhhccCccccCCHHHhhhhcc
Confidence            566888999999999999999998543


No 391
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.47  E-value=2e-07  Score=60.53  Aligned_cols=55  Identities=35%  Similarity=0.506  Sum_probs=44.8

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      ++||.+... .++.+.|+|++|++++++                                                ..+.
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------~~~~  191 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------PELK  191 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------HHHH
Confidence            357777665 778899999999999998                                                3345


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHHh
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILML  103 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~l  103 (149)
                      +++..|+..+|++||++.++++.+
T Consensus       192 ~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         192 DLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHhhCCcccCcCHHHHhhCC
Confidence            577799999999999999998653


No 392
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.47  E-value=6.7e-08  Score=73.92  Aligned_cols=88  Identities=23%  Similarity=0.317  Sum_probs=61.9

Q ss_pred             CCccccc-----CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH
Q 043384            1 MAPEYAS-----DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV   75 (149)
Q Consensus         1 ~apE~~~-----~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (149)
                      ||||++.     ...|+..+|+||+|++..|+.-|.+|+..-++....       ..+..+.++....       +..-.
T Consensus       190 MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL-------F~IpRNPPPkLkr-------p~kWs  255 (953)
T KOG0587|consen  190 MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL-------FLIPRNPPPKLKR-------PKKWS  255 (953)
T ss_pred             ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh-------ccCCCCCCccccc-------hhhHH
Confidence            8999984     356889999999999999999999996544433221       1122233322221       12224


Q ss_pred             HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           76 IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .++.+++..||.+|-.+||++.+++++
T Consensus       256 ~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  256 KKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             HHHHHHHHHHHhhccccCcchhhhccC
Confidence            567788889999999999999998874


No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.43  E-value=2.1e-07  Score=63.17  Aligned_cols=103  Identities=16%  Similarity=0.176  Sum_probs=62.7

Q ss_pred             CcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHH--------HHhcCCCcchhc-----hhhh
Q 043384            2 APEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWK--------LWNKGMPSQLID-----ACIQ   67 (149)
Q Consensus         2 apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-----~~~~   67 (149)
                      |||.+.|. .|+.+.||||+||++.|++..+..|+...+..+..++-....        ...+|.-.-++.     +...
T Consensus       225 APEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~  304 (449)
T KOG0664|consen  225 APELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQ  304 (449)
T ss_pred             cHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCcc
Confidence            78988875 599999999999999999998888876666555544433211        011111000111     1111


Q ss_pred             ccccHHH----HHHHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           68 DLCNFAE----VIRCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        68 ~~~~~~~----~~~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      .++....    .-..+.+...++..||++|.+-.+.+..+.
T Consensus       305 vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  305 RLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             ceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            1121111    123455666788999999998888877543


No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.39  E-value=1.5e-07  Score=61.41  Aligned_cols=37  Identities=35%  Similarity=0.512  Sum_probs=32.2

Q ss_pred             CCcccccC----CccccCCcchhhhHhHHHHHhcccCCCCC
Q 043384            1 MAPEYASD----GQFSVKSDVFSFGVLLLEIVSGKRNRGFY   37 (149)
Q Consensus         1 ~apE~~~~----~~~~~~~dv~s~g~~l~e~~~~~~p~~~~   37 (149)
                      ||||.+..    ..|+.++||||+|+.+.|+.+++.||+.+
T Consensus       215 maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  215 MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             CChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence            78988743    46999999999999999999999998754


No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.37  E-value=9.3e-08  Score=72.83  Aligned_cols=86  Identities=17%  Similarity=0.228  Sum_probs=57.1

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhc-ccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSG-KRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++....-+.++|++++||+++.+++| ..||......+.         .+..+..      ....+.+.... ...
T Consensus       681 ~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~---------NIl~~~~------~L~~L~~~~d~-eA~  744 (903)
T KOG1027|consen  681 QAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA---------NILTGNY------TLVHLEPLPDC-EAK  744 (903)
T ss_pred             cCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh---------hhhcCcc------ceeeeccCchH-HHH
Confidence            589999988888899999999999998875 788753221100         0001100      01111111101 566


Q ss_pred             HHHHHhcCCCCCCCCChHHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +|+.+++..+|..||++.+|+.+
T Consensus       745 dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  745 DLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             HHHHHhcCCCcccCCCHHHHhCC
Confidence            78889999999999999999963


No 396
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.16  E-value=1e-06  Score=66.73  Aligned_cols=98  Identities=14%  Similarity=0.129  Sum_probs=60.9

Q ss_pred             CCcccccCCccc-cCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFS-VKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~-~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      +|||++.+..|. ...||||.|+++..|..|+.||.............    ....+.........+...    -.....
T Consensus       491 ~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~----~~~~~~~~~~~~~~~~~~----lp~~~~  562 (601)
T KOG0590|consen  491 LAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN----NYSDQRNIFEGPNRLLSL----LPRETR  562 (601)
T ss_pred             cCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh----ccccccccccChHHHHHh----chhhHH
Confidence            589999998888 78899999999999999999976443322211000    000000000000000000    012355


Q ss_pred             HHHHHhcCCCCCCCCChHHHHH--HhccC
Q 043384           80 HIGLLCVQQHPEDRPCMPSVIL--MLGSE  106 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~--~l~~~  106 (149)
                      .++.++|+.+|.+|.++.+|++  |++.+
T Consensus       563 ~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  563 IIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HHHHHHccCChhheecHHHHhhChHhhhc
Confidence            6788999999999999999996  45444


No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.16  E-value=9.5e-07  Score=66.29  Aligned_cols=38  Identities=26%  Similarity=0.357  Sum_probs=34.6

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYH   38 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~   38 (149)
                      +|||++....|+..||+|+.||+|+||+.|+.||..-.
T Consensus       838 iapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  838 IAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             cChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence            68999999999999999999999999999999985433


No 398
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.11  E-value=3.2e-06  Score=66.80  Aligned_cols=34  Identities=26%  Similarity=0.590  Sum_probs=29.6

Q ss_pred             CCccccc----C-CccccCCcchhhhHhHHHHHhcccCC
Q 043384            1 MAPEYAS----D-GQFSVKSDVFSFGVLLLEIVSGKRNR   34 (149)
Q Consensus         1 ~apE~~~----~-~~~~~~~dv~s~g~~l~e~~~~~~p~   34 (149)
                      ++||++.    + +.|...+|+||+||++|||++|..||
T Consensus       243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF  281 (1317)
T KOG0612|consen  243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF  281 (1317)
T ss_pred             cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence            4688773    3 67999999999999999999999995


No 399
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.02  E-value=1.1e-05  Score=64.11  Aligned_cols=86  Identities=17%  Similarity=0.240  Sum_probs=54.2

Q ss_pred             CCcccccCC-----------ccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhc
Q 043384            1 MAPEYASDG-----------QFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQD   68 (149)
Q Consensus         1 ~apE~~~~~-----------~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (149)
                      +|||.+..+           ..+++.||||.||+++|++. |+++|...          ....+ ..+. .......++.
T Consensus       194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----------QL~aY-r~~~-~~~~e~~Le~  261 (1431)
T KOG1240|consen  194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----------QLLAY-RSGN-ADDPEQLLEK  261 (1431)
T ss_pred             cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----------HHHhH-hccC-ccCHHHHHHh
Confidence            478877431           26789999999999999987 78887521          11111 1111 0001111111


Q ss_pred             cccHHHHHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           69 LCNFAEVIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        69 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                          .+...+.++++.|++.||.+|.++++.++.
T Consensus       262 ----Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  262 ----IEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ----CcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence                111246678889999999999999999984


No 400
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.98  E-value=4.8e-06  Score=62.77  Aligned_cols=39  Identities=26%  Similarity=0.443  Sum_probs=32.7

Q ss_pred             CCccccc-CCccccCCcchhhhHhHHHHHhcccCCCCCCC
Q 043384            1 MAPEYAS-DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHS   39 (149)
Q Consensus         1 ~apE~~~-~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~   39 (149)
                      ++||.+- ...|+.-+|.|||||++|++.+|..||..+..
T Consensus       190 LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  190 LHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence            3677776 47899999999999999999999999865543


No 401
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=97.93  E-value=5.1e-06  Score=60.70  Aligned_cols=80  Identities=20%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      |+||.+.+..|+.++|+|++|++++|++. -...++..          ....-+..+.++    +.....+     +.-.
T Consensus       429 msPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----------~t~~d~r~g~ip----~~~~~d~-----p~e~  489 (516)
T KOG1033|consen  429 MSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----------ATLTDIRDGIIP----PEFLQDY-----PEEY  489 (516)
T ss_pred             CCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----------HhhhhhhcCCCC----hHHhhcC-----cHHH
Confidence            78999999999999999999999999986 33332211          000111222222    1111111     1234


Q ss_pred             HHHHHhcCCCCCCCCChHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSV   99 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~v   99 (149)
                      .|+.+++...|.+||++.++
T Consensus       490 ~ll~~lls~~p~~RP~~~~~  509 (516)
T KOG1033|consen  490 TLLQQLLSPSPEERPSAIEV  509 (516)
T ss_pred             HHHHHhcCCCcccCchHHHH
Confidence            57889999999999955443


No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.93  E-value=1.6e-05  Score=53.05  Aligned_cols=99  Identities=14%  Similarity=0.129  Sum_probs=55.6

Q ss_pred             cccccC-CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHH--HHH------HHHh--cCCCcchhchhhh--cc
Q 043384            3 PEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIG--HAW------KLWN--KGMPSQLIDACIQ--DL   69 (149)
Q Consensus         3 pE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~--~~~------~~~~--~~~~~~~~~~~~~--~~   69 (149)
                      ||.+.. ..|.-.-|+|||||++..|+..+.||- ...+..+.+.-  .+.      ..+.  .-.+.........  ..
T Consensus       201 PELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF-hG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~r  279 (338)
T KOG0668|consen  201 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF-HGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSR  279 (338)
T ss_pred             chheeechhccccHHHHHHHHHHHHHHhccCccc-CCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccc
Confidence            455432 457888999999999999999999963 22222222211  111      0000  0001111110000  01


Q ss_pred             ccHHH----------HHHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           70 CNFAE----------VIRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        70 ~~~~~----------~~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .++..          ....++++-+.|..|..+|+|+.|.+.+
T Consensus       280 k~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  280 KPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             ccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            11111          1457888889999999999999998864


No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.90  E-value=1.3e-05  Score=59.71  Aligned_cols=29  Identities=3%  Similarity=-0.097  Sum_probs=22.1

Q ss_pred             HHHHHHHHHhcCCCC---CCCCChHHHHHHhc
Q 043384           76 IRCIHIGLLCVQQHP---EDRPCMPSVILMLG  104 (149)
Q Consensus        76 ~~~~~l~~~cl~~~p---~~Rps~~~vl~~l~  104 (149)
                      ....+++.++|..++   .+|+|+.+++.+-.
T Consensus       471 ~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~  502 (507)
T PLN03224        471 EAGWDLACKLITKRDQANRGRLSVGQALSHRF  502 (507)
T ss_pred             hHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence            345677888888765   68999999997643


No 404
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.86  E-value=1.8e-05  Score=59.70  Aligned_cols=88  Identities=20%  Similarity=0.312  Sum_probs=57.6

Q ss_pred             CCcccc---cCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcC-CCcchhchhhhccccHHHHH
Q 043384            1 MAPEYA---SDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKG-MPSQLIDACIQDLCNFAEVI   76 (149)
Q Consensus         1 ~apE~~---~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   76 (149)
                      ||||+.   ..+.|+.++|+|+.|+...|+.-.++|.-..++.+..      ..+...+ .++..-++     ..+  ..
T Consensus       179 mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l------~LmTkS~~qpp~lkDk-----~kw--s~  245 (829)
T KOG0576|consen  179 MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRAL------FLMTKSGFQPPTLKDK-----TKW--SE  245 (829)
T ss_pred             cchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHH------HHhhccCCCCCcccCC-----ccc--hH
Confidence            789986   4577999999999999999998777774333332221      1111112 22222221     111  23


Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHH
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      .+.+|++.|+-++|.+||+++.+++
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhhee
Confidence            4667888999999999999998876


No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.82  E-value=1.1e-05  Score=54.93  Aligned_cols=83  Identities=14%  Similarity=0.130  Sum_probs=49.6

Q ss_pred             cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHHHHHHhcCCCC
Q 043384           11 FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIHIGLLCVQQHP   90 (149)
Q Consensus        11 ~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p   90 (149)
                      ....+|+|.||++++.+++|+.|++ .....+.....|  ..|..+..+... ....     .....+..+-++-+..++
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQ-ka~~~d~~Y~~~--~~w~~rk~~~~P-~~F~-----~fs~~a~r~Fkk~lt~~~  272 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQ-KASIMDKPYWEW--EQWLKRKNPALP-KKFN-----PFSEKALRLFKKSLTPRF  272 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcch-hhhccCchHHHH--HHHhcccCccCc-hhhc-----ccCHHHHHHHHHhcCCcc
Confidence            5688999999999999999999987 322233333333  333333332111 1111     112345556668899999


Q ss_pred             CCCCChHHHHHH
Q 043384           91 EDRPCMPSVILM  102 (149)
Q Consensus        91 ~~Rps~~~vl~~  102 (149)
                      ++|-...++.++
T Consensus       273 ~drcki~~~kk~  284 (378)
T KOG1345|consen  273 KDRCKIWTAKKM  284 (378)
T ss_pred             cccchhHHHHHH
Confidence            999555555543


No 406
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.81  E-value=3.5e-05  Score=49.59  Aligned_cols=101  Identities=13%  Similarity=0.121  Sum_probs=56.2

Q ss_pred             CcccccCC-ccccCCcchhhhHhHHHHHh-cccCCCCCCCCcccchHHHHHHHHhcCCCcchh---chhhhcccc----H
Q 043384            2 APEYASDG-QFSVKSDVFSFGVLLLEIVS-GKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLI---DACIQDLCN----F   72 (149)
Q Consensus         2 apE~~~~~-~~~~~~dv~s~g~~l~e~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~   72 (149)
                      +|.++-+. .|++..|+||-||++.|+.. |++.|...+-+.+...+-+......+...+.+.   +-..-..++    +
T Consensus       169 ppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsw  248 (292)
T KOG0662|consen  169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSW  248 (292)
T ss_pred             CcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchH
Confidence            35566554 48999999999999999986 666655443333332333322221111111110   000001111    1


Q ss_pred             HHH-----HHHHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           73 AEV-----IRCIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        73 ~~~-----~~~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      .+.     ..-.+++...+.-+|.+|-+++..+++
T Consensus       249 sqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  249 SQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             HHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            111     134667778888899999999888764


No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.77  E-value=1.4e-05  Score=56.84  Aligned_cols=33  Identities=30%  Similarity=0.402  Sum_probs=27.8

Q ss_pred             CcccccC-CccccCCcchhhhHhHHHHHhcccCC
Q 043384            2 APEYASD-GQFSVKSDVFSFGVLLLEIVSGKRNR   34 (149)
Q Consensus         2 apE~~~~-~~~~~~~dv~s~g~~l~e~~~~~~p~   34 (149)
                      |||++.. ..=++++||||.||++.-+++++.||
T Consensus       245 aPEvL~k~~~QttaiDiws~GVI~Lslls~~~PF  278 (418)
T KOG1167|consen  245 APEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPF  278 (418)
T ss_pred             chHHHhhccCcCCccceeeccceeehhhcccccc
Confidence            6788643 45578999999999999999999986


No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.72  E-value=2e-05  Score=51.92  Aligned_cols=35  Identities=29%  Similarity=0.522  Sum_probs=30.0

Q ss_pred             CCcccc-cCCccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYA-SDGQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~-~~~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      ++||.+ ....++.++|+|++|++++++++|+.||.
T Consensus       166 ~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      166 LAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             CCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            467777 55677789999999999999999999974


No 409
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.57  E-value=8.6e-05  Score=53.36  Aligned_cols=86  Identities=17%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             CCcccccCC--c----cccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHH
Q 043384            1 MAPEYASDG--Q----FSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAE   74 (149)
Q Consensus         1 ~apE~~~~~--~----~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (149)
                      ||||+...-  +    -..|+|.|+.|.+.||++....||   +..+...+-..-   ..+..++...         ..+
T Consensus       418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPF---Y~rGem~L~~r~---Yqe~qLPalp---------~~v  482 (598)
T KOG4158|consen  418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPF---YKRGEMLLDTRT---YQESQLPALP---------SRV  482 (598)
T ss_pred             cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcc---cccchheechhh---hhhhhCCCCc---------ccC
Confidence            789987431  1    227899999999999999888885   111111111111   1122222221         122


Q ss_pred             HHHHHHHHHHhcCCCCCCCCChHHHHH
Q 043384           75 VIRCIHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        75 ~~~~~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      ......++...|+.||.+|++..-...
T Consensus       483 pp~~rqlV~~lL~r~pskRvsp~iAAN  509 (598)
T KOG4158|consen  483 PPVARQLVFDLLKRDPSKRVSPNIAAN  509 (598)
T ss_pred             ChHHHHHHHHHhcCCccccCCccHHHh
Confidence            334556777999999999998754443


No 410
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.40  E-value=8.9e-06  Score=60.11  Aligned_cols=85  Identities=16%  Similarity=0.173  Sum_probs=56.2

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHH-HHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEV-IRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   79 (149)
                      +|||++....|+..-|+||+||++|.-++|..||..   +.+.  -+.    +++....-       ...+|.+. ...+
T Consensus       733 LaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE---dEdI--ndQ----IQNAaFMy-------Pp~PW~eis~~Ai  796 (888)
T KOG4236|consen  733 LAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE---DEDI--NDQ----IQNAAFMY-------PPNPWSEISPEAI  796 (888)
T ss_pred             cCHHHHhhccccccccceeeeEEEEEEecccccCCC---ccch--hHH----hhcccccc-------CCCchhhcCHHHH
Confidence            589999999999999999999999999999999742   1111  111    11111000       01122222 2456


Q ss_pred             HHHHHhcCCCCCCCCChHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      +|+-..|+..-.+|.+.++-+.
T Consensus       797 dlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  797 DLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             HHHHHHHHHHHHHhcchHhhcc
Confidence            6777888888889988887764


No 411
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.28  E-value=0.00011  Score=58.21  Aligned_cols=35  Identities=23%  Similarity=0.333  Sum_probs=31.9

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      .||||+.-..|...+|+|++|++++|++.|+.||.
T Consensus       225 iaPeVilrqgygkpvdwwamGiIlyeFLVgcvpff  259 (1205)
T KOG0606|consen  225 IAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF  259 (1205)
T ss_pred             cChhhhhhhccCCCccHHHHHHHHHHHheeeeecc
Confidence            47888888889999999999999999999999964


No 412
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.20  E-value=0.00037  Score=48.31  Aligned_cols=64  Identities=17%  Similarity=0.278  Sum_probs=39.4

Q ss_pred             CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHHHHHHhcCC
Q 043384            9 GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIHIGLLCVQQ   88 (149)
Q Consensus         9 ~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~   88 (149)
                      ..++.+.|.|.+|+++|.+++++.||.........                    ...-..|. .-+.....|+.+.|+.
T Consensus       225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~--------------------~~~f~~C~-~~Pe~v~~LI~~lL~~  283 (288)
T PF14531_consen  225 APYTFATDAWQLGITLYSLWCGRLPFGLSSPEADP--------------------EWDFSRCR-DMPEPVQFLIRGLLQR  283 (288)
T ss_dssp             EEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTS--------------------GGGGTTSS----HHHHHHHHHHT-S
T ss_pred             ceeeeccCHHHHHHHHHHHHHccCCCCCCCccccc--------------------cccchhcC-CcCHHHHHHHHHHccC
Confidence            35889999999999999999999998643211110                    00112233 3334556678899999


Q ss_pred             CCCCC
Q 043384           89 HPEDR   93 (149)
Q Consensus        89 ~p~~R   93 (149)
                      +|.+|
T Consensus       284 ~~~~R  288 (288)
T PF14531_consen  284 NPEDR  288 (288)
T ss_dssp             SGGGS
T ss_pred             CcccC
Confidence            99887


No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.61  E-value=0.001  Score=50.12  Aligned_cols=33  Identities=36%  Similarity=0.548  Sum_probs=29.5

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRG   35 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~   35 (149)
                      ||||+++  .+....|.|+||++++++++|..||.
T Consensus       160 mApEI~~--gh~~a~D~ws~gvl~felltg~~pf~  192 (612)
T KOG0603|consen  160 RAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFG  192 (612)
T ss_pred             hhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCc
Confidence            6888887  56788999999999999999999975


No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=96.34  E-value=0.018  Score=39.47  Aligned_cols=98  Identities=17%  Similarity=0.108  Sum_probs=56.6

Q ss_pred             CCcccccC---CccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHH
Q 043384            1 MAPEYASD---GQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIR   77 (149)
Q Consensus         1 ~apE~~~~---~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
                      ++||.+.+   ..+....|+|++|+++++++.+..|+......   .........+............. ..........
T Consensus       175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  250 (384)
T COG0515         175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS---SATSQTLKIILELPTPSLASPLS-PSNPELISKA  250 (384)
T ss_pred             CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc---ccHHHHHHHHHhcCCcccccccC-ccccchhhHH
Confidence            47888876   57889999999999999999999885533221   01111111111111110000000 0000111234


Q ss_pred             HHHHHHHhcCCCCCCCCChHHHHHH
Q 043384           78 CIHIGLLCVQQHPEDRPCMPSVILM  102 (149)
Q Consensus        78 ~~~l~~~cl~~~p~~Rps~~~vl~~  102 (149)
                      +.+++..++..+|..|.+.......
T Consensus       251 ~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         251 ASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHHhcCchhcCCHHHHhhc
Confidence            5667888999999999988876653


No 415
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=95.80  E-value=0.0093  Score=42.29  Aligned_cols=30  Identities=27%  Similarity=0.412  Sum_probs=22.5

Q ss_pred             cccccCCccccCCcchhhhHhHHHHHhccc
Q 043384            3 PEYASDGQFSVKSDVFSFGVLLLEIVSGKR   32 (149)
Q Consensus         3 pE~~~~~~~~~~~dv~s~g~~l~e~~~~~~   32 (149)
                      ||+-...+.+.++|||+||+..+++..+..
T Consensus       251 ~~sg~~tn~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  251 PESGTTTNTTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             CCcCcccccccchhhhhhhHHHHHHHHhee
Confidence            444444567789999999999999877654


No 416
>PF11883 DUF3403:  Domain of unknown function (DUF3403);  InterPro: IPR021820  This functionally uncharacterised domain of around 50 amino acids is found in the C terminus of eukaryotic S-locus receptor kinase proteins. ; GO: 0004674 protein serine/threonine kinase activity
Probab=94.79  E-value=0.08  Score=26.41  Aligned_cols=43  Identities=49%  Similarity=0.709  Sum_probs=34.8

Q ss_pred             CcCCCCCCCCcccccccCCCCCCCCCC--CCCCcCceeeeeecCC
Q 043384          107 TVLSQPKQPGYLAHRKSTRPDSSSSMP--ESSSTNTIMISELEGR  149 (149)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  149 (149)
                      ..++.+++|.|...+.......+.+..  ...+.|..+++-+++|
T Consensus         4 ~~LP~PKqPgF~~~r~~~e~~sSss~~~~~~~SvNevTiT~l~~R   48 (48)
T PF11883_consen    4 ATLPQPKQPGFFTGRSPSETDSSSSKQRDESCSVNEVTITMLEAR   48 (48)
T ss_pred             ccCCCCCCCCEEeEcCCCCcCCCcccccCCCCCeeeEEEEeEecC
Confidence            357788999999888877766666555  7888899999999988


No 417
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=91.79  E-value=0.041  Score=41.62  Aligned_cols=22  Identities=41%  Similarity=0.617  Sum_probs=18.8

Q ss_pred             cCCcchhhhHhHHHHHhcccCC
Q 043384           13 VKSDVFSFGVLLLEIVSGKRNR   34 (149)
Q Consensus        13 ~~~dv~s~g~~l~e~~~~~~p~   34 (149)
                      +|+|||++|.++.++.-|...+
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~  131 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLE  131 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHH
Confidence            6999999999999988776543


No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=91.49  E-value=0.14  Score=41.73  Aligned_cols=37  Identities=27%  Similarity=0.339  Sum_probs=32.8

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhcccCCCCC
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSGKRNRGFY   37 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~   37 (149)
                      ++||...+......+|+|++|++++|.++|.+||...
T Consensus      1002 laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1002 LAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             cCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence            4688888888999999999999999999999997543


No 419
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=91.21  E-value=0.046  Score=42.20  Aligned_cols=88  Identities=19%  Similarity=0.116  Sum_probs=49.4

Q ss_pred             CCcccccCCccccCCcchhhhHhHHHHHhc-ccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHH
Q 043384            1 MAPEYASDGQFSVKSDVFSFGVLLLEIVSG-KRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCI   79 (149)
Q Consensus         1 ~apE~~~~~~~~~~~dv~s~g~~l~e~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (149)
                      .|||++.+...+.++|++|+|+.++-+..+ +..+.........     ..... .....   ........    +.++.
T Consensus       176 ~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-----~~~~~-~~~~~---~~~~s~~~----p~el~  242 (700)
T KOG2137|consen  176 LAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-----SFSRN-LLNAG---AFGYSNNL----PSELR  242 (700)
T ss_pred             ccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchh-----hhhhc-ccccc---cccccccC----cHHHH
Confidence            478999888888999999999999998854 4433322111100     00000 00000   00000111    12344


Q ss_pred             HHHHHhcCCCCCCCCChHHHHH
Q 043384           80 HIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        80 ~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      +-+.+.+..+...||++..+..
T Consensus       243 ~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  243 ESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             HHHHHHhcCCcccCcchhhhhc
Confidence            4566888999999997766654


No 420
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=90.92  E-value=0.082  Score=40.80  Aligned_cols=88  Identities=16%  Similarity=0.166  Sum_probs=51.0

Q ss_pred             CCcccccCC-ccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHH-HHHH
Q 043384            1 MAPEYASDG-QFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAE-VIRC   78 (149)
Q Consensus         1 ~apE~~~~~-~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~   78 (149)
                      +|||...+. -.....|+|+.|+++..+++|..|++........ ...|..     .....       ....+.. ....
T Consensus       196 ~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~~-----~~~~~-------~~~~~~~~~~~~  262 (601)
T KOG0590|consen  196 GAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWKS-----NKGRF-------TQLPWNSISDQA  262 (601)
T ss_pred             CCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeecc-----ccccc-------ccCccccCChhh
Confidence            478887764 3457889999999999999999997654332211 111111     10000       0000000 1123


Q ss_pred             HHHHHHhcCCCCCCCCChHHHHH
Q 043384           79 IHIGLLCVQQHPEDRPCMPSVIL  101 (149)
Q Consensus        79 ~~l~~~cl~~~p~~Rps~~~vl~  101 (149)
                      .++...++..++..|.+.+++..
T Consensus       263 ~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  263 HDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             hhcccccccCCchhccccccccc
Confidence            34555777788999988877765


No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=84.86  E-value=3.6  Score=29.18  Aligned_cols=88  Identities=15%  Similarity=-0.011  Sum_probs=49.5

Q ss_pred             CCccccCCcchhhhHhHHHHHhcccCCCCCCCCcccchHHHHHHHHhcCCCcchhchhhhccccHHHHHHHHHHHHHhcC
Q 043384            8 DGQFSVKSDVFSFGVLLLEIVSGKRNRGFYHSDNKLNLIGHAWKLWNKGMPSQLIDACIQDLCNFAEVIRCIHIGLLCVQ   87 (149)
Q Consensus         8 ~~~~~~~~dv~s~g~~l~e~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~   87 (149)
                      +...+.+.|+||++-++.++..|..|+........   ...............      ....   ....+..++..+-.
T Consensus       211 ~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~---~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~~~  278 (322)
T KOG1164|consen  211 GIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL---KSKFEKDPRKLLTDR------FGDL---KPEEFAKILEYIDS  278 (322)
T ss_pred             CCccCCchhhhhHHHHHHHHhcCCCCCccccccch---HHHHHHHhhhhcccc------ccCC---ChHHHHHHHHHhhc
Confidence            34567889999999999999999988754332221   111111110000000      0011   11223334444555


Q ss_pred             CCCCCCCChHHHHHHhccCC
Q 043384           88 QHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        88 ~~p~~Rps~~~vl~~l~~~~  107 (149)
                      .+-..+|....+...++...
T Consensus       279 ~~~~~~Pdy~~~~~~l~~~~  298 (322)
T KOG1164|consen  279 LDYEDKPDYEKLAELLKDVF  298 (322)
T ss_pred             cCCcCCCCHHHHHHHHHHHH
Confidence            78889999999988876544


No 422
>cd00059 FH Forkhead (FH), also known as a "winged helix".  FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=49.54  E-value=36  Score=18.83  Aligned_cols=30  Identities=13%  Similarity=0.227  Sum_probs=23.3

Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccCCcCC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSETVLS  110 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~~~~~  110 (149)
                      |+..++...|+++.|..||.+.+.......
T Consensus         9 LI~~Ai~~sp~~~lTL~eIy~~I~~~~pyy   38 (78)
T cd00059           9 LIAMAIQSSPEKRLTLSEIYKWISDNFPYF   38 (78)
T ss_pred             HHHHHHHhCCCCCeeHHHHHHHHHHhCCcc
Confidence            444667778999999999999997765443


No 423
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=44.58  E-value=28  Score=25.50  Aligned_cols=26  Identities=15%  Similarity=-0.037  Sum_probs=16.8

Q ss_pred             CcccccCCccccCCcchhhhHhHHHH
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEI   27 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~   27 (149)
                      +|+.......+...|.+++|++-.+.
T Consensus        35 ~pv~~~~ts~s~~~s~~~~eIleesp   60 (458)
T KOG1266|consen   35 APVGENATSLSSADSEDESEILEESP   60 (458)
T ss_pred             CCccccccccCcccccchhhhhccCc
Confidence            34444445556677889998876554


No 424
>smart00339 FH FORKHEAD. FORKHEAD, also known as a "winged helix"
Probab=43.24  E-value=42  Score=19.08  Aligned_cols=29  Identities=7%  Similarity=0.194  Sum_probs=22.4

Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccCCcC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSETVL  109 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~~~~  109 (149)
                      |+..++...|+++.+..+|.+.+......
T Consensus         9 lI~~ai~~sp~~~ltl~~Iy~~I~~~~py   37 (89)
T smart00339        9 LIAMAILSSPDKRLTLSEIYKWIEDNFPY   37 (89)
T ss_pred             HHHHHHHhCCCCCeeHHHHHHHHHHhCch
Confidence            44456667799999999999988876544


No 425
>PF08189 Meleagrin:  Meleagrin/Cygnin family;  InterPro: IPR012573 This family consists of meleagrin and cygnin basic peptides that are isolated from turkey and black swan respectively. Both peptides are low in molecular weight and contain three disulphide bonds with high concentrations of aromatic residues. These peptides show similarity to transferrins and probably play some vital role in avian eggs but the exact function is still unknown [].
Probab=39.61  E-value=9.6  Score=17.64  Aligned_cols=9  Identities=44%  Similarity=0.885  Sum_probs=7.3

Q ss_pred             cCCcchhhh
Q 043384           13 VKSDVFSFG   21 (149)
Q Consensus        13 ~~~dv~s~g   21 (149)
                      .|+|+|++.
T Consensus        17 sKt~vWa~s   25 (39)
T PF08189_consen   17 SKTDVWAFS   25 (39)
T ss_pred             cccceeeec
Confidence            788999874


No 426
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=37.15  E-value=46  Score=25.47  Aligned_cols=29  Identities=17%  Similarity=0.324  Sum_probs=23.0

Q ss_pred             ccccCCcchhhhHhHHHHHhc-ccCCCCCC
Q 043384           10 QFSVKSDVFSFGVLLLEIVSG-KRNRGFYH   38 (149)
Q Consensus        10 ~~~~~~dv~s~g~~l~e~~~~-~~p~~~~~   38 (149)
                      .-+...|.|.+|+++++++.| +.||...+
T Consensus       197 ~r~~~hD~FGLavLiF~lL~ggrHPysGI~  226 (637)
T COG4248         197 ERTANHDNFGLAVLIFHLLFGGRHPYSGIP  226 (637)
T ss_pred             CCCccccchhHHHHHHHHHhcCCCCCCccc
Confidence            345778999999999998875 89987553


No 427
>PF04301 DUF452:  Protein of unknown function (DUF452);  InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=34.96  E-value=1.1e+02  Score=20.71  Aligned_cols=17  Identities=12%  Similarity=-0.001  Sum_probs=13.8

Q ss_pred             CCCCChHHHHHHhccCC
Q 043384           91 EDRPCMPSVILMLGSET  107 (149)
Q Consensus        91 ~~Rps~~~vl~~l~~~~  107 (149)
                      ..|++..++.++|..+.
T Consensus       137 ~~r~~~~elk~EL~~l~  153 (213)
T PF04301_consen  137 PPRRSFEELKEELAALY  153 (213)
T ss_pred             CcCCCHHHHHHHHHHHH
Confidence            46788999999998765


No 428
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=32.20  E-value=36  Score=26.34  Aligned_cols=31  Identities=35%  Similarity=0.555  Sum_probs=22.2

Q ss_pred             CcccccCCccccCCcchhhhHhHHHHHhcccC
Q 043384            2 APEYASDGQFSVKSDVFSFGVLLLEIVSGKRN   33 (149)
Q Consensus         2 apE~~~~~~~~~~~dv~s~g~~l~e~~~~~~p   33 (149)
                      +||..+ +.++.+.|+|++|.++.+...+...
T Consensus       296 ~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~  326 (524)
T KOG0601|consen  296 AKELLN-GLATFASDIFSLGEVILEAILGSHL  326 (524)
T ss_pred             Chhhhc-cccchHhhhcchhhhhHhhHhhccc
Confidence            344433 4567889999999999998776543


No 429
>PF05953 Allatostatin:  Allatostatin;  InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=29.49  E-value=24  Score=11.75  Aligned_cols=6  Identities=50%  Similarity=1.209  Sum_probs=3.3

Q ss_pred             cchhhh
Q 043384           16 DVFSFG   21 (149)
Q Consensus        16 dv~s~g   21 (149)
                      ..|+||
T Consensus         4 ~~Y~FG    9 (11)
T PF05953_consen    4 PMYSFG    9 (11)
T ss_pred             CccccC
Confidence            346665


No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=29.44  E-value=25  Score=29.34  Aligned_cols=30  Identities=17%  Similarity=0.255  Sum_probs=26.2

Q ss_pred             cccccCCccccCCcchhhhHhHHHHHhccc
Q 043384            3 PEYASDGQFSVKSDVFSFGVLLLEIVSGKR   32 (149)
Q Consensus         3 pE~~~~~~~~~~~dv~s~g~~l~e~~~~~~   32 (149)
                      +|+..|..++..+|.|.++.+++.|+.|+.
T Consensus       872 ~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  872 IEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             HHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            567778889999999999999999999875


No 431
>PF12263 DUF3611:  Protein of unknown function (DUF3611);  InterPro: IPR022051  This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important. 
Probab=28.87  E-value=1e+02  Score=20.32  Aligned_cols=28  Identities=21%  Similarity=0.368  Sum_probs=22.1

Q ss_pred             HHHHHHHHhcCCCCCCCCChHHHHHHhc
Q 043384           77 RCIHIGLLCVQQHPEDRPCMPSVILMLG  104 (149)
Q Consensus        77 ~~~~l~~~cl~~~p~~Rps~~~vl~~l~  104 (149)
                      ....++++.-..+|+.||+-.|+.+.|+
T Consensus        78 ry~Rlar~L~~~~~~~~P~k~~~~~~l~  105 (183)
T PF12263_consen   78 RYTRLARRLRSPNPAKRPSKADVVRLLR  105 (183)
T ss_pred             HHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            4556777777679999999999998655


No 432
>PF15361 RIC3:  Resistance to inhibitors of cholinesterase homologue 3
Probab=25.13  E-value=45  Score=21.16  Aligned_cols=13  Identities=15%  Similarity=0.703  Sum_probs=10.4

Q ss_pred             chhhhHhHHHHHh
Q 043384           17 VFSFGVLLLEIVS   29 (149)
Q Consensus        17 v~s~g~~l~e~~~   29 (149)
                      +|.+||++|-+.+
T Consensus        88 lYtiGI~~f~lY~  100 (152)
T PF15361_consen   88 LYTIGIVLFILYT  100 (152)
T ss_pred             HHHHHHHHHHHHH
Confidence            6999998887654


No 433
>PF00250 Fork_head:  Fork head domain;  InterPro: IPR001766 The fork head protein of Drosophila melanogaster, a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors []. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [, , ]. The fork head domain binds B-DNA as a monomer [], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2UZK_A 2K86_A 1JXS_A 2C6Y_A 2A3S_A 2D2W_A 2KIU_A 1VTN_C 2A07_J 2AS5_F ....
Probab=23.92  E-value=58  Score=18.81  Aligned_cols=27  Identities=7%  Similarity=0.218  Sum_probs=20.8

Q ss_pred             HHHHhcCCCCCCCCChHHHHHHhccCC
Q 043384           81 IGLLCVQQHPEDRPCMPSVILMLGSET  107 (149)
Q Consensus        81 l~~~cl~~~p~~Rps~~~vl~~l~~~~  107 (149)
                      |+...+.-.|+++.+..||.+.+....
T Consensus         9 LI~~Ai~~sp~~~Ltl~eIy~~i~~~~   35 (96)
T PF00250_consen    9 LIAMAILSSPDKRLTLSEIYEWIEENF   35 (96)
T ss_dssp             HHHHHHHTSTTSEBEHHHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCccHHHHHHHHHHhh
Confidence            444566668999999999999886544


No 434
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=21.75  E-value=71  Score=13.62  Aligned_cols=11  Identities=18%  Similarity=0.220  Sum_probs=8.8

Q ss_pred             CCCCChHHHHH
Q 043384           91 EDRPCMPSVIL  101 (149)
Q Consensus        91 ~~Rps~~~vl~  101 (149)
                      ..||+..++.+
T Consensus         8 ~~RP~~eeLv~   18 (26)
T smart00707        8 SQRPTREELEE   18 (26)
T ss_pred             HcCCCHHHHHH
Confidence            47899888875


No 435
>PF02755 RPEL:  RPEL repeat;  InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains. The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.
Probab=20.48  E-value=72  Score=13.53  Aligned_cols=10  Identities=20%  Similarity=0.428  Sum_probs=5.4

Q ss_pred             CCCChHHHHH
Q 043384           92 DRPCMPSVIL  101 (149)
Q Consensus        92 ~Rps~~~vl~  101 (149)
                      .||+..++.+
T Consensus         9 ~RP~~~eLv~   18 (26)
T PF02755_consen    9 QRPTREELVE   18 (26)
T ss_dssp             T---HHHHHH
T ss_pred             cCCCHHHHHH
Confidence            7888888875


Done!