Query 043388
Match_columns 854
No_of_seqs 924 out of 5866
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 07:23:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043388.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043388hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.4E-59 4.7E-64 564.7 31.0 460 2-486 233-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.1E-54 7.2E-59 519.6 30.2 454 2-467 161-715 (768)
3 3t6q_A CD180 antigen; protein- 100.0 4.6E-52 1.6E-56 488.4 33.1 455 1-473 42-564 (606)
4 3omv_A RAF proto-oncogene seri 100.0 1.2E-52 4.1E-57 439.6 20.2 261 548-849 36-302 (307)
5 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-53 5.7E-58 446.6 12.9 264 548-848 13-290 (299)
6 4aoj_A High affinity nerve gro 100.0 7.1E-53 2.4E-57 448.1 17.4 264 548-848 41-320 (329)
7 1ziw_A TOLL-like receptor 3; i 100.0 6.2E-51 2.1E-55 485.4 31.9 472 1-474 34-627 (680)
8 4gt4_A Tyrosine-protein kinase 100.0 1.2E-51 4.2E-56 434.4 20.5 261 548-845 26-304 (308)
9 4g3f_A NF-kappa-beta-inducing 100.0 2.3E-51 8E-56 433.7 20.7 258 547-849 57-318 (336)
10 4fih_A Serine/threonine-protei 100.0 2.1E-51 7.3E-56 435.2 20.3 249 548-840 74-323 (346)
11 3j0a_A TOLL-like receptor 5; m 100.0 3.6E-50 1.2E-54 487.9 33.0 444 1-473 33-564 (844)
12 3t6q_A CD180 antigen; protein- 100.0 1.8E-50 6.3E-55 474.8 29.5 430 1-452 66-566 (606)
13 3fpq_A Serine/threonine-protei 100.0 6E-51 2E-55 423.7 20.5 251 550-840 28-282 (290)
14 4b9d_A Serine/threonine-protei 100.0 2.5E-51 8.6E-56 435.4 16.1 251 547-840 23-276 (350)
15 3vq2_A TLR4, TOLL-like recepto 100.0 9.3E-50 3.2E-54 468.8 28.1 444 1-474 41-563 (606)
16 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.8E-51 2.3E-55 424.8 16.3 248 548-839 32-283 (311)
17 3hmm_A TGF-beta receptor type- 100.0 2.9E-50 9.8E-55 425.6 20.2 273 548-848 3-298 (303)
18 4fie_A Serine/threonine-protei 100.0 3.7E-50 1.3E-54 436.3 20.7 249 548-840 151-400 (423)
19 1ziw_A TOLL-like receptor 3; i 100.0 9.2E-49 3.1E-53 466.7 33.8 431 1-451 58-627 (680)
20 3hyh_A Carbon catabolite-derep 100.0 8E-50 2.7E-54 411.3 18.7 246 547-840 12-262 (275)
21 4ase_A Vascular endothelial gr 100.0 7.6E-50 2.6E-54 428.1 17.5 268 547-849 63-349 (353)
22 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-48 4.2E-53 459.3 26.5 427 1-453 65-565 (606)
23 4g31_A Eukaryotic translation 100.0 9.3E-49 3.2E-53 411.5 19.2 258 547-840 4-279 (299)
24 3ubd_A Ribosomal protein S6 ki 100.0 1.7E-49 5.9E-54 414.5 13.2 242 548-835 24-271 (304)
25 3j0a_A TOLL-like receptor 5; m 100.0 4.3E-48 1.5E-52 469.7 26.4 425 2-453 58-567 (844)
26 2z63_A TOLL-like receptor 4, v 100.0 1.2E-47 4E-52 447.8 26.2 419 17-453 29-538 (570)
27 4eco_A Uncharacterized protein 100.0 2.4E-47 8.3E-52 447.6 25.3 347 49-449 192-603 (636)
28 2z63_A TOLL-like receptor 4, v 100.0 1.3E-46 4.5E-51 438.9 26.3 431 17-473 8-535 (570)
29 4b99_A Mitogen-activated prote 100.0 8.3E-47 2.8E-51 412.0 18.1 282 548-840 54-344 (398)
30 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-46 3.7E-51 437.4 19.5 420 2-451 15-515 (549)
31 4eco_A Uncharacterized protein 100.0 9.9E-47 3.4E-51 442.4 19.3 417 16-472 81-603 (636)
32 4ecn_A Leucine-rich repeat pro 100.0 3.9E-46 1.3E-50 443.5 24.0 395 1-450 332-844 (876)
33 4ecn_A Leucine-rich repeat pro 100.0 1.2E-45 4.1E-50 439.3 20.8 412 16-469 323-840 (876)
34 4f9c_A Cell division cycle 7-r 100.0 1E-45 3.6E-50 399.2 15.2 202 546-766 19-252 (361)
35 2z7x_B TOLL-like receptor 1, v 100.0 5.1E-46 1.7E-50 428.4 12.7 425 1-451 9-486 (520)
36 3v5w_A G-protein coupled recep 100.0 1.5E-44 5.3E-49 409.1 21.2 249 547-840 188-449 (689)
37 2z7x_B TOLL-like receptor 1, v 100.0 1.5E-44 5.2E-49 416.1 19.4 413 19-472 3-484 (520)
38 2z81_A CD282 antigen, TOLL-lik 100.0 6.2E-45 2.1E-49 422.6 15.2 425 16-473 5-514 (549)
39 4g8a_A TOLL-like receptor 4; l 100.0 1.7E-43 6E-48 418.4 27.9 166 7-191 45-214 (635)
40 3uto_A Twitchin; kinase, muscl 100.0 7.6E-44 2.6E-48 408.4 20.5 252 547-840 156-410 (573)
41 3v47_A TOLL-like receptor 5B a 100.0 2.6E-42 9E-47 390.6 30.6 375 16-453 30-415 (455)
42 3s95_A LIMK-1, LIM domain kina 100.0 1.1E-42 3.8E-47 372.2 21.5 266 547-851 9-286 (310)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-42 4.1E-47 403.6 21.0 395 17-453 32-517 (562)
44 3fxz_A Serine/threonine-protei 100.0 2.9E-42 9.8E-47 366.0 21.6 250 547-840 19-269 (297)
45 2qkw_B Protein kinase; three-h 100.0 6.9E-43 2.4E-47 375.7 16.2 281 542-848 33-316 (321)
46 3ugc_A Tyrosine-protein kinase 100.0 1.8E-42 6.3E-47 367.8 17.1 281 547-850 9-294 (295)
47 3uim_A Brassinosteroid insensi 100.0 1.7E-42 5.7E-47 373.8 16.5 288 534-845 16-309 (326)
48 3kul_A Ephrin type-A receptor 100.0 3.9E-42 1.3E-46 369.8 17.5 263 548-851 49-317 (325)
49 2c30_A Serine/threonine-protei 100.0 2.8E-41 9.5E-46 362.5 23.6 263 535-841 22-295 (321)
50 3fe3_A MAP/microtubule affinit 100.0 1E-41 3.5E-46 365.9 18.8 248 547-841 14-265 (328)
51 3soc_A Activin receptor type-2 100.0 9.1E-42 3.1E-46 366.8 18.3 282 547-848 23-319 (322)
52 3zgw_A Maternal embryonic leuc 100.0 1.3E-41 4.4E-46 367.0 18.3 250 547-841 9-261 (347)
53 3q4u_A Activin receptor type-1 100.0 2.8E-41 9.6E-46 359.9 20.7 266 547-845 7-300 (301)
54 4g8a_A TOLL-like receptor 4; l 100.0 6.6E-41 2.3E-45 396.2 25.9 433 7-473 19-584 (635)
55 3p86_A Serine/threonine-protei 100.0 2.7E-41 9.1E-46 360.3 20.1 260 547-849 36-300 (309)
56 2psq_A Fibroblast growth facto 100.0 5.5E-41 1.9E-45 367.2 22.9 266 547-849 80-366 (370)
57 2qol_A Ephrin receptor; recept 100.0 1.2E-41 4E-46 372.7 16.1 261 548-849 45-311 (373)
58 2nru_A Interleukin-1 receptor- 100.0 1.5E-40 5E-45 355.4 23.9 283 534-847 11-306 (307)
59 3tki_A Serine/threonine-protei 100.0 3E-41 1E-45 362.3 18.6 254 547-841 6-262 (323)
60 2yab_A Death-associated protei 100.0 7.6E-41 2.6E-45 363.4 21.8 251 547-840 11-272 (361)
61 4eqm_A Protein kinase; transfe 100.0 5.7E-41 1.9E-45 355.6 19.8 261 548-848 11-276 (294)
62 1o6l_A RAC-beta serine/threoni 100.0 9.7E-41 3.3E-45 359.2 21.6 249 547-841 4-261 (337)
63 3cbl_A C-FES, proto-oncogene t 100.0 1.3E-41 4.5E-46 373.5 15.0 261 547-849 113-376 (377)
64 3lb7_A RAF proto-oncogene seri 100.0 8.6E-41 2.9E-45 356.3 19.8 263 547-850 35-303 (307)
65 2y0a_A Death-associated protei 100.0 2.1E-40 7.3E-45 356.4 22.6 251 547-840 10-271 (326)
66 1jl5_A Outer protein YOPM; leu 100.0 2E-40 6.8E-45 371.7 23.3 375 9-451 5-416 (454)
67 4hcu_A Tyrosine-protein kinase 100.0 9.8E-41 3.3E-45 349.4 19.2 256 548-848 10-267 (269)
68 2izr_A Casein kinase I isoform 100.0 1.6E-40 5.3E-45 358.7 21.2 264 548-849 9-283 (330)
69 4euu_A Serine/threonine-protei 100.0 1.1E-40 3.7E-45 358.3 19.7 283 548-846 9-308 (319)
70 1tki_A Titin; serine kinase, m 100.0 7.4E-41 2.5E-45 358.8 18.2 252 547-841 4-258 (321)
71 3vhe_A Vascular endothelial gr 100.0 4.5E-41 1.5E-45 367.9 16.9 276 539-849 13-357 (359)
72 4f0f_A Serine/threonine-protei 100.0 2E-40 6.8E-45 350.7 21.2 251 548-845 19-287 (287)
73 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-40 3.8E-45 348.7 18.5 258 547-849 7-266 (268)
74 3v47_A TOLL-like receptor 5B a 100.0 4.2E-40 1.4E-44 372.5 24.4 381 18-473 12-412 (455)
75 3c0i_A Peripheral plasma membr 100.0 1.2E-40 4E-45 362.2 18.6 255 547-840 23-286 (351)
76 3soa_A Calcium/calmodulin-depe 100.0 4.8E-40 1.6E-44 366.5 23.9 254 545-840 8-267 (444)
77 3niz_A Rhodanese family protei 100.0 2.1E-40 7.3E-45 354.0 20.3 274 547-840 20-300 (311)
78 4fr4_A YANK1, serine/threonine 100.0 4.1E-40 1.4E-44 359.4 22.6 250 547-840 14-271 (384)
79 3l9p_A Anaplastic lymphoma kin 100.0 8.8E-41 3E-45 365.3 17.2 266 547-849 70-347 (367)
80 2bdw_A Hypothetical protein K1 100.0 3.1E-40 1.1E-44 359.8 21.3 253 546-841 27-285 (362)
81 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-40 4.4E-45 357.8 18.0 247 547-841 8-259 (336)
82 1csn_A Casein kinase-1; phosph 100.0 3.4E-40 1.2E-44 351.0 21.0 264 548-850 10-286 (298)
83 3op5_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 361.6 20.8 275 547-849 34-331 (364)
84 3txo_A PKC-L, NPKC-ETA, protei 100.0 6.6E-41 2.3E-45 363.0 15.4 249 546-840 21-280 (353)
85 4dc2_A Protein kinase C IOTA t 100.0 5.2E-40 1.8E-44 359.8 22.6 248 547-835 51-307 (396)
86 3poz_A Epidermal growth factor 100.0 1.6E-40 5.4E-45 357.9 18.1 259 547-848 14-279 (327)
87 2zv2_A Calcium/calmodulin-depe 100.0 2.9E-40 9.9E-45 351.3 19.7 251 547-840 12-292 (298)
88 3qd2_B Eukaryotic translation 100.0 3.9E-40 1.3E-44 356.4 21.0 259 546-840 4-325 (332)
89 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6E-40 2.1E-44 380.9 24.0 401 1-427 40-515 (562)
90 3ork_A Serine/threonine protei 100.0 3.5E-41 1.2E-45 360.6 12.5 263 548-845 12-279 (311)
91 1fot_A TPK1 delta, CAMP-depend 100.0 4.4E-40 1.5E-44 351.6 20.7 245 547-840 5-258 (318)
92 2eva_A TAK1 kinase - TAB1 chim 100.0 5.8E-40 2E-44 350.2 21.3 258 547-850 7-266 (307)
93 1o6v_A Internalin A; bacterial 100.0 2.7E-39 9.2E-44 366.1 28.0 356 3-448 35-390 (466)
94 2pmi_A Negative RE, cyclin-dep 100.0 2.1E-40 7.1E-45 355.3 17.8 281 547-840 4-293 (317)
95 4aw2_A Serine/threonine-protei 100.0 7.6E-41 2.6E-45 371.3 14.8 263 540-841 66-339 (437)
96 4e5w_A Tyrosine-protein kinase 100.0 2E-40 6.9E-45 353.4 17.5 275 548-846 21-301 (302)
97 2w4o_A Calcium/calmodulin-depe 100.0 1.9E-40 6.4E-45 360.1 17.4 250 547-840 52-305 (349)
98 3uc3_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 358.8 20.3 253 547-841 19-275 (361)
99 3lxl_A Tyrosine-protein kinase 100.0 1.1E-40 3.9E-45 359.4 15.5 278 548-849 23-305 (327)
100 1xjd_A Protein kinase C, theta 100.0 1.8E-40 6.2E-45 358.0 16.9 250 544-839 13-268 (345)
101 3gen_A Tyrosine-protein kinase 100.0 5.8E-40 2E-44 346.3 20.4 257 547-848 23-281 (283)
102 3o0g_A Cell division protein k 100.0 1.6E-40 5.6E-45 352.1 16.1 273 548-840 2-282 (292)
103 3qup_A Tyrosine-protein kinase 100.0 1.9E-40 6.6E-45 357.1 16.2 271 547-849 22-300 (323)
104 1kob_A Twitchin; kinase, intra 100.0 7.1E-40 2.4E-44 359.0 20.7 253 547-841 50-305 (387)
105 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-39 4E-44 366.2 23.0 254 547-849 192-447 (450)
106 3gni_B Strad alpha; kinase fol 100.0 5E-40 1.7E-44 363.3 19.7 282 547-841 24-334 (389)
107 1opk_A P150, C-ABL, proto-onco 100.0 3.5E-40 1.2E-44 374.6 18.9 258 547-847 219-478 (495)
108 1luf_A Muscle-specific tyrosin 100.0 3.1E-40 1.1E-44 358.9 17.6 269 546-851 45-339 (343)
109 2w1i_A JAK2; chromosomal rearr 100.0 3.5E-40 1.2E-44 355.3 17.7 282 547-851 40-326 (326)
110 3kmu_A ILK, integrin-linked ki 100.0 2.9E-40 9.8E-45 346.3 16.5 254 547-847 9-270 (271)
111 4fvq_A Tyrosine-protein kinase 100.0 9.5E-41 3.3E-45 353.5 13.0 253 547-848 7-276 (289)
112 3g33_A Cell division protein k 100.0 3.3E-40 1.1E-44 352.7 17.2 278 546-840 7-296 (308)
113 3kex_A Receptor tyrosine-prote 100.0 4.1E-40 1.4E-44 354.5 17.9 258 548-848 13-277 (325)
114 2ivs_A Proto-oncogene tyrosine 100.0 8.3E-40 2.8E-44 350.8 20.1 265 547-848 22-312 (314)
115 1mp8_A Focal adhesion kinase 1 100.0 5.7E-40 2E-44 345.8 18.5 259 547-849 14-278 (281)
116 1rjb_A FL cytokine receptor; k 100.0 5.6E-40 1.9E-44 356.9 18.9 268 547-850 44-337 (344)
117 3a8x_A Protein kinase C IOTA t 100.0 1.1E-39 3.7E-44 352.8 21.0 248 547-835 8-264 (345)
118 3tt0_A Basic fibroblast growth 100.0 1.3E-39 4.5E-44 358.5 22.0 267 547-850 68-355 (382)
119 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.9E-40 2.4E-44 354.8 19.4 245 547-840 40-293 (350)
120 3rp9_A Mitogen-activated prote 100.0 4.3E-40 1.5E-44 371.8 18.5 200 548-757 53-280 (458)
121 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-39 4.6E-44 342.3 21.0 251 546-840 7-261 (277)
122 2id5_A Lingo-1, leucine rich r 100.0 2E-39 6.9E-44 369.0 24.1 350 18-475 13-362 (477)
123 2x4f_A Myosin light chain kina 100.0 8.6E-40 2.9E-44 357.6 20.2 248 551-840 92-342 (373)
124 3dtc_A Mitogen-activated prote 100.0 5.1E-40 1.8E-44 344.4 17.6 253 547-845 6-271 (271)
125 3og7_A AKAP9-BRAF fusion prote 100.0 4.7E-40 1.6E-44 348.0 17.2 259 547-847 23-288 (289)
126 4eut_A Serine/threonine-protei 100.0 2.5E-40 8.4E-45 366.0 15.7 285 548-848 9-310 (396)
127 3mdy_A Bone morphogenetic prot 100.0 3.4E-39 1.2E-43 349.8 24.3 276 544-849 33-333 (337)
128 2qr7_A Ribosomal protein S6 ki 100.0 8.6E-40 3E-44 353.1 19.5 253 546-841 20-278 (342)
129 4hgt_A Casein kinase I isoform 100.0 1.3E-39 4.5E-44 346.1 20.5 266 546-849 7-282 (296)
130 3kn6_A Ribosomal protein S6 ki 100.0 5.7E-40 1.9E-44 352.7 17.6 253 548-840 8-270 (325)
131 2i0e_A Protein kinase C-beta I 100.0 8.8E-40 3E-44 353.9 19.0 249 546-840 18-276 (353)
132 1t46_A HOMO sapiens V-KIT hard 100.0 8.8E-40 3E-44 350.4 18.9 267 547-849 22-309 (313)
133 3brb_A Proto-oncogene tyrosine 100.0 1.1E-39 3.6E-44 349.7 19.4 272 546-849 32-310 (313)
134 3kfa_A Tyrosine-protein kinase 100.0 9.6E-40 3.3E-44 345.6 18.8 259 547-848 12-272 (288)
135 1qcf_A Haematopoetic cell kina 100.0 2.3E-40 8E-45 372.6 14.8 258 547-849 187-446 (454)
136 2a2a_A Death-associated protei 100.0 4E-39 1.4E-43 346.2 23.7 251 547-840 11-272 (321)
137 3uzp_A CKI-delta, CKID, casein 100.0 2.6E-39 9E-44 343.7 21.9 266 547-850 8-283 (296)
138 1ob3_A PFPK5, cell division co 100.0 3.1E-40 1.1E-44 349.2 14.5 267 548-840 2-280 (288)
139 3v8s_A RHO-associated protein 100.0 3.3E-40 1.1E-44 363.5 15.2 259 541-841 62-330 (410)
140 2yex_A Serine/threonine-protei 100.0 2.8E-39 9.6E-44 339.8 21.5 254 546-840 5-261 (276)
141 3oz6_A Mitogen-activated prote 100.0 7.4E-40 2.5E-44 361.6 17.9 282 545-841 6-329 (388)
142 1xbb_A Tyrosine-protein kinase 100.0 9.3E-40 3.2E-44 346.1 17.8 262 547-851 15-283 (291)
143 3dbq_A Dual specificity protei 100.0 9.9E-40 3.4E-44 354.2 18.4 251 548-841 9-274 (343)
144 3n9x_A Phosphotransferase; mal 100.0 9.9E-40 3.4E-44 365.1 18.9 206 547-762 25-253 (432)
145 3g2f_A Bone morphogenetic prot 100.0 2.3E-40 7.7E-45 358.8 13.2 289 547-852 12-323 (336)
146 3p1a_A MYT1 kinase, membrane-a 100.0 2.2E-39 7.5E-44 346.4 20.5 244 548-840 57-304 (311)
147 1mqb_A Ephrin type-A receptor 100.0 1E-39 3.6E-44 352.3 18.1 262 548-850 44-312 (333)
148 2wqm_A Serine/threonine-protei 100.0 1.9E-39 6.5E-44 347.2 20.0 266 547-850 31-300 (310)
149 2v62_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 356.9 15.6 271 548-847 37-328 (345)
150 3f66_A Hepatocyte growth facto 100.0 1.5E-39 5E-44 346.0 19.0 265 548-852 25-296 (298)
151 1u59_A Tyrosine-protein kinase 100.0 2.6E-39 8.8E-44 342.0 20.7 262 548-851 9-276 (287)
152 3fdn_A Serine/threonine-protei 100.0 1.3E-39 4.6E-44 342.7 18.4 248 546-841 7-258 (279)
153 2ac3_A MAP kinase-interacting 100.0 2.6E-39 8.8E-44 347.2 20.8 270 548-841 12-296 (316)
154 3hko_A Calcium/calmodulin-depe 100.0 2.5E-39 8.7E-44 351.9 20.9 266 543-841 21-331 (345)
155 3lxp_A Non-receptor tyrosine-p 100.0 5.2E-40 1.8E-44 352.5 15.3 277 549-851 32-314 (318)
156 3pls_A Macrophage-stimulating 100.0 2.4E-39 8.1E-44 344.5 20.2 266 549-853 22-293 (298)
157 3ttj_A Mitogen-activated prote 100.0 1.1E-39 3.8E-44 366.7 18.5 277 547-841 61-356 (464)
158 3c1x_A Hepatocyte growth facto 100.0 7.8E-40 2.7E-44 357.7 16.7 265 548-852 89-360 (373)
159 2y94_A 5'-AMP-activated protei 100.0 1.7E-39 5.9E-44 364.1 19.9 247 547-840 15-266 (476)
160 3qyz_A Mitogen-activated prote 100.0 1.8E-39 6.3E-44 355.2 19.6 282 547-840 26-313 (364)
161 3i6u_A CDS1, serine/threonine- 100.0 1.4E-39 4.8E-44 362.0 19.0 253 546-841 133-400 (419)
162 3cc6_A Protein tyrosine kinase 100.0 1.7E-39 5.8E-44 342.3 18.5 258 547-848 11-274 (281)
163 4agu_A Cyclin-dependent kinase 100.0 5.1E-40 1.7E-44 351.9 14.5 277 547-841 2-285 (311)
164 1u5q_A Serine/threonine protei 100.0 1.7E-39 5.7E-44 352.0 18.7 247 547-841 53-306 (348)
165 2vd5_A DMPK protein; serine/th 100.0 5.9E-40 2E-44 361.7 15.3 261 540-840 53-327 (412)
166 1b6c_B TGF-B superfamily recep 100.0 7.4E-39 2.5E-43 347.8 23.7 275 542-849 36-338 (342)
167 3t9t_A Tyrosine-protein kinase 100.0 2.2E-39 7.5E-44 338.8 18.7 256 548-848 8-265 (267)
168 2i1m_A Macrophage colony-stimu 100.0 1.3E-39 4.6E-44 352.2 17.5 270 547-852 45-331 (333)
169 1t4h_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 341.1 20.8 250 549-840 27-282 (290)
170 1nxk_A MAP kinase-activated pr 100.0 3.4E-39 1.2E-43 356.4 20.9 254 547-841 60-322 (400)
171 3lzb_A Epidermal growth factor 100.0 1.2E-39 4.1E-44 350.7 16.9 258 548-848 15-279 (327)
172 3dls_A PAS domain-containing s 100.0 1.1E-39 3.9E-44 351.8 16.7 244 545-841 21-275 (335)
173 2h34_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 346.1 18.7 262 546-849 32-298 (309)
174 3kk8_A Calcium/calmodulin depe 100.0 5.1E-39 1.8E-43 339.3 21.3 252 547-841 5-262 (284)
175 2zmd_A Dual specificity protei 100.0 2.1E-39 7.2E-44 357.0 19.1 251 548-841 56-321 (390)
176 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.8E-40 1.6E-44 354.5 13.5 277 543-840 29-318 (329)
177 3gxj_A TGF-beta receptor type- 100.0 3.8E-41 1.3E-45 359.3 4.6 269 548-849 3-299 (303)
178 2buj_A Serine/threonine-protei 100.0 8.1E-40 2.8E-44 351.3 14.9 271 547-849 28-308 (317)
179 3is5_A Calcium-dependent prote 100.0 2.9E-39 1E-43 341.0 18.9 253 547-840 21-278 (285)
180 2eue_A Carbon catabolite derep 100.0 2E-39 7E-44 340.5 17.6 246 548-841 13-263 (275)
181 3cok_A Serine/threonine-protei 100.0 2.4E-39 8.2E-44 340.6 18.1 250 546-840 9-262 (278)
182 1jl5_A Outer protein YOPM; leu 100.0 5.6E-39 1.9E-43 360.0 22.2 376 1-451 20-434 (454)
183 2r5t_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 355.0 16.6 250 547-842 37-291 (373)
184 1qpc_A LCK kinase; alpha beta 100.0 3.5E-39 1.2E-43 339.5 19.0 259 548-851 13-273 (279)
185 3llt_A Serine/threonine kinase 100.0 6E-40 2E-44 359.0 13.5 207 538-764 25-262 (360)
186 3a62_A Ribosomal protein S6 ki 100.0 3.2E-39 1.1E-43 347.4 19.0 248 547-840 16-276 (327)
187 2ozo_A Tyrosine-protein kinase 100.0 3.6E-39 1.2E-43 374.9 20.8 260 549-850 336-601 (613)
188 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-38 3.7E-43 357.9 23.7 351 4-452 30-393 (457)
189 2pvf_A Fibroblast growth facto 100.0 4E-39 1.4E-43 348.4 19.5 266 547-849 34-320 (334)
190 2xir_A Vascular endothelial gr 100.0 2.3E-39 7.9E-44 347.7 17.4 274 542-850 21-313 (316)
191 3mtl_A Cell division protein k 100.0 5.3E-40 1.8E-44 353.3 12.3 274 548-840 2-281 (324)
192 3bhy_A Death-associated protei 100.0 7.2E-39 2.4E-43 338.0 20.5 257 547-846 4-273 (283)
193 2acx_A G protein-coupled recep 100.0 4.3E-39 1.5E-43 365.1 20.0 251 547-840 183-444 (576)
194 4ejn_A RAC-alpha serine/threon 100.0 1.2E-39 4.2E-44 366.3 15.5 248 547-840 147-404 (446)
195 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-39 7.8E-44 364.1 17.5 258 547-849 183-442 (452)
196 4fl3_A Tyrosine-protein kinase 100.0 3.3E-39 1.1E-43 375.9 19.4 253 554-849 375-633 (635)
197 2a19_B Interferon-induced, dou 100.0 5.9E-39 2E-43 338.8 19.5 257 546-850 9-277 (284)
198 2jam_A Calcium/calmodulin-depe 100.0 8.7E-39 3E-43 340.9 20.6 251 546-840 7-261 (304)
199 1cm8_A Phosphorylated MAP kina 100.0 3.8E-39 1.3E-43 352.1 17.6 275 548-840 25-307 (367)
200 1u46_A ACK-1, activated CDC42 100.0 3E-39 1E-43 342.4 16.0 263 547-850 17-287 (291)
201 2y7j_A Phosphorylase B kinase 100.0 2.6E-38 9E-43 345.4 23.9 258 540-840 86-359 (365)
202 2vgo_A Serine/threonine-protei 100.0 9.4E-39 3.2E-43 337.2 19.7 246 547-840 13-262 (284)
203 3ll6_A Cyclin G-associated kin 100.0 5.7E-39 2E-43 348.0 18.4 264 548-849 28-310 (337)
204 2jii_A Serine/threonine-protei 100.0 2.1E-39 7.3E-44 353.1 14.7 268 548-850 42-339 (352)
205 1byg_A CSK, protein (C-termina 100.0 5.8E-39 2E-43 337.6 17.3 254 547-849 20-275 (278)
206 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.1E-39 1.4E-43 352.7 16.7 257 547-849 64-341 (365)
207 3mi9_A Cell division protein k 100.0 1.5E-38 5.2E-43 346.4 20.9 285 547-841 16-312 (351)
208 2rku_A Serine/threonine-protei 100.0 7.6E-39 2.6E-43 339.7 18.1 249 547-841 14-266 (294)
209 1ua2_A CAK, cell division prot 100.0 2.4E-39 8.3E-44 351.6 14.5 277 544-841 6-292 (346)
210 2clq_A Mitogen-activated prote 100.0 1.2E-38 4.2E-43 338.4 19.6 252 549-840 23-278 (295)
211 4aaa_A Cyclin-dependent kinase 100.0 1.7E-39 5.8E-44 350.8 13.0 277 547-841 24-307 (331)
212 3eqc_A Dual specificity mitoge 100.0 4E-39 1.4E-43 352.3 16.2 199 548-764 33-233 (360)
213 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.9E-38 6.4E-43 359.4 21.9 251 547-835 184-438 (543)
214 1fvr_A Tyrosine-protein kinase 100.0 6.8E-39 2.3E-43 345.5 17.3 263 547-849 24-302 (327)
215 3sv0_A Casein kinase I-like; t 100.0 2.8E-38 9.7E-43 354.9 23.0 263 548-849 7-280 (483)
216 2owb_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 346.1 17.5 249 547-841 40-292 (335)
217 2i6l_A Mitogen-activated prote 100.0 4.5E-39 1.6E-43 346.1 15.7 278 548-840 11-305 (320)
218 3nsz_A CK II alpha, casein kin 100.0 4.4E-39 1.5E-43 347.7 15.7 271 548-840 36-319 (330)
219 1x8b_A WEE1HU, WEE1-like prote 100.0 2.6E-38 8.8E-43 334.8 21.2 248 546-841 9-280 (289)
220 3a7i_A MST3 kinase, serine/thr 100.0 2.7E-38 9.1E-43 337.1 21.2 248 548-841 22-271 (303)
221 3mwu_A Calmodulin-domain prote 100.0 3.1E-38 1.1E-42 359.0 22.8 252 546-841 20-277 (486)
222 3lij_A Calcium/calmodulin depe 100.0 2.5E-38 8.7E-43 360.3 21.9 251 547-841 36-292 (494)
223 2yfx_A Tyrosine-protein kinase 100.0 9.9E-39 3.4E-43 344.3 17.5 265 547-848 29-305 (327)
224 2j7t_A Serine/threonine-protei 100.0 6.9E-39 2.4E-43 341.5 15.9 252 547-840 18-275 (302)
225 1p4o_A Insulin-like growth fac 100.0 7.1E-39 2.4E-43 344.8 15.8 268 544-848 21-300 (322)
226 3com_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 337.7 21.4 251 546-840 27-278 (314)
227 2id5_A Lingo-1, leucine rich r 100.0 3.1E-38 1E-42 359.2 21.7 314 3-344 22-335 (477)
228 2ycf_A Serine/threonine-protei 100.0 1.6E-38 5.6E-43 341.7 18.5 252 546-840 8-274 (322)
229 3lm5_A Serine/threonine-protei 100.0 1.9E-38 6.5E-43 341.7 19.0 259 542-841 22-288 (327)
230 3q5i_A Protein kinase; CDPK, m 100.0 2.5E-38 8.6E-43 361.3 21.0 251 547-841 35-302 (504)
231 3eb0_A Putative uncharacterize 100.0 5.3E-39 1.8E-43 353.9 14.7 280 545-840 4-321 (383)
232 2r3i_A Cell division protein k 100.0 9.7E-39 3.3E-43 339.9 16.2 274 547-840 2-283 (299)
233 2h6d_A 5'-AMP-activated protei 100.0 2.3E-38 8E-43 332.7 18.9 248 547-841 10-262 (276)
234 2w5a_A Serine/threonine-protei 100.0 5.3E-39 1.8E-43 338.3 13.9 259 547-844 5-271 (279)
235 2x7f_A TRAF2 and NCK-interacti 100.0 6.3E-39 2.1E-43 345.9 14.6 262 541-840 17-286 (326)
236 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-38 6.2E-43 346.4 17.8 282 547-840 10-305 (353)
237 2fst_X Mitogen-activated prote 100.0 6E-39 2E-43 350.1 13.8 276 548-841 29-312 (367)
238 2h8h_A Proto-oncogene tyrosine 100.0 7.8E-39 2.7E-43 366.9 15.3 258 547-849 266-525 (535)
239 3kvw_A DYRK2, dual specificity 100.0 3.5E-38 1.2E-42 351.7 20.2 197 548-764 97-302 (429)
240 2xrw_A Mitogen-activated prote 100.0 2.5E-38 8.4E-43 346.9 18.5 278 547-841 24-319 (371)
241 1o6v_A Internalin A; bacterial 100.0 3.5E-37 1.2E-41 348.8 28.4 335 2-424 56-390 (466)
242 3nyv_A Calmodulin-domain prote 100.0 1.8E-38 6.2E-43 361.2 17.7 251 547-841 25-282 (484)
243 3fme_A Dual specificity mitoge 100.0 1.9E-38 6.4E-43 336.1 16.4 254 547-840 6-266 (290)
244 3byv_A Rhoptry kinase; malaria 100.0 2E-39 6.7E-44 356.6 9.0 257 547-847 72-368 (377)
245 1vzo_A Ribosomal protein S6 ki 100.0 2E-38 6.9E-43 345.2 16.8 254 547-841 53-322 (355)
246 3q60_A ROP5B; pseudokinase, tr 100.0 9.3E-39 3.2E-43 350.6 13.6 257 548-840 62-352 (371)
247 3pfq_A PKC-B, PKC-beta, protei 100.0 4.5E-38 1.5E-42 368.9 20.3 249 546-840 339-597 (674)
248 3rgf_A Cyclin-dependent kinase 100.0 5.5E-38 1.9E-42 348.6 19.3 209 547-764 19-239 (405)
249 3pg1_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 344.7 17.8 288 539-841 13-317 (362)
250 1phk_A Phosphorylase kinase; g 100.0 1.2E-37 4.2E-42 331.2 20.9 252 546-840 15-283 (298)
251 1j1b_A Glycogen synthase kinas 100.0 3.6E-38 1.2E-42 350.8 17.6 276 548-840 54-336 (420)
252 4exu_A Mitogen-activated prote 100.0 3.7E-38 1.3E-42 345.4 17.4 275 548-841 42-324 (371)
253 3e3p_A Protein kinase, putativ 100.0 7.8E-38 2.7E-42 342.3 19.0 289 541-841 16-315 (360)
254 1wak_A Serine/threonine-protei 100.0 7.3E-38 2.5E-42 347.6 19.0 271 548-840 37-391 (397)
255 2vwi_A Serine/threonine-protei 100.0 9.7E-39 3.3E-43 340.6 10.9 267 547-840 14-287 (303)
256 2wtk_C Serine/threonine-protei 100.0 1.6E-37 5.6E-42 331.4 20.0 254 547-841 4-264 (305)
257 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.1E-38 7.1E-43 340.7 13.0 260 547-849 32-304 (319)
258 3an0_A Dual specificity mitoge 100.0 3.3E-38 1.1E-42 342.2 14.6 254 547-840 50-310 (340)
259 3o6n_A APL1; leucine-rich repe 100.0 2.6E-37 8.8E-42 341.8 21.8 264 39-342 44-308 (390)
260 2wei_A Calmodulin-domain prote 100.0 2.8E-37 9.6E-42 326.3 20.3 252 545-840 19-276 (287)
261 3cek_A Dual specificity protei 100.0 1.7E-37 5.8E-42 332.4 18.7 253 546-841 26-293 (313)
262 1z57_A Dual specificity protei 100.0 1.9E-37 6.5E-42 336.3 19.3 272 548-841 14-329 (339)
263 1zy4_A Serine/threonine-protei 100.0 1.9E-37 6.5E-42 330.6 18.7 260 546-841 4-284 (303)
264 4e7w_A Glycogen synthase kinas 100.0 4.5E-38 1.5E-42 347.1 14.2 277 548-841 40-322 (394)
265 1blx_A Cyclin-dependent kinase 100.0 1.3E-37 4.4E-42 335.7 17.3 277 546-840 9-296 (326)
266 2pml_X PFPK7, Ser/Thr protein 100.0 1E-37 3.4E-42 339.7 16.5 264 547-840 30-322 (348)
267 2vx3_A Dual specificity tyrosi 100.0 3.1E-37 1.1E-41 339.7 19.6 200 547-764 53-261 (382)
268 3bz5_A Internalin-J, INLJ; leu 100.0 1.1E-36 3.7E-41 341.7 24.1 333 18-447 20-353 (457)
269 3oja_B Anopheles plasmodium-re 100.0 4.9E-37 1.7E-41 358.3 22.0 339 39-477 50-388 (597)
270 2j0j_A Focal adhesion kinase 1 100.0 2.9E-37 9.9E-42 360.9 19.9 258 547-848 389-652 (656)
271 3fhr_A MAP kinase-activated pr 100.0 2.2E-37 7.4E-42 334.5 16.8 255 547-840 27-287 (336)
272 3coi_A Mitogen-activated prote 100.0 1.7E-37 5.9E-42 338.3 15.8 275 548-841 24-306 (353)
273 3a99_A Proto-oncogene serine/t 100.0 2E-37 6.9E-42 332.6 15.6 240 547-840 42-293 (320)
274 3aln_A Dual specificity mitoge 100.0 4.5E-37 1.5E-41 331.4 15.7 257 548-840 22-285 (327)
275 1q8y_A SR protein kinase; tran 100.0 4.1E-37 1.4E-41 338.4 15.7 276 548-840 19-333 (373)
276 2eu9_A Dual specificity protei 100.0 1.2E-36 4E-41 332.4 19.1 271 548-840 19-333 (355)
277 3uqc_A Probable conserved tran 100.0 9.9E-37 3.4E-41 320.8 17.6 234 548-849 31-267 (286)
278 2iwi_A Serine/threonine-protei 100.0 4.2E-37 1.4E-41 329.3 14.6 243 544-840 27-283 (312)
279 2rio_A Serine/threonine-protei 100.0 8.6E-37 2.9E-41 341.2 16.9 255 549-840 16-295 (434)
280 2dyl_A Dual specificity mitoge 100.0 1.5E-36 5.2E-41 326.0 17.6 252 547-841 24-284 (318)
281 3qa8_A MGC80376 protein; kinas 100.0 1.2E-36 4.1E-41 348.0 16.7 277 546-838 12-295 (676)
282 3p23_A Serine/threonine-protei 100.0 2.6E-36 8.9E-41 336.0 17.7 249 548-840 24-283 (432)
283 2pzi_A Probable serine/threoni 100.0 3.1E-36 1.1E-40 356.2 16.1 246 548-847 80-328 (681)
284 3o6n_A APL1; leucine-rich repe 100.0 1.4E-34 4.6E-39 320.0 24.7 289 14-342 43-331 (390)
285 4fmz_A Internalin; leucine ric 100.0 1.8E-34 6.3E-39 313.8 24.0 298 11-342 39-346 (347)
286 4fmz_A Internalin; leucine ric 100.0 2.2E-34 7.4E-39 313.2 24.2 307 36-446 40-346 (347)
287 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-34 7.1E-39 310.9 23.6 298 7-340 18-331 (332)
288 1xku_A Decorin; proteoglycan, 100.0 5.7E-34 2E-38 307.3 25.8 291 15-340 30-330 (330)
289 3oja_B Anopheles plasmodium-re 100.0 2E-34 7E-39 336.1 23.9 311 14-368 49-359 (597)
290 3dzo_A Rhoptry kinase domain; 100.0 1.8E-35 6.2E-40 328.3 14.0 250 547-840 77-363 (413)
291 3m2w_A MAP kinase-activated pr 100.0 9.6E-35 3.3E-39 308.7 17.8 236 547-841 16-257 (299)
292 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-33 3.7E-38 305.4 21.9 245 40-342 33-277 (332)
293 2vuw_A Serine/threonine-protei 100.0 6E-35 2.1E-39 315.8 7.8 246 547-839 19-329 (336)
294 1ogq_A PGIP-2, polygalacturona 100.0 2E-33 6.8E-38 299.9 17.4 251 40-342 50-305 (313)
295 1xku_A Decorin; proteoglycan, 100.0 2.4E-32 8.2E-37 294.6 25.3 282 2-316 41-330 (330)
296 1ogq_A PGIP-2, polygalacturona 100.0 7E-34 2.4E-38 303.4 12.5 259 178-475 50-310 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 9.6E-36 3.3E-40 337.4 -6.2 364 16-447 3-412 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-35 4.5E-40 336.3 -6.8 384 2-447 13-441 (461)
299 2z80_A TOLL-like receptor 2, v 100.0 4.7E-31 1.6E-35 287.3 13.4 278 14-320 29-316 (353)
300 2z80_A TOLL-like receptor 2, v 100.0 6.3E-31 2.2E-35 286.2 14.4 282 37-346 28-318 (353)
301 3zyj_A Leucine-rich repeat-con 100.0 1.1E-29 3.7E-34 285.1 24.2 247 18-318 45-292 (440)
302 3zyi_A Leucine-rich repeat-con 100.0 1E-29 3.6E-34 286.3 24.2 248 17-318 55-303 (452)
303 2z66_A Variable lymphocyte rec 100.0 7.2E-30 2.4E-34 272.1 19.7 283 18-327 9-296 (306)
304 2z66_A Variable lymphocyte rec 100.0 3.5E-30 1.2E-34 274.6 15.8 249 43-344 10-263 (306)
305 1ozn_A Reticulon 4 receptor; N 100.0 2.6E-29 8.9E-34 264.8 19.2 268 19-339 14-284 (285)
306 3zyj_A Leucine-rich repeat-con 100.0 5.8E-29 2E-33 279.2 22.8 248 42-343 45-293 (440)
307 1ozn_A Reticulon 4 receptor; N 100.0 5.4E-29 1.9E-33 262.3 19.8 256 43-351 14-270 (285)
308 3zyi_A Leucine-rich repeat-con 100.0 7.7E-29 2.6E-33 279.2 22.3 249 41-343 55-304 (452)
309 3g06_A SSPH2 (leucine-rich rep 100.0 2.4E-28 8.2E-33 281.7 25.0 268 16-352 40-307 (622)
310 4fcg_A Uncharacterized protein 100.0 2.6E-28 9E-33 261.8 20.8 236 14-294 79-314 (328)
311 3o53_A Protein LRIM1, AGAP0063 100.0 1E-29 3.6E-34 271.8 7.4 270 16-323 10-281 (317)
312 3o53_A Protein LRIM1, AGAP0063 100.0 6E-30 2.1E-34 273.7 5.3 258 41-362 11-270 (317)
313 3g06_A SSPH2 (leucine-rich rep 100.0 1.5E-27 5E-32 275.1 24.6 268 41-433 41-308 (622)
314 4fcg_A Uncharacterized protein 100.0 3.5E-28 1.2E-32 260.8 17.5 234 64-342 81-314 (328)
315 1wwl_A Monocyte differentiatio 100.0 4E-29 1.4E-33 266.7 8.4 255 35-342 38-309 (312)
316 3ogk_B Coronatine-insensitive 100.0 3.9E-30 1.3E-34 301.1 -0.2 418 5-448 62-528 (592)
317 1wwl_A Monocyte differentiatio 99.9 1.5E-28 5.2E-33 262.2 9.6 254 11-295 38-310 (312)
318 3oja_A Leucine-rich immune mol 99.9 9.6E-28 3.3E-32 271.5 13.1 234 41-313 35-270 (487)
319 4azs_A Methyltransferase WBDD; 99.9 9.4E-29 3.2E-33 283.4 2.8 185 555-760 241-437 (569)
320 3oja_A Leucine-rich immune mol 99.9 4.6E-27 1.6E-31 265.9 14.5 234 60-356 30-265 (487)
321 2z62_A TOLL-like receptor 4, v 99.9 1.5E-25 5.1E-30 234.8 20.9 224 20-295 11-238 (276)
322 3ogk_B Coronatine-insensitive 99.9 2.1E-28 7E-33 286.5 -1.2 391 13-443 109-548 (592)
323 2z62_A TOLL-like receptor 4, v 99.9 1.7E-25 5.7E-30 234.4 18.6 214 7-271 21-238 (276)
324 2p1m_B Transport inhibitor res 99.9 5.2E-28 1.8E-32 283.2 -6.3 410 10-446 60-519 (594)
325 2o6q_A Variable lymphocyte rec 99.9 2.3E-24 7.7E-29 224.8 21.9 203 17-271 17-219 (270)
326 2p1m_B Transport inhibitor res 99.9 4.2E-28 1.4E-32 284.0 -7.3 396 10-446 99-544 (594)
327 3rfs_A Internalin B, repeat mo 99.9 2.7E-25 9.4E-30 231.9 14.0 228 41-330 20-247 (272)
328 2o6q_A Variable lymphocyte rec 99.9 2.2E-24 7.5E-29 224.8 19.7 203 128-344 18-220 (270)
329 1p9a_G Platelet glycoprotein I 99.9 2E-24 7E-29 227.0 19.1 203 12-270 6-208 (290)
330 3goz_A Leucine-rich repeat-con 99.9 2.7E-26 9.3E-31 250.2 4.8 260 2-301 8-304 (362)
331 3rfs_A Internalin B, repeat mo 99.9 1.1E-24 3.7E-29 227.4 16.7 229 17-283 20-248 (272)
332 1p9a_G Platelet glycoprotein I 99.9 3.9E-24 1.3E-28 224.8 20.2 204 36-295 6-209 (290)
333 3goz_A Leucine-rich repeat-con 99.9 1.1E-25 3.6E-30 245.6 5.4 262 21-322 3-301 (362)
334 2xwt_C Thyrotropin receptor; s 99.9 2.9E-24 9.8E-29 219.7 15.7 206 27-291 22-236 (239)
335 4ay9_X Follicle-stimulating ho 99.9 1.4E-24 4.9E-29 235.3 13.8 240 44-315 13-256 (350)
336 3en9_A Glycoprotease, O-sialog 99.9 1.6E-25 5.6E-30 255.2 6.4 189 549-762 337-539 (540)
337 2xwt_C Thyrotropin receptor; s 99.9 1E-23 3.5E-28 215.5 14.3 185 7-221 25-218 (239)
338 3m19_A Variable lymphocyte rec 99.9 5.1E-23 1.7E-27 212.0 18.6 181 16-223 14-194 (251)
339 2ca6_A RAN GTPase-activating p 99.9 2.2E-25 7.4E-30 245.7 -1.3 179 146-346 114-320 (386)
340 4glp_A Monocyte differentiatio 99.9 9.9E-24 3.4E-28 224.7 11.3 233 16-271 64-308 (310)
341 4ay9_X Follicle-stimulating ho 99.9 4.7E-23 1.6E-27 223.3 16.9 242 67-340 12-257 (350)
342 2ca6_A RAN GTPase-activating p 99.9 2.2E-25 7.5E-30 245.6 -2.2 204 149-371 89-320 (386)
343 4glp_A Monocyte differentiatio 99.9 1.7E-23 5.7E-28 223.0 12.2 228 41-318 65-307 (310)
344 1h6u_A Internalin H; cell adhe 99.9 4.5E-23 1.5E-27 219.0 14.3 210 18-270 21-230 (308)
345 2ast_B S-phase kinase-associat 99.9 7E-24 2.4E-28 229.1 7.8 252 18-327 49-315 (336)
346 1h6u_A Internalin H; cell adhe 99.9 2.1E-22 7.3E-27 213.8 17.3 216 40-299 19-234 (308)
347 3m19_A Variable lymphocyte rec 99.9 2.9E-22 1E-26 206.3 16.9 171 2-193 24-194 (251)
348 2ast_B S-phase kinase-associat 99.9 4E-23 1.4E-27 223.1 8.1 244 9-303 61-315 (336)
349 2o6s_A Variable lymphocyte rec 99.9 7E-22 2.4E-26 197.2 13.9 181 18-232 9-189 (208)
350 1zar_A RIO2 kinase; serine kin 99.9 2.1E-22 7.3E-27 210.0 7.6 147 546-735 88-253 (282)
351 3cvr_A Invasion plasmid antige 99.9 1.8E-21 6.1E-26 221.5 15.4 108 153-280 139-253 (571)
352 2o6s_A Variable lymphocyte rec 99.8 1.3E-20 4.5E-25 187.9 17.4 180 130-330 11-190 (208)
353 3cvr_A Invasion plasmid antige 99.8 1.1E-21 3.7E-26 223.3 9.1 189 65-306 60-255 (571)
354 2v9t_B SLIT homolog 2 protein 99.8 1.7E-20 5.8E-25 188.5 15.6 153 18-191 13-165 (220)
355 3e6j_A Variable lymphocyte rec 99.8 8.2E-20 2.8E-24 184.8 16.1 153 17-191 20-172 (229)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 7E-20 2.4E-24 184.0 15.4 153 18-191 13-166 (220)
357 1h6t_A Internalin B; cell adhe 99.8 4.1E-20 1.4E-24 194.3 14.2 171 37-246 43-213 (291)
358 1m9s_A Internalin B; cell inva 99.8 3.3E-20 1.1E-24 213.7 14.3 197 17-254 22-218 (605)
359 2xot_A Amphoterin-induced prot 99.8 2.3E-20 7.8E-25 203.0 12.0 180 19-246 21-202 (361)
360 1m9s_A Internalin B; cell inva 99.8 4.7E-20 1.6E-24 212.4 14.7 200 39-279 20-219 (605)
361 1h6t_A Internalin B; cell adhe 99.8 2.5E-20 8.5E-25 196.0 11.1 191 41-272 25-215 (291)
362 3sb4_A Hypothetical leucine ri 99.8 1.9E-20 6.6E-25 201.0 10.3 288 15-336 24-328 (329)
363 2v9t_B SLIT homolog 2 protein 99.8 3.8E-20 1.3E-24 185.9 10.8 66 386-451 105-170 (220)
364 1xeu_A Internalin C; cellular 99.8 1.4E-20 4.8E-25 194.6 7.7 171 14-223 17-187 (263)
365 2xot_A Amphoterin-induced prot 99.8 4.9E-20 1.7E-24 200.4 12.1 168 2-191 28-202 (361)
366 2v70_A SLIT-2, SLIT homolog 2 99.8 4.3E-20 1.5E-24 185.5 10.6 158 261-453 15-173 (220)
367 1dce_A Protein (RAB geranylger 99.8 1.4E-21 4.8E-26 223.8 -5.5 189 61-273 346-549 (567)
368 1xeu_A Internalin C; cellular 99.8 1.2E-19 4E-24 187.7 9.2 125 38-191 17-141 (263)
369 4b8c_D Glucose-repressible alc 99.8 1.1E-19 3.9E-24 214.7 7.9 199 70-319 207-405 (727)
370 4ezg_A Putative uncharacterize 99.8 5.5E-19 1.9E-23 174.3 11.4 153 37-221 41-194 (197)
371 4b8c_D Glucose-repressible alc 99.8 2.2E-19 7.6E-24 212.2 10.1 236 154-450 173-408 (727)
372 1dce_A Protein (RAB geranylger 99.8 3.6E-21 1.2E-25 220.5 -5.2 211 14-264 347-567 (567)
373 3e6j_A Variable lymphocyte rec 99.8 3.2E-18 1.1E-22 173.1 16.6 156 41-224 20-175 (229)
374 1zth_A RIO1 serine protein kin 99.8 6E-19 2E-23 181.8 10.2 137 550-708 49-219 (258)
375 3sb4_A Hypothetical leucine ri 99.8 1.7E-18 5.8E-23 185.8 12.7 265 11-311 43-327 (329)
376 4fdw_A Leucine rich hypothetic 99.8 2E-17 6.9E-22 181.0 21.0 265 40-342 113-383 (401)
377 4fdw_A Leucine rich hypothetic 99.7 5.1E-17 1.8E-21 177.8 20.3 267 14-318 111-383 (401)
378 4ezg_A Putative uncharacterize 99.7 8.3E-18 2.8E-22 165.9 12.4 153 61-246 41-194 (197)
379 1w8a_A SLIT protein; signaling 99.7 2.6E-17 9E-22 161.3 13.1 133 211-347 11-144 (192)
380 1w8a_A SLIT protein; signaling 99.7 8.6E-18 3E-22 164.8 8.8 80 260-342 11-91 (192)
381 2ell_A Acidic leucine-rich nuc 99.7 4.5E-17 1.6E-21 156.1 11.4 136 16-194 24-163 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 153.4 10.9 140 64-227 24-165 (168)
383 4fs7_A Uncharacterized protein 99.7 2.4E-15 8.1E-20 165.5 21.9 329 34-438 65-393 (394)
384 2wfh_A SLIT homolog 2 protein 99.7 2.7E-16 9.3E-21 154.0 12.8 128 18-167 12-139 (193)
385 2je0_A Acidic leucine-rich nuc 99.7 9.7E-17 3.3E-21 150.4 9.0 129 15-186 16-148 (149)
386 2wfh_A SLIT homolog 2 protein 99.7 5.1E-16 1.8E-20 152.0 13.4 128 42-191 12-139 (193)
387 4gyi_A RIO2 kinase; protein ki 99.6 1.7E-16 5.7E-21 168.9 9.0 135 550-709 97-266 (397)
388 2o6r_A Variable lymphocyte rec 99.6 1.2E-15 4.1E-20 147.5 13.1 103 18-124 9-111 (177)
389 1a9n_A U2A', U2A'; complex (nu 99.6 4.9E-16 1.7E-20 150.1 8.3 134 36-191 15-153 (176)
390 2o6r_A Variable lymphocyte rec 99.6 1.3E-15 4.3E-20 147.3 11.2 133 210-346 9-141 (177)
391 4fs7_A Uncharacterized protein 99.6 1.9E-14 6.4E-19 158.3 21.0 329 10-414 65-393 (394)
392 1a9n_A U2A', U2A'; complex (nu 99.6 6.6E-16 2.3E-20 149.1 7.8 135 11-168 14-154 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 2.6E-17 8.8E-22 162.5 -2.8 157 11-191 13-185 (198)
394 2je0_A Acidic leucine-rich nuc 99.6 2.3E-15 7.8E-20 141.0 8.8 128 153-289 16-148 (149)
395 3g39_A Variable lymphocyte rec 99.5 2.7E-14 9.2E-19 136.6 10.9 106 17-126 10-115 (170)
396 1ds9_A Outer arm dynein; leuci 99.5 1.7E-16 5.7E-21 156.6 -5.2 156 253-447 14-186 (198)
397 2r9u_A Variable lymphocyte rec 99.5 5.2E-14 1.8E-18 135.1 11.1 106 17-126 13-118 (174)
398 4gt6_A Cell surface protein; l 99.5 1.5E-12 5.3E-17 143.0 22.4 329 35-445 58-390 (394)
399 3g39_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 131.4 11.2 109 41-170 10-118 (170)
400 2r9u_A Variable lymphocyte rec 99.5 2.1E-13 7E-18 130.9 11.3 107 42-169 14-120 (174)
401 4gt6_A Cell surface protein; l 99.4 2.7E-12 9.2E-17 141.0 19.6 302 10-341 57-369 (394)
402 3un9_A NLR family member X1; l 99.4 6.5E-15 2.2E-19 159.5 -4.7 175 64-254 72-260 (372)
403 3un9_A NLR family member X1; l 99.3 2.1E-14 7.1E-19 155.6 -4.8 189 16-221 72-283 (372)
404 2ifg_A High affinity nerve gro 99.3 2.2E-12 7.5E-17 139.3 10.2 104 19-126 11-116 (347)
405 4h09_A Hypothetical leucine ri 99.3 2.3E-10 8E-15 124.9 23.2 101 12-120 42-142 (379)
406 2ifg_A High affinity nerve gro 99.3 5.8E-12 2E-16 136.0 8.6 97 2-101 19-116 (347)
407 3tm0_A Aminoglycoside 3'-phosp 99.3 1.9E-11 6.6E-16 126.2 12.0 147 542-706 8-212 (263)
408 4h09_A Hypothetical leucine ri 99.2 1.4E-09 4.7E-14 118.8 21.5 310 35-433 41-356 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 2.6E-10 8.9E-15 117.6 8.7 137 547-706 19-213 (264)
410 2ra8_A Uncharacterized protein 98.9 1.7E-10 5.7E-15 123.7 2.5 67 153-221 251-320 (362)
411 2ra8_A Uncharacterized protein 98.9 2.7E-10 9.1E-15 122.1 3.3 182 9-219 132-341 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.9 5E-10 1.7E-14 118.1 3.2 191 553-762 25-288 (304)
413 3dxp_A Putative acyl-COA dehyd 98.8 4.6E-09 1.6E-13 113.6 9.5 144 553-708 43-249 (359)
414 3rw6_A Nuclear RNA export fact 98.6 3.4E-09 1.2E-13 107.3 -0.1 107 12-120 137-258 (267)
415 3r70_A Aminoglycoside phosphot 98.5 3.8E-07 1.3E-11 96.6 11.4 136 549-708 38-238 (320)
416 1io0_A Tropomodulin; LRR prote 98.5 1.3E-08 4.4E-13 98.3 -0.6 72 148-221 59-136 (185)
417 1io0_A Tropomodulin; LRR prote 98.5 1.5E-08 5.2E-13 97.8 -0.2 128 79-221 27-164 (185)
418 3rw6_A Nuclear RNA export fact 98.4 8.6E-08 2.9E-12 97.1 3.5 86 8-95 162-258 (267)
419 3d1u_A Putative fructosamine-3 98.4 1E-06 3.6E-11 91.2 11.0 76 552-637 19-97 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.4 1.6E-06 5.5E-11 89.4 11.4 142 546-706 23-222 (272)
421 3tdw_A Gentamicin resistance p 98.3 2.3E-06 8E-11 89.8 10.9 135 554-707 25-224 (306)
422 2olc_A MTR kinase, methylthior 98.1 1.3E-05 4.5E-10 87.5 13.1 76 553-635 35-120 (397)
423 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.3E-05 4.4E-10 86.1 10.4 76 552-638 45-122 (362)
424 3ats_A Putative uncharacterize 98.0 2.4E-05 8.2E-10 84.1 10.9 85 553-639 25-122 (357)
425 3e4g_A ATP synthase subunit S, 97.8 3.2E-06 1.1E-10 79.2 1.2 84 40-124 61-150 (176)
426 3f7w_A Putative fructosamine-3 97.8 3.2E-05 1.1E-09 80.3 8.5 79 549-637 16-97 (288)
427 3e4g_A ATP synthase subunit S, 97.8 9.7E-06 3.3E-10 75.9 3.2 92 8-99 53-150 (176)
428 1pgv_A TMD-1, tropomodulin TMD 97.7 6.7E-06 2.3E-10 78.5 1.2 40 128-167 72-111 (197)
429 1pgv_A TMD-1, tropomodulin TMD 97.7 7.4E-06 2.5E-10 78.2 0.8 73 144-218 60-136 (197)
430 3jr1_A Putative fructosamine-3 97.6 0.00024 8.2E-09 74.0 11.4 75 553-637 41-118 (312)
431 2q83_A YTAA protein; 2635576, 97.5 0.00044 1.5E-08 73.6 11.4 78 554-637 38-118 (346)
432 2pyw_A Uncharacterized protein 97.4 0.00053 1.8E-08 75.2 10.3 80 677-758 231-313 (420)
433 3rfe_A Platelet glycoprotein I 97.2 0.00045 1.5E-08 61.6 6.2 62 388-451 11-73 (130)
434 3dxq_A Choline/ethanolamine ki 97.1 0.0012 4.1E-08 68.8 9.8 71 553-637 23-95 (301)
435 3rfe_A Platelet glycoprotein I 97.1 0.00058 2E-08 60.8 6.2 57 130-191 12-68 (130)
436 2ppq_A HSK, HK, homoserine kin 97.1 0.00086 2.9E-08 70.6 8.5 166 536-706 5-216 (322)
437 1zyl_A Hypothetical protein YI 97.0 0.0059 2E-07 64.3 13.2 97 535-636 8-113 (328)
438 3csv_A Aminoglycoside phosphot 96.8 0.007 2.4E-07 63.9 12.6 78 554-642 24-104 (333)
439 1nw1_A Choline kinase (49.2 KD 96.8 0.0031 1.1E-07 69.0 9.2 74 553-637 78-159 (429)
440 3c5i_A Choline kinase; choline 96.7 0.0021 7.3E-08 69.0 7.2 75 553-637 38-121 (369)
441 2yle_A Protein spire homolog 1 96.6 0.014 4.8E-07 55.8 11.1 102 636-760 34-135 (229)
442 3feg_A Choline/ethanolamine ki 96.6 0.005 1.7E-07 65.8 8.9 142 554-706 56-253 (379)
443 2qg7_A Ethanolamine kinase PV0 96.6 0.0059 2E-07 67.1 9.7 75 553-637 113-188 (458)
444 3i1a_A Spectinomycin phosphotr 95.4 0.026 8.9E-07 59.6 7.7 73 557-637 32-108 (339)
445 3f2s_A CK, chetk-alpha, cholin 94.9 0.072 2.5E-06 57.1 9.3 75 554-637 58-158 (401)
446 3mes_A Choline kinase; malaria 94.1 0.082 2.8E-06 57.2 7.7 75 553-637 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 89.1 0.64 2.2E-05 50.1 7.4 28 679-706 245-279 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 81.0 0.15 5.3E-06 56.0 -2.5 61 552-615 146-214 (463)
449 2ks1_B Epidermal growth factor 77.5 3.7 0.00013 27.8 4.4 10 512-521 30-39 (44)
450 2lz0_A Uncharacterized protein 67.7 5.6 0.00019 32.8 4.4 44 76-121 8-51 (100)
451 2lz0_A Uncharacterized protein 66.4 11 0.00038 30.9 6.0 50 49-99 5-54 (100)
452 4ann_A ESSB; membrane protein, 63.5 18 0.00063 34.3 7.5 82 652-763 77-159 (215)
453 2l2t_A Receptor tyrosine-prote 54.6 10 0.00034 25.7 2.8 9 513-521 30-38 (44)
454 4ano_A ESSB; membrane protein, 46.2 47 0.0016 31.6 7.3 81 652-762 81-163 (219)
455 2k9y_A Ephrin type-A receptor 29.2 18 0.00063 23.9 1.0 11 498-508 17-27 (41)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-59 Score=564.71 Aligned_cols=460 Identities=30% Similarity=0.463 Sum_probs=289.7
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCC-CCCcEEecccccCcccC
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLL-RNLVYLNVAENQFSGMF 80 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~ 80 (854)
|+++|.+|..|+.+++|++|+|++|.+++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|++++..
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~ 310 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECC
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCcc
Confidence 3444444444444444444444444444433332 34444444444444444555555443 55555555555555555
Q ss_pred hhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCC------------CCceeeccCccCCCCCCCCCCc
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLK------------NLWWLNLEQNNLGMGTASSIPD 148 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~------------~L~~L~L~~N~l~~~~~~~~p~ 148 (854)
|..|+++++|++|+|++|+++|.+|...|.++++|++|++++|++. +|+.|+|++|.+. +.+|.
T Consensus 311 p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~----~~~~~ 386 (768)
T 3rgz_A 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS----GPILP 386 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEE----EECCT
T ss_pred chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcC----CCcCh
Confidence 5555555555555555555555555555555555555555555442 5555555555552 23344
Q ss_pred cccC--CCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCCh
Q 043388 149 SLSN--ASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPH 226 (854)
Q Consensus 149 ~~~~--l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 226 (854)
.+.. +++|++|+|++|++++..|..|..+++|++|+|++|+++.... ..+..+++|++|++++|.+++.+|.
T Consensus 387 ~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p------~~l~~l~~L~~L~L~~n~l~~~~p~ 460 (768)
T 3rgz_A 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP------SSLGSLSKLRDLKLWLNMLEGEIPQ 460 (768)
T ss_dssp TTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCC------GGGGGCTTCCEEECCSSCCCSCCCG
T ss_pred hhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCccc------HHHhcCCCCCEEECCCCcccCcCCH
Confidence 4433 4555555555555555555555555555555555555543221 2345555555555555555555555
Q ss_pred hhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccc
Q 043388 227 SIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTK 306 (854)
Q Consensus 227 ~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 306 (854)
.+..+. .|+.|++++|++++.+|..|.++++|++|+|++|++++.+|.+|+.+++|++|+|++|++++.+|..++.+++
T Consensus 461 ~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 539 (768)
T 3rgz_A 461 ELMYVK-TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539 (768)
T ss_dssp GGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTT
T ss_pred HHcCCC-CceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 555554 4555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cchhccccceecccCCCCCcCCCCCc----------------------------------------------ccccCCCc
Q 043388 307 LADLALSFNNLQGNIPSSLGNCQNLK----------------------------------------------GFDASHNK 340 (854)
Q Consensus 307 L~~L~L~~N~l~~~~~~~~~~l~~L~----------------------------------------------~L~ls~N~ 340 (854)
|+.|++++|++++.+|..+.....+. .++++.|.
T Consensus 540 L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 619 (768)
T 3rgz_A 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619 (768)
T ss_dssp CCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCE
T ss_pred CCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccce
Confidence 55555555555555555443322221 22333344
Q ss_pred ccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcc
Q 043388 341 LTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNN 420 (854)
Q Consensus 341 l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 420 (854)
+.|.+|..+..+..+.. +++++|.+++.+|..+++ +..|+.|+|++|+++|.+|..|+.+++|+.|||++|+
T Consensus 620 ~~g~~~~~~~~l~~L~~-LdLs~N~l~g~ip~~l~~-------l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 620 YGGHTSPTFDNNGSMMF-LDMSYNMLSGYIPKEIGS-------MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp EEEECCCSCSSSBCCCE-EECCSSCCBSCCCGGGGG-------CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ecccCchhhhccccccE-EECcCCcccccCCHHHhc-------cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 55555555544555544 899999999999999998 4579999999999999999999999999999999999
Q ss_pred cccccchhhcCccCCCeeecccccCcccCCCCccccCcccccccccccccCCccccccccCCCCCC
Q 043388 421 LSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFSNKTKISLQVNVKLCGGIDELHLLSCPSKGS 486 (854)
Q Consensus 421 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~c~~~~~ 486 (854)
++|.+|..+..+++|++|||++|+++|.+|..++|..+...++.+|+++||.|.. .|.....
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~----~C~~~~~ 753 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP----RCDPSNA 753 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC----CCCSCC-
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc----CCCCCcc
Confidence 9999999999999999999999999999999999999999999999999998632 6765443
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-54 Score=519.65 Aligned_cols=454 Identities=31% Similarity=0.442 Sum_probs=334.0
Q ss_pred CcccccCchh---hhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcc
Q 043388 2 NKLEGQIPEE---IGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSG 78 (854)
Q Consensus 2 n~~~~~~p~~---~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 78 (854)
|++++..|.. +.++++|++|+|++|.+++..| ++.+++|++|+|++|++++.+|. |+.+++|++|+|++|++++
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~ 237 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSG 237 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCS
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCC
Confidence 5566666655 5666666666666666665443 26677788888888888766666 7888888888888888887
Q ss_pred cChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCC------------CCCceeeccCccCCCCCCCCC
Q 043388 79 MFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSL------------KNLWWLNLEQNNLGMGTASSI 146 (854)
Q Consensus 79 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l------------~~L~~L~L~~N~l~~~~~~~~ 146 (854)
..|.+|.++++|++|+|++|++++.+|.. .+++|++|++++|++ ++|+.|+|++|.+. +.+
T Consensus 238 ~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~----~~~ 310 (768)
T 3rgz_A 238 DFSRAISTCTELKLLNISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY----GAV 310 (768)
T ss_dssp CHHHHTTTCSSCCEEECCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEE----ECC
T ss_pred cccHHHhcCCCCCEEECCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCC----Ccc
Confidence 78888888888888888888877666543 666777777766542 45677777777663 345
Q ss_pred CccccCCCCCCEEecCCCcCcccCCcC-ccccCCCCeEecccccccCCCCCChh-------------------hhhhccC
Q 043388 147 PDSLSNASNLERLDLSGNQFKGKVSID-FSSLKNLWWLNLEQNNLGMGTANDLD-------------------FVTLLTN 206 (854)
Q Consensus 147 p~~~~~l~~L~~L~Ls~N~i~~~~~~~-f~~l~~L~~L~L~~N~l~~~~~~~~~-------------------~~~~~~~ 206 (854)
|..|+++++|++|+|++|++++..|.. |..+++|++|+|++|+++......+. .+..+..
T Consensus 311 p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~ 390 (768)
T 3rgz_A 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTC
T ss_pred chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhh
Confidence 666667777777777777766444433 66666666666666666421111110 0111222
Q ss_pred --CCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCc
Q 043388 207 --CSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQ 284 (854)
Q Consensus 207 --l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 284 (854)
+++|++|++++|++++.+|..+..+. .|+.|++++|.+++.+|..|.++++|+.|++++|++++..|..|..+++|+
T Consensus 391 ~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 469 (768)
T 3rgz_A 391 NPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469 (768)
T ss_dssp STTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred cccCCccEEECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCce
Confidence 56677777777777777777777775 677788888887777777777777888888888887777777777778888
Q ss_pred eeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcC
Q 043388 285 QLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHN 364 (854)
Q Consensus 285 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n 364 (854)
+|++++|++++.+|..+.++++|+.|+|++|++++.+|.+++.+++|+.|++++|++++.+|..+..+..+.. +++++|
T Consensus 470 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~-L~Ls~N 548 (768)
T 3rgz_A 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW-LDLNTN 548 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCE-EECCSS
T ss_pred EEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCE-EECCCC
Confidence 8888888887777777888888888888888887777878888888888888888887777777777776655 778888
Q ss_pred CCCCCcCccccccccc---------------------------------------------------------------c
Q 043388 365 LLNDSLPLQVGNLKNL---------------------------------------------------------------V 381 (854)
Q Consensus 365 ~l~~~~p~~~~~l~~l---------------------------------------------------------------~ 381 (854)
.+++.+|..+.....+ +
T Consensus 549 ~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~ 628 (768)
T 3rgz_A 549 LFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628 (768)
T ss_dssp EEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSC
T ss_pred ccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhh
Confidence 8777777665432111 1
Q ss_pred ccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCC-ccccCccc
Q 043388 382 ITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTK-GVFSNKTK 460 (854)
Q Consensus 382 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~ 460 (854)
..+.+|+.|||++|+++|.+|..|+.++.|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|.. ..+.....
T Consensus 629 ~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 708 (768)
T 3rgz_A 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTE 708 (768)
T ss_dssp SSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSE
T ss_pred hccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCE
Confidence 12467999999999999999999999999999999999999999999999999999999999999999975 44566777
Q ss_pred ccccccc
Q 043388 461 ISLQVNV 467 (854)
Q Consensus 461 ~~~~~n~ 467 (854)
+++..|.
T Consensus 709 L~ls~N~ 715 (768)
T 3rgz_A 709 IDLSNNN 715 (768)
T ss_dssp EECCSSE
T ss_pred EECcCCc
Confidence 7777774
No 3
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.6e-52 Score=488.43 Aligned_cols=455 Identities=22% Similarity=0.199 Sum_probs=384.1
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
+|+|++..|..|+.+++|++|+|++|++++..|.+|+.+++|++|+|++|++++..|..|+.+++|++|+|++|+++++.
T Consensus 42 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~ 121 (606)
T 3t6q_A 42 FNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSID 121 (606)
T ss_dssp TCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGG
T ss_pred CCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCC
Confidence 47888888889999999999999999998888888999999999999999998888889999999999999999999877
Q ss_pred hhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCC-----------CCCc--eeeccCccCCCCCCCCCC
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSL-----------KNLW--WLNLEQNNLGMGTASSIP 147 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l-----------~~L~--~L~L~~N~l~~~~~~~~p 147 (854)
|..|+++++|++|+|++|+++ .++...+..+++|++|++++|.+ .+|+ .|++++|.+.......+.
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~ 200 (606)
T 3t6q_A 122 FIPLHNQKTLESLYLGSNHIS-SIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFD 200 (606)
T ss_dssp GSCCTTCTTCCEEECCSSCCC-CCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTT
T ss_pred cchhccCCcccEEECCCCccc-ccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhh
Confidence 888899999999999999988 65544455689999999988865 3556 788888888432211110
Q ss_pred ---------------------------------------------ccccCCC--CCCEEecCCCcCcccCCcCccccCCC
Q 043388 148 ---------------------------------------------DSLSNAS--NLERLDLSGNQFKGKVSIDFSSLKNL 180 (854)
Q Consensus 148 ---------------------------------------------~~~~~l~--~L~~L~Ls~N~i~~~~~~~f~~l~~L 180 (854)
..|.++. +|+.|++++|+++++.+..|..+++|
T Consensus 201 ~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 280 (606)
T 3t6q_A 201 SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGL 280 (606)
T ss_dssp TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTC
T ss_pred hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCC
Confidence 0111111 68889999999998888889999999
Q ss_pred CeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCc-cccccccC
Q 043388 181 WWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPS-GIRNLVNL 259 (854)
Q Consensus 181 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~-~~~~l~~L 259 (854)
++|++++|+++.++. .+.++++|++|++++|.+++..|..+..++ .|+.|++++|.+.+.+|. .|.++++|
T Consensus 281 ~~L~l~~n~l~~lp~-------~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L 352 (606)
T 3t6q_A 281 QELDLTATHLSELPS-------GLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENL 352 (606)
T ss_dssp SEEECTTSCCSCCCS-------SCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTC
T ss_pred CEEeccCCccCCCCh-------hhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcC
Confidence 999999999986654 478899999999999999977788888886 799999999999866654 48999999
Q ss_pred CeeeccccccccCC--CCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCC-CCcCCCCCccccc
Q 043388 260 IALTIEVNQLHGII--PDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPS-SLGNCQNLKGFDA 336 (854)
Q Consensus 260 ~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l 336 (854)
++|++++|++++.. +..+..+++|++|++++|++.+..|..|..+++|+.|++++|.+++..|. .+..+++|+.|++
T Consensus 353 ~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 432 (606)
T 3t6q_A 353 RELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNL 432 (606)
T ss_dssp CEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEEC
T ss_pred CEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEEC
Confidence 99999999998776 78899999999999999999988899999999999999999999977654 4889999999999
Q ss_pred CCCcccCccchhhcchhhhHHHHHhhcCCCCCCcC---ccccccccccccccccceeeccCcccccCCCcccccCCCCCE
Q 043388 337 SHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLP---LQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKE 413 (854)
Q Consensus 337 s~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p---~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 413 (854)
++|.+++..|..+..+..+.. +++++|.+.+... ..++. +.+|++|+|++|++++.+|..|+.+++|++
T Consensus 433 ~~n~l~~~~~~~~~~l~~L~~-L~L~~n~l~~~~~~~~~~~~~-------l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 504 (606)
T 3t6q_A 433 SHSLLDISSEQLFDGLPALQH-LNLQGNHFPKGNIQKTNSLQT-------LGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504 (606)
T ss_dssp TTCCCBTTCTTTTTTCTTCCE-EECTTCBCGGGEECSSCGGGG-------CTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCccCCcCHHHHhCCCCCCE-EECCCCCCCccccccchhhcc-------CCCccEEECCCCccCccChhhhccccCCCE
Confidence 999999878887877777765 9999999876322 33444 568999999999999999999999999999
Q ss_pred EEccCcccccccchhhcCccCCCeeecccccCcccCCCC-ccccCcccccccccccccCCc
Q 043388 414 LNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTK-GVFSNKTKISLQVNVKLCGGI 473 (854)
Q Consensus 414 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 473 (854)
|+|++|++++..|..+.+++.| .|++++|++++.+|.. ..+.....+.+.+|++.|.++
T Consensus 505 L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 505 VDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp EECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred EECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9999999999999999999999 9999999999887763 456778889999999998654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-52 Score=439.64 Aligned_cols=261 Identities=29% Similarity=0.438 Sum_probs=202.9
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
+++.+.++||+|+||+||+|++.+ .||||+++... ....+.|.+|++++++++|||||+++|+|... ..
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~ 106 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------NL 106 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC------eE
Confidence 567788999999999999999863 48999987443 33457899999999999999999999998542 36
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
+||||||++|+|.+++..... .+++.+++.|+.|||.||+|||++ +||||||||+|||+++++.+|+ |||+
T Consensus 107 ~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGl 178 (307)
T 3omv_A 107 AIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp EEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred EEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccC
Confidence 999999999999999976542 689999999999999999999999 9999999999999999988887 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMG---SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|+......... .....+||+.|||||++.+ +.|+.++|||||||++|||+||+.||....... .....+......
T Consensus 179 a~~~~~~~~~~-~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~ 256 (307)
T 3omv_A 179 ATVKSRWSGSQ-QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYAS 256 (307)
T ss_dssp CBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCC
T ss_pred ceecccCCcce-eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCC
Confidence 98765433221 2233579999999999864 458999999999999999999999997543211 111111111100
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
|.. .....+|+.++.+++.+||+.||++||||.||++.|+.+...+
T Consensus 257 -------p~~---------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 257 -------PDL---------------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp -------CCS---------------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred -------CCc---------------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 000 0011234667889999999999999999999999999887665
No 5
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-53 Score=446.61 Aligned_cols=264 Identities=24% Similarity=0.399 Sum_probs=211.8
Q ss_pred hhccccCccCCCcceEEEEeEEC-----CCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILG-----GEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
++|.+.+.||+|+||+||+|++. .++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 57889999999999999999975 357899999998766666788999999999999999999999998755
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCC-------cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC
Q 043388 623 DFKALVFEYMENGSLEDWLHQSND-------HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 695 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 695 (854)
..+||||||++|+|.++++..+. ......++|.+++.|+.|||.||+|||++ +||||||||+|||++.+
T Consensus 89 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 89 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp -SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 68999999999999999986531 11223799999999999999999999999 99999999999999999
Q ss_pred ccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhH
Q 043388 696 MVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 696 ~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~ 773 (854)
+.+|+ |||+|+......... ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+..
T Consensus 165 ~~~Ki~DFGla~~~~~~~~~~-~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~ 241 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIE 241 (299)
T ss_dssp GCEEECCCSCHHHHTGGGCEE-ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH
T ss_pred CcEEECCcccceecCCCCcee-ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence 88887 999998765543221 1122458999999999999999999999999999999999 99999754221 1111
Q ss_pred HhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 774 FVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 774 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
.+... . +.+.+..|+.++.+++.+||+.||++||||+||.+.|+++.+.
T Consensus 242 ~i~~~---~-----------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 242 CITQG---R-----------------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHHT---C-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHcC---C-----------------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11110 0 0111223466788999999999999999999999999987653
No 6
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7.1e-53 Score=448.13 Aligned_cols=264 Identities=25% Similarity=0.393 Sum_probs=206.7
Q ss_pred hhccccCccCCCcceEEEEeEEC-----CCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILG-----GEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
++|.+.++||+|+||+||+|++. .+++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 57888899999999999999975 357899999998766666788999999999999999999999998755
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCc---------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDH---------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 693 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 693 (854)
..+||||||++|+|.++++..... ....+++|.+++.|+.|||.||+|||+. +||||||||+|||++
T Consensus 117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 689999999999999999875421 1123699999999999999999999999 999999999999999
Q ss_pred CCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchH
Q 043388 694 HDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTL 771 (854)
Q Consensus 694 ~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~ 771 (854)
.++.+|+ |||+|+......... ......||+.|||||++.+..++.++|||||||++|||+| |+.||...... ..
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~~~-~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~ 269 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDYYR-VGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EA 269 (329)
T ss_dssp TTTEEEECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HH
T ss_pred CCCcEEEcccccceeccCCCcce-ecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HH
Confidence 9998887 999998775443221 1223569999999999999999999999999999999999 99999754221 11
Q ss_pred hHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 772 HEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 772 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
...+.... +.+.+..|++++.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 270 ~~~i~~g~--------------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 270 IDCITQGR--------------------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHHHTC--------------------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHcCC--------------------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 11111100 0111223466788999999999999999999999999988754
No 7
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.2e-51 Score=485.38 Aligned_cols=472 Identities=22% Similarity=0.224 Sum_probs=336.8
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
+|+|++..|..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|++++..+..|+.+++|++|+|++|+++++.
T Consensus 34 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 113 (680)
T 1ziw_A 34 HNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIK 113 (680)
T ss_dssp SSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccC
Confidence 47788777778888888888888888888878888888888888888888888665567888888888888888888777
Q ss_pred hhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCC-------------CCCceeeccCccCCCCCCC---
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSL-------------KNLWWLNLEQNNLGMGTAS--- 144 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l-------------~~L~~L~L~~N~l~~~~~~--- 144 (854)
|.+|+++++|++|+|++|+++ .++...|.++++|++|++++|.+ ++|+.|+|++|.+......
T Consensus 114 ~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 192 (680)
T 1ziw_A 114 NNPFVKQKNLITLDLSHNGLS-STKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFH 192 (680)
T ss_dssp SCTTTTCTTCCEEECCSSCCS-CCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGG
T ss_pred hhHccccCCCCEEECCCCccc-ccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhh
Confidence 788888888888888888887 55666678888888888887753 4577888888877432211
Q ss_pred --------------------------------------------CCCccccCCC--CCCEEecCCCcCcccCCcCccccC
Q 043388 145 --------------------------------------------SIPDSLSNAS--NLERLDLSGNQFKGKVSIDFSSLK 178 (854)
Q Consensus 145 --------------------------------------------~~p~~~~~l~--~L~~L~Ls~N~i~~~~~~~f~~l~ 178 (854)
..|..|.+++ +|++|+|++|+++++.+..|..++
T Consensus 193 ~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (680)
T 1ziw_A 193 AIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLP 272 (680)
T ss_dssp GSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcc
Confidence 1123344443 378888888888777777788888
Q ss_pred CCCeEecccccccCCCCCChh-----------------------hh----hhccCCCCCcEEEcccCcCcccCChhhhhh
Q 043388 179 NLWWLNLEQNNLGMGTANDLD-----------------------FV----TLLTNCSSLKALSLCDNQFGGELPHSIANL 231 (854)
Q Consensus 179 ~L~~L~L~~N~l~~~~~~~~~-----------------------~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 231 (854)
+|++|+|++|++.......+. ++ ..|..+++|++|++++|.+++..|..|..+
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 352 (680)
T 1ziw_A 273 QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL 352 (680)
T ss_dssp TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTC
T ss_pred cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccc
Confidence 888888888877654332111 00 145566777777777777776656555554
Q ss_pred c---------------------------ccccEEEccCCcccccCCccccccccCCeeeccccccccCCC-CCccCcccC
Q 043388 232 S---------------------------STMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIP-DGVGELQHL 283 (854)
Q Consensus 232 ~---------------------------~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 283 (854)
+ +.|+.|++++|++++..|.+|.++++|+.|+|++|++++.+| ..|.++++|
T Consensus 353 ~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 432 (680)
T 1ziw_A 353 INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI 432 (680)
T ss_dssp TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTC
T ss_pred cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccc
Confidence 3 123344444455555555666666666666666666654333 456666666
Q ss_pred ceeeCccccccccCCccccCccccchhccccceec--ccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHh
Q 043388 284 QQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQ--GNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLAL 361 (854)
Q Consensus 284 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l 361 (854)
++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|+.|++++|++++..|..+..+..+.. +++
T Consensus 433 ~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~-L~L 511 (680)
T 1ziw_A 433 FEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI-LDL 511 (680)
T ss_dssp CEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE-EEC
T ss_pred cEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCE-EeC
Confidence 66666666666666666666666666666666665 456777777788888888888887555555556666554 778
Q ss_pred hcCCCCCCcCccccccc-cccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeec
Q 043388 362 AHNLLNDSLPLQVGNLK-NLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNL 440 (854)
Q Consensus 362 ~~n~l~~~~p~~~~~l~-~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 440 (854)
++|.+.+..+..+..-. ..+..+.+|++|+|++|+++...+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 512 s~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 591 (680)
T 1ziw_A 512 QHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNL 591 (680)
T ss_dssp CSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEEC
Confidence 88877654322211000 00112578999999999999666668999999999999999999888888999999999999
Q ss_pred ccccCcccCCCCc--cccCcccccccccccccCCcc
Q 043388 441 SYNHLEGEVPTKG--VFSNKTKISLQVNVKLCGGID 474 (854)
Q Consensus 441 s~N~l~~~~p~~~--~~~~~~~~~~~~n~~~c~~~~ 474 (854)
++|++++..|... .+.+...+.+.+|++.|.+..
T Consensus 592 ~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 592 QKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999998776532 467888899999999998753
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-51 Score=434.39 Aligned_cols=261 Identities=23% Similarity=0.347 Sum_probs=208.9
Q ss_pred hhccccCccCCCcceEEEEeEEC-----CCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILG-----GEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 621 (854)
++++..++||+|+||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--- 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ--- 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC---
Confidence 46777899999999999999974 356899999997543 334578999999999999999999999997755
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCc----------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceE
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVL 691 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 691 (854)
..+||||||++|+|.+++...... .....++|.+++.|+.|||+||+|||++ +||||||||+|||
T Consensus 103 --~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 103 --PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp --SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 579999999999999999764321 1123689999999999999999999999 9999999999999
Q ss_pred ecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCc
Q 043388 692 LDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGL 769 (854)
Q Consensus 692 l~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~ 769 (854)
+++++.+|+ |||+|+......... ......||+.|||||++.++.++.++|||||||++|||+| |+.||.+....
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~-~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-- 254 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYK-LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-- 254 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBC-SSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--
T ss_pred ECCCCCEEECCcccceeccCCCcee-EecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--
Confidence 999988887 999998775543222 1223579999999999999999999999999999999999 89999754221
Q ss_pred hHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 770 TLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
.+.+.+.. .. +.+.+++|+..+.+++.+||+.||++||||+||++.|+..
T Consensus 255 ~~~~~i~~---~~-----------------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 DVVEMIRN---RQ-----------------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHT---TC-----------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHc---CC-----------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11111111 00 0111233466788999999999999999999999999764
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.3e-51 Score=433.74 Aligned_cols=258 Identities=22% Similarity=0.250 Sum_probs=207.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.+.|...++||+|+||.||+|++..+|+.||||+++.... ..+|+.++++++|||||++++++.+.+ ..|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-----~~~ 126 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-----WVN 126 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-----EEE
Confidence 4578889999999999999999999999999999975432 247999999999999999999998765 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc--cccccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--VAHQNFSL 704 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~~~Dfg~ 704 (854)
||||||+||+|.++++..+ .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++ ++++|||+
T Consensus 127 ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 127 IFMELLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 9999999999999998765 789999999999999999999999 999999999999999875 34459999
Q ss_pred ccccccCCCCC--CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 705 SHQLDSASKTP--SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 705 ~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|+......... .....++||+.|||||++.+..|+.++||||+||++|||+||+.||....... ..........+.
T Consensus 198 a~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~~- 275 (336)
T 4g3f_A 198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEPPPI- 275 (336)
T ss_dssp CEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSCCGG-
T ss_pred CeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCCCCc-
Confidence 99876543221 12233579999999999999999999999999999999999999998653332 222222211100
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
. .....++..+.+++.+||+.||++|||+.|+++.+.......
T Consensus 276 -~-----------------------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 276 -R-----------------------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -G-----------------------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -h-----------------------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 0 011123556789999999999999999999999988876554
No 10
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.1e-51 Score=435.20 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=207.5
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
..|+..++||+|+||.||+|++..+|+.||||+++.......+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEE
Confidence 46999999999999999999999999999999998766666678899999999999999999999998766 7899
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccc
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSH 706 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~ 706 (854)
|||||+||+|.+++... .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++..|+ |||+|+
T Consensus 149 vmEy~~gg~L~~~l~~~-------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 99999999999999753 689999999999999999999999 9999999999999999887776 999999
Q ss_pred ccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccc
Q 043388 707 QLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEI 786 (854)
Q Consensus 707 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (854)
.+...... ....+||+.|||||++.+..|+.++||||+||++|||++|++||...... .....+....+....
T Consensus 219 ~~~~~~~~---~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~~~-- 291 (346)
T 4fih_A 219 QVSKEVPR---RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPRLK-- 291 (346)
T ss_dssp ECCSSSCC---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSSCCCCS--
T ss_pred ecCCCCCc---ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCCCC--
Confidence 87654322 22367999999999999999999999999999999999999999753211 111111111111100
Q ss_pred cCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 787 VDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 787 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
....++.++.+++.+||+.||++|||+.|+++
T Consensus 292 ----------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 292 ----------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ----------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 01112456789999999999999999999976
No 11
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-50 Score=487.92 Aligned_cols=444 Identities=20% Similarity=0.209 Sum_probs=309.2
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccC-CccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCccc
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQL-PDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGM 79 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 79 (854)
.|+|++..|..|+++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.|++..|..|+.+++|++|+|++|.+++.
T Consensus 33 ~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 112 (844)
T 3j0a_A 33 FNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDA 112 (844)
T ss_dssp SCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSC
T ss_pred CCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcc
Confidence 47777777788888888888888888554444 67788888888888888888877788888888888888888888765
Q ss_pred Chhh--hcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCC-------------CCCceeeccCccCCCCCCC
Q 043388 80 FPRW--ICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSL-------------KNLWWLNLEQNNLGMGTAS 144 (854)
Q Consensus 80 ~p~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l-------------~~L~~L~L~~N~l~~~~~~ 144 (854)
.|.. |+++++|++|+|++|.+++..+...|.++++|++|++++|.+ .+|+.|+|+.|.+. +
T Consensus 113 ~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~----~ 188 (844)
T 3j0a_A 113 VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLY----S 188 (844)
T ss_dssp CSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSC----C
T ss_pred cccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccc----c
Confidence 5544 778888888888888887444445678888888888887765 46777777777774 2
Q ss_pred CCCccccCCCC------CCEEecCCCcCcccCCcCcccc--------------------------------------CCC
Q 043388 145 SIPDSLSNASN------LERLDLSGNQFKGKVSIDFSSL--------------------------------------KNL 180 (854)
Q Consensus 145 ~~p~~~~~l~~------L~~L~Ls~N~i~~~~~~~f~~l--------------------------------------~~L 180 (854)
..|..+..+++ |++|+|++|++++..+..|... ++|
T Consensus 189 ~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L 268 (844)
T 3j0a_A 189 RVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSV 268 (844)
T ss_dssp CCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCC
T ss_pred ccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCc
Confidence 33444444443 7777777776665444433221 456
Q ss_pred CeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCC
Q 043388 181 WWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLI 260 (854)
Q Consensus 181 ~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 260 (854)
+.|+|++|.+..+... .|..+++|+.|+|++|++++..|..|..+. .|+.|++++|.+++..|..|.++++|+
T Consensus 269 ~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 341 (844)
T 3j0a_A 269 RHLDLSHGFVFSLNSR------VFETLKDLKVLNLAYNKINKIADEAFYGLD-NLQVLNLSYNLLGELYSSNFYGLPKVA 341 (844)
T ss_dssp CEEECTTCCCCEECSC------CSSSCCCCCEEEEESCCCCEECTTTTTTCS-SCCEEEEESCCCSCCCSCSCSSCTTCC
T ss_pred cEEECCCCcccccChh------hhhcCCCCCEEECCCCcCCCCChHHhcCCC-CCCEEECCCCCCCccCHHHhcCCCCCC
Confidence 6666666666544332 455666666666666666655566666654 566666666666666666666666666
Q ss_pred eeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCC-----------------
Q 043388 261 ALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPS----------------- 323 (854)
Q Consensus 261 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----------------- 323 (854)
.|++++|+++++.+..|..+++|++|+|++|.+++. + .+++|+.|++++|+++ .+|.
T Consensus 342 ~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~-~l~~~~~~l~~L~ls~N~l~~ 415 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLV-TLPKINLTANLIHLSENRLEN 415 (844)
T ss_dssp EEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCC-CCCCCCTTCCEEECCSCCCCS
T ss_pred EEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcc-cccccccccceeecccCcccc
Confidence 666666666666666666666666666666666532 1 1344444444444444 2222
Q ss_pred -----CCcCCCCCcccccCCCcccCccchh-hcchhhhHHHHHhhcCCCCCCc-----Cccccccccccccccccceeec
Q 043388 324 -----SLGNCQNLKGFDASHNKLTGAIPQQ-VLSITTLSVYLALAHNLLNDSL-----PLQVGNLKNLVITCVSLEYLDI 392 (854)
Q Consensus 324 -----~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~l~~~l~l~~n~l~~~~-----p~~~~~l~~l~~~~~~L~~L~L 392 (854)
.+.++++|+.|++++|++++..+.. +.....+. .|++++|.+.... +..+.+ +++|+.|+|
T Consensus 416 l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~-~L~Ls~N~l~~~~~~~~~~~~~~~-------l~~L~~L~L 487 (844)
T 3j0a_A 416 LDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLE-QLFLGENMLQLAWETELCWDVFEG-------LSHLQVLYL 487 (844)
T ss_dssp STTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCC-BCEEESCCCSSSCCSCCCSSCSSC-------BCCEECCCC
T ss_pred CchhhhhhcCCccceeeCCCCcccccccccccccCCccc-cccCCCCccccccccccchhhhcC-------cccccEEEC
Confidence 1336777888888888877543332 22333443 3788888876333 233444 567999999
Q ss_pred cCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCCccccCcccccccccccccCC
Q 043388 393 SSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFSNKTKISLQVNVKLCGG 472 (854)
Q Consensus 393 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~ 472 (854)
++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|++++..|.. |.....+.+.+|++.|.+
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSS
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccc
Confidence 99999999999999999999999999999987777776 89999999999999998864 678888999999999976
Q ss_pred c
Q 043388 473 I 473 (854)
Q Consensus 473 ~ 473 (854)
.
T Consensus 564 ~ 564 (844)
T 3j0a_A 564 E 564 (844)
T ss_dssp S
T ss_pred c
Confidence 5
No 12
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.8e-50 Score=474.82 Aligned_cols=430 Identities=20% Similarity=0.172 Sum_probs=382.9
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
+|+|++..|..|+.+++|++|+|++|++++..|..|+.+++|++|++++|++++..|..|+.+++|++|+|++|+++++.
T Consensus 66 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 145 (606)
T 3t6q_A 66 RCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIK 145 (606)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCC
T ss_pred CCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccC
Confidence 48899999999999999999999999999888999999999999999999999877899999999999999999999866
Q ss_pred hhhhcCCCCCceeeecccccccccCcccccCCCCCc--EEEcccCCCC--------------------------------
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLK--ELYLTFCSLK-------------------------------- 126 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~--~L~l~~n~l~-------------------------------- 126 (854)
+..+..+++|++|+|++|+++ .++...|..+++|+ +|++++|.+.
T Consensus 146 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~ 224 (606)
T 3t6q_A 146 LPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKN 224 (606)
T ss_dssp CCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTT
T ss_pred cccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccc
Confidence 556666999999999999998 77778889999999 8888887653
Q ss_pred ------------------------------CCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 127 ------------------------------NLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 127 ------------------------------~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+.|++++|.+. ...+..|.++++|++|+|++|+++. .|..|..
T Consensus 225 ~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~-lp~~l~~ 299 (606)
T 3t6q_A 225 STIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF----NISSNTFHCFSGLQELDLTATHLSE-LPSGLVG 299 (606)
T ss_dssp CEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCS----SCCTTTTTTCTTCSEEECTTSCCSC-CCSSCCS
T ss_pred cchhheechhhccccccccChhHhchhhcCceeEEEeecCccC----ccCHHHhccccCCCEEeccCCccCC-CChhhcc
Confidence 5677888888883 2334559999999999999999994 5667999
Q ss_pred cCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChh-hhhhcccccEEEccCCcccccC--Cccc
Q 043388 177 LKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHS-IANLSSTMIQFRIGGNQISGTI--PSGI 253 (854)
Q Consensus 177 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~~L~~L~l~~N~l~~~~--~~~~ 253 (854)
+++|++|++++|.+..+.. ..+..+++|++|++++|.+.+.+|.. +..++ .|+.|++++|.+++.. +..+
T Consensus 300 l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~ 372 (606)
T 3t6q_A 300 LSTLKKLVLSANKFENLCQ------ISASNFPSLTHLSIKGNTKRLELGTGCLENLE-NLRELDLSHDDIETSDCCNLQL 372 (606)
T ss_dssp CTTCCEEECTTCCCSBGGG------GCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT-TCCEEECCSSCCCEEEESTTTT
T ss_pred cccCCEEECccCCcCcCch------hhhhccCcCCEEECCCCCcccccchhhhhccC-cCCEEECCCCccccccCcchhc
Confidence 9999999999999986543 35788999999999999999777765 66665 8999999999999876 8889
Q ss_pred cccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCcc-ccCccccchhccccceecccCCCCCcCCCCCc
Q 043388 254 RNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPS-LGNLTKLADLALSFNNLQGNIPSSLGNCQNLK 332 (854)
Q Consensus 254 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 332 (854)
.++++|++|++++|++++..|..|..+++|++|++++|++.+..|.. +..+++|+.|++++|.+++..|..+..+++|+
T Consensus 373 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 452 (606)
T 3t6q_A 373 RNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQ 452 (606)
T ss_dssp TTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCC
T ss_pred ccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999876654 99999999999999999998999999999999
Q ss_pred ccccCCCcccCcc---chhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCC
Q 043388 333 GFDASHNKLTGAI---PQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMK 409 (854)
Q Consensus 333 ~L~ls~N~l~~~~---p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 409 (854)
.|++++|++++.. +..+..+..+.. +++++|.+.+..|..++. +++|++|+|++|++++.+|..|..++
T Consensus 453 ~L~L~~n~l~~~~~~~~~~~~~l~~L~~-L~Ls~n~l~~~~~~~~~~-------l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 453 HLNLQGNHFPKGNIQKTNSLQTLGRLEI-LVLSFCDLSSIDQHAFTS-------LKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp EEECTTCBCGGGEECSSCGGGGCTTCCE-EECTTSCCCEECTTTTTT-------CTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred EEECCCCCCCccccccchhhccCCCccE-EECCCCccCccChhhhcc-------ccCCCEEECCCCccCcCChhHhCccc
Confidence 9999999998632 244666666655 999999999988888887 56799999999999999999999999
Q ss_pred CCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCC
Q 043388 410 SIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTK 452 (854)
Q Consensus 410 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 452 (854)
.| +|+|++|++++.+|..+..+++|+.|++++|+++|.++..
T Consensus 525 ~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~ 566 (606)
T 3t6q_A 525 GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNI 566 (606)
T ss_dssp SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGH
T ss_pred cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcH
Confidence 99 9999999999999999999999999999999999988754
No 13
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=6e-51 Score=423.67 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=196.2
Q ss_pred ccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 550 FASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 550 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
|+..++||+|+||+||+|.+..+++.||+|++.... ....+.+.+|++++++++|||||+++++|.+.. .+....||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEE
Confidence 356678999999999999999999999999997543 234567999999999999999999999986532 12236899
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC-Cccccc-ccccc
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHQ-NFSLS 705 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~~~-Dfg~~ 705 (854)
|||||+||+|.+++.... .+++.+++.|+.||+.||+|||++ .++||||||||+|||++. ++.+++ |||+|
T Consensus 107 vmEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence 999999999999998764 789999999999999999999998 113999999999999974 555555 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
+..... .....+||+.|||||++.+ .|+.++|||||||++|||+||+.||..................+....
T Consensus 180 ~~~~~~-----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~- 252 (290)
T 3fpq_A 180 TLKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD- 252 (290)
T ss_dssp GGCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGG-
T ss_pred EeCCCC-----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCC-
Confidence 754332 2234679999999998865 699999999999999999999999975322111111111111110000
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..+++++.+++.+||+.||++|||++|+++
T Consensus 253 -------------------------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 -------------------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -------------------------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -------------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011345778999999999999999999875
No 14
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.5e-51 Score=435.39 Aligned_cols=251 Identities=19% Similarity=0.278 Sum_probs=200.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++|||||++++++.+.+ .
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-----~ 97 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG-----S 97 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-----E
Confidence 368999999999999999999999999999999997543 234567899999999999999999999998765 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.|||||||+||+|.+++...+.. .+++.+++.|+.||+.||+|||++ +||||||||+|||++.++..++ |||
T Consensus 98 ~yiVmEy~~gg~L~~~i~~~~~~----~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 98 LYIVMDYCEGGDLFKRINAQKGV----LFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTT
T ss_pred EEEEEeCCCCCcHHHHHHHcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccc
Confidence 89999999999999999765422 678999999999999999999999 9999999999999999887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
+|+....... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... ..+........+.
T Consensus 171 la~~~~~~~~---~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~-- 244 (350)
T 4b9d_A 171 IARVLNSTVE---LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSFPP-- 244 (350)
T ss_dssp EESCCCHHHH---HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCC--
T ss_pred cceeecCCcc---cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCC--
Confidence 9987654321 112357999999999999999999999999999999999999999754221 1111122211110
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. ..++.++.+++.+||+.||++|||++|+++
T Consensus 245 ---~~----------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 ---VS----------------------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ---CC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CC----------------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 112455789999999999999999999986
No 15
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.3e-50 Score=468.82 Aligned_cols=444 Identities=20% Similarity=0.175 Sum_probs=351.8
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
+|+|++..|..|+++++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+.+++|++|+|++|+++++.
T Consensus 41 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 120 (606)
T 3vq2_A 41 FNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLE 120 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSS
T ss_pred CCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccc
Confidence 46777777778888888888888888888777777888888888888888888777888888888888888888888777
Q ss_pred hhhhcCCCCCceeeeccccccc-ccCcccccCCCCCcEEEcccCCCCC---------------CceeeccCccCCCCCCC
Q 043388 81 PRWICNISSLEFIYLTVNRFSG-SLPFDILVNLPNLKELYLTFCSLKN---------------LWWLNLEQNNLGMGTAS 144 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~~l~~L~~L~l~~n~l~~---------------L~~L~L~~N~l~~~~~~ 144 (854)
|..|+++++|++|+|++|++++ .+| ..|.++++|++|++++|+++. +..|++++|.+.
T Consensus 121 ~~~~~~l~~L~~L~L~~n~l~~~~lp-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~----- 194 (606)
T 3vq2_A 121 SFPIGQLITLKKLNVAHNFIHSCKLP-AYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPID----- 194 (606)
T ss_dssp SSCCTTCTTCCEEECCSSCCCCCCCC-GGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCC-----
T ss_pred ccccCCCCCCCEEeCCCCcccceech-HhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcc-----
Confidence 7778888888888888888763 234 457788888888888776642 236778888773
Q ss_pred CCCccccCCCCCCEEecCCCcCc---------------------------------------------------------
Q 043388 145 SIPDSLSNASNLERLDLSGNQFK--------------------------------------------------------- 167 (854)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~i~--------------------------------------------------------- 167 (854)
.+|.......+|++|+|++|.++
T Consensus 195 ~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~ 274 (606)
T 3vq2_A 195 FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDF 274 (606)
T ss_dssp EECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTC
T ss_pred eeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccc
Confidence 34444333446777777776553
Q ss_pred -ccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCccc
Q 043388 168 -GKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQIS 246 (854)
Q Consensus 168 -~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~ 246 (854)
+..+. |..+++|+.|++++|.+..++ .+..+++|++|++++|.+ +.+| .+ .++ .|+.|++++|...
T Consensus 275 ~~~~~~-~~~l~~L~~L~l~~~~~~~l~--------~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~-~L~~L~l~~n~~~ 341 (606)
T 3vq2_A 275 SDDIVK-FHCLANVSAMSLAGVSIKYLE--------DVPKHFKWQSLSIIRCQL-KQFP-TL-DLP-FLKSLTLTMNKGS 341 (606)
T ss_dssp CGGGGS-CGGGTTCSEEEEESCCCCCCC--------CCCTTCCCSEEEEESCCC-SSCC-CC-CCS-SCCEEEEESCSSC
T ss_pred cccccc-cccCCCCCEEEecCccchhhh--------hccccccCCEEEcccccC-cccc-cC-CCC-ccceeeccCCcCc
Confidence 22222 666777888888888776544 367788899999999998 4788 44 554 7899999999655
Q ss_pred ccCCccccccccCCeeeccccccccC--CCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCC-C
Q 043388 247 GTIPSGIRNLVNLIALTIEVNQLHGI--IPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIP-S 323 (854)
Q Consensus 247 ~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~ 323 (854)
+.. .+..+++|++|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| .
T Consensus 342 ~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 418 (606)
T 3vq2_A 342 ISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFS 418 (606)
T ss_dssp EEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTT
T ss_pred cch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChh
Confidence 443 677899999999999999876 37888999999999999999984 66889999999999999999998777 6
Q ss_pred CCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCC-CcCccccccccccccccccceeeccCcccccCCC
Q 043388 324 SLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLND-SLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIP 402 (854)
Q Consensus 324 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~-~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p 402 (854)
.+..+++|+.|++++|.+++..|..+..+..+.. +++++|.+.+ .+|..++. +.+|++|+|++|++++.+|
T Consensus 419 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~~-------l~~L~~L~Ls~n~l~~~~~ 490 (606)
T 3vq2_A 419 AFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT-LKMAGNSFKDNTLSNVFAN-------TTNLTFLDLSKCQLEQISW 490 (606)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE-EECTTCEEGGGEECSCCTT-------CTTCCEEECTTSCCCEECT
T ss_pred hhhccccCCEEECcCCCCCccchhhhcCCCCCCE-EECCCCcCCCcchHHhhcc-------CCCCCEEECCCCcCCccCh
Confidence 8899999999999999999888888888877765 8999999987 46777777 5679999999999999999
Q ss_pred cccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCCcccc-CcccccccccccccCCcc
Q 043388 403 FSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFS-NKTKISLQVNVKLCGGID 474 (854)
Q Consensus 403 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~-~~~~~~~~~n~~~c~~~~ 474 (854)
..|+.+++|++|+|++|++++.+|..|.++++|+.|+|++|+++...+....+. +...+.+.+|++.|.++.
T Consensus 491 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 491 GVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred hhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999999999999999889999999999999999999995443333343 467788999999987654
No 16
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6.8e-51 Score=424.76 Aligned_cols=248 Identities=21% Similarity=0.339 Sum_probs=206.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++|++.++||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||++++++.+.+ .
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE-----K 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 5899999999999999999999999999999999743 3445678999999999999999999999998765 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.|+|||||+||+|.+++...+ .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++..++ |||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 899999999999999998765 789999999999999999999999 9999999999999999887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
+|+.+....... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... ..+.......+ .+
T Consensus 178 la~~~~~~~~~~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~--~~ 253 (311)
T 4aw0_A 178 TAKVLSPESKQA-RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEY--DF 253 (311)
T ss_dssp TCEECCTTTTCC-CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC--CC
T ss_pred CceecCCCCCcc-cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC--CC
Confidence 999876443221 223468999999999999999999999999999999999999999754211 11111111111 00
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVV 839 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 839 (854)
. +.++.++.+++.+||+.||++|||++|+.
T Consensus 254 p--------------------------~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 P--------------------------EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp C--------------------------TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred C--------------------------cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 0 01134577899999999999999999874
No 17
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-50 Score=425.60 Aligned_cols=273 Identities=25% Similarity=0.323 Sum_probs=203.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
++|.+.++||+|+||+||+|++. |+.||||+++..... ...+.+|+..+.+++|||||+++++|.+.+. .....||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET--TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC--CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCC-CceEEEE
Confidence 56888899999999999999984 788999999654321 1223345555678899999999999976542 2235799
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeecCCCCceEecCCccccc-c
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC-----QPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
|||||++|+|.++++.. .++|.++.+|+.|+|.||+|||+++ .++||||||||+|||++.++.+++ |
T Consensus 79 V~Ey~~~gsL~~~l~~~-------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 99999999999999764 6899999999999999999999862 458999999999999999988887 9
Q ss_pred cccccccccCCCCC-CcccccCCcccccCccccCCC------CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchH---
Q 043388 702 FSLSHQLDSASKTP-SSSIGIKGTVGYVAPEYGMGS------EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTL--- 771 (854)
Q Consensus 702 fg~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~--- 771 (854)
||+|+......... ......+||+.|||||++.+. .++.++|||||||++|||+||++||.........+
T Consensus 152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~ 231 (303)
T 3hmm_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTT
T ss_pred CCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhc
Confidence 99998876544322 122345799999999998764 36789999999999999999998876433221111
Q ss_pred -------hHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHh
Q 043388 772 -------HEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCH 844 (854)
Q Consensus 772 -------~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 844 (854)
.+.......+.. +|.+ .......+++..+.+++.+||+.||++||||.||++.|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~----rp~~-------------p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 232 VPSDPSVEEMRKVVCEQKL----RPNI-------------PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp SCSSCCHHHHHHHHTTSCC----CCCC-------------CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred ccccchHHHHHHHHhcccC----CCCC-------------CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111111111100 0100 0011122456778999999999999999999999999999
Q ss_pred hhhh
Q 043388 845 TRET 848 (854)
Q Consensus 845 ~~~~ 848 (854)
+.+.
T Consensus 295 l~~~ 298 (303)
T 3hmm_A 295 LSQQ 298 (303)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8764
No 18
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.7e-50 Score=436.34 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=207.6
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
..|++.++||+|+||.||+|++..+|+.||||+++.......+.+.+|+.+|++++|||||+++++|.+.+ ..||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-----EEEE
Confidence 46999999999999999999999999999999998776666678999999999999999999999998765 7899
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccc
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSH 706 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~ 706 (854)
|||||+||+|.+++... .+++.++..|+.||+.||+|||++ +||||||||+|||++.++..++ |||+|+
T Consensus 226 VmEy~~gG~L~~~i~~~-------~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHT-------RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEECCTTEEHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 99999999999999753 689999999999999999999999 9999999999999999887776 999999
Q ss_pred ccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccc
Q 043388 707 QLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEI 786 (854)
Q Consensus 707 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (854)
.+...... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+....+....
T Consensus 296 ~~~~~~~~---~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~~~-- 368 (423)
T 4fie_A 296 QVSKEVPR---RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPRLK-- 368 (423)
T ss_dssp ECCSSCCC---BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCCCS--
T ss_pred ECCCCCcc---ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCCCc--
Confidence 87654322 22357999999999999999999999999999999999999999753211 111111111111100
Q ss_pred cCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 787 VDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 787 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
....++.++.+++.+||+.||++|||+.|+++
T Consensus 369 ----------------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 369 ----------------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ----------------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00112455789999999999999999999976
No 19
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9.2e-49 Score=466.68 Aligned_cols=431 Identities=23% Similarity=0.245 Sum_probs=333.0
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
.|++++..|..|+++++|++|+|++|.+++..+.+|+.+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..
T Consensus 58 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 137 (680)
T 1ziw_A 58 FNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTK 137 (680)
T ss_dssp SSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccC
Confidence 36777777778888888888888888887544456778888888888888887666677777788888888888777777
Q ss_pred hhhhcCCCCCceeeecccccccccCccccc--CCCCCcEEEccc------------------------------------
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILV--NLPNLKELYLTF------------------------------------ 122 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--~l~~L~~L~l~~------------------------------------ 122 (854)
|..|.++++|++|+|++|+++ .++...|. .+++|++|++++
T Consensus 138 ~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~ 216 (680)
T 1ziw_A 138 LGTQVQLENLQELLLSNNKIQ-ALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLC 216 (680)
T ss_dssp CCSSSCCTTCCEEECCSSCCC-CBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHH
T ss_pred chhhcccccCCEEEccCCccc-ccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHH
Confidence 777777777777777777766 33333222 223444444433
Q ss_pred ---------------CCC-------------CCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCc
Q 043388 123 ---------------CSL-------------KNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDF 174 (854)
Q Consensus 123 ---------------n~l-------------~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f 174 (854)
|++ ++|+.|+|++|++. +..|..|.++++|++|+|++|+++++.+..|
T Consensus 217 ~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~----~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (680)
T 1ziw_A 217 LELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLN----VVGNDSFAWLPQLEYFFLEYNNIQHLFSHSL 292 (680)
T ss_dssp HHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCC----EECTTTTTTCTTCCEEECCSCCBSEECTTTT
T ss_pred HHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcC----ccCcccccCcccccEeeCCCCccCccChhhh
Confidence 322 12677777777763 2234567778888888888888877666544
Q ss_pred cc---------------------------------cCCCCeEecccccccCCCCCChhhhhhccCC--------------
Q 043388 175 SS---------------------------------LKNLWWLNLEQNNLGMGTANDLDFVTLLTNC-------------- 207 (854)
Q Consensus 175 ~~---------------------------------l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l-------------- 207 (854)
.+ +++|++|++++|.+..+... .|.++
T Consensus 293 ~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls~n~~~ 366 (680)
T 1ziw_A 293 HGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSN------MFTGLINLKYLSLSNSFTS 366 (680)
T ss_dssp TTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTT------TTTTCTTCCEEECTTCBSC
T ss_pred cCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChh------HhccccCCcEEECCCCchh
Confidence 44 44444555555555444332 23333
Q ss_pred --------------CCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCC-ccccccccCCeeeccccccccC
Q 043388 208 --------------SSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIP-SGIRNLVNLIALTIEVNQLHGI 272 (854)
Q Consensus 208 --------------~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 272 (854)
++|+.|++++|++++..|..+..+. .|+.|++++|.+++.+| ..|.++++|++|++++|+++++
T Consensus 367 ~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 445 (680)
T 1ziw_A 367 LRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG-HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQL 445 (680)
T ss_dssp CCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEEC
T ss_pred hhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC-CCCEEeCCCCcCccccCcccccCcccccEEecCCCCccee
Confidence 3566666677778877788888876 89999999999998666 7899999999999999999999
Q ss_pred CCCCccCcccCceeeCcccccc--ccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccch---
Q 043388 273 IPDGVGELQHLQQLYMFRNFLQ--GSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQ--- 347 (854)
Q Consensus 273 ~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~--- 347 (854)
.+..|..+++|+.|++++|.+. +.+|..|..+++|+.|+|++|++++..+..|.++++|+.|++++|++++..+.
T Consensus 446 ~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 525 (680)
T 1ziw_A 446 TRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANP 525 (680)
T ss_dssp CTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTST
T ss_pred ChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhcc
Confidence 9999999999999999999987 57899999999999999999999988888999999999999999999853221
Q ss_pred -----hhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccc
Q 043388 348 -----QVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLS 422 (854)
Q Consensus 348 -----~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 422 (854)
.+..+..+.. +++++|.+....+..+++ +.+|+.|+|++|++++.++..|..+++|+.|+|++|+|+
T Consensus 526 ~~~~~~~~~l~~L~~-L~L~~N~l~~i~~~~~~~-------l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 597 (680)
T 1ziw_A 526 GGPIYFLKGLSHLHI-LNLESNGFDEIPVEVFKD-------LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLIT 597 (680)
T ss_dssp TSCCCTTTTCTTCCE-EECCSSCCCCCCTTTTTT-------CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred CCcchhhcCCCCCCE-EECCCCCCCCCCHHHccc-------ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCC
Confidence 2455566654 999999998655556777 567999999999999888888999999999999999999
Q ss_pred cccchhhc-CccCCCeeecccccCcccCCC
Q 043388 423 GQIPEFLQ-NLSFLEFLNLSYNHLEGEVPT 451 (854)
Q Consensus 423 ~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~ 451 (854)
+..|..+. .+++|+.|++++|+|.|.++.
T Consensus 598 ~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 598 SVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp BCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred ccChhHhcccccccCEEEccCCCcccCCcc
Confidence 98888888 799999999999999999885
No 20
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8e-50 Score=411.28 Aligned_cols=246 Identities=26% Similarity=0.367 Sum_probs=188.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|++.+.||+|+||+||+|++..+++.||||+++.. .....+.+.+|++++++++|||||++++++.+.+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~----- 86 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD----- 86 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----
Confidence 47899999999999999999999999999999999643 2334567999999999999999999999998765
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..|+||||| +|+|.+++...+ .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++..++ ||
T Consensus 87 ~~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 87 EIIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp EEEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCS
T ss_pred EEEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeec
Confidence 789999999 679999998765 789999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|+|+........ ...+||+.|||||++.+..+ +.++||||+||++|||+||+.||...... ...........
T Consensus 157 Gla~~~~~~~~~----~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-~~~~~i~~~~~-- 229 (275)
T 3hyh_A 157 GLSNIMTDGNFL----KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-VLFKNISNGVY-- 229 (275)
T ss_dssp SCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC--
T ss_pred CCCeecCCCCcc----CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCC--
Confidence 999876543322 23579999999999998775 68999999999999999999999753211 11111111100
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
... ..+++++.+++.+||+.||++|||++|+++
T Consensus 230 ~~p--------------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 TLP--------------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCC--------------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCC--------------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 000 112445778999999999999999999987
No 21
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.6e-50 Score=428.12 Aligned_cols=268 Identities=22% Similarity=0.332 Sum_probs=212.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCC-----ceEEEEEEeecccc-cchHHHHHHHHHHHhccC-CCeeeEEEEeeccCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGE-----EMIVAVKVINLKQK-GAFRSFVAECEALRNIRH-RNLIKIITICSSIDS 619 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~ 619 (854)
.++|++.+.||+|+||+||+|++.+. ++.||||+++.... ...+.+.+|+++|.+++| ||||+++|+|...+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 47899999999999999999998643 46899999975432 345679999999999965 899999999865431
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCc----------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCc
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSN 689 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~N 689 (854)
..+||||||++|+|.++|+..... .....+++.+++.|+.|||+||+|||++ +||||||||+|
T Consensus 143 ----~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~N 215 (353)
T 4ase_A 143 ----PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 215 (353)
T ss_dssp ----CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred ----EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccc
Confidence 479999999999999999865321 0123589999999999999999999999 99999999999
Q ss_pred eEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccC
Q 043388 690 VLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTE 767 (854)
Q Consensus 690 Ill~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~ 767 (854)
||+++++.+|+ |||+|+......... .....+||+.|||||++.+..|+.++|||||||++|||+| |+.||......
T Consensus 216 ILl~~~~~vKi~DFGlar~~~~~~~~~-~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~ 294 (353)
T 4ase_A 216 ILLSEKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294 (353)
T ss_dssp EEECGGGCEEECCCGGGSCTTTCTTSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred eeeCCCCCEEECcchhhhhcccCCCce-eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH
Confidence 99999988887 999998775543221 2223568999999999999999999999999999999998 99999764322
Q ss_pred CchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhh
Q 043388 768 GLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRE 847 (854)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 847 (854)
. .+...+..... ...++.++.++.+++.+||+.||++||||.||++.|+++.+
T Consensus 295 ~-~~~~~i~~g~~--------------------------~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 295 E-EFCRRLKEGTR--------------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp H-HHHHHHHHTCC--------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-HHHHHHHcCCC--------------------------CCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 1 12221111110 01112235668899999999999999999999999999876
Q ss_pred hh
Q 043388 848 TF 849 (854)
Q Consensus 848 ~~ 849 (854)
.-
T Consensus 348 ~~ 349 (353)
T 4ase_A 348 AN 349 (353)
T ss_dssp HT
T ss_pred Hh
Confidence 53
No 22
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-48 Score=459.26 Aligned_cols=427 Identities=19% Similarity=0.181 Sum_probs=374.5
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcc-c
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSG-M 79 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~ 79 (854)
+|+|++..|..|+++++|++|+|++|.+++..|.+|+.+++|++|+|++|++++..+..|+.+++|++|+|++|.+++ .
T Consensus 65 ~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 144 (606)
T 3vq2_A 65 RCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK 144 (606)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCccccee
Confidence 488999999999999999999999999998889999999999999999999998888999999999999999999986 4
Q ss_pred ChhhhcCCCCCceeeecccccccccCcccccCCCCCc----EEEcccCCCC----------CCceeeccCccCCC-----
Q 043388 80 FPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLK----ELYLTFCSLK----------NLWWLNLEQNNLGM----- 140 (854)
Q Consensus 80 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~----~L~l~~n~l~----------~L~~L~L~~N~l~~----- 140 (854)
+|..|+++++|++|+|++|+++ .++...|..+++|+ +|+++.|.++ +|+.|++++|.+..
T Consensus 145 lp~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~ 223 (606)
T 3vq2_A 145 LPAYFSNLTNLVHVDLSYNYIQ-TITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKT 223 (606)
T ss_dssp CCGGGGTCTTCCEEECCSSCCC-EECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHH
T ss_pred chHhHhhcCCCCEEEccCCcce-ecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHH
Confidence 6999999999999999999999 67666677776655 7999888765 67888888887630
Q ss_pred -------------------------------------------------CCCCCCCccccCCCCCCEEecCCCcCcccCC
Q 043388 141 -------------------------------------------------GTASSIPDSLSNASNLERLDLSGNQFKGKVS 171 (854)
Q Consensus 141 -------------------------------------------------~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~ 171 (854)
...+.+|. +..+++|+.|++++|.+..++
T Consensus 224 ~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~- 301 (606)
T 3vq2_A 224 CLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE- 301 (606)
T ss_dssp HHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC-
T ss_pred HhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhhh-
Confidence 00122333 788899999999999998665
Q ss_pred cCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCccccc--C
Q 043388 172 IDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGT--I 249 (854)
Q Consensus 172 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~--~ 249 (854)
.+..+++|++|++++|.++.++ .+ .+++|++|++++|...+.+ .+..++ .|+.|++++|.+++. .
T Consensus 302 -~l~~~~~L~~L~l~~n~l~~lp--------~~-~l~~L~~L~l~~n~~~~~~--~~~~l~-~L~~L~ls~n~l~~~~~~ 368 (606)
T 3vq2_A 302 -DVPKHFKWQSLSIIRCQLKQFP--------TL-DLPFLKSLTLTMNKGSISF--KKVALP-SLSYLDLSRNALSFSGCC 368 (606)
T ss_dssp -CCCTTCCCSEEEEESCCCSSCC--------CC-CCSSCCEEEEESCSSCEEC--CCCCCT-TCCEEECCSSCEEEEEEC
T ss_pred -hccccccCCEEEcccccCcccc--------cC-CCCccceeeccCCcCccch--hhccCC-CCCEEECcCCccCCCcch
Confidence 8999999999999999996554 24 8899999999999766444 455665 799999999999977 4
Q ss_pred CccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCC-ccccCccccchhccccceecccCCCCCcCC
Q 043388 250 PSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIP-PSLGNLTKLADLALSFNNLQGNIPSSLGNC 328 (854)
Q Consensus 250 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 328 (854)
|..+..+++|++|++++|++++ .|..|..+++|+.|++++|++.+..| ..+..+++|+.|++++|.+++..|..+..+
T Consensus 369 ~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 447 (606)
T 3vq2_A 369 SYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGL 447 (606)
T ss_dssp CHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTC
T ss_pred hhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCC
Confidence 8889999999999999999996 45889999999999999999998877 689999999999999999999999999999
Q ss_pred CCCcccccCCCcccCc-cchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCccccc
Q 043388 329 QNLKGFDASHNKLTGA-IPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGF 407 (854)
Q Consensus 329 ~~L~~L~ls~N~l~~~-~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 407 (854)
++|+.|++++|++++. +|..+..+..+.. +++++|.+.+..|..++. +.+|++|+|++|++++.+|..|..
T Consensus 448 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~-L~Ls~n~l~~~~~~~~~~-------l~~L~~L~Ls~N~l~~~~~~~~~~ 519 (606)
T 3vq2_A 448 TSLNTLKMAGNSFKDNTLSNVFANTTNLTF-LDLSKCQLEQISWGVFDT-------LHRLQLLNMSHNNLLFLDSSHYNQ 519 (606)
T ss_dssp TTCCEEECTTCEEGGGEECSCCTTCTTCCE-EECTTSCCCEECTTTTTT-------CTTCCEEECCSSCCSCEEGGGTTT
T ss_pred CCCCEEECCCCcCCCcchHHhhccCCCCCE-EECCCCcCCccChhhhcc-------cccCCEEECCCCcCCCcCHHHccC
Confidence 9999999999999974 6777777877766 999999999988888887 567999999999999999999999
Q ss_pred CCCCCEEEccCcccccccchhhcCcc-CCCeeecccccCcccCCCCc
Q 043388 408 MKSIKELNVSSNNLSGQIPEFLQNLS-FLEFLNLSYNHLEGEVPTKG 453 (854)
Q Consensus 408 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~~p~~~ 453 (854)
+++|++|+|++|+|+ .+|..+..++ +|+.|++++|++.|.++..+
T Consensus 520 l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 520 LYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp CTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHH
T ss_pred CCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHH
Confidence 999999999999999 6777799997 59999999999999888654
No 23
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.3e-49 Score=411.51 Aligned_cols=258 Identities=22% Similarity=0.357 Sum_probs=191.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC-----
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSK----- 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~----- 620 (854)
.++|++.+.||+|+||+||+|+++.+++.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+..
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 5689999999999999999999999999999999975443 3346789999999999999999999998765421
Q ss_pred --CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccc
Q 043388 621 --GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 698 (854)
Q Consensus 621 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 698 (854)
...+.|+|||||++|+|.+++...... ...++..++.|+.||+.||+|||++ +||||||||+|||++.++..
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~v 157 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVV 157 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcE
Confidence 123479999999999999999876432 1456777889999999999999999 99999999999999998877
Q ss_pred cc-ccccccccccCCCCC---------CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC
Q 043388 699 HQ-NFSLSHQLDSASKTP---------SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG 768 (854)
Q Consensus 699 ~~-Dfg~~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~ 768 (854)
++ |||+|+......... ....+.+||+.|||||++.+..|+.++|||||||++|||++ ||.......
T Consensus 158 Kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~ 234 (299)
T 4g31_A 158 KVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERV 234 (299)
T ss_dssp EECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH
T ss_pred EEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHH
Confidence 76 999999876543221 12234579999999999999999999999999999999996 775321110
Q ss_pred chHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 769 LTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..+........ ++......+...+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~---------------------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLTDVRNLKF---------------------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHTTCC---------------------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcCCC---------------------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111000000 0111222344668999999999999999999987
No 24
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.7e-49 Score=414.53 Aligned_cols=242 Identities=25% Similarity=0.308 Sum_probs=190.4
Q ss_pred hhccccCccCCCcceEEEEeEEC---CCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILG---GEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
++|++.+.||+|+||+||+|+.. .+++.||||+++... ......+.+|++++++++|||||++++++.+.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 58999999999999999999884 467899999996432 223456889999999999999999999998765
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..|+|||||+||+|.+++...+ .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++..++ |
T Consensus 100 -~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 100 -KLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp -EEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred -EEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 7899999999999999998765 789999999999999999999999 9999999999999999887776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||+|+........ ....+||+.|||||++.+..|+.++||||+||++|||+||+.||...... ..+.........
T Consensus 170 FGla~~~~~~~~~---~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~- 244 (304)
T 3ubd_A 170 FGLSKESIDHEKK---AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKAKLG- 244 (304)
T ss_dssp SEEEEC-----CC---CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC-
T ss_pred cccceeccCCCcc---ccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HHHHHHHcCCCC-
Confidence 9999876443322 22357999999999999999999999999999999999999999754221 111111111100
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM 835 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 835 (854)
. +..++.++.+++.+||+.||++|||+
T Consensus 245 -~--------------------------p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 -M--------------------------PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -C--------------------------CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -C--------------------------CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 0 01124557889999999999999985
No 25
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-48 Score=469.67 Aligned_cols=425 Identities=22% Similarity=0.215 Sum_probs=354.3
Q ss_pred CcccccC-chhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcC--ccCCCCCcEEecccccCcc
Q 043388 2 NKLEGQI-PEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTT--LGLLRNLVYLNVAENQFSG 78 (854)
Q Consensus 2 n~~~~~~-p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~ 78 (854)
|++.+.+ |..|+++++|++|+|++|.|++..|.+|+.+++|++|+|++|.+++.+|.. |+.+++|++|+|++|.+++
T Consensus 58 n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~ 137 (844)
T 3j0a_A 58 QYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRS 137 (844)
T ss_dssp TCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCC
T ss_pred CCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccc
Confidence 4455566 789999999999999999999888999999999999999999999866665 9999999999999999998
Q ss_pred cCh-hhhcCCCCCceeeecccccccccCcccccCC--CCCcEEEcccCCCCC-----------------CceeeccCccC
Q 043388 79 MFP-RWICNISSLEFIYLTVNRFSGSLPFDILVNL--PNLKELYLTFCSLKN-----------------LWWLNLEQNNL 138 (854)
Q Consensus 79 ~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l--~~L~~L~l~~n~l~~-----------------L~~L~L~~N~l 138 (854)
..+ ..|+++++|++|+|++|.++ .+....|..+ ++|+.|+++.|.+.. |+.|+|++|.+
T Consensus 138 ~~~~~~~~~L~~L~~L~Ls~N~i~-~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 216 (844)
T 3j0a_A 138 LYLHPSFGKLNSLKSIDFSSNQIF-LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGW 216 (844)
T ss_dssp CCCCGGGGTCSSCCEEEEESSCCC-CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCS
T ss_pred cccchhHhhCCCCCEEECCCCcCC-eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcC
Confidence 765 68999999999999999998 5555567777 899999999887643 89999999987
Q ss_pred CCCCCCCCCc--------------------------------cccC--CCCCCEEecCCCcCcccCCcCccccCCCCeEe
Q 043388 139 GMGTASSIPD--------------------------------SLSN--ASNLERLDLSGNQFKGKVSIDFSSLKNLWWLN 184 (854)
Q Consensus 139 ~~~~~~~~p~--------------------------------~~~~--l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~ 184 (854)
.......+.. .|.+ .++|++|+|++|.+.++.+..|..+++|++|+
T Consensus 217 ~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 296 (844)
T 3j0a_A 217 TVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLN 296 (844)
T ss_dssp STTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEE
T ss_pred chhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEE
Confidence 5332222211 1222 27899999999999999999999999999999
Q ss_pred cccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeec
Q 043388 185 LEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTI 264 (854)
Q Consensus 185 L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 264 (854)
|++|+++.+... .|.++++|++|+|++|.+++..|..+..++ .|+.|++++|.+++..+..|.++++|+.|+|
T Consensus 297 L~~n~i~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 369 (844)
T 3j0a_A 297 LAYNKINKIADE------AFYGLDNLQVLNLSYNLLGELYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDL 369 (844)
T ss_dssp EESCCCCEECTT------TTTTCSSCCEEEEESCCCSCCCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEE
T ss_pred CCCCcCCCCChH------HhcCCCCCCEEECCCCCCCccCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEEC
Confidence 999999876544 578899999999999999977788888886 7999999999999888889999999999999
Q ss_pred cccccccCCCCCccCcccCceeeCccccccccCCc----------------------cccCccccchhccccceecccCC
Q 043388 265 EVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPP----------------------SLGNLTKLADLALSFNNLQGNIP 322 (854)
Q Consensus 265 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----------------------~~~~l~~L~~L~L~~N~l~~~~~ 322 (854)
++|.++++. .+++|+.|++++|+++ .+|. .+.++++|+.|+|++|++++..+
T Consensus 370 s~N~l~~i~-----~~~~L~~L~l~~N~l~-~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 443 (844)
T 3j0a_A 370 RDNALTTIH-----FIPSIPDIFLSGNKLV-TLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSG 443 (844)
T ss_dssp ETCCSCCCS-----SCCSCSEEEEESCCCC-CCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCS
T ss_pred CCCCCCccc-----CCCCcchhccCCCCcc-cccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccc
Confidence 999998542 2566666666666665 2222 24578999999999999996544
Q ss_pred C-CCcCCCCCcccccCCCcccC-----ccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcc
Q 043388 323 S-SLGNCQNLKGFDASHNKLTG-----AIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNS 396 (854)
Q Consensus 323 ~-~~~~l~~L~~L~ls~N~l~~-----~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~ 396 (854)
. .+..+++|+.|++++|.+++ ..|..+..+..+.. |++++|.+++..|..+.. +.+|+.|+|++|+
T Consensus 444 ~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~-L~Ls~N~l~~~~~~~~~~-------l~~L~~L~Ls~N~ 515 (844)
T 3j0a_A 444 DQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQV-LYLNHNYLNSLPPGVFSH-------LTALRGLSLNSNR 515 (844)
T ss_dssp SSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEEC-CCCCHHHHTTCCTTSSSS-------CCSCSEEEEESCC
T ss_pred ccccccCCccccccCCCCccccccccccchhhhcCcccccE-EECCCCcccccChhHccc-------hhhhheeECCCCC
Confidence 3 46678999999999999973 33444556666665 999999999988888887 5579999999999
Q ss_pred cccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCCc
Q 043388 397 FHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKG 453 (854)
Q Consensus 397 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 453 (854)
|++.+|..+. ++|+.|+|++|+|++.+|..| .+|+.|++++|++.|.++..+
T Consensus 516 l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~~ 567 (844)
T 3j0a_A 516 LTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELST 567 (844)
T ss_dssp CSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCCS
T ss_pred CCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccHH
Confidence 9988777776 899999999999999999876 478999999999999887643
No 26
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=447.83 Aligned_cols=419 Identities=21% Similarity=0.174 Sum_probs=247.9
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
++++|+|++|.+++..+.+|..+++|++|+|++|++++..|..|+.+++|++|+|++|+++++.|++|.++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 55556666666555555555555666666666665555555555555666666666666555555555556666666666
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCC------------CCCceeeccCccCCCCCCCCCCccccCCCCC----CEEe
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSL------------KNLWWLNLEQNNLGMGTASSIPDSLSNASNL----ERLD 160 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l------------~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L----~~L~ 160 (854)
+|+++ .+|...|.++++|++|++++|.+ ++|+.|++++|.+. ...|..|+.+++| +.|+
T Consensus 109 ~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~~~~~L~ 183 (570)
T 2z63_A 109 ETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ----SIYCTDLRVLHQMPLLNLSLD 183 (570)
T ss_dssp TSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC----EECGGGGHHHHTCTTCCCEEE
T ss_pred ccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc----eecHHHccchhccchhhhhcc
Confidence 66555 45544455555666665555432 34555555555552 1123344555555 5555
Q ss_pred cCCCcCcccCCcCccccCCCCeEecccccccC-------------------------------CCCCC------------
Q 043388 161 LSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGM-------------------------------GTAND------------ 197 (854)
Q Consensus 161 Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~-------------------------------~~~~~------------ 197 (854)
+++|.++++.+..|... +|++|++++|.... +....
T Consensus 184 l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l 262 (570)
T 2z63_A 184 LSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEF 262 (570)
T ss_dssp CTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEE
T ss_pred cCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhh
Confidence 55555555555544443 44444444441100 00000
Q ss_pred ---------hhhhhhccCCCCCcEEEcccCcCcccCChhhhhh-------------------cccccEEEccCCcccccC
Q 043388 198 ---------LDFVTLLTNCSSLKALSLCDNQFGGELPHSIANL-------------------SSTMIQFRIGGNQISGTI 249 (854)
Q Consensus 198 ---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-------------------~~~L~~L~l~~N~l~~~~ 249 (854)
...+..+..+++|++|++++|.++ .+|..+..+ .+.|+.|++++|.+.+..
T Consensus 263 ~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 263 RLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp EEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBC
T ss_pred hhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccc
Confidence 001122333444444444444444 344433333 124555555555554433
Q ss_pred CccccccccCCeeeccccccccCC--CCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCC-CCCc
Q 043388 250 PSGIRNLVNLIALTIEVNQLHGII--PDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIP-SSLG 326 (854)
Q Consensus 250 ~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~ 326 (854)
+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.+.+..| ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 33 55667777777777776543 55666777777777777777754443 7777777777777777776554 4567
Q ss_pred CCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCC-CCcCccccccccccccccccceeeccCcccccCCCccc
Q 043388 327 NCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLN-DSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSL 405 (854)
Q Consensus 327 ~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~-~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~ 405 (854)
.+++|+.|++++|.+++..|..+..+..+.. +++++|.+. +.+|..++. +++|++|+|++|++++..|..|
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~p~~~~~-------l~~L~~L~l~~n~l~~~~~~~~ 490 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEV-LKMAGNSFQENFLPDIFTE-------LRNLTFLDLSQCQLEQLSPTAF 490 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCE-EECTTCEEGGGEECSCCTT-------CTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcE-EECcCCcCccccchhhhhc-------ccCCCEEECCCCccccCChhhh
Confidence 7777777777777777666666666666654 777777776 456666655 4567777777777777777777
Q ss_pred ccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCCc
Q 043388 406 GFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKG 453 (854)
Q Consensus 406 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 453 (854)
..+++|++|+|++|++++.+|..|.++++|+.|++++|+++|.+|..+
T Consensus 491 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 491 NSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred hcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 777777788887777777777777777777777888887777777643
No 27
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-47 Score=447.63 Aligned_cols=347 Identities=21% Similarity=0.258 Sum_probs=244.9
Q ss_pred cccccccCCcCccCCCCCcEEecccccCccc-----------------Chhhhc--CCCCCceeeecccccccccCcccc
Q 043388 49 WNSLGGQIPTTLGLLRNLVYLNVAENQFSGM-----------------FPRWIC--NISSLEFIYLTVNRFSGSLPFDIL 109 (854)
Q Consensus 49 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~ 109 (854)
+|++++ +|..|+.+++|++|+|++|+|++. +|+.++ ++++|++|+|++|++.+.+| ..|
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p-~~l 269 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP-TFL 269 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC-TTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh-HHH
Confidence 345555 566666666666666666666654 666666 66666666666666665555 335
Q ss_pred cCCCCCcEEEcccCC-C------------------CCCceeeccCccCCCCCCCCCCc--cccCCCCCCEEecCCCcCcc
Q 043388 110 VNLPNLKELYLTFCS-L------------------KNLWWLNLEQNNLGMGTASSIPD--SLSNASNLERLDLSGNQFKG 168 (854)
Q Consensus 110 ~~l~~L~~L~l~~n~-l------------------~~L~~L~L~~N~l~~~~~~~~p~--~~~~l~~L~~L~Ls~N~i~~ 168 (854)
.++++|++|++++|+ + ++|+.|+|++|++ +.+|. .|+++++|++|+|++|++++
T Consensus 270 ~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l-----~~ip~~~~l~~l~~L~~L~L~~N~l~g 344 (636)
T 4eco_A 270 KALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNL-----KTFPVETSLQKMKKLGMLECLYNQLEG 344 (636)
T ss_dssp TTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCC-----SSCCCHHHHTTCTTCCEEECCSCCCEE
T ss_pred hcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcC-----CccCchhhhccCCCCCEEeCcCCcCcc
Confidence 566666666666665 3 4555566666655 35677 77778888888888888876
Q ss_pred cCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCC-CcEEEcccCcCcccCChhhhhhc-ccccEEEccCCccc
Q 043388 169 KVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSS-LKALSLCDNQFGGELPHSIANLS-STMIQFRIGGNQIS 246 (854)
Q Consensus 169 ~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~-~~L~~L~l~~N~l~ 246 (854)
..| .|..+++|++|+|++|+++.++. .+..+++ |++|++++|.++ .+|..+.... +.|+.|++++|.++
T Consensus 345 ~ip-~~~~l~~L~~L~L~~N~l~~lp~-------~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~ 415 (636)
T 4eco_A 345 KLP-AFGSEIKLASLNLAYNQITEIPA-------NFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIG 415 (636)
T ss_dssp ECC-CCEEEEEESEEECCSSEEEECCT-------TSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTT
T ss_pred chh-hhCCCCCCCEEECCCCccccccH-------hhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCC
Confidence 666 77777888888888887764433 3666777 888888888877 6776665542 25777788888887
Q ss_pred ccCCcccc-------ccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCcc-ccCc-------cccchhc
Q 043388 247 GTIPSGIR-------NLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPS-LGNL-------TKLADLA 311 (854)
Q Consensus 247 ~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l-------~~L~~L~ 311 (854)
+..|..|. .+++|++|+|++|+++++.+..|..+++|++|+|++|+++ .+|.. +..+ ++|+.|+
T Consensus 416 ~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSID 494 (636)
T ss_dssp TTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEE
T ss_pred CcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEE
Confidence 77777777 6777778888888777655555666777888888888777 44433 3322 2777777
Q ss_pred cccceecccCCCCCc--CCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccce
Q 043388 312 LSFNNLQGNIPSSLG--NCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEY 389 (854)
Q Consensus 312 L~~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~ 389 (854)
|++|+++ .+|..+. .+++|+.|++++|++++ +|.. +++ +.+|++
T Consensus 495 Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~-------------------------~~~-------l~~L~~ 540 (636)
T 4eco_A 495 LRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQ-------------------------PLN-------SSTLKG 540 (636)
T ss_dssp CCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCG-------------------------GGG-------CSSCCE
T ss_pred CcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChh-------------------------hhc-------CCCCCE
Confidence 7777777 5666665 77777777777777764 4443 333 456889
Q ss_pred eec------cCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccC
Q 043388 390 LDI------SSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEV 449 (854)
Q Consensus 390 L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 449 (854)
|+| ++|++.+.+|..++.+++|++|+|++|+| +.+|..+. ++|+.|||++|++...-
T Consensus 541 L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 541 FGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISID 603 (636)
T ss_dssp EECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEE
T ss_pred EECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcccc
Confidence 998 56888899999999999999999999999 47888766 79999999999987643
No 28
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-46 Score=438.93 Aligned_cols=431 Identities=22% Similarity=0.215 Sum_probs=360.1
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
...+++.++.+++ .+|..+. +++++|+|++|++++..+..|..+++|++|+|++|+++++.|++|+++++|++|+|+
T Consensus 8 ~~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 8 PNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TTTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCc
Confidence 4567899999998 7887665 589999999999998889999999999999999999999999999999999999999
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCC-----------CCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSL-----------KNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQ 165 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l-----------~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~ 165 (854)
+|+++ .+|...|.++++|++|++++|++ ++|++|+|++|.+.. ..+|..|.++++|++|++++|+
T Consensus 85 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~---~~lp~~~~~l~~L~~L~l~~n~ 160 (570)
T 2z63_A 85 GNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS---FKLPEYFSNLTNLEHLDLSSNK 160 (570)
T ss_dssp TCCCC-EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCC---CCCCGGGGGCTTCCEEECTTSC
T ss_pred CCcCC-ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccce---ecChhhhcccCCCCEEeCcCCc
Confidence 99998 78888999999999999997754 578999999999842 1468999999999999999999
Q ss_pred CcccCCcCccccCCC----CeEecccccccCCCCCChhhhhhccCCCCCcEEEcccC-----------------------
Q 043388 166 FKGKVSIDFSSLKNL----WWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDN----------------------- 218 (854)
Q Consensus 166 i~~~~~~~f~~l~~L----~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N----------------------- 218 (854)
++++.+..|..+++| +.|++++|.++.+... .|..+ +|+.|++++|
T Consensus 161 l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~------~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~ 233 (570)
T 2z63_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG------AFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLV 233 (570)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT------TTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEE
T ss_pred cceecHHHccchhccchhhhhcccCCCCceecCHH------HhccC-cceeEecccccccccchhhhhcCccccceeeec
Confidence 999999999999999 8999999999877654 23333 6777777666
Q ss_pred -----------------------------------cCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeee
Q 043388 219 -----------------------------------QFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALT 263 (854)
Q Consensus 219 -----------------------------------~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 263 (854)
.+.+..|..+..+. .|+.|++++|.++ .+|..+..+ +|++|+
T Consensus 234 ~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~ 310 (570)
T 2z63_A 234 LGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLVSVTIE-RVKDFSYNF-GWQHLE 310 (570)
T ss_dssp EEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEESCEEC-SCCBCCSCC-CCSEEE
T ss_pred cccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcC-cccEEEecCccch-hhhhhhccC-CccEEe
Confidence 34445566677665 7999999999998 578888777 888888
Q ss_pred ccccccccCCCCCc-------------------cCcccCceeeCccccccccC--CccccCccccchhccccceecccCC
Q 043388 264 IEVNQLHGIIPDGV-------------------GELQHLQQLYMFRNFLQGSI--PPSLGNLTKLADLALSFNNLQGNIP 322 (854)
Q Consensus 264 L~~N~l~~~~~~~~-------------------~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~ 322 (854)
+++|.+..+....+ ..+++|++|++++|++++.. |..+..+++|+.|++++|.+.+..+
T Consensus 311 l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 390 (570)
T 2z63_A 311 LVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS 390 (570)
T ss_dssp EESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE
T ss_pred eccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc
Confidence 88887774332221 46778888888888887554 6778888899999999999886544
Q ss_pred CCCcCCCCCcccccCCCcccCccch-hhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccc-cC
Q 043388 323 SSLGNCQNLKGFDASHNKLTGAIPQ-QVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFH-GV 400 (854)
Q Consensus 323 ~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~-~~ 400 (854)
. +..+++|+.|++++|.+++..|. .+..+..+.. +++++|.+.+..|..+.. +++|++|+|++|.++ +.
T Consensus 391 ~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~-------l~~L~~L~l~~n~l~~~~ 461 (570)
T 2z63_A 391 N-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY-LDISHTHTRVAFNGIFNG-------LSSLEVLKMAGNSFQENF 461 (570)
T ss_dssp E-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE-EECTTSCCEECCTTTTTT-------CTTCCEEECTTCEEGGGE
T ss_pred c-ccccCCCCEEEccCCccccccchhhhhcCCCCCE-EeCcCCcccccchhhhhc-------CCcCcEEECcCCcCcccc
Confidence 4 88899999999999999876663 4556666654 899999998888877777 567999999999998 57
Q ss_pred CCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCC-ccccCcccccccccccccCCc
Q 043388 401 IPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTK-GVFSNKTKISLQVNVKLCGGI 473 (854)
Q Consensus 401 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 473 (854)
+|..+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..|.. ..+.+...+.+.+|+..|.++
T Consensus 462 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred chhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 8999999999999999999999988999999999999999999999887753 456777888999999888754
No 29
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.3e-47 Score=411.97 Aligned_cols=282 Identities=20% Similarity=0.211 Sum_probs=204.5
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 624 (854)
++|++.+.||+|+||+||+|++..+|+.||||+++.... ...+.+.+|+++|++++|||||++++++..... .....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 479999999999999999999999999999999964432 234678899999999999999999999865432 12346
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.|||||||+ |+|.+++...+ .+++.++..|+.||+.||+|||++ +||||||||+|||++.++..++ |||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 899999996 58999998754 789999999999999999999999 9999999999999999887776 999
Q ss_pred cccccccCCC-CCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc--C
Q 043388 704 LSHQLDSASK-TPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT--L 779 (854)
Q Consensus 704 ~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~ 779 (854)
+|+.+..... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+.... ..+..+.... .
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p 282 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTP 282 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCC
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCC
Confidence 9987754322 22233456899999999998875 4699999999999999999999999864321 1122222211 1
Q ss_pred CcccccccCchhhHHHhhcc-chhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANN-SMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+................... ...+.........+..++.+++.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 11111111111111110000 00000000011122456789999999999999999999876
No 30
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-46 Score=437.35 Aligned_cols=420 Identities=20% Similarity=0.245 Sum_probs=297.1
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccCh
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFP 81 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 81 (854)
|.++ .+|..+. ++|++|+|++|++++..|.+|+.+++|++|+|++|++++..|+.|+.+++|++|+|++|++++..|
T Consensus 15 ~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 15 RSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred Cccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 4555 6777665 689999999999998888889999999999999999998888899999999999999999998888
Q ss_pred hhhcCCCCCceeeecccccccccC-cccccCCCCCcEEEcccCC------------CCCCceeeccCccCCCCCCCCCCc
Q 043388 82 RWICNISSLEFIYLTVNRFSGSLP-FDILVNLPNLKELYLTFCS------------LKNLWWLNLEQNNLGMGTASSIPD 148 (854)
Q Consensus 82 ~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~l~~n~------------l~~L~~L~L~~N~l~~~~~~~~p~ 148 (854)
.+|+++++|++|+|++|+++ .++ ...|.++++|++|++++|. +++|++|++++|.+. +.+|.
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~----~~~~~ 166 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR----NYQSQ 166 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC----EECTT
T ss_pred HHhccCCCCcEEECCCCccc-ccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc----ccChh
Confidence 88999999999999999987 432 3568889999999998775 356788888888884 34677
Q ss_pred cccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhh
Q 043388 149 SLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSI 228 (854)
Q Consensus 149 ~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 228 (854)
.+.++++|++|++++|.+..++...+..+++|++|++++|+++....... .....+++|+.|++++|.+++..+..+
T Consensus 167 ~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPL---PVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp TTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCC---SSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred hhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccccccc---chhhhhhcccceeccccccchhHHHHH
Confidence 78888888888888888775555445667888888888888765432110 011223344444444443332211111
Q ss_pred --------------------------------------------------------------hhhcccccEEEccCCccc
Q 043388 229 --------------------------------------------------------------ANLSSTMIQFRIGGNQIS 246 (854)
Q Consensus 229 --------------------------------------------------------------~~l~~~L~~L~l~~N~l~ 246 (854)
......++.|++++|.++
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~ 323 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF 323 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC
T ss_pred HHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc
Confidence 112235677777777776
Q ss_pred ccCCccc-cccccCCeeeccccccccCCC---CCccCcccCceeeCccccccccCC--ccccCccccchhccccceeccc
Q 043388 247 GTIPSGI-RNLVNLIALTIEVNQLHGIIP---DGVGELQHLQQLYMFRNFLQGSIP--PSLGNLTKLADLALSFNNLQGN 320 (854)
Q Consensus 247 ~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~ 320 (854)
.+|..+ .++++|++|+|++|++++..| ..++.+++|++|++++|++++..+ ..+..+++|+.|++++|+++ .
T Consensus 324 -~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 324 -LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp -CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred -cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 455554 467778888888887776543 346677778888888887775432 45777777888888888777 5
Q ss_pred CCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccC
Q 043388 321 IPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGV 400 (854)
Q Consensus 321 ~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~ 400 (854)
+|..+..+++|+.|++++|+++ .+|..+. ..+. .+++++|.+++.+ +. +++|++|+|++|+|+ .
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~-~L~Ls~N~l~~~~----~~-------l~~L~~L~Ls~N~l~-~ 465 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLE-VLDVSNNNLDSFS----LF-------LPRLQELYISRNKLK-T 465 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCS-EEECCSSCCSCCC----CC-------CTTCCEEECCSSCCS-S
T ss_pred CChhhcccccccEEECCCCCcc-cccchhc--CCce-EEECCCCChhhhc----cc-------CChhcEEECCCCccC-c
Confidence 6777777777888888888776 3444332 1222 3777777776542 12 456778888888887 4
Q ss_pred CCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCC
Q 043388 401 IPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPT 451 (854)
Q Consensus 401 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 451 (854)
+|. ...+++|++|+|++|++++.+|..|..+++|+.|++++|++.|.+|.
T Consensus 466 ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 466 LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 554 45677788888888888877777777788888888888888777764
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.9e-47 Score=442.45 Aligned_cols=417 Identities=19% Similarity=0.240 Sum_probs=345.9
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeeccccccc---------------------------------ccCCcCcc-
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLG---------------------------------GQIPTTLG- 61 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------------------------~~~~~~~~- 61 (854)
..++.|+|++|.++|.+|.+++.+++|++|+|++|.+. +.+|..+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 46778888888888888888888888888888888662 12222221
Q ss_pred ------------------CCCCCcEEecc--cccCcccChhhhcCCCCCceeeecccccccc-----------------c
Q 043388 62 ------------------LLRNLVYLNVA--ENQFSGMFPRWICNISSLEFIYLTVNRFSGS-----------------L 104 (854)
Q Consensus 62 ------------------~l~~L~~L~Ls--~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~ 104 (854)
....++.+++. .|++++ +|.+|+++++|++|+|++|+|++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 11122223332 689998 899999999999999999999964 7
Q ss_pred Ccccc-cCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCc-Ccc-cCCcCcccc----
Q 043388 105 PFDIL-VNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQ-FKG-KVSIDFSSL---- 177 (854)
Q Consensus 105 ~~~~~-~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-i~~-~~~~~f~~l---- 177 (854)
|..+. .++++|++|++++|++. +.+|..|+++++|++|+|++|+ +++ ..|..+..+
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~l~-----------------~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~ 302 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCPNL-----------------TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAP 302 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCTTC-----------------SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSG
T ss_pred chhhhhcccCCCCEEEecCCcCC-----------------ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccc
Confidence 76531 27777777777777654 5689999999999999999999 998 778888776
Q ss_pred --CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccc
Q 043388 178 --KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRN 255 (854)
Q Consensus 178 --~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~ 255 (854)
++|++|+|++|+++.++. ...+.++++|++|++++|+++|.+| .+..+. .|+.|++++|+++ .+|..|.+
T Consensus 303 ~l~~L~~L~L~~n~l~~ip~-----~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~ 374 (636)
T 4eco_A 303 VGEKIQIIYIGYNNLKTFPV-----ETSLQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFCG 374 (636)
T ss_dssp GGGTCCEEECCSSCCSSCCC-----HHHHTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSEE
T ss_pred cCCCCCEEECCCCcCCccCc-----hhhhccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCCCccc-cccHhhhh
Confidence 999999999999985443 0158899999999999999999999 888886 8999999999999 88999999
Q ss_pred ccc-CCeeeccccccccCCCCCccCcc--cCceeeCccccccccCCcccc-------CccccchhccccceecccCCCCC
Q 043388 256 LVN-LIALTIEVNQLHGIIPDGVGELQ--HLQQLYMFRNFLQGSIPPSLG-------NLTKLADLALSFNNLQGNIPSSL 325 (854)
Q Consensus 256 l~~-L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~ 325 (854)
+++ |++|++++|+++ .+|..+..++ +|++|++++|.+++.+|..|. .+++|+.|+|++|+++...+..+
T Consensus 375 l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~ 453 (636)
T 4eco_A 375 FTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELF 453 (636)
T ss_dssp ECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHH
T ss_pred hcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHH
Confidence 999 999999999999 6788887765 999999999999999999998 88899999999999995444456
Q ss_pred cCCCCCcccccCCCcccCccchhhcchh--------hhHHHHHhhcCCCCCCcCcccc--ccccccccccccceeeccCc
Q 043388 326 GNCQNLKGFDASHNKLTGAIPQQVLSIT--------TLSVYLALAHNLLNDSLPLQVG--NLKNLVITCVSLEYLDISSN 395 (854)
Q Consensus 326 ~~l~~L~~L~ls~N~l~~~~p~~~~~~~--------~l~~~l~l~~n~l~~~~p~~~~--~l~~l~~~~~~L~~L~Ls~N 395 (854)
..+++|+.|++++|+++ .+|...+... .+.. +++++|.++ .+|..+. . +++|++|+|++|
T Consensus 454 ~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~-L~Ls~N~l~-~lp~~~~~~~-------l~~L~~L~Ls~N 523 (636)
T 4eco_A 454 STGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTS-IDLRFNKLT-KLSDDFRATT-------LPYLVGIDLSYN 523 (636)
T ss_dssp HTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCE-EECCSSCCC-BCCGGGSTTT-------CTTCCEEECCSS
T ss_pred ccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccE-EECcCCcCC-ccChhhhhcc-------CCCcCEEECCCC
Confidence 67999999999999999 7887766543 4444 999999998 6777665 5 567999999999
Q ss_pred ccccCCCcccccCCCCCEEEc------cCcccccccchhhcCccCCCeeecccccCcccCCCCccccCcccccccccccc
Q 043388 396 SFHGVIPFSLGFMKSIKELNV------SSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFSNKTKISLQVNVKL 469 (854)
Q Consensus 396 ~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 469 (854)
++++ +|..+..+++|+.|+| ++|++.+.+|..+.++++|+.|+|++|++ +.+|.. .+.....+.+.+|+..
T Consensus 524 ~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 524 SFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNI 600 (636)
T ss_dssp CCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTC
T ss_pred CCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCc
Confidence 9997 8999999999999999 56889999999999999999999999999 778865 4478888889999877
Q ss_pred cCC
Q 043388 470 CGG 472 (854)
Q Consensus 470 c~~ 472 (854)
|-.
T Consensus 601 ~~~ 603 (636)
T 4eco_A 601 SID 603 (636)
T ss_dssp EEE
T ss_pred ccc
Confidence 644
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.9e-46 Score=443.48 Aligned_cols=395 Identities=20% Similarity=0.224 Sum_probs=233.8
Q ss_pred CCcccccCchhhhcCCCCCEEec-ccccccccCCccc-------------------------------------------
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAI-DFNYLTGQLPDFV------------------------------------------- 36 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L-~~n~l~~~~~~~~------------------------------------------- 36 (854)
.|+++|.+|+.|++|++|++|+| ++|.+.|..|-..
T Consensus 332 ~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~ 411 (876)
T 4ecn_A 332 GFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRN 411 (876)
T ss_dssp TTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTC
T ss_pred cCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhC
Confidence 36788888888888888888888 8887766532110
Q ss_pred --------cCcCCCCeeeccc--ccccccCCcCccCCCCCcEEecccccCcc-----------------cChhhhc--CC
Q 043388 37 --------GNLSALGMLLIRW--NSLGGQIPTTLGLLRNLVYLNVAENQFSG-----------------MFPRWIC--NI 87 (854)
Q Consensus 37 --------~~l~~L~~L~l~~--n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l 87 (854)
.....++.+.+.. |++++ +|..|+.+++|++|+|++|+|++ .+|+.++ ++
T Consensus 412 ~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L 490 (876)
T 4ecn_A 412 PEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNL 490 (876)
T ss_dssp TTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred ccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccC
Confidence 1112233333333 67775 78888888888888888888887 2777766 88
Q ss_pred CCCceeeecccccccccCcccccCCCCCcEEEcccCC-CC-------------------CCceeeccCccCCCCCCCCCC
Q 043388 88 SSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCS-LK-------------------NLWWLNLEQNNLGMGTASSIP 147 (854)
Q Consensus 88 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~-l~-------------------~L~~L~L~~N~l~~~~~~~~p 147 (854)
++|++|+|++|++.+.+| ..|.++++|++|++++|+ ++ +|+.|+|++|++ ..+|
T Consensus 491 ~~L~~L~Ls~N~l~~~iP-~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L-----~~ip 564 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLP-DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL-----EEFP 564 (876)
T ss_dssp TTCCEEEEESCTTCCSCC-GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC-----CBCC
T ss_pred CCCCEEECcCCCCCccCh-HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC-----CccC
Confidence 888888888888877777 456778888888877776 43 344444444444 2344
Q ss_pred c--cccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCC-CcEEEcccCcCcccC
Q 043388 148 D--SLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSS-LKALSLCDNQFGGEL 224 (854)
Q Consensus 148 ~--~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~-L~~L~L~~N~l~~~~ 224 (854)
. .|.++++|++|+|++|+|+ .+| .|..+++|++|+|++|+++.++. .+..+++ |+.|+|++|.++ .+
T Consensus 565 ~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~-------~l~~l~~~L~~L~Ls~N~L~-~l 634 (876)
T 4ecn_A 565 ASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPE-------DFCAFTDQVEGLGFSHNKLK-YI 634 (876)
T ss_dssp CHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCT-------TSCEECTTCCEEECCSSCCC-SC
T ss_pred ChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchH-------HHhhccccCCEEECcCCCCC-cC
Confidence 4 4555555555555555554 222 44555555555555555442221 2344444 555555555554 44
Q ss_pred Chhhhhhc-ccccEEEccCCcccccCCccc---c--ccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCC
Q 043388 225 PHSIANLS-STMIQFRIGGNQISGTIPSGI---R--NLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIP 298 (854)
Q Consensus 225 p~~~~~l~-~~L~~L~l~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 298 (854)
|..+..+. ..|+.|++++|++++.+|... . .+++|+.|+|++|+++.+.+..+..+++|+.|+|++|+|+ .+|
T Consensus 635 p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip 713 (876)
T 4ecn_A 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIP 713 (876)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCC
T ss_pred chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccC
Confidence 44443332 124455555555544333211 1 2224455555555554332222334445555555555554 233
Q ss_pred ccccC--------ccccchhccccceecccCCCCCc--CCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCC
Q 043388 299 PSLGN--------LTKLADLALSFNNLQGNIPSSLG--NCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLND 368 (854)
Q Consensus 299 ~~~~~--------l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~ 368 (854)
..+.. +++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++ .+
T Consensus 714 ~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L-------------------------~~ 767 (876)
T 4ecn_A 714 ENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF-------------------------SS 767 (876)
T ss_dssp TTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCC-------------------------SS
T ss_pred hHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCC-------------------------Cc
Confidence 22211 124555555555554 3444443 445555555555544 44
Q ss_pred CcCccccccccccccccccceeeccC------cccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeeccc
Q 043388 369 SLPLQVGNLKNLVITCVSLEYLDISS------NSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSY 442 (854)
Q Consensus 369 ~~p~~~~~l~~l~~~~~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 442 (854)
+|..+++ +++|+.|+|++ |++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++
T Consensus 768 -lp~~l~~-------L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~ 836 (876)
T 4ecn_A 768 -FPTQPLN-------SSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIAD 836 (876)
T ss_dssp -CCCGGGG-------CTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCS
T ss_pred -cchhhhc-------CCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCC
Confidence 4444444 45688888866 888889999999999999999999999 58888765 6999999999
Q ss_pred ccCcccCC
Q 043388 443 NHLEGEVP 450 (854)
Q Consensus 443 N~l~~~~p 450 (854)
|++....+
T Consensus 837 N~l~~i~~ 844 (876)
T 4ecn_A 837 NPNISIDV 844 (876)
T ss_dssp CTTCEEEC
T ss_pred CCCCccCh
Confidence 99876543
No 33
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-45 Score=439.29 Aligned_cols=412 Identities=20% Similarity=0.249 Sum_probs=344.3
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeec-ccccccccCCcCc----------------------------------
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLI-RWNSLGGQIPTTL---------------------------------- 60 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l-~~n~l~~~~~~~~---------------------------------- 60 (854)
..++.|+|++|.+.|.+|.+|++|++|++|+| ++|.+++..|-.-
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9998876633221
Q ss_pred -----------------cCCCCCcEEeccc--ccCcccChhhhcCCCCCceeeeccccccc-----------------cc
Q 043388 61 -----------------GLLRNLVYLNVAE--NQFSGMFPRWICNISSLEFIYLTVNRFSG-----------------SL 104 (854)
Q Consensus 61 -----------------~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 104 (854)
.....++.+++.. |++++ +|..|+++++|++|+|++|+|++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1122344455544 89998 89999999999999999999996 38
Q ss_pred Cccc-ccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCc-Ccc-cCCcCccccC---
Q 043388 105 PFDI-LVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQ-FKG-KVSIDFSSLK--- 178 (854)
Q Consensus 105 ~~~~-~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-i~~-~~~~~f~~l~--- 178 (854)
|..+ |.++++|++|+|++|++. +.+|..|.++++|++|+|++|+ +++ ..|..|..++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~-----------------~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~ 544 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNM-----------------TQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDE 544 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTC-----------------CSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCT
T ss_pred ChhhhhccCCCCCEEECcCCCCC-----------------ccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcc
Confidence 8765 558888888888777653 5679999999999999999998 887 6676666555
Q ss_pred ----CCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccc
Q 043388 179 ----NLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIR 254 (854)
Q Consensus 179 ----~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~ 254 (854)
+|++|+|++|+++.++. ...+.++++|+.|+|++|+++ .+| .+..++ .|+.|+|++|+++ .+|..+.
T Consensus 545 ~~l~~L~~L~Ls~N~L~~ip~-----~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l~ 615 (876)
T 4ecn_A 545 DTGPKIQIFYMGYNNLEEFPA-----SASLQKMVKLGLLDCVHNKVR-HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDFC 615 (876)
T ss_dssp TTTTTCCEEECCSSCCCBCCC-----HHHHTTCTTCCEEECTTSCCC-BCC-CCCTTS-EESEEECCSSCCS-CCCTTSC
T ss_pred cccCCccEEEeeCCcCCccCC-----hhhhhcCCCCCEEECCCCCcc-cch-hhcCCC-cceEEECcCCccc-cchHHHh
Confidence 99999999999985443 015889999999999999999 888 788876 7999999999999 8898999
Q ss_pred cccc-CCeeeccccccccCCCCCccCccc--CceeeCccccccccCCccc---c--CccccchhccccceecccCCCC-C
Q 043388 255 NLVN-LIALTIEVNQLHGIIPDGVGELQH--LQQLYMFRNFLQGSIPPSL---G--NLTKLADLALSFNNLQGNIPSS-L 325 (854)
Q Consensus 255 ~l~~-L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~~~~~~~-~ 325 (854)
++++ |+.|+|++|+++ .+|..+..++. |+.|+|++|++.+.+|... . .+++|+.|+|++|.++ .+|.. +
T Consensus 616 ~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~ 693 (876)
T 4ecn_A 616 AFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELF 693 (876)
T ss_dssp EECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHH
T ss_pred hccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHH
Confidence 9999 999999999999 67788877754 9999999999998766432 2 3458999999999999 45554 4
Q ss_pred cCCCCCcccccCCCcccCccchhhcchh--------hhHHHHHhhcCCCCCCcCcccc--ccccccccccccceeeccCc
Q 043388 326 GNCQNLKGFDASHNKLTGAIPQQVLSIT--------TLSVYLALAHNLLNDSLPLQVG--NLKNLVITCVSLEYLDISSN 395 (854)
Q Consensus 326 ~~l~~L~~L~ls~N~l~~~~p~~~~~~~--------~l~~~l~l~~n~l~~~~p~~~~--~l~~l~~~~~~L~~L~Ls~N 395 (854)
..+++|+.|+|++|+++ .+|..++... .+.. |++++|.+. .+|..+. . +++|+.|+|++|
T Consensus 694 ~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~-L~Ls~N~L~-~lp~~l~~~~-------l~~L~~L~Ls~N 763 (876)
T 4ecn_A 694 ATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTT-IDLRFNKLT-SLSDDFRATT-------LPYLSNMDVSYN 763 (876)
T ss_dssp HTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCE-EECCSSCCC-CCCGGGSTTT-------CTTCCEEECCSS
T ss_pred ccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccE-EECCCCCCc-cchHHhhhcc-------CCCcCEEEeCCC
Confidence 58999999999999998 7888776543 4444 999999998 6777765 5 567999999999
Q ss_pred ccccCCCcccccCCCCCEEEccC------cccccccchhhcCccCCCeeecccccCcccCCCCccccCcccccccccccc
Q 043388 396 SFHGVIPFSLGFMKSIKELNVSS------NNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFSNKTKISLQVNVKL 469 (854)
Q Consensus 396 ~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~ 469 (854)
+|++ +|..+..+++|+.|+|++ |++.+.+|..|.++++|+.|+|++|++ +.+|.. .+.+...+.+.+|+..
T Consensus 764 ~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 764 CFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNI 840 (876)
T ss_dssp CCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTC
T ss_pred CCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCC
Confidence 9997 788999999999999976 889999999999999999999999999 788875 4467788888888754
No 34
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1e-45 Score=399.23 Aligned_cols=202 Identities=25% Similarity=0.359 Sum_probs=168.5
Q ss_pred HHhhccccCccCCCcceEEEEeEEC---CCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILG---GEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 621 (854)
..+.|++.++||+|+||+||+|+++ .+++.||+|++.... ...++.+|+++++.+ +|||||++++++.+.+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~--- 93 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND--- 93 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT---
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC---
Confidence 4567999999999999999999874 467899999986543 346788999999998 6999999999998765
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC-cccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAH- 699 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~~- 699 (854)
+.|+|||||++|+|.+++. .+++.+++.++.|++.||+|||++ +|+||||||+|||++.+ +..+
T Consensus 94 --~~~lvmE~~~g~~L~~~~~---------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 94 --HVVIAMPYLEHESFLDILN---------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp --EEEEEEECCCCCCHHHHHT---------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred --EEEEEEeCCCcccHHHHHc---------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 7899999999999999984 578899999999999999999999 99999999999999876 4444
Q ss_pred cccccccccccCCCC-------------------------CCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHH
Q 043388 700 QNFSLSHQLDSASKT-------------------------PSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLE 753 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~e 753 (854)
+|||+|+........ .......+||+.|+|||++.+. .++.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 599999866443211 0112235799999999998875 48999999999999999
Q ss_pred HHhCCCCCCCccc
Q 043388 754 MFTGRRPTDAAFT 766 (854)
Q Consensus 754 lltg~~pf~~~~~ 766 (854)
|+||+.||....+
T Consensus 240 ll~G~~Pf~~~~~ 252 (361)
T 4f9c_A 240 LLSGRYPFYKASD 252 (361)
T ss_dssp HHHTCSSSSCCSS
T ss_pred HHHCCCCCCCCCC
Confidence 9999999975543
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.1e-46 Score=428.43 Aligned_cols=425 Identities=21% Similarity=0.281 Sum_probs=262.4
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
+|+|+ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+|++..|..|+.+++|++|+|++|+|++ +
T Consensus 9 ~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 84 (520)
T 2z7x_B 9 KNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-I 84 (520)
T ss_dssp TSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-E
T ss_pred CCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-c
Confidence 46777 5777666 789999999999987777788888999999999999988888888889999999999999884 5
Q ss_pred hhhhcCCCCCceeeecccccccccC-cccccCCCCCcEEEcccCCCC--------CC--ceeeccCccCCCCCCCCCCcc
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLP-FDILVNLPNLKELYLTFCSLK--------NL--WWLNLEQNNLGMGTASSIPDS 149 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~l~~n~l~--------~L--~~L~L~~N~l~~~~~~~~p~~ 149 (854)
|.. .+++|++|+|++|+|+ .++ +..|.++++|++|++++|.++ +| +.|+|++|.+.. .+..|..
T Consensus 85 p~~--~l~~L~~L~L~~N~l~-~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~--~~~~~~~ 159 (520)
T 2z7x_B 85 SCH--PTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYG--EKEDPEG 159 (520)
T ss_dssp ECC--CCCCCSEEECCSSCCS-SCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTT--SSCCTTT
T ss_pred Ccc--ccCCccEEeccCCccc-cccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccc--ccccccc
Confidence 554 7888999999999887 433 256788899999998888764 56 888888888721 1234444
Q ss_pred ccCCC-CCCEEecCCCcCcccC-CcCccccCCCCeEecccccccCCCCCChhhhhhccCCC-------------------
Q 043388 150 LSNAS-NLERLDLSGNQFKGKV-SIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCS------------------- 208 (854)
Q Consensus 150 ~~~l~-~L~~L~Ls~N~i~~~~-~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~------------------- 208 (854)
|..+. +...+++++|++.+.. +..|..+++|+.|++++|.-...-..-......+..++
T Consensus 160 l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~ 239 (520)
T 2z7x_B 160 LQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIR 239 (520)
T ss_dssp TTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHH
T ss_pred ccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHH
Confidence 44433 2224455555544322 23444555555555555530000000000111334444
Q ss_pred --------CCcEEEcccCcCcccCChhh-----hhhcccccEEEccCCcccccCC-cccccc---ccCCeeecccccccc
Q 043388 209 --------SLKALSLCDNQFGGELPHSI-----ANLSSTMIQFRIGGNQISGTIP-SGIRNL---VNLIALTIEVNQLHG 271 (854)
Q Consensus 209 --------~L~~L~L~~N~l~~~~p~~~-----~~l~~~L~~L~l~~N~l~~~~~-~~~~~l---~~L~~L~L~~N~l~~ 271 (854)
+|++|++++|++++.+|..+ ..+. .|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+..
T Consensus 240 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 240 ILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHhhhCcccEEEeecccccCccccchhhcccccCc-eeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccc
Confidence 45555555555554444444 3333 444555555554 222 333333 345555555555543
Q ss_pred CCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecc--cCCCCCcCCCCCcccccCCCcccCccchh-
Q 043388 272 IIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQG--NIPSSLGNCQNLKGFDASHNKLTGAIPQQ- 348 (854)
Q Consensus 272 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~p~~- 348 (854)
.. .+..+++|++|++++|++++.+|..++.+++|+.|++++|++++ .+|..+..+++|+.|++++|++++.+|..
T Consensus 317 ~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~ 394 (520)
T 2z7x_B 317 ML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD 394 (520)
T ss_dssp CC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCS
T ss_pred cc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccch
Confidence 21 12566667777777777766666666667777777777777664 34455666677777777777776545554
Q ss_pred hcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccch-
Q 043388 349 VLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPE- 427 (854)
Q Consensus 349 ~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~- 427 (854)
+..+..+.. +++++|.+++..|..+. .+|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|.
T Consensus 395 ~~~l~~L~~-L~Ls~N~l~~~~~~~l~---------~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~ 462 (520)
T 2z7x_B 395 CSWTKSLLS-LNMSSNILTDTIFRCLP---------PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDG 462 (520)
T ss_dssp CCCCTTCCE-EECCSSCCCGGGGGSCC---------TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTT
T ss_pred hccCccCCE-EECcCCCCCcchhhhhc---------ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHH
Confidence 333333333 66666666655554432 24667777777776 556655567777777777777773 443
Q ss_pred hhcCccCCCeeecccccCcccCCC
Q 043388 428 FLQNLSFLEFLNLSYNHLEGEVPT 451 (854)
Q Consensus 428 ~~~~l~~L~~L~ls~N~l~~~~p~ 451 (854)
.|..+++|+.|++++|+++|.++.
T Consensus 463 ~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 463 IFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HhccCCcccEEECcCCCCcccCCc
Confidence 366677777777777777766553
No 36
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.5e-44 Score=409.10 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=198.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHH---HHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVA---ECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|.+.++||+|+||.||+|+++.+|+.||||+++... ........+ ++.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 568999999999999999999999999999999996431 222233334 456667779999999999998766
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ 700 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~ 700 (854)
..|+|||||+||+|.+++...+ .+++.+++.++.||+.||+|||++ +||||||||+|||++.++..++
T Consensus 266 ---~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 266 ---KLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ---EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 7999999999999999998765 789999999999999999999999 9999999999999999988777
Q ss_pred -ccccccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 701 -NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 701 -Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
|||+|+.+..... ...+||+.|||||++.+ ..|+.++||||+||++|||++|++||........ .+.....
T Consensus 334 ~DFGlA~~~~~~~~-----~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i 406 (689)
T 3v5w_A 334 SDLGLACDFSKKKP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMT 406 (689)
T ss_dssp CCCTTCEECSSCCC-----CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHH
T ss_pred cccceeeecCCCCC-----CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhh
Confidence 9999988754332 23589999999999975 5799999999999999999999999976433221 1111111
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCC-----HHHHHH
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERME-----MRDVVA 840 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 840 (854)
..... . .+..++.++.+++.+||+.||.+|++ ++||.+
T Consensus 407 ~~~~~-~-----------------------~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 407 LTMAV-E-----------------------LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHCCC-C-----------------------CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred cCCCC-C-----------------------CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 00000 0 00112445779999999999999998 577654
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=416.13 Aligned_cols=413 Identities=19% Similarity=0.186 Sum_probs=317.4
Q ss_pred CEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeeccc
Q 043388 19 QTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVN 98 (854)
Q Consensus 19 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 98 (854)
++||+++|+|+ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|+++.|++|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 58999999999 6888776 89999999999999888889999999999999999999999999999999999999999
Q ss_pred ccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccC
Q 043388 99 RFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLK 178 (854)
Q Consensus 99 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~ 178 (854)
+|+ .+|.. .+++|++|++++|+++.+ .+|..|+++++|++|+|++|+|++ ..|..++
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~----------------~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~ 136 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDAL----------------PICKEFGNMSQLKFLGLSTTHLEK---SSVLPIA 136 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSC----------------CCCGGGGGCTTCCEEEEEESSCCG---GGGGGGT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccc----------------cchhhhccCCcceEEEecCcccch---hhccccc
Confidence 998 78865 677888888777766532 357788888888888888888875 4567777
Q ss_pred CC--CeEecccccc--cCCCCCChhh--------------------hhhccCCCCCcEEEcccCc-------CcccCChh
Q 043388 179 NL--WWLNLEQNNL--GMGTANDLDF--------------------VTLLTNCSSLKALSLCDNQ-------FGGELPHS 227 (854)
Q Consensus 179 ~L--~~L~L~~N~l--~~~~~~~~~~--------------------~~~~~~l~~L~~L~L~~N~-------l~~~~p~~ 227 (854)
+| ++|++++|.+ .......+.. ...+.++++|+.|++++|. +.+.+| .
T Consensus 137 ~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~ 215 (520)
T 2z7x_B 137 HLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-K 215 (520)
T ss_dssp TSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-G
T ss_pred cceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-h
Confidence 77 8888888887 3222221111 1134567888888888886 444333 3
Q ss_pred hhhhc--------------------------ccccEEEccCCcccccCCccc-----cccccCCeeeccccccccCCCCC
Q 043388 228 IANLS--------------------------STMIQFRIGGNQISGTIPSGI-----RNLVNLIALTIEVNQLHGIIPDG 276 (854)
Q Consensus 228 ~~~l~--------------------------~~L~~L~l~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~~~~~ 276 (854)
+..+. +.|+.|++++|++++.+|..+ .++++|+.+++++|.+ .+.+..
T Consensus 216 l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~ 294 (520)
T 2z7x_B 216 LQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSY 294 (520)
T ss_dssp GGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHH
T ss_pred hccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhh
Confidence 33333 145556666666665556555 5566666666666666 222233
Q ss_pred ccCc---ccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccC--ccchhhcc
Q 043388 277 VGEL---QHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTG--AIPQQVLS 351 (854)
Q Consensus 277 ~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~ 351 (854)
+..+ .+|+.|++++|.+.... .+..+++|++|++++|++++..|..+..+++|+.|++++|++++ .+|..+..
T Consensus 295 ~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~ 372 (520)
T 2z7x_B 295 IYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ 372 (520)
T ss_dssp HHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT
T ss_pred hhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh
Confidence 3333 45667777777665322 12688999999999999998899999999999999999999986 55667777
Q ss_pred hhhhHHHHHhhcCCCCCCcCcc-ccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhc
Q 043388 352 ITTLSVYLALAHNLLNDSLPLQ-VGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQ 430 (854)
Q Consensus 352 ~~~l~~~l~l~~n~l~~~~p~~-~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 430 (854)
+..+.. +++++|.+.+.+|.. +.. +.+|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+.
T Consensus 373 l~~L~~-L~Ls~N~l~~~l~~~~~~~-------l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 373 MKSLQQ-LDISQNSVSYDEKKGDCSW-------TKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp CTTCCE-EECCSSCCBCCGGGCSCCC-------CTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred CCCCCE-EECCCCcCCcccccchhcc-------CccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 777765 999999999866654 444 56799999999999988877665 79999999999999 7888888
Q ss_pred CccCCCeeecccccCcccCCC-CccccCcccccccccccccCC
Q 043388 431 NLSFLEFLNLSYNHLEGEVPT-KGVFSNKTKISLQVNVKLCGG 472 (854)
Q Consensus 431 ~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~~ 472 (854)
.+++|+.|+|++|+++...+. ...+.+...+.+.+|+..|.+
T Consensus 442 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 442 KLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp GCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 999999999999999954333 344667778889999988864
No 38
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.2e-45 Score=422.57 Aligned_cols=425 Identities=21% Similarity=0.229 Sum_probs=318.9
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeee
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYL 95 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 95 (854)
+..-+.|+++|.++ .+|..+. ++|++|+|++|++++..|..|+.+++|++|+|++|+|+++.|++|+++++|++|+|
T Consensus 5 ~~~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 5 DASGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp CTTSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 34455789999999 7887765 79999999999999888999999999999999999999999999999999999999
Q ss_pred cccccccccCcccccCCCCCcEEEcccCCCC------------CCceeeccCccCCCCCCCCCC-ccccCCCCCCEEecC
Q 043388 96 TVNRFSGSLPFDILVNLPNLKELYLTFCSLK------------NLWWLNLEQNNLGMGTASSIP-DSLSNASNLERLDLS 162 (854)
Q Consensus 96 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~------------~L~~L~L~~N~l~~~~~~~~p-~~~~~l~~L~~L~Ls 162 (854)
++|+++ .++...|.++++|++|++++|.++ +|+.|+|++|.+. +.+| ..|.++++|++|+|+
T Consensus 82 s~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~----~~~~~~~~~~l~~L~~L~L~ 156 (549)
T 2z81_A 82 SDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETF----SEIRRIDFAGLTSLNELEIK 156 (549)
T ss_dssp TTSCCC-SCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSC----CEECTTTTTTCCEEEEEEEE
T ss_pred CCCccC-ccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccc----cccCHhhhhcccccCeeecc
Confidence 999999 788888999999999999988653 6788899988731 3444 578889999999999
Q ss_pred CCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccC--ChhhhhhcccccEEEc
Q 043388 163 GNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGEL--PHSIANLSSTMIQFRI 240 (854)
Q Consensus 163 ~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~~L~~L~l 240 (854)
+|++++..|..|..+++|++|+++.|.+..++. ..+..+++|++|++++|++++.. |..+....+.|+.|++
T Consensus 157 ~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~------~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l 230 (549)
T 2z81_A 157 ALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLE------IFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAF 230 (549)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSBSTTHHH------HHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEE
T ss_pred CCcccccChhhhhccccCceEecccCcccccch------hhHhhcccccEEEccCCccccccccccchhhhhhcccceec
Confidence 999998888899999999999999988753321 13456889999999999998532 3333333346777777
Q ss_pred cCCcccccCCcc----cccc-----------------------------------------------------------c
Q 043388 241 GGNQISGTIPSG----IRNL-----------------------------------------------------------V 257 (854)
Q Consensus 241 ~~N~l~~~~~~~----~~~l-----------------------------------------------------------~ 257 (854)
++|.+++..+.. +..+ .
T Consensus 231 ~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~ 310 (549)
T 2z81_A 231 RGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLE 310 (549)
T ss_dssp ESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHST
T ss_pred cccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcc
Confidence 777665432211 1122 3
Q ss_pred cCCeeeccccccccCCCCCc-cCcccCceeeCccccccccCC---ccccCccccchhccccceecccCC--CCCcCCCCC
Q 043388 258 NLIALTIEVNQLHGIIPDGV-GELQHLQQLYMFRNFLQGSIP---PSLGNLTKLADLALSFNNLQGNIP--SSLGNCQNL 331 (854)
Q Consensus 258 ~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L 331 (854)
+|+.|++++|+++. +|..+ ..+++|++|++++|++++.+| ..++.+++|+.|+|++|++++..+ ..+..+++|
T Consensus 311 ~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L 389 (549)
T 2z81_A 311 KVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNL 389 (549)
T ss_dssp TCCEEEEESSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTC
T ss_pred cceEEEeccCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCC
Confidence 45556666666553 33333 467777777777777776553 236667777777777777764322 346677777
Q ss_pred cccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCC
Q 043388 332 KGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSI 411 (854)
Q Consensus 332 ~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 411 (854)
+.|++++|+++ .+|..+..+..+.. +++++|.+.+ +|..+ ..+|++|+|++|+|++.+ ..+++|
T Consensus 390 ~~L~Ls~N~l~-~lp~~~~~~~~L~~-L~Ls~N~l~~-l~~~~---------~~~L~~L~Ls~N~l~~~~----~~l~~L 453 (549)
T 2z81_A 390 TSLDISRNTFH-PMPDSCQWPEKMRF-LNLSSTGIRV-VKTCI---------PQTLEVLDVSNNNLDSFS----LFLPRL 453 (549)
T ss_dssp CEEECTTCCCC-CCCSCCCCCTTCCE-EECTTSCCSC-CCTTS---------CTTCSEEECCSSCCSCCC----CCCTTC
T ss_pred CEEECCCCCCc-cCChhhcccccccE-EECCCCCccc-ccchh---------cCCceEEECCCCChhhhc----ccCChh
Confidence 77777777776 56666655555544 7777777653 22221 136888999999888643 578999
Q ss_pred CEEEccCcccccccchhhcCccCCCeeecccccCcccCCC-CccccCcccccccccccccCCc
Q 043388 412 KELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPT-KGVFSNKTKISLQVNVKLCGGI 473 (854)
Q Consensus 412 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~~c~~~ 473 (854)
++|+|++|+|+ .+|. ...+++|+.|||++|++++.+|. ...+.+...+.+.+|++.|.++
T Consensus 454 ~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 454 QELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp CEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred cEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99999999999 6776 46789999999999999998776 3567778888999999888643
No 39
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.7e-43 Score=418.35 Aligned_cols=166 Identities=23% Similarity=0.260 Sum_probs=131.6
Q ss_pred cCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcC
Q 043388 7 QIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICN 86 (854)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 86 (854)
.||+.+.. ++++|||++|+|++..|.+|.++++|++|+|++|+|+++.|++|+.+++|++|+|++|+|+++.+++|.+
T Consensus 45 ~vP~~lp~--~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSCT--TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCCc--CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 57776653 8999999999999777789999999999999999999888889999999999999999999888889999
Q ss_pred CCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcC
Q 043388 87 ISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQF 166 (854)
Q Consensus 87 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i 166 (854)
+++|++|+|++|+|+ .+|...|.++++|++|++++|.++.+ .+|..++++++|++|+|++|+|
T Consensus 123 L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~----------------~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 123 LSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF----------------KLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp CTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCC----------------CCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccC----------------CCchhhccchhhhhhcccCccc
Confidence 999999999999998 88888899999999999988876532 2355556666666666666666
Q ss_pred cccCCcCccccCCCC----eEeccccccc
Q 043388 167 KGKVSIDFSSLKNLW----WLNLEQNNLG 191 (854)
Q Consensus 167 ~~~~~~~f~~l~~L~----~L~L~~N~l~ 191 (854)
+++.+..|..+.+++ .++++.|.++
T Consensus 186 ~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 186 QSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp CEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred cccccccccchhhhhhhhhhhhcccCccc
Confidence 666555555444332 3445554443
No 40
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.6e-44 Score=408.38 Aligned_cols=252 Identities=19% Similarity=0.282 Sum_probs=205.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||++++++.+.. ..|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~ 230 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-----EMV 230 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-----EEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEE
Confidence 468999999999999999999999999999999997665555678899999999999999999999998765 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC--cccc-cccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD--MVAH-QNFS 703 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~~-~Dfg 703 (854)
+|||||+||+|.+++..... .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +..+ +|||
T Consensus 231 iv~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 99999999999999975432 689999999999999999999999 99999999999999854 4444 5999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
+|+.+..... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.... ..+..........
T Consensus 303 ~a~~~~~~~~----~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~~~i~~~~~~~-- 375 (573)
T 3uto_A 303 LTAHLDPKQS----VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLRNVKSCDWNM-- 375 (573)
T ss_dssp SCEECCTTSE----EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCC--
T ss_pred ceeEccCCCc----eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHhCCCCC--
Confidence 9998764332 22357999999999999999999999999999999999999999754221 1111111111100
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
++. ....++..+.+++.+||+.||.+|||+.|+++
T Consensus 376 ----~~~------------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 376 ----DDS------------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ----CSG------------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----Ccc------------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 00112445778999999999999999999986
No 41
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.6e-42 Score=390.62 Aligned_cols=375 Identities=19% Similarity=0.186 Sum_probs=284.0
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeecccccccc-cCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceee
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGG-QIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIY 94 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 94 (854)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+.+ +.+..|..+++|++|+|++|++++..|.+|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 578888888888887777788888888888888887763 3356778888888888888888877788888888888888
Q ss_pred ecccccccccC-cccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCcc-ccCCCCCCEEecCCCcCcccCCc
Q 043388 95 LTVNRFSGSLP-FDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDS-LSNASNLERLDLSGNQFKGKVSI 172 (854)
Q Consensus 95 L~~N~l~~~~~-~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~-~~~l~~L~~L~Ls~N~i~~~~~~ 172 (854)
|++|++++.+| ...|.++++|++|++++|++..+ .|.. |.++++|++|+|++|+++++.+.
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 172 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI-----------------QPASFFLNMRRFHVLDLTFNKVKSICEE 172 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC-----------------CCCGGGGGCTTCCEEECTTCCBSCCCTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCcc-----------------CcccccCCCCcccEEeCCCCcccccChh
Confidence 88888774333 34466777777777666665432 2444 77788888888888888888777
Q ss_pred Ccccc--CCCCeEecccccccCCCCCChhh--hhhccCCCCCcEEEcccCcCcccCChhhhhhc--ccccEEEccCCccc
Q 043388 173 DFSSL--KNLWWLNLEQNNLGMGTANDLDF--VTLLTNCSSLKALSLCDNQFGGELPHSIANLS--STMIQFRIGGNQIS 246 (854)
Q Consensus 173 ~f~~l--~~L~~L~L~~N~l~~~~~~~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~~L~~L~l~~N~l~ 246 (854)
.+..+ .+|+.|++++|.+..+....+.. ...+..+++|++|++++|++++..|..+.... ..++.|++++|.+.
T Consensus 173 ~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 252 (455)
T 3v47_A 173 DLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNM 252 (455)
T ss_dssp TSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTT
T ss_pred hhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccc
Confidence 77766 67888888888877665442211 11234557788888888888777777666541 35677777777655
Q ss_pred ccCCccccccccCCeeeccccccccCCCCCccCc--ccCceeeCccccccccCCccccCccccchhccccceecccCCCC
Q 043388 247 GTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGEL--QHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSS 324 (854)
Q Consensus 247 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 324 (854)
+.. +..+.+....+..|..+ ++|+.|++++|.+++..|..|..+++|+.|+|++|.+++..|..
T Consensus 253 ~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 318 (455)
T 3v47_A 253 GSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNA 318 (455)
T ss_dssp SCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred ccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhH
Confidence 321 12233333334444443 68999999999999889999999999999999999999888899
Q ss_pred CcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcc
Q 043388 325 LGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFS 404 (854)
Q Consensus 325 ~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~ 404 (854)
|.++++|+.|++++|++++..|.. +++ +.+|++|+|++|++++..|..
T Consensus 319 ~~~l~~L~~L~Ls~N~l~~~~~~~-------------------------~~~-------l~~L~~L~Ls~N~l~~~~~~~ 366 (455)
T 3v47_A 319 FWGLTHLLKLNLSQNFLGSIDSRM-------------------------FEN-------LDKLEVLDLSYNHIRALGDQS 366 (455)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGG-------------------------GTT-------CTTCCEEECCSSCCCEECTTT
T ss_pred hcCcccCCEEECCCCccCCcChhH-------------------------hcC-------cccCCEEECCCCcccccChhh
Confidence 999999999999999987433332 222 456999999999999998999
Q ss_pred cccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCCc
Q 043388 405 LGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKG 453 (854)
Q Consensus 405 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 453 (854)
|..+++|++|+|++|+|++..+..|..+++|+.|++++|+++|.+|...
T Consensus 367 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 367 FLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred ccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999999999999999998777888999999999999999999999643
No 42
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=372.23 Aligned_cols=266 Identities=23% Similarity=0.341 Sum_probs=214.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.++||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++.+.+ ..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-----RLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-----eeE
Confidence 368999999999999999999999899999999987666666778999999999999999999999998655 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 99999999999999987532 689999999999999999999999 9999999999999999887766 99999
Q ss_pred cccccCCCCCC-----------cccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHH
Q 043388 706 HQLDSASKTPS-----------SSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEF 774 (854)
Q Consensus 706 ~~~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~ 774 (854)
+.......... ......||+.|+|||++.+..++.++|||||||++|||++|..||.............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~ 235 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN 235 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh
Confidence 87754432211 1113579999999999999999999999999999999999999987543221110000
Q ss_pred hhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 775 VKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 775 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
... .........++..+.+++.+||+.||++|||+.|+++.|+.+.....+
T Consensus 236 ~~~--------------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 236 VRG--------------------------FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp HHH--------------------------HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred hhc--------------------------cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 000 000000112345678999999999999999999999999999876543
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-42 Score=403.56 Aligned_cols=395 Identities=20% Similarity=0.235 Sum_probs=249.7
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
..+++++++|+++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.|++|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3467777777777 4665554 677777777777776666677777777777777777777777777777777777777
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+|+ .+|.. .+++|++|++++|+++.+ .+|..|+++++|++|+|++|+|+. ..|..
T Consensus 109 ~N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l----------------~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~ 165 (562)
T 3a79_B 109 HNRLQ-NISCC---PMASLRHLDLSFNDFDVL----------------PVCKEFGNLTKLTFLGLSAAKFRQ---LDLLP 165 (562)
T ss_dssp TSCCC-EECSC---CCTTCSEEECCSSCCSBC----------------CCCGGGGGCTTCCEEEEECSBCCT---TTTGG
T ss_pred CCcCC-ccCcc---ccccCCEEECCCCCcccc----------------CchHhhcccCcccEEecCCCcccc---Cchhh
Confidence 77776 66654 566666666666554322 123445555555555555555443 22333
Q ss_pred cCCC--CeEecccccc--cCCCCCChhh--------------------hhhccCCCCCcEEEcccC--------------
Q 043388 177 LKNL--WWLNLEQNNL--GMGTANDLDF--------------------VTLLTNCSSLKALSLCDN-------------- 218 (854)
Q Consensus 177 l~~L--~~L~L~~N~l--~~~~~~~~~~--------------------~~~~~~l~~L~~L~L~~N-------------- 218 (854)
+++| ++|+|++|.+ +......+.. ...+..+++|+.|++++|
T Consensus 166 l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l 245 (562)
T 3a79_B 166 VAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSEL 245 (562)
T ss_dssp GTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHH
T ss_pred hhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHH
Confidence 3333 5555555544 2221111100 001222333333333333
Q ss_pred --------------cCcccC----ChhhhhhcccccEEEccCCcccccCCccc-----ccc-------------------
Q 043388 219 --------------QFGGEL----PHSIANLSSTMIQFRIGGNQISGTIPSGI-----RNL------------------- 256 (854)
Q Consensus 219 --------------~l~~~~----p~~~~~l~~~L~~L~l~~N~l~~~~~~~~-----~~l------------------- 256 (854)
.+.+.. +..+. . +.|++|++++|.+++.+|..+ .++
T Consensus 246 ~~l~~L~~L~L~~~~l~~~~~~~~~~~~~-~-~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~ 323 (562)
T 3a79_B 246 TRGPTLLNVTLQHIETTWKCSVKLFQFFW-P-RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEA 323 (562)
T ss_dssp HSCSSCEEEEEEEEEECHHHHHHHHHHHT-T-SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHH
T ss_pred hccCcceEEEecCCcCcHHHHHHHHHhhh-c-ccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhh
Confidence 322111 11111 1 157777777777776666655 333
Q ss_pred -------ccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceeccc--CCCCCcC
Q 043388 257 -------VNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGN--IPSSLGN 327 (854)
Q Consensus 257 -------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~ 327 (854)
.+|+.|++++|++.... .+..+++|++|++++|++++.+|..+.++++|+.|+|++|++++. +|..|.+
T Consensus 324 ~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 401 (562)
T 3a79_B 324 LYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKN 401 (562)
T ss_dssp HHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTT
T ss_pred hhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcC
Confidence 34666666666654321 126778888888888888877888888888888888888888853 3466788
Q ss_pred CCCCcccccCCCcccCccchhh-cchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccc
Q 043388 328 CQNLKGFDASHNKLTGAIPQQV-LSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLG 406 (854)
Q Consensus 328 l~~L~~L~ls~N~l~~~~p~~~-~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~ 406 (854)
+++|+.|++++|++++.+|... ..+..+.. +++++|.+++..|..+. .+|++|+|++|+|+ .+|..+.
T Consensus 402 l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~-L~l~~n~l~~~~~~~l~---------~~L~~L~L~~N~l~-~ip~~~~ 470 (562)
T 3a79_B 402 MSSLETLDVSLNSLNSHAYDRTCAWAESILV-LNLSSNMLTGSVFRCLP---------PKVKVLDLHNNRIM-SIPKDVT 470 (562)
T ss_dssp CTTCCEEECTTSCCBSCCSSCCCCCCTTCCE-EECCSSCCCGGGGSSCC---------TTCSEEECCSSCCC-CCCTTTT
T ss_pred CCCCCEEECCCCcCCCccChhhhcCcccCCE-EECCCCCCCcchhhhhc---------CcCCEEECCCCcCc-ccChhhc
Confidence 8888888888888886566653 34444443 78888888776665443 35888999999888 5666666
Q ss_pred cCCCCCEEEccCcccccccchh-hcCccCCCeeecccccCcccCCCCc
Q 043388 407 FMKSIKELNVSSNNLSGQIPEF-LQNLSFLEFLNLSYNHLEGEVPTKG 453 (854)
Q Consensus 407 ~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~~~ 453 (854)
.+++|++|+|++|+|++ +|.. |..+++|+.|++++|+++|.+|..+
T Consensus 471 ~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 517 (562)
T 3a79_B 471 HLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPGIR 517 (562)
T ss_dssp SSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHHHH
T ss_pred CCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcchHH
Confidence 88899999999999984 5544 8888889999999999988877543
No 44
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.9e-42 Score=365.97 Aligned_cols=250 Identities=22% Similarity=0.308 Sum_probs=206.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
..+|++.+.||+|+||.||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-----EEE
Confidence 357999999999999999999998899999999998776666788999999999999999999999998755 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||++
T Consensus 94 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999999999999764 578999999999999999999999 9999999999999998877776 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..........+.
T Consensus 164 ~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~---- 235 (297)
T 3fxz_A 164 AQITPEQSKR---STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPE---- 235 (297)
T ss_dssp EECCSTTCCB---CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCC----
T ss_pred eecCCccccc---CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCC----
Confidence 8776543322 23569999999999999999999999999999999999999997532211 111111110000
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~---------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 236 LQ---------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CS---------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CC---------------------CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 01122455789999999999999999999986
No 45
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.9e-43 Score=375.72 Aligned_cols=281 Identities=32% Similarity=0.516 Sum_probs=222.9
Q ss_pred HHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCC
Q 043388 542 ELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 542 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 621 (854)
++..++++|++.+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN--- 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT---
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC---
Confidence 34456789999999999999999999976 68899999988766666788999999999999999999999987654
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
..++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++
T Consensus 109 --~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~ 181 (321)
T 2qkw_B 109 --EMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKIT 181 (321)
T ss_dssp --CCEEEEECCTTCBTGGGSSSSCCC--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEEC
T ss_pred --eEEEEEEcCCCCcHHHHHhccCCC--ccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEe
Confidence 679999999999999999765422 22689999999999999999999999 9999999999999999887776
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC-chHhHHhhhc-
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG-LTLHEFVKMT- 778 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~-~~~~~~~~~~- 778 (854)
|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+....
T Consensus 182 Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~ 260 (321)
T 2qkw_B 182 DFGISKKGTELDQTH-LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260 (321)
T ss_dssp CCTTCEECSSSSCCC-CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHH
T ss_pred ecccccccccccccc-cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcc
Confidence 999998765433221 1223458999999999988899999999999999999999999998654322 2222222211
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
........+++... .....+++..+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 261 ~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 261 NNGQLEQIVDPNLA--------------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TTTCCCSSSSSSCT--------------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccccHHHhcChhhc--------------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 11222233332221 111234577899999999999999999999999999988754
No 46
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.8e-42 Score=367.80 Aligned_cols=281 Identities=24% Similarity=0.384 Sum_probs=210.0
Q ss_pred HhhccccCccCCCcceEEEEeE----ECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGI----LGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|++.+.||+|+||.||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR--- 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH---
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC---
Confidence 3689999999999999999999 455789999999986666666789999999999999999999999865432
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
...++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 157999999999999999987642 589999999999999999999999 9999999999999998876666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||++.................+|..|+|||.+.+..++.++|||||||++|||+||..||...... +.......
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~------~~~~~~~~ 231 (295)
T 3ugc_A 158 FGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMRMIGND 231 (295)
T ss_dssp CCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH------HHHHHCTT
T ss_pred CcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH------HHhhhcCc
Confidence 999988765443322233345788899999999889999999999999999999999998743211 11110000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
.............. ....+.+....++.++.+++.+||+.||++|||+.|+++.|+++.+++.
T Consensus 232 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 232 KQGQMIVFHLIELL------KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp CCTHHHHHHHHHHH------HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred cccchhHHHHHHHH------hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 00000000000000 0011111223446778999999999999999999999999999987754
No 47
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.7e-42 Score=373.81 Aligned_cols=288 Identities=34% Similarity=0.586 Sum_probs=229.0
Q ss_pred cCCcccHHHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEE
Q 043388 534 QFPMISYAELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIIT 612 (854)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 612 (854)
....+++.++....++|.+.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 4567888999999999999999999999999999865 688999999975432 23347899999999999999999999
Q ss_pred EeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe
Q 043388 613 ICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 692 (854)
Q Consensus 613 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 692 (854)
++.... ..++||||+++|+|.+++...... ...+++..+..|+.|++.||+|||+.+.++|+||||||+||++
T Consensus 95 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 95 FCMTPT-----ERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167 (326)
T ss_dssp EECCSS-----CCEEEEECCTTCBHHHHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred EEecCC-----ceEEEEEeccCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence 997655 579999999999999999876432 2258999999999999999999999877799999999999999
Q ss_pred cCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcc---cCC
Q 043388 693 DHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAF---TEG 768 (854)
Q Consensus 693 ~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~---~~~ 768 (854)
+.++..++ |||.+.......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+... ...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~ 245 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSSSCE--ECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSC
T ss_pred CCCCCEEeccCccccccCcccccc--cccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccc
Confidence 99877666 999998775443221 223469999999999988889999999999999999999999997431 223
Q ss_pred chHhHHhhhcCCcc-cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 769 LTLHEFVKMTLPEK-VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 769 ~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
.....+........ .....+.... ......++..+.+++.+||+.||++|||+.||++.|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 246 VMLLDWVKGLLKEKKLEALVDVDLQ--------------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SBHHHHHTTTTSSCCSTTSSCTTCT--------------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred hhHHHHHHHHhhchhhhhhcChhhc--------------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 34444544433332 2233332221 111234467899999999999999999999999999753
No 48
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=369.84 Aligned_cols=263 Identities=26% Similarity=0.389 Sum_probs=208.2
Q ss_pred hhccccCccCCCcceEEEEeEECCC---ceEEEEEEeecc-cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGE---EMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.+|.+.+.||+|+||.||+|++..+ +..||||+++.. .....+.+.+|++++++++||||+++++++.+..
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----- 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 5789999999999999999999744 456999999754 2334567899999999999999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++..... .+++.+++.|+.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 195 (325)
T 3kul_A 124 LAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDF 195 (325)
T ss_dssp CCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred ccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCC
Confidence 67999999999999999976532 689999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|+++................+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+......
T Consensus 196 g~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~~ 273 (325)
T 3kul_A 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEGYRL 273 (325)
T ss_dssp SSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTCCC
T ss_pred CcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCCC
Confidence 999987655443333334457889999999988889999999999999999999 99999754221 111111110000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
+....++..+.+++..||+.||++|||+.||++.|+.+.+...+
T Consensus 274 --------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 274 --------------------------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp --------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred --------------------------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 00112255688999999999999999999999999998876543
No 49
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.8e-41 Score=362.48 Aligned_cols=263 Identities=21% Similarity=0.290 Sum_probs=213.2
Q ss_pred CCcccHHHHHHHHhh----------ccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccC
Q 043388 535 FPMISYAELSKATSE----------FASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRH 604 (854)
Q Consensus 535 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 604 (854)
.+.++++++..+++. |...+.||+|+||.||+|++..+++.||||+++.......+.+.+|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 356788888888864 7778899999999999999998999999999987766667889999999999999
Q ss_pred CCeeeEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeec
Q 043388 605 RNLIKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGD 684 (854)
Q Consensus 605 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 684 (854)
|||+++++++...+ ..++||||+++|+|.+++... .+++.++..++.|++.||+|||+. +|+|||
T Consensus 102 ~niv~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 166 (321)
T 2c30_A 102 FNVVEMYKSYLVGE-----ELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRD 166 (321)
T ss_dssp TTBCCEEEEEEETT-----EEEEEECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CCcceEEEEEEECC-----EEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence 99999999998755 689999999999999998753 689999999999999999999999 999999
Q ss_pred CCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 043388 685 LKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDA 763 (854)
Q Consensus 685 lkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~ 763 (854)
|||+||+++.++..++ |||++.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 167 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECCSSSCCB---CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCHHHEEECCCCcEEEeeeeeeeecccCcccc---ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999998877776 999998775533221 235699999999999999999999999999999999999999975
Q ss_pred cccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 764 AFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.... ............... ....++..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~--~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 244 DSPV--QAMKRLRDSPPPKLK------------------------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp SCHH--HHHHHHHHSSCCCCT------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCHH--HHHHHHhcCCCCCcC------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3211 111111111110000 001124457889999999999999999999874
No 50
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1e-41 Score=365.88 Aligned_cols=248 Identities=24% Similarity=0.356 Sum_probs=202.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK-----T 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----E
Confidence 468999999999999999999998899999999997543 234567889999999999999999999997655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred EEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeecc
Confidence 899999999999999998764 689999999999999999999999 9999999999999999887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCC-ccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEAS-MTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
++........ ....+||+.|+|||++.+..++ .++||||+||++|||++|+.||..... .+.........
T Consensus 160 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~ 230 (328)
T 3fe3_A 160 FSNEFTVGGK----LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-----KELRERVLRGK 230 (328)
T ss_dssp CCGGGSSSCG----GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCC
T ss_pred CceecCCCCc----cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC
Confidence 9987654322 2235799999999999887764 899999999999999999999975421 11111100000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. . . | ..++..+.+++.+||+.||.+|||+.|+++.
T Consensus 231 ~-~-~-p---------------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 Y-R-I-P---------------------FYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp C-C-C-C---------------------TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C-C-C-C---------------------CCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0 0 0 0113457789999999999999999999763
No 51
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9.1e-42 Score=366.77 Aligned_cols=282 Identities=23% Similarity=0.317 Sum_probs=209.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
..+|++.++||+|+||.||+|++. ++.||||+++.... ......+|+.++++++||||+++++++..... .....+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTS-VDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCC-CCceEE
Confidence 368999999999999999999986 68899999965432 23456678999999999999999999976542 123579
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEeecCCCCceEecCCcccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC-------QPPIVHGDLKPSNVLLDHDMVAH 699 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~-------~~~ivH~Dlkp~NIll~~~~~~~ 699 (854)
+||||+++|+|.+++... .+++.+++.++.|++.||+|||+.+ .++|+||||||+||+++.++..+
T Consensus 99 lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 999999999999999764 5899999999999999999999862 34899999999999999987777
Q ss_pred c-ccccccccccCCCCCCcccccCCcccccCccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch-Hh
Q 043388 700 Q-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-----SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT-LH 772 (854)
Q Consensus 700 ~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~-~~ 772 (854)
+ |||+++......... ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||......... ..
T Consensus 172 L~DFg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~ 250 (322)
T 3soc_A 172 IADFGLALKFEAGKSAG-DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250 (322)
T ss_dssp ECCCTTCEEECTTSCCC-CCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTH
T ss_pred EccCCcccccccccCcc-ccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchh
Confidence 6 999998776544322 2233569999999999887 34677899999999999999999999865432211 11
Q ss_pred HHhhhcCCcccccccCchhhHHH-hhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 773 EFVKMTLPEKVIEIVDPSLLMEV-MANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 773 ~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
..... .+ ........ .................++.++.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 251 ~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 251 EEIGQ-HP-------SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHCS-SC-------CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhcc-CC-------chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 10000 00 00000000 00000000000001123466789999999999999999999999999998764
No 52
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=367.03 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=194.8
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~~ 83 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN-----KI 83 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----EE
Confidence 478999999999999999999999899999999997543 233467899999999999999999999997655 78
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++..++ |||+
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~ 154 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGL 154 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccC
Confidence 99999999999999998754 689999999999999999999999 9999999999999999877776 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
+.......... ....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ........... ..
T Consensus 155 a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~--~~ 229 (347)
T 3zgw_A 155 CAKPKGNKDYH--LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKIMRGKY--DV 229 (347)
T ss_dssp CBC----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC--CC
T ss_pred cccccCCCCcc--ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCC--CC
Confidence 88665432211 223569999999999988775 89999999999999999999999753211 01111111100 00
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
+ ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 230 -----p---------------------~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 -----P---------------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -----C---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -----C---------------------CCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 0113456789999999999999999999864
No 53
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.8e-41 Score=359.92 Aligned_cols=266 Identities=21% Similarity=0.333 Sum_probs=204.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHh--ccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++..... ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~-~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH-SSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET-TEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC-CCce
Confidence 46899999999999999999998 4788999998643 23556677777777 799999999999765432 2336
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeecCCCCceEecCCc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--------HHCQPPIVHGDLKPSNVLLDHDM 696 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~ 696 (854)
.++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred eEEehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 79999999999999999643 6899999999999999999999 77 999999999999999888
Q ss_pred cccc-ccccccccccCCCCC-CcccccCCcccccCccccCCC------CCCccchhHHHHHHHHHHHhC----------C
Q 043388 697 VAHQ-NFSLSHQLDSASKTP-SSSIGIKGTVGYVAPEYGMGS------EASMTGDVYSFGILLLEMFTG----------R 758 (854)
Q Consensus 697 ~~~~-Dfg~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvvl~elltg----------~ 758 (854)
..++ |||+++......... .......||+.|+|||++.+. .++.++|||||||++|||+|| +
T Consensus 151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 7776 999998765543321 112234699999999998876 456799999999999999999 8
Q ss_pred CCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHH
Q 043388 759 RPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDV 838 (854)
Q Consensus 759 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 838 (854)
.||...........................+. .....++..+.+++.+||+.||++|||+.||
T Consensus 231 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 293 (301)
T 3q4u_A 231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR-----------------WFSDPTLTSLAKLMKECWYQNPSARLTALRI 293 (301)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-----------------GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ccccccCCCCcchhhhhHHHhccCCCCCCChh-----------------hccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence 88866544333333332222111111111100 0112346779999999999999999999999
Q ss_pred HHHHHhh
Q 043388 839 VAKLCHT 845 (854)
Q Consensus 839 l~~L~~~ 845 (854)
++.|+++
T Consensus 294 ~~~L~~i 300 (301)
T 3q4u_A 294 KKTLTKI 300 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHhcc
Confidence 9999875
No 54
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.6e-41 Score=396.24 Aligned_cols=433 Identities=21% Similarity=0.191 Sum_probs=302.4
Q ss_pred cCchhhhcCC---CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhh
Q 043388 7 QIPEEIGSLL---NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRW 83 (854)
Q Consensus 7 ~~p~~~~~l~---~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 83 (854)
.+|+....+. .-.+.+.++-+++ .+|..+. +++++|||++|+|+++.+.+|..+++|++|+|++|+|+++.|++
T Consensus 19 ~~p~~~~~c~~~~~~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~ 95 (635)
T 4g8a_A 19 SIPESWEPCVEVVPNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 95 (635)
T ss_dssp ------CCSEEEETTTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred CCCCCCCCccccCCCCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhH
Confidence 4676665442 2356789998999 7887775 58999999999999888899999999999999999999999999
Q ss_pred hcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCC
Q 043388 84 ICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSG 163 (854)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~ 163 (854)
|.++++|++|+|++|+|+ .+|.++|.++++|++|++++|+++.+ .+..|+++++|++|+|++
T Consensus 96 f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l-----------------~~~~~~~L~~L~~L~Ls~ 157 (635)
T 4g8a_A 96 YQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASL-----------------ENFPIGHLKTLKELNVAH 157 (635)
T ss_dssp TTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCS-----------------TTCCCTTCTTCCEEECCS
T ss_pred hcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCC-----------------ChhhhhcCcccCeecccc
Confidence 999999999999999999 89999999999999999998887654 245699999999999999
Q ss_pred CcCccc-CCcCccccCCCCeEecccccccCCCCCChhhhhhccCCC-CCcEEEcccCcCcccCChhhhhh----------
Q 043388 164 NQFKGK-VSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCS-SLKALSLCDNQFGGELPHSIANL---------- 231 (854)
Q Consensus 164 N~i~~~-~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l---------- 231 (854)
|+|+.+ .|..+..+++|++|+|++|+|+.+....+... ..+. .+..++++.|.++...+..+...
T Consensus 158 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L---~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n 234 (635)
T 4g8a_A 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL---HQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNN 234 (635)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH---HTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESC
T ss_pred CccccCCCchhhccchhhhhhcccCccccccccccccch---hhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcc
Confidence 999875 46788999999999999999987765433221 1111 12234444444432111111110
Q ss_pred ----------------------------------------------------------------------cccccEEEcc
Q 043388 232 ----------------------------------------------------------------------SSTMIQFRIG 241 (854)
Q Consensus 232 ----------------------------------------------------------------------~~~L~~L~l~ 241 (854)
...+..+.+.
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 314 (635)
T 4g8a_A 235 FDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLV 314 (635)
T ss_dssp CSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEE
T ss_pred cccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccc
Confidence 0011112222
Q ss_pred CCcccccCCccccccccCCeeeccccccccCCCC-------------------CccCcccCceeeCccccccc-------
Q 043388 242 GNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPD-------------------GVGELQHLQQLYMFRNFLQG------- 295 (854)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-------------------~~~~l~~L~~L~L~~N~l~~------- 295 (854)
+|.+... ..+....+|+.|++.+|.+....+. .+..+++|+.|++++|.+..
T Consensus 315 ~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~ 392 (635)
T 4g8a_A 315 SVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQS 392 (635)
T ss_dssp SCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHH
T ss_pred ccccccc--cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccc
Confidence 2221110 0112222333344443333322111 12234455555555555431
Q ss_pred ------------------cCCccccCccccchhccccceecccCC-CCCcCCCCCcccccCCCcccCccchhhcchhhhH
Q 043388 296 ------------------SIPPSLGNLTKLADLALSFNNLQGNIP-SSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLS 356 (854)
Q Consensus 296 ------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~ 356 (854)
..+..+..+++|+.+++++|+.....+ ..|..+++++.++++.|.+.+..|..+.....+.
T Consensus 393 ~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~ 472 (635)
T 4g8a_A 393 DFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 472 (635)
T ss_dssp HHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred hhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhh
Confidence 233445666777777777776664433 4577788888888888888866666665555554
Q ss_pred HHHHhhcCCCC-CCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCC
Q 043388 357 VYLALAHNLLN-DSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFL 435 (854)
Q Consensus 357 ~~l~l~~n~l~-~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 435 (854)
. +++++|.+. +..|..+.. +.+|++|+|++|+|++.+|.+|+.+++|++|+|++|+|++..|..|..+++|
T Consensus 473 ~-L~Ls~N~~~~~~~~~~~~~-------l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 544 (635)
T 4g8a_A 473 V-LKMAGNSFQENFLPDIFTE-------LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 544 (635)
T ss_dssp E-EECTTCEEGGGEECSCCTT-------CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTC
T ss_pred h-hhhhhcccccccCchhhhh-------ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCC
Confidence 4 788888644 345666666 5579999999999999999999999999999999999998889999999999
Q ss_pred CeeecccccCcccCCCCc-cc-cCcccccccccccccCCc
Q 043388 436 EFLNLSYNHLEGEVPTKG-VF-SNKTKISLQVNVKLCGGI 473 (854)
Q Consensus 436 ~~L~ls~N~l~~~~p~~~-~~-~~~~~~~~~~n~~~c~~~ 473 (854)
++|||++|+|++..|..- .+ .+...+.+.+|++.|.+.
T Consensus 545 ~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 545 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999999999887642 22 567778899999999754
No 55
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.7e-41 Score=360.35 Aligned_cols=260 Identities=26% Similarity=0.362 Sum_probs=198.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
..+|++.+.||+|+||.||+|++. +..||||++.... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 108 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-----N 108 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT-----C
T ss_pred hhHceeeeEeecCCCeEEEEEEEC--CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----c
Confidence 568999999999999999999884 7789999986543 233467889999999999999999999997655 5
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCceEecCCccccc-c
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++..++ |
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~D 182 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCD 182 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECC
T ss_pred eEEEEecCCCCcHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECC
Confidence 7999999999999999986541 12589999999999999999999999 8 999999999999999877766 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 183 fg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~ 257 (309)
T 3p86_A 183 FGLSRLKASTFLS---SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKCKR 257 (309)
T ss_dssp CC--------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSCCC
T ss_pred CCCCccccccccc---cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCC
Confidence 9999865443221 12346999999999999999999999999999999999999999754221 111111100000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
. .....++..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 258 ~-------------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 258 L-------------------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp C-------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred C-------------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0 000112455789999999999999999999999999887653
No 56
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.5e-41 Score=367.15 Aligned_cols=266 Identities=24% Similarity=0.390 Sum_probs=211.0
Q ss_pred HhhccccCccCCCcceEEEEeEEC-------CCceEEEEEEeeccc-ccchHHHHHHHHHHHhc-cCCCeeeEEEEeecc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILG-------GEEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSSI 617 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 617 (854)
.++|.+.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++++ +||||++++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 368999999999999999999873 356789999997543 23456789999999999 899999999998765
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCc----------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKP 687 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 687 (854)
+ ..|+||||+++|+|.+++...... .....+++.+++.++.||+.||+|||++ +|+||||||
T Consensus 160 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 160 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred C-----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 5 679999999999999999875421 1112588999999999999999999999 999999999
Q ss_pred CceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcc
Q 043388 688 SNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAF 765 (854)
Q Consensus 688 ~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~ 765 (854)
+||+++.++..++ |||+++......... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCTTC-TTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hhEEECCCCCEEEccccCCcccCccccee-cccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999998887776 999998775543222 1223457899999999999999999999999999999999 999997542
Q ss_pred cCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 766 TEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
.. ............ .....++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 311 ~~--~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 311 VE--ELFKLLKEGHRM--------------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp GG--GHHHHHHTTCCC--------------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH--HHHHHHhcCCCC--------------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 21 111111111000 00112345688999999999999999999999999998
Q ss_pred hhhh
Q 043388 846 RETF 849 (854)
Q Consensus 846 ~~~~ 849 (854)
....
T Consensus 363 l~~~ 366 (370)
T 2psq_A 363 LTLT 366 (370)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7643
No 57
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-41 Score=372.68 Aligned_cols=261 Identities=26% Similarity=0.422 Sum_probs=196.2
Q ss_pred hhccccCccCCCcceEEEEeEEC---CCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILG---GEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.+|.+.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+.++++++||||+++++++....
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK----- 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----
Confidence 57999999999999999999886 467789999997543 334567999999999999999999999997654
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 67999999999999999986532 689999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|+++................+|+.|+|||++.+..++.++|||||||++||+++ |+.||...... .....+.....
T Consensus 192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~~~- 268 (373)
T 2qol_A 192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYR- 268 (373)
T ss_dssp ----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTTEE-
T ss_pred ccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-
Confidence 999877654332222223346788999999998899999999999999999998 99999753211 11111110000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.+....++..+.+++.+||+.||++||++.||++.|+++....
T Consensus 269 -------------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 -------------------------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -------------------------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -------------------------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0001123556889999999999999999999999999987643
No 58
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.5e-40 Score=355.39 Aligned_cols=283 Identities=30% Similarity=0.459 Sum_probs=220.1
Q ss_pred cCCcccHHHHHHHHhhcccc------CccCCCcceEEEEeEECCCceEEEEEEeecc----cccchHHHHHHHHHHHhcc
Q 043388 534 QFPMISYAELSKATSEFASS------NMIGQGSFGSVYKGILGGEEMIVAVKVINLK----QKGAFRSFVAECEALRNIR 603 (854)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~ 603 (854)
....|++.++..++.+|... +.||+|+||.||+|.+ ++..||||++... .....+.+.+|+.++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 35678999999999999887 8999999999999987 4778999998643 2334567899999999999
Q ss_pred CCCeeeEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEee
Q 043388 604 HRNLIKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHG 683 (854)
Q Consensus 604 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~ 683 (854)
||||+++++++...+ ..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+. +|+||
T Consensus 89 h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~ 157 (307)
T 2nru_A 89 HENLVELLGFSSDGD-----DLCLVYVYMPNGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHEN---HHIHR 157 (307)
T ss_dssp CTTBCCEEEEECSSS-----SCEEEEECCTTCBHHHHHHTGGG---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCeEEEEEEEecCC-----ceEEEEEecCCCcHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecC
Confidence 999999999987654 67999999999999999975432 12689999999999999999999999 99999
Q ss_pred cCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 043388 684 DLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTD 762 (854)
Q Consensus 684 Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~ 762 (854)
||||+||+++.++..++ |||.+.......... ......||+.|+|||.+.+ .++.++|||||||++|||++|+.||.
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~ 235 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFAQTV-MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVD 235 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCSSCE-ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBC
T ss_pred CCCHHHEEEcCCCcEEEeecccccccccccccc-cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcc
Confidence 99999999999876666 999998765433221 1223469999999998865 58899999999999999999999998
Q ss_pred CcccCCchHhHHhhhcC--CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 763 AAFTEGLTLHEFVKMTL--PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 763 ~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
....... ...+..... ...+.+.+++.. ......++..+.+++.+||+.||.+|||+.||++
T Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 236 EHREPQL-LLDIKEEIEDEEKTIEDYIDKKM---------------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp TTBSSSB-TTHHHHHHHTTSCCHHHHSCSSC---------------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cCcchHH-HHHHHHHhhhhhhhhhhhccccc---------------cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6543221 111111100 001111111111 1112344677899999999999999999999999
Q ss_pred HHHhhhh
Q 043388 841 KLCHTRE 847 (854)
Q Consensus 841 ~L~~~~~ 847 (854)
.|+++..
T Consensus 300 ~L~~l~~ 306 (307)
T 2nru_A 300 LLQEMTA 306 (307)
T ss_dssp HHHHHC-
T ss_pred HHHHHhc
Confidence 9998764
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3e-41 Score=362.32 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=203.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+ ..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----eE
Confidence 4689999999999999999999999999999999975432 23456889999999999999999999987655 78
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 99999999999999997654 689999999999999999999999 9999999999999999877766 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
+..+....... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||............+.........
T Consensus 152 a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (323)
T 3tki_A 152 ATVFRYNNRER-LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP 230 (323)
T ss_dssp CEECEETTEEC-CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTT
T ss_pred cceeccCCccc-ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCc
Confidence 98765432211 1223579999999999988765 789999999999999999999998654433333333221111000
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
...+...+.+++.+||+.||++|||+.|+++.
T Consensus 231 --------------------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 --------------------------WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01124457789999999999999999999764
No 60
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.6e-41 Score=363.39 Aligned_cols=251 Identities=21% Similarity=0.309 Sum_probs=203.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc------chHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG------AFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.+.|.+.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 46799999999999999999999999999999999754321 3467899999999999999999999997655
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 696 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 89 ---DVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp ---EEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred ---EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 7899999999999999997654 689999999999999999999999 999999999999998765
Q ss_pred -ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 697 -VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 697 -~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
++++|||++......... ....||+.|+|||++.+..++.++||||+||++|+|++|..||...... ..+..+.
T Consensus 157 ~vkl~DFG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~i~ 231 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANIT 231 (361)
T ss_dssp CEEECCCSSCEECCTTCCC----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHH
T ss_pred CEEEEecCCceEcCCCCcc----ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 344599999877653322 2356999999999999989999999999999999999999999754211 1111111
Q ss_pred hhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 776 KMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 776 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..... .++. ....++..+.+++..||..||++|||+.|+++
T Consensus 232 ~~~~~------~~~~------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 232 AVSYD------FDEE------------------FFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp TTCCC------CCHH------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hcCCC------CCch------------------hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11000 0000 11122456789999999999999999999975
No 61
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.7e-41 Score=355.59 Aligned_cols=261 Identities=22% Similarity=0.412 Sum_probs=204.9
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++|++.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+ .
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 85 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD-----C 85 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----E
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----e
Confidence 579999999999999999999998999999999864332 23467889999999999999999999987655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 86 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 86 YYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp EEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred EEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 899999999999999998764 689999999999999999999999 9999999999999998887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
++.......... .....||+.|+|||.+.+..++.++||||+||++|||+||+.||.......... .......+.
T Consensus 157 ~~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~~-- 231 (294)
T 4eqm_A 157 IAKALSETSLTQ--TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHIQDSVPN-- 231 (294)
T ss_dssp SSTTC---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-HHHSSCCCC--
T ss_pred Cccccccccccc--cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhhccCCC--
Confidence 998775443222 223469999999999999999999999999999999999999997542211111 111100000
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-CHHHHHHHHHhhhhh
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-EMRDVVAKLCHTRET 848 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~ 848 (854)
. ......+++..+.+++.+|++.||++|| +++++.+.|+++...
T Consensus 232 -------~--------------~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 232 -------V--------------TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp -------H--------------HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred -------c--------------chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 0 0001112356688999999999999999 899999999887543
No 62
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=9.7e-41 Score=359.23 Aligned_cols=249 Identities=25% Similarity=0.329 Sum_probs=203.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|++.+.||+|+||.||+|+...+++.||+|+++.. .......+.+|+.+++.++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----- 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC-----
Confidence 46899999999999999999999999999999999753 3345577899999999999999999999997765
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++..++ ||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 7899999999999999998654 689999999999999999999999 9999999999999998887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|+++........ ....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.. ..
T Consensus 150 G~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~---~~ 221 (337)
T 1o6l_A 150 GLCKEGISDGAT---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILM---EE 221 (337)
T ss_dssp TTCBCSCCTTCC---BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---CC
T ss_pred cchhhcccCCCc---ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHHHc---CC
Confidence 999864432221 22356999999999999999999999999999999999999999753211 11111100 00
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----CHHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-----EMRDVVAK 841 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 841 (854)
. . . +..++.++.+++.+||+.||++|| +++|+++.
T Consensus 222 ~-~-~----------------------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 I-R-F----------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp C-C-C----------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred C-C-C----------------------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 0 0 001245578899999999999999 89988763
No 63
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.3e-41 Score=373.52 Aligned_cols=261 Identities=25% Similarity=0.377 Sum_probs=209.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~ 187 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PI 187 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS-----SC
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC-----Cc
Confidence 4689999999999999999999998899999999875422 23356889999999999999999999997654 57
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++..++ |||+
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 999999999999999986532 689999999999999999999999 9999999999999998887776 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
++.......... .....+++.|+|||.+.+..++.++|||||||++|||+| |+.||...... ...+.+.....
T Consensus 260 s~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~--- 333 (377)
T 3cbl_A 260 SREEADGVYAAS-GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGGR--- 333 (377)
T ss_dssp CEECTTSEEECC-SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTCC---
T ss_pred ceecCCCceeec-CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC---
Confidence 986543321111 111235778999999988889999999999999999998 99999754221 11111111100
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.+....++.++.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 334 -----------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 334 -----------------------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp -----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -----------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 0011123556889999999999999999999999999987653
No 64
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8.6e-41 Score=356.26 Aligned_cols=263 Identities=28% Similarity=0.416 Sum_probs=201.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.++||+|+||.||+|++.. .+|+|+++... ....+.+.+|++++++++||||+++++++... .
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------N 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------S
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC------c
Confidence 3578999999999999999998863 38888886533 23456789999999999999999999987532 3
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++|+|.+++..... .+++.+++.|+.||+.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg 177 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCC
T ss_pred EEEEEecCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCC
Confidence 6899999999999999975532 689999999999999999999999 9999999999999999877776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGM---GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
++.......... ......||+.|+|||++. +..++.++|||||||++|||++|+.||...................
T Consensus 178 ~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 256 (307)
T 3lb7_A 178 LATVKSRWSGSQ-QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYAS 256 (307)
T ss_dssp SSCC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCC
T ss_pred Cceecccccccc-cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCC
Confidence 998654322211 112346999999999886 5668999999999999999999999997543221111111111111
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
..... ....++..+.+++.+||+.||++|||+.|+++.++.+...+.
T Consensus 257 ~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 257 PDLSK-----------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp CCSTT-----------------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred cchhh-----------------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 11100 011235568899999999999999999999999999887653
No 65
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=356.41 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=202.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc------cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK------GAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.+.|.+.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 87 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT-- 87 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC--
Confidence 4679999999999999999999998999999999975432 13577899999999999999999999997655
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 696 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 88 ---~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 88 ---DVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp ---EEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred ---EEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 7899999999999999997654 689999999999999999999999 999999999999998876
Q ss_pred -ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 697 -VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 697 -~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
++++|||++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 156 ~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~ 230 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANVS 230 (326)
T ss_dssp CEEECCCTTCEECCTTSCC----CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHH
T ss_pred CEEEEECCCCeECCCCCcc----ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHH
Confidence 344599999877543322 2346999999999999889999999999999999999999999753211 0111111
Q ss_pred hhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 776 KMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 776 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..... .. ......++..+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~------~~------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 231 AVNYE------FE------------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HTCCC------CC------------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hcCCC------cC------------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 10000 00 0011122456789999999999999999999986
No 66
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2e-40 Score=371.71 Aligned_cols=375 Identities=26% Similarity=0.303 Sum_probs=266.7
Q ss_pred chhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCC-------------cEEeccccc
Q 043388 9 PEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNL-------------VYLNVAENQ 75 (854)
Q Consensus 9 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-------------~~L~Ls~N~ 75 (854)
|+.+. .++|++|++++|.+ +.+|.+++++++|++|++++|++++.+|..++.+++| ++|++++|.
T Consensus 5 p~~~~-~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~ 82 (454)
T 1jl5_A 5 PRNVS-NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLG 82 (454)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSC
T ss_pred ccccc-cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCc
Confidence 44454 58899999999999 5899999999999999999999998999999988865 999999999
Q ss_pred CcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCC-------CCceeeccCccCCCCCCCCCCc
Q 043388 76 FSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLK-------NLWWLNLEQNNLGMGTASSIPD 148 (854)
Q Consensus 76 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~-------~L~~L~L~~N~l~~~~~~~~p~ 148 (854)
+++ +|.. .++|++|+|++|+++ .+|.. +++|++|++++|+++ +|++|++++|++ +.+|
T Consensus 83 l~~-lp~~---~~~L~~L~l~~n~l~-~lp~~----~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l-----~~lp- 147 (454)
T 1jl5_A 83 LSS-LPEL---PPHLESLVASCNSLT-ELPEL----PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQL-----EKLP- 147 (454)
T ss_dssp CSC-CCSC---CTTCSEEECCSSCCS-SCCCC----CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCC-----SSCC-
T ss_pred ccc-CCCC---cCCCCEEEccCCcCC-ccccc----cCCCcEEECCCCccCcccCCCCCCCEEECcCCCC-----CCCc-
Confidence 986 4442 478999999999998 57742 488999999988764 688999999998 4577
Q ss_pred cccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhh
Q 043388 149 SLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSI 228 (854)
Q Consensus 149 ~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 228 (854)
.|+++++|++|++++|++++++ .. ..+|++|++++|+++.++ .+.++++|++|++++|++++ +|...
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~lp-~~---~~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~~N~l~~-l~~~~ 214 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKKLP-DL---PPSLEFIAAGNNQLEELP--------ELQNLPFLTAIYADNNSLKK-LPDLP 214 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSCCC-CC---CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECCSSCCSS-CCCCC
T ss_pred ccCCCCCCCEEECCCCcCcccC-CC---cccccEEECcCCcCCcCc--------cccCCCCCCEEECCCCcCCc-CCCCc
Confidence 5999999999999999999754 33 359999999999998653 37899999999999999984 55432
Q ss_pred hhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccc
Q 043388 229 ANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLA 308 (854)
Q Consensus 229 ~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 308 (854)
..|+.|++++|.++ .+| .|..+++|++|++++|+++++ |.. +++|+.|++++|++++ +|.. .++|+
T Consensus 215 ----~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~ 280 (454)
T 1jl5_A 215 ----LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PDL---PPSLEALNVRDNYLTD-LPEL---PQSLT 280 (454)
T ss_dssp ----TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CSC---CTTCCEEECCSSCCSC-CCCC---CTTCC
T ss_pred ----CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-ccc---ccccCEEECCCCcccc-cCcc---cCcCC
Confidence 37999999999999 667 499999999999999999964 432 4799999999999996 5554 37899
Q ss_pred hhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccc
Q 043388 309 DLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLE 388 (854)
Q Consensus 309 ~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~ 388 (854)
.|++++|++++. |.. .++|+.|++++|++++ ++... ..+ +.+++++|.+.+ +|.. +.+|+
T Consensus 281 ~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~~---~~L-~~L~Ls~N~l~~-lp~~----------~~~L~ 340 (454)
T 1jl5_A 281 FLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDLP---PSL-EELNVSNNKLIE-LPAL----------PPRLE 340 (454)
T ss_dssp EEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCCC---TTC-CEEECCSSCCSC-CCCC----------CTTCC
T ss_pred EEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCCc---CcC-CEEECCCCcccc-cccc----------CCcCC
Confidence 999999999963 321 2689999999999984 44221 123 238899999986 5543 34699
Q ss_pred eeeccCcccccCCCcccccCCCCCEEEccCccccc--ccchhhcCc-------------cCCCeeecccccCcc--cCCC
Q 043388 389 YLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSG--QIPEFLQNL-------------SFLEFLNLSYNHLEG--EVPT 451 (854)
Q Consensus 389 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l-------------~~L~~L~ls~N~l~~--~~p~ 451 (854)
+|++++|++++ +|. .+++|++|++++|++++ .+|.++.++ ++|+.||+++|++++ .+|.
T Consensus 341 ~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 341 RLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp EEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------------
T ss_pred EEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh
Confidence 99999999995 555 47899999999999998 788999888 889999999999998 6664
No 67
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.8e-41 Score=349.37 Aligned_cols=256 Identities=26% Similarity=0.405 Sum_probs=206.7
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+++.+|++++++++||||+++++++.+.. ..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 82 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PICL 82 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEEE
T ss_pred hhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----ceEE
Confidence 58999999999999999999998 577899999975433 3467899999999999999999999987654 5899
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccc
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSH 706 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~ 706 (854)
||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+.
T Consensus 83 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 154 (269)
T 4hcu_A 83 VFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTR 154 (269)
T ss_dssp EEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGG
T ss_pred EEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccc
Confidence 9999999999999976542 689999999999999999999999 9999999999999988876666 999998
Q ss_pred ccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 707 QLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 707 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
......... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ............
T Consensus 155 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~---- 226 (269)
T 4hcu_A 155 FVLDDQYTS--STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL---- 226 (269)
T ss_dssp GBCCHHHHS--TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC----
T ss_pred ccccccccc--ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCccC----
Confidence 765432211 122357889999999998899999999999999999999 99999753221 111111111000
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
..+ ..++..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 227 -~~~---------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 227 -YKP---------------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -CCC---------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCC---------------------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 000 01134578999999999999999999999999998764
No 68
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.6e-40 Score=358.73 Aligned_cols=264 Identities=19% Similarity=0.248 Sum_probs=208.4
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.+|.+.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++...+ ..+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-----~~~ 81 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-----YNA 81 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-----EEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-----ccE
Confidence 579999999999999999999988999999999875433 34688999999999 9999999999987755 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc-----c-cc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-----A-HQ 700 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~-~~ 700 (854)
+||||+ +++|.+++..... .+++.+++.|+.|++.||+|||+. +|+||||||+||+++.++. . ++
T Consensus 82 lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLCDR-----TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred EEEEeC-CCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 999999 8999999987532 789999999999999999999999 9999999999999998764 4 45
Q ss_pred ccccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh
Q 043388 701 NFSLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK 776 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~ 776 (854)
|||+++......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+...
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~ 230 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQ 230 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHH
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHH
Confidence 999998775543221 11234679999999999999999999999999999999999999998643221 111110
Q ss_pred hcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 777 MTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 777 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
....... ..........++ ++.+++..||+.||.+||++++|.+.|+++.++.
T Consensus 231 ~i~~~~~-------------------~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 231 KIGDTKR-------------------ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHHHHHH-------------------HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhhhc-------------------cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0000000 000000011124 7889999999999999999999999999887654
No 69
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=358.26 Aligned_cols=283 Identities=18% Similarity=0.240 Sum_probs=211.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|.+.++||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++..... ...+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT---RHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT---CCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCC---ceEE
Confidence 57999999999999999999999899999999997543 3345778899999999999999999999875442 2579
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe----cCCccccc-c
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHQ-N 701 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~~~-D 701 (854)
+||||+++|+|.+++...... ..+++.+++.++.|++.||+|||+. +|+||||||+||++ +.+...++ |
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCCHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 999999999999999875421 1489999999999999999999999 99999999999999 66665555 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccC--------CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc---h
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM--------GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGL---T 770 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~---~ 770 (854)
||+++........ ....||+.|+|||++. +..++.++|||||||++|||++|+.||........ .
T Consensus 160 fg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~ 235 (319)
T 4euu_A 160 FGAARELEDDEQF----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235 (319)
T ss_dssp CTTCEECCTTCCB----CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHH
T ss_pred CCCceecCCCCce----eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHH
Confidence 9999877654332 2246999999999875 56789999999999999999999999975432211 1
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhh
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTR 846 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 846 (854)
+........+..+........ ... ...... +............+.+++.+||+.||++|||++|+++...+..
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 236 MYKIITGKPSGAISGVQKAEN-GPI-DWSGDM-PVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHHHHCCTTCCEEEECSTT-CCE-EEESSC-CTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHhcCCCcccchhhhcccC-Ccc-ccCccC-CcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 222222222111111100000 000 000000 0001122445677899999999999999999999999877643
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-41 Score=358.80 Aligned_cols=252 Identities=19% Similarity=0.262 Sum_probs=203.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.++||||+++++++.+.+ ..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-----ELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-----EEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-----EEE
Confidence 368999999999999999999999999999999997543 33467889999999999999999999997755 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC--Ccccc-cccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH--DMVAH-QNFS 703 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~~-~Dfg 703 (854)
+||||+++|+|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++. ++..+ +|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSAF-----ELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 99999999999999976532 689999999999999999999999 9999999999999986 45555 4999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......
T Consensus 150 ~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~-- 222 (321)
T 1tki_A 150 QARQLKPGDN----FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYTF-- 222 (321)
T ss_dssp TCEECCTTCE----EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCC--
T ss_pred CCeECCCCCc----cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHcCCCCC--
Confidence 9987754322 12346899999999999988999999999999999999999999754221 1111111111000
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
+ ......++.++.+++.+||+.||.+|||+.|+++.
T Consensus 223 ----~------------------~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 223 ----D------------------EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----C------------------HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----C------------------hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0 00111225568899999999999999999999874
No 71
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.5e-41 Score=367.89 Aligned_cols=276 Identities=21% Similarity=0.319 Sum_probs=214.2
Q ss_pred cHHHHHHHHhhccccCccCCCcceEEEEeE-----ECCCceEEEEEEeecccc-cchHHHHHHHHHHHhc-cCCCeeeEE
Q 043388 539 SYAELSKATSEFASSNMIGQGSFGSVYKGI-----LGGEEMIVAVKVINLKQK-GAFRSFVAECEALRNI-RHRNLIKII 611 (854)
Q Consensus 539 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~ 611 (854)
.........++|.+.+.||+|+||.||+|+ ...+++.||||+++.... ...+.+.+|++++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 334444556899999999999999999998 455678999999975432 3346789999999999 899999999
Q ss_pred EEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcc-------------------------------------------
Q 043388 612 TICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHL------------------------------------------- 648 (854)
Q Consensus 612 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------- 648 (854)
++|.+.+. ..++||||+++|+|.+++.......
T Consensus 93 ~~~~~~~~----~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3vhe_A 93 GACTKPGG----PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168 (359)
T ss_dssp EEECSTTS----CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------
T ss_pred eeeecCCC----ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccc
Confidence 99876442 4799999999999999998754210
Q ss_pred -----------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccccccc
Q 043388 649 -----------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDS 710 (854)
Q Consensus 649 -----------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~ 710 (854)
....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++..++ |||++.....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 245 (359)
T 3vhe_A 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245 (359)
T ss_dssp ---------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred cccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence 011289999999999999999999999 9999999999999998877776 9999987654
Q ss_pred CCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccccccCc
Q 043388 711 ASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDP 789 (854)
Q Consensus 711 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 789 (854)
..... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||........ .............
T Consensus 246 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~~~~~~------ 317 (359)
T 3vhe_A 246 DPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTRMRA------ 317 (359)
T ss_dssp CTTCE-EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHTCCCCC------
T ss_pred cccch-hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcCCCCCC------
Confidence 33221 1223458899999999998899999999999999999998 9999976432221 1111111110000
Q ss_pred hhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 790 SLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
...++.++.+++..||+.||++|||+.|+++.|+++.+..
T Consensus 318 --------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 318 --------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp --------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 0112455788999999999999999999999999988653
No 72
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-40 Score=350.65 Aligned_cols=251 Identities=26% Similarity=0.433 Sum_probs=200.6
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc-------chHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG-------AFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 6899999999999999999999989999999998644322 1267899999999999999999999986533
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCceEecCCc--
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDM-- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~-- 696 (854)
++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ + |+||||||+||+++.++
T Consensus 97 -----~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~ 163 (287)
T 4f0f_A 97 -----RMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDEN 163 (287)
T ss_dssp -----EEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTT
T ss_pred -----eEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCC
Confidence 799999999999998876542 689999999999999999999999 8 99999999999998765
Q ss_pred ----ccccccccccccccCCCCCCcccccCCcccccCccccC--CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch
Q 043388 697 ----VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM--GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT 770 (854)
Q Consensus 697 ----~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~ 770 (854)
++++|||.++..... .....||+.|+|||++. ...++.++||||+||++|||++|+.||.........
T Consensus 164 ~~~~~kl~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~ 237 (287)
T 4f0f_A 164 APVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIK 237 (287)
T ss_dssp CSCCEEECCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHH
T ss_pred CceeEEeCCCCcccccccc------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHH
Confidence 344599999754432 22346999999999984 455789999999999999999999999764333222
Q ss_pred HhHHhhh-cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 771 LHEFVKM-TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 771 ~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
....... ...... ...++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 238 ~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 238 FINMIREEGLRPTI--------------------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHHHSCCCCCC--------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHHhccCCCCCC--------------------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 1221111 111100 112245688999999999999999999999999864
No 73
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-40 Score=348.75 Aligned_cols=258 Identities=26% Similarity=0.386 Sum_probs=206.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++.+++||||+++++++.... ..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY-----PIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----ceE
Confidence 468999999999999999999988 677899999975443 3467899999999999999999999986654 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHGK-----GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp EEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred EEEEccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 99999999999999987532 689999999999999999999999 9999999999999998887766 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
.......... .....+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ........ ..
T Consensus 152 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~-~~---- 223 (268)
T 3sxs_A 152 RYVLDDQYVS--SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE-VVLKVSQG-HR---- 223 (268)
T ss_dssp EECCTTCEEE--CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHTT-CC----
T ss_pred eecchhhhhc--ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH-HHHHHHcC-CC----
Confidence 8765543221 223457788999999988889999999999999999999 999997542211 01111100 00
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
...+ ..++..+.+++..||+.||++|||+.|+++.|+.+.++.
T Consensus 224 -~~~~---------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 224 -LYRP---------------------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp -CCCC---------------------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred -CCCC---------------------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 0000 011345788999999999999999999999999987653
No 74
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.2e-40 Score=372.50 Aligned_cols=381 Identities=18% Similarity=0.179 Sum_probs=288.6
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcc-cChhhhcCCCCCceeeec
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSG-MFPRWICNISSLEFIYLT 96 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~ 96 (854)
-+.++.+++.++ .+|. +. ++|++|+|++|.|++..|..|+.+++|++|+|++|.+.+ +.|.+|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 457888888888 6776 33 789999999999998888899999999999999998873 456788999999999999
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCc--cccCCCCCCEEecCCCcCcccCCcC-
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPD--SLSNASNLERLDLSGNQFKGKVSID- 173 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~--~~~~l~~L~~L~Ls~N~i~~~~~~~- 173 (854)
+|+++ .++...|.++++|++|++++|+++. .+|. .|.++++|++|+|++|+|+++.|..
T Consensus 88 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 149 (455)
T 3v47_A 88 YNQFL-QLETGAFNGLANLEVLTLTQCNLDG-----------------AVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149 (455)
T ss_dssp TCTTC-EECTTTTTTCTTCCEEECTTSCCBT-----------------HHHHSSTTTTCTTCCEEECCSSBCCSCCCCGG
T ss_pred CCccC-ccChhhccCcccCCEEeCCCCCCCc-----------------cccCcccccCcccCCEEECCCCccCccCcccc
Confidence 99988 5655667888888888877776643 1223 3778888888888888888887765
Q ss_pred ccccCCCCeEecccccccCCCCCChhhhhhccCC--CCCcEEEcccCcCcccCChhh--------hhhcccccEEEccCC
Q 043388 174 FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNC--SSLKALSLCDNQFGGELPHSI--------ANLSSTMIQFRIGGN 243 (854)
Q Consensus 174 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~~L~~L~l~~N 243 (854)
|..+++|++|+|++|.++...... +..+ .+|+.|++++|.+.+..+..+ ..++ .|+.|++++|
T Consensus 150 ~~~l~~L~~L~L~~n~l~~~~~~~------l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~-~L~~L~Ls~n 222 (455)
T 3v47_A 150 FLNMRRFHVLDLTFNKVKSICEED------LLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT-SITTLDLSGN 222 (455)
T ss_dssp GGGCTTCCEEECTTCCBSCCCTTT------SGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC-EEEEEECTTS
T ss_pred cCCCCcccEEeCCCCcccccChhh------hhccccccccccccccCcccccchhhccccccccccccc-eeeeEecCCC
Confidence 788888888888888887665442 2222 577888888888774433222 1222 5666666666
Q ss_pred cccccCCcccccc---ccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCc--cccchhccccceec
Q 043388 244 QISGTIPSGIRNL---VNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNL--TKLADLALSFNNLQ 318 (854)
Q Consensus 244 ~l~~~~~~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~ 318 (854)
.+++..|..+..+ ++|+.|++++|.+.+.. +..+.+....+..+..+ ++|+.|++++|.++
T Consensus 223 ~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 288 (455)
T 3v47_A 223 GFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIF 288 (455)
T ss_dssp CCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCC
T ss_pred cccccchhhhhccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCcccc
Confidence 6666666555444 56666666666654321 11122222233334433 68999999999999
Q ss_pred ccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccc
Q 043388 319 GNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFH 398 (854)
Q Consensus 319 ~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~ 398 (854)
+..|..|..+++|+.|++++|++++..|.. ++. +.+|++|+|++|.++
T Consensus 289 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~-------------------------~~~-------l~~L~~L~Ls~N~l~ 336 (455)
T 3v47_A 289 ALLKSVFSHFTDLEQLTLAQNEINKIDDNA-------------------------FWG-------LTHLLKLNLSQNFLG 336 (455)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCEECTTT-------------------------TTT-------CTTCCEEECCSSCCC
T ss_pred ccchhhcccCCCCCEEECCCCcccccChhH-------------------------hcC-------cccCCEEECCCCccC
Confidence 999999999999999999999998543332 333 456999999999999
Q ss_pred cCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCCC-ccccCcccccccccccccCCc
Q 043388 399 GVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTK-GVFSNKTKISLQVNVKLCGGI 473 (854)
Q Consensus 399 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~~c~~~ 473 (854)
+..|..|+.+++|++|+|++|++++..|..|..+++|++|+|++|++++..+.. ..+.+...+.+.+|+..|.++
T Consensus 337 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 337 SIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp EECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 988999999999999999999999988999999999999999999999866543 456778888999999988765
No 75
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-40 Score=362.20 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=202.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-----ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-----KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 621 (854)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--- 99 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG--- 99 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 468999999999999999999999899999999996421 224578899999999999999999999997755
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----c
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----V 697 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~ 697 (854)
..++||||+++|+|.+++...... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++ +
T Consensus 100 --~~~lv~e~~~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 100 --MLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp --EEEEEEECCSSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred --EEEEEEeCCCCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 789999999999999888754311 12589999999999999999999999 999999999999998654 4
Q ss_pred cccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhh
Q 043388 698 AHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKM 777 (854)
Q Consensus 698 ~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 777 (854)
+++|||++......... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........
T Consensus 173 kl~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~ 247 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLV---AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKG 247 (351)
T ss_dssp EECCCTTCEECCTTSCB---CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHT
T ss_pred EEecCcceeEecCCCee---ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcC
Confidence 45599999887654322 1234699999999999998999999999999999999999999975321 111111111
Q ss_pred cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 778 TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 778 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
... .++ .....++..+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~------~~~------------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 248 KYK------MNP------------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCC------CCH------------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCC------CCc------------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 000 001122456889999999999999999999986
No 76
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=366.50 Aligned_cols=254 Identities=18% Similarity=0.260 Sum_probs=202.5
Q ss_pred HHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 545 KATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 545 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
...++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~---- 83 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG---- 83 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS----
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC----
Confidence 34678999999999999999999999999999999997543 223467889999999999999999999997655
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---Ccccc
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAH 699 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~~ 699 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++. ++..+
T Consensus 84 -~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 84 -HHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp -EEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred -EEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 7899999999999999998764 689999999999999999999999 9999999999999984 34444
Q ss_pred -cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 700 -QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 700 -~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
+|||++......... .....||+.|+|||++.+..++.++||||+||++|+|++|++||...... ..........
T Consensus 154 L~DFG~a~~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~ 229 (444)
T 3soa_A 154 LADFGLAIEVEGEQQA---WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH-RLYQQIKAGA 229 (444)
T ss_dssp ECCCSSCBCCCTTCCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTC
T ss_pred EccCceeEEecCCCce---eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhCC
Confidence 599999877654322 22357999999999999989999999999999999999999999753211 1111111111
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. ...+. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~-----~~~~~-------------------~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 230 YD-----FPSPE-------------------WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CC-----CCTTT-------------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CC-----CCccc-------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 10 00000 0112455789999999999999999999986
No 77
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.1e-40 Score=354.04 Aligned_cols=274 Identities=23% Similarity=0.328 Sum_probs=201.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.++||+|+||+||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.. .
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-----C 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-----C
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-----E
Confidence 468999999999999999999997 58899999996442 233467889999999999999999999987654 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++ +|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 94 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 94 LTLVFEFMEK-DLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp EEEEEECCSE-EHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCCC-CHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 8999999985 88888876542 689999999999999999999999 9999999999999998877776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhh---cC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKM---TL 779 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~---~~ 779 (854)
+++......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....+... ..
T Consensus 165 ~a~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~ 240 (311)
T 3niz_A 165 LARAFGIPVRSY---THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPN 240 (311)
T ss_dssp TCEETTSCCC------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCC
T ss_pred CceecCCCcccc---cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCC
Confidence 998775433222 22468999999999876 568999999999999999999999998654332 22222221 11
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+..+....+......... ..............+..++.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 241 PREWPQVQELPLWKQRTF-QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTTSGGGTTSHHHHSCCC-CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hHHhhhhhccchhhhccc-ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111111111000000000 000000001111223456789999999999999999999986
No 78
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=359.39 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=201.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~----- 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE----- 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 46899999999999999999999999999999999643 2345578899999999999999999999998765
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 7899999999999999998754 689999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG---SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
|+++....... ....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+......
T Consensus 160 G~a~~~~~~~~----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~ 233 (384)
T 4fr4_A 160 NIAAMLPRETQ----ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFE 233 (384)
T ss_dssp TTCEECCTTCC----BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHH
T ss_pred ceeeeccCCCc----eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHh
Confidence 99987654322 223579999999999874 458999999999999999999999997543221 111111100
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCC-HHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERME-MRDVVA 840 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~ 840 (854)
... ......++..+.+++.+||+.||.+||+ ++++.+
T Consensus 234 ~~~------------------------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 234 TTV------------------------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HCC------------------------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred hcc------------------------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 000 0000112456789999999999999998 666653
No 79
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.8e-41 Score=365.34 Aligned_cols=266 Identities=21% Similarity=0.346 Sum_probs=206.9
Q ss_pred HhhccccCccCCCcceEEEEeEEC-----CCceEEEEEEeecc-cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILG-----GEEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|.+.+.||+|+||.||+|++. .+++.||||+++.. .......+.+|+.++++++||||+++++++....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 367999999999999999999953 46788999999643 2334457889999999999999999999987654
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCc-ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc---
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDH-LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 696 (854)
..++||||+++|+|.+++...... .....+++.+++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 148 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 221 (367)
T 3l9p_A 148 ---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 221 (367)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred ---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCc
Confidence 579999999999999999875421 1223689999999999999999999999 999999999999998544
Q ss_pred -ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHH
Q 043388 697 -VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEF 774 (854)
Q Consensus 697 -~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~ 774 (854)
++++|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+.
T Consensus 222 ~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~ 298 (367)
T 3l9p_A 222 VAKIGDFGMARDIYRAGYYR-KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEF 298 (367)
T ss_dssp CEEECCCHHHHHHHHHSSCT-TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH
T ss_pred eEEECCCccccccccccccc-cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence 3445999998664432221 1122458999999999988899999999999999999998 99999754221 11111
Q ss_pred hhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 775 VKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 775 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
+....... ....++..+.+++.+||+.||++|||+.||++.|+.+.+..
T Consensus 299 i~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 299 VTSGGRMD--------------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHTTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHcCCCCC--------------------------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11100000 01122456789999999999999999999999999887643
No 80
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.1e-40 Score=359.77 Aligned_cols=253 Identities=20% Similarity=0.302 Sum_probs=203.3
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
..++|.+.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----- 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----- 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 45789999999999999999999998999999999975432 33467889999999999999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----ccc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAH 699 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~~ 699 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.+. +++
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 7899999999999999998654 689999999999999999999999 999999999999998643 444
Q ss_pred cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 700 QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
+|||++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 173 ~DfG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~ 247 (362)
T 2bdw_A 173 ADFGLAIEVNDSEAW----HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAY 247 (362)
T ss_dssp CCCTTCBCCTTCCSC----CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC
T ss_pred eecCcceEecCCccc----ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCC
Confidence 599999877643221 2356999999999999989999999999999999999999999753211 11111111110
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ...+ ....++..+.+++.+||+.||++|||+.|+++.
T Consensus 248 ~-----~~~~-------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 D-----YPSP-------------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp C-----CCTT-------------------GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred C-----CCcc-------------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000 001124567899999999999999999998764
No 81
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-40 Score=357.82 Aligned_cols=247 Identities=27% Similarity=0.382 Sum_probs=200.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++....
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT----- 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 46899999999999999999999889999999999643 2333467899999999999999999999998765
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+ +|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 83 ~~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 DIVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp EEEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred EEEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 689999999 679999987754 689999999999999999999999 9999999999999999877666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|++......... ...+||+.|+|||++.+..+ ++++||||+||++|||++|+.||........ ... ...
T Consensus 153 G~s~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----~~~-i~~ 222 (336)
T 3h4j_B 153 GLSNIMTDGNFL----KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----FKK-VNS 222 (336)
T ss_dssp SCTBTTTTSBTT----CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----BCC-CCS
T ss_pred ccceeccCCccc----ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----HHH-HHc
Confidence 999876544322 23469999999999988775 7899999999999999999999975422210 000 000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.... .| ..++..+.+++.+||+.||.+|||++|+++.
T Consensus 223 ~~~~--~p---------------------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 223 CVYV--MP---------------------DFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SCCC--CC---------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCC--Cc---------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 0000 00 0114457789999999999999999999763
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.4e-40 Score=350.96 Aligned_cols=264 Identities=15% Similarity=0.186 Sum_probs=210.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|.+.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.+++++ +|+|++++++++.... ..+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-----~~~ 82 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-----HNV 82 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-----EEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-----eeE
Confidence 579999999999999999999988999999999864432 35678999999999 8999999999987655 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc-----cc-c
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-----AH-Q 700 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~~-~ 700 (854)
+||||+ +++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++. .+ +
T Consensus 83 lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred EEEEec-CCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 999999 9999999987542 689999999999999999999999 9999999999999987653 44 5
Q ss_pred ccccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch--HhHH
Q 043388 701 NFSLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT--LHEF 774 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~--~~~~ 774 (854)
|||+++......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 233 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH
Confidence 999998876543321 1223457999999999999999999999999999999999999999864322110 0000
Q ss_pred hhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 775 VKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 775 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
..... ..........++..+.+++.+||+.||++|||+++|++.|+++.++..
T Consensus 234 ~~~~~-----------------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 234 GEKKQ-----------------------STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHHHH-----------------------HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred Hhhcc-----------------------CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 00000 000001111335678999999999999999999999999999987653
No 83
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.9e-40 Score=361.58 Aligned_cols=275 Identities=16% Similarity=0.258 Sum_probs=205.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCC-----ceEEEEEEeecccccc-----------hHHHHHHHHHHHhccCCCeeeE
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGE-----EMIVAVKVINLKQKGA-----------FRSFVAECEALRNIRHRNLIKI 610 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~ 610 (854)
.++|.+.+.||+|+||.||+|.+..+ ++.||||++....... ...+.+|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 45899999999999999999999754 5789999986543211 1223445556677789999999
Q ss_pred EEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCce
Q 043388 611 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNV 690 (854)
Q Consensus 611 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 690 (854)
++++.... .+..+.++||||+ +++|.+++..... .+++.+++.|+.||+.||+|||+. +|+||||||+||
T Consensus 114 ~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEANAK-----RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred Eeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHE
Confidence 99987653 2233689999999 9999999987532 689999999999999999999999 999999999999
Q ss_pred Eec--CCccccc-ccccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 043388 691 LLD--HDMVAHQ-NFSLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDA 763 (854)
Q Consensus 691 ll~--~~~~~~~-Dfg~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~ 763 (854)
|++ .++..++ |||+++.+....... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 998 6666655 999998775543221 112335699999999999999999999999999999999999999985
Q ss_pred cccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHH
Q 043388 764 AFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLC 843 (854)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 843 (854)
..... ...............+..++.+ ....++.++.+++..||+.||++||++.++++.|+
T Consensus 264 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 264 NLKDP-KYVRDSKIRYRENIASLMDKCF-----------------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp GTTCH-HHHHHHHHHHHHCHHHHHHHHS-----------------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cccCH-HHHHHHHHHhhhhHHHHHHHhc-----------------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 32221 1111111111000000000000 00122667899999999999999999999999999
Q ss_pred hhhhhh
Q 043388 844 HTRETF 849 (854)
Q Consensus 844 ~~~~~~ 849 (854)
++.+..
T Consensus 326 ~~~~~~ 331 (364)
T 3op5_A 326 QGLKAI 331 (364)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 988764
No 84
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=6.6e-41 Score=362.97 Aligned_cols=249 Identities=23% Similarity=0.296 Sum_probs=198.3
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 621 (854)
..++|++.++||+|+||.||+|++..+++.||||+++.. .....+.+.+|..+++.+ +||||+++++++.+.+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~--- 97 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD--- 97 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS---
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC---
Confidence 357899999999999999999999999999999999743 234456788999999988 7999999999997765
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++..++
T Consensus 98 --~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 98 --RLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 7899999999999999998765 689999999999999999999999 9999999999999999887776
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............
T Consensus 167 DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~~ 242 (353)
T 3txo_A 167 DFGMCKEGICNGV---TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAILNDEVV 242 (353)
T ss_dssp CCTTCBCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC
T ss_pred cccceeecccCCc---cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCC
Confidence 9999986433222 122357999999999999888999999999999999999999999754221 111111111000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH------HHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM------RDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~ 840 (854)
. | ..+...+.+++.+||+.||++||++ .|+++
T Consensus 243 --~-----p---------------------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 --Y-----P---------------------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --C-----C---------------------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --C-----C---------------------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0 0 0113457789999999999999998 66654
No 85
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.2e-40 Score=359.76 Aligned_cols=248 Identities=22% Similarity=0.296 Sum_probs=197.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.++||+|+||.||+|++..+++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+.+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 568999999999999999999999999999999997542 23345688999999887 8999999999997755
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++..++ |
T Consensus 127 -~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 127 -RLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred -EEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 7899999999999999998764 789999999999999999999999 9999999999999999887776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc----hHhHHhhh
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGL----TLHEFVKM 777 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~----~~~~~~~~ 777 (854)
||+++....... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ........
T Consensus 197 FGla~~~~~~~~---~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 273 (396)
T 4dc2_A 197 YGMCKEGLRPGD---TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 273 (396)
T ss_dssp CTTCBCCCCTTC---CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH
T ss_pred cceeeecccCCC---ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH
Confidence 999986433222 12335799999999999999999999999999999999999999974321110 00000000
Q ss_pred cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH
Q 043388 778 TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM 835 (854)
Q Consensus 778 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 835 (854)
..... ...+..+...+.+++.+||+.||.+||++
T Consensus 274 i~~~~------------------------~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 274 ILEKQ------------------------IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHCC------------------------CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred Hhccc------------------------cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 00000 00001124557899999999999999996
No 86
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-40 Score=357.95 Aligned_cols=259 Identities=22% Similarity=0.373 Sum_probs=200.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceE----EEEEEeecc-cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMI----VAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 621 (854)
.++|++.++||+|+||.||+|++..+++. ||+|.++.. .....+.+.+|+.++++++||||++++++|....
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST--- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS---
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC---
Confidence 36799999999999999999998766654 577777533 2344578999999999999999999999997643
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
.++||||+++|+|.+++..... .+++..++.|+.|++.||+|||++ +|+||||||+||+++.++..++
T Consensus 91 ---~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~ 159 (327)
T 3poz_A 91 ---VQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp ---EEEEEECCTTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEEC
T ss_pred ---eEEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEc
Confidence 6899999999999999987543 689999999999999999999999 9999999999999999887776
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
|||+++......... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||...... ..........
T Consensus 160 Dfg~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~ 236 (327)
T 3poz_A 160 DFGLAKLLGAEEKEY-HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE 236 (327)
T ss_dssp CTTHHHHHTTTCC--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTC
T ss_pred cCcceeEccCCcccc-cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCC
Confidence 999998876543322 1223457889999999999999999999999999999999 99999754322 1222221111
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
... ....++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 237 ~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 237 RLP--------------------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCC--------------------------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCC--------------------------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 000 0011244578899999999999999999999999887653
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=351.33 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=194.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--------------------------cchHHHHHHHHHHH
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--------------------------GAFRSFVAECEALR 600 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 600 (854)
.++|.+.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3689999999999999999999998999999999964421 12356889999999
Q ss_pred hccCCCeeeEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 043388 601 NIRHRNLIKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPI 680 (854)
Q Consensus 601 ~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~i 680 (854)
+++||||+++++++.+.. ....++||||+++++|.+++... .+++.++..++.|++.||+|||+. +|
T Consensus 92 ~l~h~~iv~~~~~~~~~~---~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPN---EDHLYMVFELVNQGPVMEVPTLK-------PLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECSS---SSEEEEEEECCTTCBSCCSSCSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcCC---CCEEEEEEecCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 999999999999987633 23689999999999998865432 689999999999999999999999 99
Q ss_pred EeecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCC---CCccchhHHHHHHHHHHHh
Q 043388 681 VHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSE---ASMTGDVYSFGILLLEMFT 756 (854)
Q Consensus 681 vH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~slGvvl~ellt 756 (854)
+||||||+||+++.++..++ |||++......... .....||+.|+|||++.+.. ++.++|||||||++|||++
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~ 235 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL---LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF 235 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCE---ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCcccccccccc---ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHH
Confidence 99999999999998877776 99999877544322 12346999999999988765 4788999999999999999
Q ss_pred CCCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHH
Q 043388 757 GRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMR 836 (854)
Q Consensus 757 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 836 (854)
|+.||...... ........... ...+ ...++..+.+++.+||+.||++|||+.
T Consensus 236 g~~pf~~~~~~--~~~~~~~~~~~----~~~~---------------------~~~~~~~l~~li~~~l~~dp~~R~s~~ 288 (298)
T 2zv2_A 236 GQCPFMDERIM--CLHSKIKSQAL----EFPD---------------------QPDIAEDLKDLITRMLDKNPESRIVVP 288 (298)
T ss_dssp SSCSSCCSSHH--HHHHHHHHCCC----CCCS---------------------SSCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred CCCCCCCccHH--HHHHHHhcccC----CCCC---------------------ccccCHHHHHHHHHHhhcChhhCCCHH
Confidence 99999753211 11111110000 0000 011245578999999999999999999
Q ss_pred HHHH
Q 043388 837 DVVA 840 (854)
Q Consensus 837 evl~ 840 (854)
|+++
T Consensus 289 e~l~ 292 (298)
T 2zv2_A 289 EIKL 292 (298)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9875
No 88
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.9e-40 Score=356.39 Aligned_cols=259 Identities=22% Similarity=0.313 Sum_probs=201.4
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-----
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDS----- 619 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 619 (854)
..++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||++++++|.+...
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4678999999999999999999999899999999997543 3345789999999999999999999999865432
Q ss_pred -----------------------------------------------CCCceeeEEEeeccCCCHHHHhhhcCCcccccc
Q 043388 620 -----------------------------------------------KGADFKALVFEYMENGSLEDWLHQSNDHLEVCK 652 (854)
Q Consensus 620 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~ 652 (854)
....+.++||||+++|+|.+++...... ..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~ 160 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---ED 160 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GG
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cc
Confidence 1122479999999999999999876532 25
Q ss_pred cCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccccccccCCCCC---------CcccccC
Q 043388 653 LTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTP---------SSSIGIK 722 (854)
Q Consensus 653 ~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~---------~~~~~~~ 722 (854)
.++..++.++.||+.||+|||++ +|+||||||+||+++.++..++ |||+++......... .......
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccC
Confidence 67778999999999999999999 9999999999999998877776 999998876543211 1223356
Q ss_pred CcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchh
Q 043388 723 GTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMI 802 (854)
Q Consensus 723 gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 802 (854)
||+.|+|||++.+..++.++|||||||++|||++|..|+... ..........
T Consensus 238 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~~~--------------------- 289 (332)
T 3qd2_B 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVRNL--------------------- 289 (332)
T ss_dssp -CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHHTT---------------------
T ss_pred CCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhhcc---------------------
Confidence 999999999999999999999999999999999987774311 0000000000
Q ss_pred hHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 803 QEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 803 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
............+.+++.+||+.||++|||+.|+++
T Consensus 290 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 290 --KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp --CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred --CCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 001112233455788999999999999999999986
No 89
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6e-40 Score=380.88 Aligned_cols=401 Identities=18% Similarity=0.214 Sum_probs=302.1
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
+|++++ +|..+. ++|++|+|++|.|++..|.+|+.+++|++|+|++|+|++..|+.|+.+++|++|+|++|+|++ +
T Consensus 40 ~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l 115 (562)
T 3a79_B 40 NRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-I 115 (562)
T ss_dssp TSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-E
T ss_pred CCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-c
Confidence 467774 887765 799999999999998777899999999999999999999889999999999999999999995 5
Q ss_pred hhhhcCCCCCceeeecccccccccCc-ccccCCCCCcEEEcccCCCC--------CC--ceeeccCccCCCCCCCCCCcc
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPF-DILVNLPNLKELYLTFCSLK--------NL--WWLNLEQNNLGMGTASSIPDS 149 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~l~~n~l~--------~L--~~L~L~~N~l~~~~~~~~p~~ 149 (854)
|.. .+++|++|+|++|+|+ .+|. ..|.++++|++|++++|+++ +| +.|+|++|.+.. .+..|..
T Consensus 116 p~~--~l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~--~~~~~~~ 190 (562)
T 3a79_B 116 SCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHI--KGGETES 190 (562)
T ss_dssp CSC--CCTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCC--CSSSCCE
T ss_pred Ccc--ccccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccc--cccCccc
Confidence 555 8999999999999998 6663 68999999999999998764 45 888999988711 1233444
Q ss_pred ccCCC--CCCEEecCCCcCcccCC-cCccccCCCCeEecccc----------------------------cccCCCCCCh
Q 043388 150 LSNAS--NLERLDLSGNQFKGKVS-IDFSSLKNLWWLNLEQN----------------------------NLGMGTANDL 198 (854)
Q Consensus 150 ~~~l~--~L~~L~Ls~N~i~~~~~-~~f~~l~~L~~L~L~~N----------------------------~l~~~~~~~~ 198 (854)
|..+. .| .+++++|.+.+..+ ..+..+++|+.|++++| .+.... +
T Consensus 191 l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~---~ 266 (562)
T 3a79_B 191 LQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKC---S 266 (562)
T ss_dssp EEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHH---H
T ss_pred ccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHH---H
Confidence 54433 11 23444444433222 12333344444444443 221100 0
Q ss_pred hhhhhccCCCCCcEEEcccCcCcccCChhhh----------------------------hh--cccccEEEccCCccccc
Q 043388 199 DFVTLLTNCSSLKALSLCDNQFGGELPHSIA----------------------------NL--SSTMIQFRIGGNQISGT 248 (854)
Q Consensus 199 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~----------------------------~l--~~~L~~L~l~~N~l~~~ 248 (854)
.........++|++|++++|.++|.+|..++ .+ ...++.|++++|.+...
T Consensus 267 ~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~ 346 (562)
T 3a79_B 267 VKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHM 346 (562)
T ss_dssp HHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCC
T ss_pred HHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccc
Confidence 0000111234677777777777766665541 11 02488888888887632
Q ss_pred CCccccccccCCeeeccccccccCCCCCccCcccCceeeCcccccccc--CCccccCccccchhccccceecccCC-CCC
Q 043388 249 IPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGS--IPPSLGNLTKLADLALSFNNLQGNIP-SSL 325 (854)
Q Consensus 249 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~ 325 (854)
. ....+++|++|++++|++++..|..|.++++|++|+|++|++++. +|..|.++++|+.|++++|++++.+| ..+
T Consensus 347 ~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 424 (562)
T 3a79_B 347 V--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTC 424 (562)
T ss_dssp C--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCC
T ss_pred c--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhh
Confidence 2 127889999999999999999999999999999999999999963 35679999999999999999998455 468
Q ss_pred cCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCccc
Q 043388 326 GNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSL 405 (854)
Q Consensus 326 ~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~ 405 (854)
..+++|+.|++++|++++.+|..+. ..+. .+++++|.++ .+|..+.. +++|++|+|++|+|+...+..|
T Consensus 425 ~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~-~L~L~~N~l~-~ip~~~~~-------l~~L~~L~L~~N~l~~l~~~~~ 493 (562)
T 3a79_B 425 AWAESILVLNLSSNMLTGSVFRCLP--PKVK-VLDLHNNRIM-SIPKDVTH-------LQALQELNVASNQLKSVPDGVF 493 (562)
T ss_dssp CCCTTCCEEECCSSCCCGGGGSSCC--TTCS-EEECCSSCCC-CCCTTTTS-------SCCCSEEECCSSCCCCCCTTST
T ss_pred cCcccCCEEECCCCCCCcchhhhhc--CcCC-EEECCCCcCc-ccChhhcC-------CCCCCEEECCCCCCCCCCHHHH
Confidence 8999999999999999987777654 2333 3899999998 56666655 5679999999999995544459
Q ss_pred ccCCCCCEEEccCcccccccch
Q 043388 406 GFMKSIKELNVSSNNLSGQIPE 427 (854)
Q Consensus 406 ~~l~~L~~L~Ls~N~l~~~~p~ 427 (854)
..+++|+.|+|++|.+++..|-
T Consensus 494 ~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 494 DRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TTCTTCCCEECCSCCBCCCHHH
T ss_pred hcCCCCCEEEecCCCcCCCcch
Confidence 9999999999999999986663
No 90
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.5e-41 Score=360.55 Aligned_cols=263 Identities=20% Similarity=0.363 Sum_probs=196.7
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++...... ...
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~-~~~ 90 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA-GPL 90 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT-EEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC-Ccc
Confidence 679999999999999999999988999999999975432 2345788999999999999999999998765422 224
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++..++ |||
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred cEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 599999999999999998654 689999999999999999999999 9999999999999998877766 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
++.................||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~--- 237 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY-QHVREDPI--- 237 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHCCCC---
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCCCC---
Confidence 99877654433333334569999999999999999999999999999999999999997542211111 11110000
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHH-HHHHhh
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVV-AKLCHT 845 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl-~~L~~~ 845 (854)
.+ ......++..+.+++.+||+.||++||++.+++ ..+.+.
T Consensus 238 ----~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 238 ----PP-----------------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ----CH-----------------HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ----Cc-----------------ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 00 000112355688999999999999999766655 444443
No 91
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-40 Score=351.55 Aligned_cols=245 Identities=24% Similarity=0.306 Sum_probs=202.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|++.+.||+|+||.||+|+...+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----- 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS-----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC-----
Confidence 46899999999999999999999989999999999743 2334567889999999999999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++..++ ||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 7899999999999999998754 688999999999999999999999 9999999999999998887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|+++...... ...+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............
T Consensus 151 g~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~-- 221 (318)
T 1fot_A 151 GFAKYVPDVT------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEKILNAELR-- 221 (318)
T ss_dssp SSCEECSSCB------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHCCCC--
T ss_pred CcceecCCcc------ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC--
Confidence 9998765432 2356999999999999999999999999999999999999999753211 111111111000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----CHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-----EMRDVVA 840 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 840 (854)
. | ..+...+.+++.+|++.||++|| +++|+++
T Consensus 222 ~-----p---------------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 222 F-----P---------------------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp C-----C---------------------TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred C-----C---------------------CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 0 0 01134577899999999999999 8888874
No 92
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=350.17 Aligned_cols=258 Identities=27% Similarity=0.399 Sum_probs=198.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------~~~ 75 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN-------PVC 75 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT-------TTE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-------CcE
Confidence 357999999999999999999986 678999998643 345788999999999999999999998753 358
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc--ccccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--AHQNFSL 704 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~~~Dfg~ 704 (854)
+||||+++|+|.+++..... ...+++.+++.++.|+++||+|||+....+|+||||||+||+++.++. +++|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~ 152 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred EEEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccc
Confidence 99999999999999986542 125788999999999999999999932229999999999999987764 4459999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+........ ...||+.|+|||++.+..++.++|||||||++|||++|+.||.....................
T Consensus 153 ~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 224 (307)
T 2eva_A 153 ACDIQTHMT------NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-- 224 (307)
T ss_dssp ------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCC--
T ss_pred ccccccccc------cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCC--
Confidence 976643322 235899999999999999999999999999999999999999754222111111111100000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
....++..+.+++.+||+.||++|||++|+++.|+.+.+.+.
T Consensus 225 ------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 225 ------------------------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ------------------------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ------------------------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 011124557899999999999999999999999999887654
No 93
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.7e-39 Score=366.14 Aligned_cols=356 Identities=26% Similarity=0.357 Sum_probs=296.5
Q ss_pred cccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChh
Q 043388 3 KLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPR 82 (854)
Q Consensus 3 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 82 (854)
++.+.++. ..+++|++|++++|.++ .+|. +..+++|++|+|++|.+++..+ |..+++|++|+|++|++++..|
T Consensus 35 ~~~~~i~~--~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 107 (466)
T 1o6v_A 35 NVTDTVSQ--TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP- 107 (466)
T ss_dssp STTSEECH--HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-
T ss_pred ccccccCh--hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh-
Confidence 33444443 45678999999999998 4664 8889999999999999996544 9999999999999999997655
Q ss_pred hhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecC
Q 043388 83 WICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLS 162 (854)
Q Consensus 83 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls 162 (854)
|.++++|++|+|++|+++ .++. |.++++|++|++++|.+..+ | .+.++++|++|+++
T Consensus 108 -~~~l~~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~------------------~-~~~~l~~L~~L~l~ 164 (466)
T 1o6v_A 108 -LANLTNLTGLTLFNNQIT-DIDP--LKNLTNLNRLELSSNTISDI------------------S-ALSGLTSLQQLSFG 164 (466)
T ss_dssp -GTTCTTCCEEECCSSCCC-CCGG--GTTCTTCSEEEEEEEEECCC------------------G-GGTTCTTCSEEEEE
T ss_pred -hcCCCCCCEEECCCCCCC-CChH--HcCCCCCCEEECCCCccCCC------------------h-hhccCCcccEeecC
Confidence 999999999999999998 6654 78888888888887776533 3 47889999999997
Q ss_pred CCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccC
Q 043388 163 GNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGG 242 (854)
Q Consensus 163 ~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~ 242 (854)
|.+.+..+ |..+++|++|++++|.++.++ .+..+++|++|++++|.+++..| +..++ .|+.|++++
T Consensus 165 -~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~--------~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~ 230 (466)
T 1o6v_A 165 -NQVTDLKP--LANLTTLERLDISSNKVSDIS--------VLAKLTNLESLIATNNQISDITP--LGILT-NLDELSLNG 230 (466)
T ss_dssp -ESCCCCGG--GTTCTTCCEEECCSSCCCCCG--------GGGGCTTCSEEECCSSCCCCCGG--GGGCT-TCCEEECCS
T ss_pred -CcccCchh--hccCCCCCEEECcCCcCCCCh--------hhccCCCCCEEEecCCccccccc--ccccC-CCCEEECCC
Confidence 56665543 889999999999999987542 36788999999999999986555 55554 799999999
Q ss_pred CcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCC
Q 043388 243 NQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIP 322 (854)
Q Consensus 243 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 322 (854)
|.+++. +.+..+++|+.|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+
T Consensus 231 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 304 (466)
T 1o6v_A 231 NQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304 (466)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG
T ss_pred CCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh
Confidence 999854 468899999999999999987655 8899999999999999996544 8889999999999999986544
Q ss_pred CCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCC
Q 043388 323 SSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIP 402 (854)
Q Consensus 323 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p 402 (854)
+..+++|+.|++++|++++..| ++. +++|++|++++|++++.
T Consensus 305 --~~~l~~L~~L~L~~n~l~~~~~---------------------------~~~-------l~~L~~L~l~~n~l~~~-- 346 (466)
T 1o6v_A 305 --ISNLKNLTYLTLYFNNISDISP---------------------------VSS-------LTKLQRLFFYNNKVSDV-- 346 (466)
T ss_dssp --GGGCTTCSEEECCSSCCSCCGG---------------------------GGG-------CTTCCEEECCSSCCCCC--
T ss_pred --hcCCCCCCEEECcCCcCCCchh---------------------------hcc-------CccCCEeECCCCccCCc--
Confidence 7889999999999999885433 111 45799999999999975
Q ss_pred cccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCccc
Q 043388 403 FSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGE 448 (854)
Q Consensus 403 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 448 (854)
..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 347 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 347 SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 478999999999999999998877 89999999999999999984
No 94
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.1e-40 Score=355.33 Aligned_cols=281 Identities=21% Similarity=0.311 Sum_probs=191.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN-----KL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-----EE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-----eE
Confidence 468999999999999999999999899999999997543 334567889999999999999999999987654 78
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||++ |+|.+++...........+++..+..++.||+.||+|||+. +|+||||||+||+++.++..++ |||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999998 59999997654322223689999999999999999999999 9999999999999998877776 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc--CCc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT--LPE 781 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~~~ 781 (854)
++......... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....+.... ...
T Consensus 155 ~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 230 (317)
T 2pmi_A 155 ARAFGIPVNTF---SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNE 230 (317)
T ss_dssp CEETTSCCCCC---CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCT
T ss_pred ceecCCCcccC---CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCh
Confidence 98775433221 224689999999998764 58999999999999999999999998643221 111111110 011
Q ss_pred ccccccC--chhhHHHhhc--cchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVD--PSLLMEVMAN--NSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..+.... +......... ....+.........+...+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 231 SLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp TTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0000000 0000000000 000000000001122456889999999999999999999976
No 95
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=7.6e-41 Score=371.34 Aligned_cols=263 Identities=20% Similarity=0.230 Sum_probs=205.5
Q ss_pred HHHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeec
Q 043388 540 YAELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSS 616 (854)
Q Consensus 540 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 616 (854)
+.++....++|.+.++||+|+||+||+|++..+++.||+|+++.. .......+.+|..++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344445568999999999999999999999989999999999642 22233458899999999999999999999987
Q ss_pred cCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc
Q 043388 617 IDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 696 (854)
Q Consensus 617 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 696 (854)
.+ ..|+||||+++|+|.+++..... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 146 ~~-----~~~lV~Ey~~gg~L~~~l~~~~~-----~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 146 DN-----NLYLVMDYYVGGDLLTLLSKFED-----RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp SS-----EEEEEECCCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred CC-----EEEEEEecCCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 65 78999999999999999987432 689999999999999999999999 999999999999999988
Q ss_pred cccc-ccccccccccCCCCCCcccccCCcccccCccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch
Q 043388 697 VAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM-----GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT 770 (854)
Q Consensus 697 ~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~ 770 (854)
..++ |||+++........ .....+||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..
T Consensus 213 ~vkL~DFGla~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~ 289 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTV--QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ET 289 (437)
T ss_dssp CEEECCCTTCEECCTTSCE--ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HH
T ss_pred CEEEcchhhhhhcccCCCc--ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HH
Confidence 7777 99999876543322 122357999999999986 566899999999999999999999999754221 11
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCC--CCCHHHHHHH
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFE--RMEMRDVVAK 841 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 841 (854)
...+........... ....++..+.+++.+|+..+|++ ||+++|+++.
T Consensus 290 ~~~i~~~~~~~~~p~-----------------------~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 290 YGKIMNHKERFQFPT-----------------------QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHHHTHHHHCCCCS-----------------------SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred HHhhhhccccccCCc-----------------------ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111111000000000 00012445778999999888888 9999998763
No 96
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2e-40 Score=353.45 Aligned_cols=275 Identities=23% Similarity=0.362 Sum_probs=207.3
Q ss_pred hhccccCccCCCcceEEEEeE----ECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGI----LGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
+.|++.+.||+|+||.||+|+ ...+++.||+|+++... ....+.+.+|++++++++||||+++++++...+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG--- 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC---
Confidence 568999999999999999999 45678999999997443 3445788999999999999999999999876532
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
...++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ceEEEEEEeCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 257999999999999999966542 689999999999999999999999 9999999999999988876666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+.................||..|+|||++.+..++.++||||+||++|||++|+.|+.... ..+.....+.
T Consensus 170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~ 243 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPT 243 (302)
T ss_dssp CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSC
T ss_pred ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCc
Confidence 9999887665433223334568899999999998889999999999999999999999865321 1111110000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhh
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTR 846 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 846 (854)
.. ............. ..+......++..+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus 244 ~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 244 HG-QMTVTRLVNTLKE------GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CG-GGHHHHHHHHHHT------TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc-ccCHHHHHHHHhc------cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00 0000000000000 0001111233567889999999999999999999999999875
No 97
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=360.08 Aligned_cols=250 Identities=22% Similarity=0.301 Sum_probs=186.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~ 124 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-----EIS 124 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-----eEE
Confidence 467999999999999999999999899999999997543 2356889999999999999999999997655 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---Cccccc-cc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHQ-NF 702 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~~~-Df 702 (854)
+||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++. ++..++ ||
T Consensus 125 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp EEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccC
Confidence 9999999999999998654 689999999999999999999999 9999999999999974 555554 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||............+......
T Consensus 196 g~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-- 269 (349)
T 2w4o_A 196 GLSKIVEHQVLM----KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-- 269 (349)
T ss_dssp C--------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC--
T ss_pred ccccccCccccc----ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc--
Confidence 999876543221 22469999999999999899999999999999999999999997543221122222111110
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
...+ ....++..+.+++.+||+.||++|||+.|+++
T Consensus 270 ---~~~~-------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 270 ---FISP-------------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ---CCTT-------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---cCCc-------------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00112456789999999999999999999986
No 98
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.3e-40 Score=358.83 Aligned_cols=253 Identities=22% Similarity=0.247 Sum_probs=192.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.++++++||||+++++++.+.. ..+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-----EEE
Confidence 4689999999999999999999999999999999975433 3367889999999999999999999998655 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc---ccccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHQNFS 703 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~~~Dfg 703 (854)
+||||+++|+|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ ++++|||
T Consensus 93 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 9999999999999997654 689999999999999999999999 999999999999998765 4445999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCcc-chhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMT-GDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
+++........ ....||+.|+|||++.+..++.+ +||||+||++|||++|+.||........ ............
T Consensus 164 ~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~ 238 (361)
T 3uc3_A 164 YSKSSVLHSQP----KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVK 238 (361)
T ss_dssp CC-------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTC
T ss_pred ccccccccCCC----CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCC
Confidence 98754332221 22469999999999988777655 8999999999999999999986433221 111111111110
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.....+ ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~~~~----------------------~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 239 YSIPDD----------------------IRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCCCTT----------------------SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCCCCc----------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000000 0113457899999999999999999999864
No 99
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.1e-40 Score=359.41 Aligned_cols=278 Identities=23% Similarity=0.306 Sum_probs=211.6
Q ss_pred hhccccCccCCCcceEEEEeEE----CCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGIL----GGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG---RQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS---SC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC---Cc
Confidence 6899999999999999999994 5678999999998766556677999999999999999999999986533 23
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++++|.+++..... .+++.+++.|+.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred eEEEEEeecCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 68999999999999999986432 689999999999999999999999 9999999999999988877666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|.+.................||+.|+|||++.+..++.++|||||||++|||++|+.||...... .........
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~------~~~~~~~~~ 245 (327)
T 3lxl_A 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE------FLRMMGCER 245 (327)
T ss_dssp GGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH------HHHHCC---
T ss_pred ccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch------hhhhccccc
Confidence 99988765443322233346889999999998888999999999999999999999998643211 110000000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
..... ....... . ...+......++..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 246 ~~~~~-~~~~~~~-~-----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 246 DVPAL-SRLLELL-E-----EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp -CCHH-HHHHHHH-H-----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred ccccH-HHHHHHh-h-----cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 00000 0000000 0 00011112234567889999999999999999999999999886543
No 100
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.8e-40 Score=358.04 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=201.2
Q ss_pred HHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCC
Q 043388 544 SKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLIKIITICSSIDS 619 (854)
Q Consensus 544 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 619 (854)
....++|.+.+.||+|+||.||+|+++.+++.||+|+++... ....+.+.+|..++..+ +||||+++++++.+.+
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~- 91 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE- 91 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC-
Confidence 345679999999999999999999999999999999997532 34456788999999887 9999999999997755
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccc
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 699 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~ 699 (854)
..|+||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++..+
T Consensus 92 ----~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 158 (345)
T 1xjd_A 92 ----NLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIK 158 (345)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred ----EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEE
Confidence 7899999999999999998754 689999999999999999999999 999999999999999888777
Q ss_pred c-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 700 Q-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 700 ~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
+ |||+++........ ....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+...
T Consensus 159 L~DFG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~ 233 (345)
T 1xjd_A 159 IADFGMCKENMLGDAK---TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMD 233 (345)
T ss_dssp ECCCTTCBCCCCTTCC---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC
T ss_pred EeEChhhhhcccCCCc---ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhC
Confidence 6 99999865432221 23357999999999999999999999999999999999999999754221 111111100
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHH-HHH
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMR-DVV 839 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl 839 (854)
. ... + ..++..+.+++.+||+.||++||++. |+.
T Consensus 234 ~-~~~-----p---------------------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 234 N-PFY-----P---------------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp C-CCC-----C---------------------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred C-CCC-----C---------------------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 0 000 0 01134577899999999999999997 554
No 101
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.8e-40 Score=346.29 Aligned_cols=257 Identities=25% Similarity=0.396 Sum_probs=204.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|.+. ++..||+|+++.... ..+++.+|++++++++||||+++++++.... ..+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 95 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-----PIF 95 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC-----CeE
Confidence 468999999999999999999998 677899999975543 3467899999999999999999999987654 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++..++ |||.+
T Consensus 96 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~ 167 (283)
T 3gen_A 96 IITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLS 167 (283)
T ss_dssp EEECCCTTCBHHHHHHCGGG-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGG
T ss_pred EEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccc
Confidence 99999999999999986432 689999999999999999999999 9999999999999999877766 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
......... ......+|+.|+|||++.+..++.++||||+|+++|||+| |+.||...... ...+.+........
T Consensus 168 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~~- 242 (283)
T 3gen_A 168 RYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYR- 242 (283)
T ss_dssp GGBCCHHHH--STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCCCC-
T ss_pred ccccccccc--cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcccCCCC-
Confidence 876543211 1122347889999999998889999999999999999998 99999754221 11111111100000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
+ ..++..+.+++.+||+.||++|||+.|+++.|.++.+.
T Consensus 243 ----~---------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 243 ----P---------------------HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----C---------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----C---------------------CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 0 01134578899999999999999999999999998764
No 102
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.6e-40 Score=352.10 Aligned_cols=273 Identities=19% Similarity=0.279 Sum_probs=201.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-----EE
Confidence 57999999999999999999999899999999997543 233467889999999999999999999997655 78
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++ ++.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||.
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNG-----DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999976 66666655332 689999999999999999999999 9999999999999998877776 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC---
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSE-ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP--- 780 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~--- 780 (854)
++......... ....||+.|+|||++.+.. ++.++||||+||++|||++|..||...................
T Consensus 148 ~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~ 224 (292)
T 3o0g_A 148 ARAFGIPVRCY---SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 224 (292)
T ss_dssp CEECCSCCSCC---CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred ceecCCccccc---cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 98775433222 2246899999999988766 8999999999999999999888865433322222222221111
Q ss_pred cccccccC-chhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 781 EKVIEIVD-PSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 781 ~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..+..... +... .. ...............+...+.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 225 EQWPSMTKLPDYK-PY--PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCTTGGGSTTCC-CC--CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhhccccccc-cc--ccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 10100000 0000 00 0000000000011123456789999999999999999999986
No 103
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.9e-40 Score=357.11 Aligned_cols=271 Identities=23% Similarity=0.375 Sum_probs=195.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCce---EEEEEEeecc--cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEM---IVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 621 (854)
.++|.+.+.||+|+||.||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++......+
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 4689999999999999999999876654 8999999754 3344678999999999999999999999987654221
Q ss_pred C-ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc
Q 043388 622 A-DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ 700 (854)
Q Consensus 622 ~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~ 700 (854)
. ...++||||+++|+|.+++...........+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 1 12489999999999999997654332333689999999999999999999999 9999999999999999877766
Q ss_pred -ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhc
Q 043388 701 -NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 701 -Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 778 (854)
|||.++......... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .........
T Consensus 179 ~Dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-~~~~~~~~~ 256 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYR-QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYNYLIGGN 256 (323)
T ss_dssp CCCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHHTTC
T ss_pred eecccccccccccccc-ccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-HHHHHhcCC
Confidence 999998775543222 1122357889999999998899999999999999999999 999997543221 111111110
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
... ....++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 257 ~~~---------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 257 RLK---------------------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp CCC---------------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred CCC---------------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000 00112456889999999999999999999999999987654
No 104
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.1e-40 Score=358.95 Aligned_cols=253 Identities=19% Similarity=0.264 Sum_probs=203.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.+.||+|+||.||+|.+..+++.||+|++..........+.+|++++++++||||+++++++.+.. ..+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-----EMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-----EEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-----EEE
Confidence 468999999999999999999999999999999997655445567899999999999999999999997655 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC--c-ccccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD--M-VAHQNFS 703 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--~-~~~~Dfg 703 (854)
+||||+++|+|.+++..... .+++.++..++.||+.||+|||+. +|+||||||+||+++.+ + ++++|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDY-----KMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTC-----CBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 99999999999999976532 689999999999999999999999 99999999999999743 3 4445999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
+++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 197 ~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~--- 268 (387)
T 1kob_A 197 LATKLNPDEIV----KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWE--- 268 (387)
T ss_dssp TCEECCTTSCE----EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCC---
T ss_pred cceecCCCcce----eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC---
Confidence 99877543221 2246999999999999999999999999999999999999999754211 111111111100
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.++. ....++.++.+++.+||+.||++|||+.|+++.
T Consensus 269 ---~~~~------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 269 ---FDED------------------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---CCSS------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---CCcc------------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0000 001124567899999999999999999999863
No 105
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-39 Score=366.20 Aligned_cols=254 Identities=30% Similarity=0.391 Sum_probs=205.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++...+. ..+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG----GLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS----CEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC----ceE
Confidence 468999999999999999999986 6789999997543 45789999999999999999999999865431 579
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++...... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++..++ |||++
T Consensus 264 iv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGRS----VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCTT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 999999999999999876421 478999999999999999999999 9999999999999998887776 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+........ ..++..|+|||++.+..++.++|||||||++|||+| |+.||....... ....+.....
T Consensus 337 ~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~---- 404 (450)
T 1k9a_A 337 KEASSTQDT------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK---- 404 (450)
T ss_dssp EECC------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTTCC----
T ss_pred ccccccccC------CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC----
Confidence 865432211 247889999999999999999999999999999998 999997543221 1111111100
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
...+..++..+.+++.+||+.||++|||+.|+++.|+++....
T Consensus 405 ----------------------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 405 ----------------------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp ----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ----------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 0011223567889999999999999999999999999987653
No 106
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5e-40 Score=363.30 Aligned_cols=282 Identities=17% Similarity=0.169 Sum_probs=204.4
Q ss_pred HhhccccCccCCC--cceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQG--SFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G--~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|++.++||+| +||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 4689999999999 99999999999999999999997543 233467888999999999999999999998765
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++...... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 100 -~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 100 -ELWVVTSFMAYGSAKDLICTHFMD----GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp -EEEEEEECCTTCBHHHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred -EEEEEEEccCCCCHHHHHhhhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 789999999999999999875322 689999999999999999999999 9999999999999998877776 9
Q ss_pred cccccccccCCC----CCCcccccCCcccccCccccCC--CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 702 FSLSHQLDSASK----TPSSSIGIKGTVGYVAPEYGMG--SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 702 fg~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
||.+........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... ....
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~ 250 (389)
T 3gni_B 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKL 250 (389)
T ss_dssp GGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC-
T ss_pred cccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHh
Confidence 999876533211 1111222468999999999987 57999999999999999999999999764332211 1111
Q ss_pred hhcCCcccc------ccc---------CchhhHHHhh---ccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHH
Q 043388 776 KMTLPEKVI------EIV---------DPSLLMEVMA---NNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRD 837 (854)
Q Consensus 776 ~~~~~~~~~------~~~---------d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 837 (854)
....+.... +.. .......... ..........+....+...+.+++.+||+.||++|||+.|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e 330 (389)
T 3gni_B 251 NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSAST 330 (389)
T ss_dssp -------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHH
T ss_pred cCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHH
Confidence 111100000 000 0000000000 0000000011122334567899999999999999999999
Q ss_pred HHHH
Q 043388 838 VVAK 841 (854)
Q Consensus 838 vl~~ 841 (854)
+++.
T Consensus 331 ll~h 334 (389)
T 3gni_B 331 LLNH 334 (389)
T ss_dssp HTTS
T ss_pred HhcC
Confidence 9854
No 107
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.5e-40 Score=374.63 Aligned_cols=258 Identities=23% Similarity=0.430 Sum_probs=210.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
..+|.+.+.||+|+||.||+|++..++..||||+++... ...+.+.+|+.++++++||||++++++|...+ ..+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC-----cEE
Confidence 357999999999999999999999889999999997543 34578999999999999999999999997654 579
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++...... .+++..++.|+.||+.||+|||++ +|+||||||+|||++.++..++ |||++
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTT----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred EEEEccCCCCHHHHHHhcCcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 999999999999999875422 689999999999999999999999 9999999999999998887776 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+........ ......+|..|+|||++.+..++.++|||||||++|||+| |+.||...... ...+.+.....
T Consensus 366 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~---- 437 (495)
T 1opk_A 366 RLMTGDTYT--AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYR---- 437 (495)
T ss_dssp ECCTTCCEE--CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCC----
T ss_pred eeccCCcee--ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----
Confidence 876543221 1223457889999999988889999999999999999999 99999754221 11111111110
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRE 847 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 847 (854)
......++..+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 438 ----------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 438 ----------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp ----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 00112235668899999999999999999999999988753
No 108
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=358.89 Aligned_cols=269 Identities=24% Similarity=0.384 Sum_probs=209.4
Q ss_pred HHhhccccCccCCCcceEEEEeEEC-----CCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILG-----GEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDS 619 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 619 (854)
..++|.+.+.||+|+||.||+|++. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 123 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK- 123 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC-
Confidence 3578999999999999999999996 3568999999975432 33567899999999999999999999997654
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcc------------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHL------------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIV 681 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~iv 681 (854)
..++||||+++|+|.+++....... ....+++.+++.++.||+.||+|||++ +|+
T Consensus 124 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~iv 196 (343)
T 1luf_A 124 ----PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFV 196 (343)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred ----ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 6799999999999999998743210 013689999999999999999999999 999
Q ss_pred eecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCC
Q 043388 682 HGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRR 759 (854)
Q Consensus 682 H~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~ 759 (854)
||||||+||+++.++..++ |||+++......... ......||+.|+|||++.+..++.++|||||||++|||+| |+.
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~ 275 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK-ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 275 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCcccc-ccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence 9999999999998877776 999998765433211 1122458999999999988889999999999999999999 999
Q ss_pred CCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHH
Q 043388 760 PTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVV 839 (854)
Q Consensus 760 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 839 (854)
||...... .....+.. ..... ....++..+.+++.+||+.||++|||+.|++
T Consensus 276 p~~~~~~~--~~~~~~~~---~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~ 327 (343)
T 1luf_A 276 PYYGMAHE--EVIYYVRD---GNILA-----------------------CPENCPLELYNLMRLCWSKLPADRPSFCSIH 327 (343)
T ss_dssp TTTTSCHH--HHHHHHHT---TCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCChH--HHHHHHhC---CCcCC-----------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 99753211 11111111 00000 0112245688999999999999999999999
Q ss_pred HHHHhhhhhhhc
Q 043388 840 AKLCHTRETFLG 851 (854)
Q Consensus 840 ~~L~~~~~~~~~ 851 (854)
+.|+++.+.+.+
T Consensus 328 ~~L~~~~~~~~~ 339 (343)
T 1luf_A 328 RILQRMCERAEG 339 (343)
T ss_dssp HHHHHTTC----
T ss_pred HHHHHHHhhhhh
Confidence 999999887654
No 109
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=355.32 Aligned_cols=282 Identities=24% Similarity=0.393 Sum_probs=213.8
Q ss_pred HhhccccCccCCCcceEEEEeEE----CCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGIL----GGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--- 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR--- 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC---
Confidence 35799999999999999999994 55789999999987666666789999999999999999999999865432
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
...++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 257899999999999999987542 689999999999999999999999 9999999999999998876666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+.................++..|+|||.+.+..++.++|||||||++|||+||..||.... ..+.......
T Consensus 189 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~------~~~~~~~~~~ 262 (326)
T 2w1i_A 189 FGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRMIGND 262 (326)
T ss_dssp CTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH------HHHHHHHCTT
T ss_pred CcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH------HHHHHhhccc
Confidence 9999887654332222223457888999999988889999999999999999999999976321 1111100000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
.........+.... . ...+.+....++.++.+++.+||+.||++|||+.|+++.|+++.+.+.|
T Consensus 263 ~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~g 326 (326)
T 2w1i_A 263 KQGQMIVFHLIELL-K-----NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMAG 326 (326)
T ss_dssp CCTHHHHHHHHHHH-H-----TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred cchhhhHHHHHHHh-h-----cCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcC
Confidence 00000000000000 0 0000111223456788999999999999999999999999999887653
No 110
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.9e-40 Score=346.34 Aligned_cols=254 Identities=23% Similarity=0.349 Sum_probs=200.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+.||+|+||.||+|++. +..||||+++... ....+.+.+|+.++++++||||+++++++.+.+. ..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA---PH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS---SS
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC---CC
Confidence 468999999999999999999996 7789999997543 2334678999999999999999999999876531 26
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCceEecCCccccc-c
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
.++||||+++|+|.+++...... .+++.+++.++.|++.||+|||+. + |+||||||+||+++.++..++ |
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNF----VVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSC----CCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhcccC----CCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 79999999999999999875422 589999999999999999999998 7 999999999999999877666 7
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCc---cchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASM---TGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
||++...... ...||+.|+|||.+.+..++. ++|||||||++|||++|+.||........ ........
T Consensus 157 ~~~~~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~ 227 (271)
T 3kmu_A 157 ADVKFSFQSP--------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEG 227 (271)
T ss_dssp GGSCCTTSCT--------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSC
T ss_pred ccceeeeccc--------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcC
Confidence 7765442221 235899999999988765444 89999999999999999999975422111 11111111
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhh
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRE 847 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 847 (854)
..... ...++..+.+++..||+.||++|||++|+++.|+++.+
T Consensus 228 ~~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 LRPTI--------------------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CCCCC--------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCCCC--------------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11000 01124568899999999999999999999999998864
No 111
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=9.5e-41 Score=353.53 Aligned_cols=253 Identities=19% Similarity=0.332 Sum_probs=200.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCc-------eEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEE-------MIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS 619 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 619 (854)
.++|.+.+.||+|+||.||+|++..++ ..||+|+++.......+.+.+|++++++++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD- 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC-
Confidence 368999999999999999999987655 579999997766666788999999999999999999999997654
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc--
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-- 697 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~-- 697 (854)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ----~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 86 ----ENILVQEFVKFGSLDTYLKKNKN-----CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp ----CCEEEEECCTTCBHHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred ----CCEEEEECCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 57999999999999999987542 589999999999999999999999 9999999999999988763
Q ss_pred -------cccccccccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc
Q 043388 698 -------AHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGL 769 (854)
Q Consensus 698 -------~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~ 769 (854)
+++|||.+....... ...||+.|+|||++.+ ..++.++|||||||++|||++|..|+........
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLPKD-------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR 226 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSCHH-------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred ccccceeeeccCcccccccCcc-------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH
Confidence 445999986553321 2347899999999987 6799999999999999999996555433211111
Q ss_pred hHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 770 TLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
....... ....... ++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 227 -~~~~~~~--~~~~~~~--------------------------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 227 -KLQFYED--RHQLPAP--------------------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp -HHHHHHT--TCCCCCC--------------------------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred -HHHHhhc--cCCCCCC--------------------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 1111110 0000000 023367899999999999999999999999988653
No 112
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=352.67 Aligned_cols=278 Identities=21% Similarity=0.269 Sum_probs=204.7
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-----ccchHHHHHHHHHHHhcc---CCCeeeEEEEeecc
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-----KGAFRSFVAECEALRNIR---HRNLIKIITICSSI 617 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~ 617 (854)
..++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3578999999999999999999998899999999997432 222356778888887775 99999999999876
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 697 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 697 (854)
........++||||++ |+|.+++...... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP----GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 5444446899999997 5999999876532 489999999999999999999999 9999999999999998877
Q ss_pred ccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh
Q 043388 698 AHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK 776 (854)
Q Consensus 698 ~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~ 776 (854)
.++ |||.++........ ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..
T Consensus 159 ~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQMAL----TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFD 233 (308)
T ss_dssp EEECSCSCTTTSTTCCCS----GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHH
T ss_pred EEEeeCccccccCCCccc----CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 776 99999876543322 23568999999999999999999999999999999999999997643221 1122211
Q ss_pred hc---CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 777 MT---LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 777 ~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. ....+.....-. ...+... ..........++...+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLP-RGAFPPR---GPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSC-GGGSCCC---CCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhcc-ccccCCC---CCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11 111111100000 0000000 000000111123566889999999999999999999986
No 113
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.1e-40 Score=354.51 Aligned_cols=258 Identities=23% Similarity=0.343 Sum_probs=202.4
Q ss_pred hhccccCccCCCcceEEEEeEECCCceE----EEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMI----VAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.+|++.+.||+|+||.||+|++..++.. ||+|++.... ......+.+|+.++++++||||+++++++...
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS----- 87 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 5799999999999999999999777664 7777775332 33345678899999999999999999998532
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 88 -~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 88 -SLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp -SEEEEEECCTTCBSHHHHHSSGG-----GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred -ccEEEEEeCCCCCHHHHHHHccc-----cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 47899999999999999986532 688899999999999999999999 9999999999999998877766 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
||+++.......... .....||..|+|||++.+..++.++|||||||++|||+| |+.||...... ...........
T Consensus 159 fg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~ 235 (325)
T 3kex_A 159 FGVADLLPPDDKQLL-YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGER 235 (325)
T ss_dssp CSGGGGSCCCTTCCC------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCB
T ss_pred CCcccccCccccccc-ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCC
Confidence 999998765433221 223468889999999998899999999999999999999 99999754322 22222211110
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
.... ..++..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 236 ~~~~--------------------------~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 236 LAQP--------------------------QICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp CCCC--------------------------TTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred CCCC--------------------------CcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0000 01133467899999999999999999999999987643
No 114
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.3e-40 Score=350.81 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=210.0
Q ss_pred HhhccccCccCCCcceEEEEeEE-----CCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGIL-----GGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|.+.+.||+|+||.||+|.+ ..++..||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 46899999999999999999998 3456899999997543 334567899999999999999999999987654
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcc------------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHL------------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVH 682 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 682 (854)
..++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||++ +|+|
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH 173 (314)
T 2ivs_A 100 ---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVH 173 (314)
T ss_dssp ---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred ---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcc
Confidence 6799999999999999998754210 112589999999999999999999999 9999
Q ss_pred ecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCC
Q 043388 683 GDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRP 760 (854)
Q Consensus 683 ~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~p 760 (854)
|||||+||+++.++..++ |||++.......... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.|
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 252 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEE-CSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccce-eccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999999998876666 999998775443221 1122457889999999988889999999999999999999 9999
Q ss_pred CCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 761 TDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 761 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
|...... ............. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~--~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~ 304 (314)
T 2ivs_A 253 YPGIPPE--RLFNLLKTGHRME--------------------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISK 304 (314)
T ss_dssp STTCCGG--GHHHHHHTTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHH--HHHHHhhcCCcCC--------------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9754322 1111111111000 00112456889999999999999999999999
Q ss_pred HHHhhhhh
Q 043388 841 KLCHTRET 848 (854)
Q Consensus 841 ~L~~~~~~ 848 (854)
.|+++.++
T Consensus 305 ~l~~~~~~ 312 (314)
T 2ivs_A 305 DLEKMMVK 312 (314)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhh
Confidence 99998764
No 115
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.7e-40 Score=345.83 Aligned_cols=259 Identities=21% Similarity=0.312 Sum_probs=196.1
Q ss_pred HhhccccCccCCCcceEEEEeEECC---CceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|++.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 4689999999999999999999864 35679999986543 23456789999999999999999999997432
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 89 -~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 89 -PVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred -ccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 46899999999999999986532 689999999999999999999999 9999999999999998776666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 160 fg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~~~~ 235 (281)
T 1mp8_A 160 FGLSRYMEDSTYYK--ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER 235 (281)
T ss_dssp ---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC
T ss_pred cccccccCcccccc--cccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHcCCC
Confidence 99998775543221 112347889999999988889999999999999999997 99999754322 11111111000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.. ....++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 236 ~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 236 LP--------------------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp CC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CC--------------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 00 00122456789999999999999999999999999998764
No 116
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-40 Score=356.86 Aligned_cols=268 Identities=23% Similarity=0.352 Sum_probs=207.2
Q ss_pred HhhccccCccCCCcceEEEEeEE-----CCCceEEEEEEeecc-cccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGIL-----GGEEMIVAVKVINLK-QKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDS 619 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 619 (854)
.++|.+.+.||+|+||.||+|++ .+++..||||+++.. .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG- 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC-
Confidence 47899999999999999999997 346778999999744 233457899999999999 8999999999987654
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcc-----------------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHL-----------------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVH 682 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH 682 (854)
..++||||+++|+|.+++....... ....+++.+++.++.||+.||+|||+. +|+|
T Consensus 123 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 195 (344)
T 1rjb_A 123 ----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH 195 (344)
T ss_dssp ----SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred ----ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 5799999999999999998754210 012479999999999999999999999 9999
Q ss_pred ecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCC
Q 043388 683 GDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRP 760 (854)
Q Consensus 683 ~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~p 760 (854)
|||||+||+++.++..++ |||++.......... ......||+.|+|||++.+..++.++|||||||++|||+| |+.|
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 274 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccce-eccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence 999999999998887766 999998775543221 1223457889999999988889999999999999999998 9999
Q ss_pred CCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 761 TDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 761 f~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
|...... ............... ...++..+.+++.+||+.||.+|||+.|+++
T Consensus 275 ~~~~~~~-~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 327 (344)
T 1rjb_A 275 YPGIPVD-ANFYKLIQNGFKMDQ--------------------------PFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 327 (344)
T ss_dssp STTCCCS-HHHHHHHHTTCCCCC--------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccCCcH-HHHHHHHhcCCCCCC--------------------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9764322 112222221111000 0112456889999999999999999999999
Q ss_pred HHHhhhhhhh
Q 043388 841 KLCHTRETFL 850 (854)
Q Consensus 841 ~L~~~~~~~~ 850 (854)
.|+.+.+...
T Consensus 328 ~l~~~~~~~~ 337 (344)
T 1rjb_A 328 FLGCQLADAE 337 (344)
T ss_dssp HHHHHC----
T ss_pred HHHHHHHHHH
Confidence 9999876554
No 117
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-39 Score=352.76 Aligned_cols=248 Identities=23% Similarity=0.298 Sum_probs=197.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+..
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~---- 83 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 83 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC----
Confidence 468999999999999999999999999999999997543 22345678999999988 8999999999997655
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++..++ |
T Consensus 84 -~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 84 -RLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEe
Confidence 7899999999999999998654 689999999999999999999999 9999999999999998887776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC----chHhHHhhh
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG----LTLHEFVKM 777 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~----~~~~~~~~~ 777 (854)
||+++........ ....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... .........
T Consensus 154 FG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (345)
T 3a8x_A 154 YGMCKEGLRPGDT---TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230 (345)
T ss_dssp GGGCBCSCCTTCC---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH
T ss_pred ccccccccCCCCc---ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH
Confidence 9999864332221 223579999999999999999999999999999999999999997532110 000000000
Q ss_pred cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH
Q 043388 778 TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM 835 (854)
Q Consensus 778 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 835 (854)
.. .... ..+..++..+.+++.+||+.||.+||++
T Consensus 231 i~-----------------~~~~-------~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 231 IL-----------------EKQI-------RIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HH-----------------HCCC-------CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HH-----------------cCCC-------CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 00 0000 0001124557889999999999999996
No 118
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=358.47 Aligned_cols=267 Identities=25% Similarity=0.380 Sum_probs=211.3
Q ss_pred HhhccccCccCCCcceEEEEeEECC-------CceEEEEEEeeccc-ccchHHHHHHHHHHHhc-cCCCeeeEEEEeecc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGG-------EEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSSI 617 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 617 (854)
.++|.+.+.||+|+||.||+|++.+ .+..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 3689999999999999999999742 44689999997543 23346789999999999 999999999999765
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCc----------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKP 687 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 687 (854)
+ ..++||||+++|+|.+++...... .....+++.+++.|+.||+.||+|||+. +|+||||||
T Consensus 148 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 148 G-----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred C-----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 5 579999999999999999876421 1112589999999999999999999999 999999999
Q ss_pred CceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcc
Q 043388 688 SNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAF 765 (854)
Q Consensus 688 ~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~ 765 (854)
+||+++.++..++ |||+++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~ 298 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCTTC-CCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ceEEEcCCCcEEEcccCcccccccccccc-cccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999998887776 999998775543222 1223457899999999999999999999999999999999 999997532
Q ss_pred cCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 766 TEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
.. ...+.+....... ....++.++.+++.+||+.||++|||++||++.|+++
T Consensus 299 ~~--~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 299 VE--ELFKLLKEGHRMD--------------------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp HH--HHHHHHHTTCCCC--------------------------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH--HHHHHHHcCCCCC--------------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11 1111111110000 0011245688999999999999999999999999998
Q ss_pred hhhhh
Q 043388 846 RETFL 850 (854)
Q Consensus 846 ~~~~~ 850 (854)
.....
T Consensus 351 ~~~~~ 355 (382)
T 3tt0_A 351 VALTS 355 (382)
T ss_dssp HHHSC
T ss_pred HHHHh
Confidence 86543
No 119
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.9e-40 Score=354.81 Aligned_cols=245 Identities=19% Similarity=0.253 Sum_probs=202.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|++++++++||||+++++++.+..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----- 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----
Confidence 46899999999999999999999989999999999643 2344577889999999999999999999987655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++..++ ||
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 7899999999999999998754 689999999999999999999999 9999999999999998887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|+++...... ...+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+..... .
T Consensus 186 g~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~--~ 256 (350)
T 1rdq_E 186 GFAKRVKGRT------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVSGKV--R 256 (350)
T ss_dssp TTCEECSSCB------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC--C
T ss_pred ccceeccCCc------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHcCCC--C
Confidence 9998765432 2346999999999999999999999999999999999999999753211 11111111100 0
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCC-----HHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERME-----MRDVVA 840 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~ 840 (854)
. +..++..+.+++.+||+.||.+||+ ++|+++
T Consensus 257 ~--------------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 257 F--------------------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp C--------------------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred C--------------------------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0 0112455789999999999999998 788765
No 120
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.3e-40 Score=371.84 Aligned_cols=200 Identities=24% Similarity=0.356 Sum_probs=157.9
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecc--cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
++|.+.++||+|+||.||+|++..+++.||||++... .....+++.+|++++++++||||+++++++...........
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 6899999999999999999999999999999998643 22345678899999999999999999999976554444578
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
|+||||++ |+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+|||++.++..++ |||+
T Consensus 133 ~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFRTPV------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEECCCS-EEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccc-cchhhhcccCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 99999985 69999997654 689999999999999999999999 9999999999999999887776 9999
Q ss_pred ccccccCCCCC------------------------CcccccCCcccccCcccc-CCCCCCccchhHHHHHHHHHHHhC
Q 043388 705 SHQLDSASKTP------------------------SSSIGIKGTVGYVAPEYG-MGSEASMTGDVYSFGILLLEMFTG 757 (854)
Q Consensus 705 ~~~~~~~~~~~------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~slGvvl~elltg 757 (854)
++......... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 98775432110 122346789999999976 456799999999999999999993
No 121
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-39 Score=342.32 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=203.7
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
..++|++.+.||+|+||.||+|.+..++..||+|++........+.+.+|++++++++||||+++++++.+.. ..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-----DI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----eE
Confidence 3578999999999999999999999999999999998766666788999999999999999999999997655 68
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe---cCCccccc-c
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHQ-N 701 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~~~-D 701 (854)
++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||++ +.++..++ |
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 99999999999999998754 689999999999999999999999 99999999999999 55555555 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+......... ....||+.|+|||++.+. ++.++||||||+++|||++|+.||....... ............
T Consensus 153 fg~~~~~~~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~ 226 (277)
T 3f3z_A 153 FGLAARFKPGKMM----RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIREGTFTF 226 (277)
T ss_dssp CTTCEECCTTSCB----CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCC
T ss_pred cccceeccCccch----hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCC
Confidence 9999877644322 224699999999998664 8999999999999999999999997542211 111111110000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+ ......++..+.+++.+||+.||++|||+.|+++
T Consensus 227 -------~-----------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 -------P-----------------EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp -------C-----------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -------C-----------------chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0001122456889999999999999999999986
No 122
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=368.97 Aligned_cols=350 Identities=19% Similarity=0.204 Sum_probs=214.9
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
-+.++++++.++ .+|..+. +++++|+|++|+|++..+..|..+++|++|+|++|.|+++.|.+|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 467888888888 6777664 5788888888888887788888888888888888888888888888888888888888
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+|+ .+|...|.++++|++|++++|++..+ .|..|.++++|++|+|++|+++++.+..|.++
T Consensus 90 n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~-----------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 151 (477)
T 2id5_A 90 NRLK-LIPLGVFTGLSNLTKLDISENKIVIL-----------------LDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 151 (477)
T ss_dssp SCCC-SCCTTSSTTCTTCCEEECTTSCCCEE-----------------CTTTTTTCTTCCEEEECCTTCCEECTTSSTTC
T ss_pred CcCC-ccCcccccCCCCCCEEECCCCccccC-----------------ChhHccccccCCEEECCCCccceeChhhccCC
Confidence 8887 77776666666666666666655432 34556666666666666666666666555555
Q ss_pred CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccc
Q 043388 178 KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLV 257 (854)
Q Consensus 178 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~ 257 (854)
++|++|+|++|+++.++. ..|.++++ |+.|++++|.+++..+..|..++
T Consensus 152 ~~L~~L~l~~n~l~~~~~------~~l~~l~~-------------------------L~~L~l~~n~i~~~~~~~~~~l~ 200 (477)
T 2id5_A 152 NSLEQLTLEKCNLTSIPT------EALSHLHG-------------------------LIVLRLRHLNINAIRDYSFKRLY 200 (477)
T ss_dssp TTCCEEEEESCCCSSCCH------HHHTTCTT-------------------------CCEEEEESCCCCEECTTCSCSCT
T ss_pred CCCCEEECCCCcCcccCh------hHhcccCC-------------------------CcEEeCCCCcCcEeChhhcccCc
Confidence 555555555554432221 12223333 33333333333333334444455
Q ss_pred cCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccC
Q 043388 258 NLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDAS 337 (854)
Q Consensus 258 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 337 (854)
+|+.|++++|.+.+..|.. .....+|+.|+|++|++++..+..|..+++|+.|+++
T Consensus 201 ~L~~L~l~~~~~~~~~~~~------------------------~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 256 (477)
T 2id5_A 201 RLKVLEISHWPYLDTMTPN------------------------CLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLS 256 (477)
T ss_dssp TCCEEEEECCTTCCEECTT------------------------TTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECC
T ss_pred ccceeeCCCCccccccCcc------------------------cccCccccEEECcCCcccccCHHHhcCccccCeeECC
Confidence 5555555554443333333 3333344444444444443222344455555555555
Q ss_pred CCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEcc
Q 043388 338 HNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVS 417 (854)
Q Consensus 338 ~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 417 (854)
+|++++..+. .+.. +.+|+.|+|++|++++..|.+|..+++|+.|+|+
T Consensus 257 ~n~l~~~~~~-------------------------~~~~-------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 257 YNPISTIEGS-------------------------MLHE-------LLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp SSCCCEECTT-------------------------SCTT-------CTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred CCcCCccChh-------------------------hccc-------cccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 5554421111 1111 2346666666666666666777777777777777
Q ss_pred CcccccccchhhcCccCCCeeecccccCcccCCCCccccCcccccccccccccCCccc
Q 043388 418 SNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFSNKTKISLQVNVKLCGGIDE 475 (854)
Q Consensus 418 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~ 475 (854)
+|+|++..+..|..+++|+.|+|++|+|.+.++..+.+.......+.++...|.+|..
T Consensus 305 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 305 GNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEF 362 (477)
T ss_dssp SSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESGG
T ss_pred CCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCchH
Confidence 7777766666777777777777777777777665555444444455666667766554
No 123
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.6e-40 Score=357.60 Aligned_cols=248 Identities=22% Similarity=0.278 Sum_probs=194.8
Q ss_pred cccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeEEEe
Q 043388 551 ASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKALVFE 630 (854)
Q Consensus 551 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 630 (854)
...+.||+|+||.||+|++..+++.||+|+++.......+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv~E 166 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-----DIVLVME 166 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEEEEE
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEEEEe
Confidence 33678999999999999999899999999998765555678999999999999999999999997755 6899999
Q ss_pred eccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe--cCCcccc-cccccccc
Q 043388 631 YMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL--DHDMVAH-QNFSLSHQ 707 (854)
Q Consensus 631 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~~-~Dfg~~~~ 707 (854)
|+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++..+ +|||+++.
T Consensus 167 ~~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 167 YVDGGELFDRIIDESY-----NLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp CCTTCEEHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred CCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 9999999999876432 689999999999999999999999 99999999999999 4444444 59999987
Q ss_pred cccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccccccc
Q 043388 708 LDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEIV 787 (854)
Q Consensus 708 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (854)
....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+....+.. .
T Consensus 239 ~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~-----~ 308 (373)
T 2x4f_A 239 YKPREKL----KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWDL-----E 308 (373)
T ss_dssp CCTTCBC----CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCS-----C
T ss_pred cCCcccc----ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCC-----C
Confidence 7544322 1246999999999999889999999999999999999999999754221 1112222111100 0
Q ss_pred CchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 788 DPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 788 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+ .....++.++.+++.+||+.||.+|||+.|+++
T Consensus 309 ~-------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 309 D-------------------EEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp S-------------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred h-------------------hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 001122456889999999999999999999987
No 124
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.1e-40 Score=344.39 Aligned_cols=253 Identities=25% Similarity=0.404 Sum_probs=189.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc----ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|++.+.||+|+||.||+|.+. +..||||+++... ....+.+.+|+++++.++||||+++++++...+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 79 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP---- 79 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC----
Confidence 357999999999999999999986 7789999986442 233567899999999999999999999997655
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC--------
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-------- 694 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-------- 694 (854)
..++||||+++++|.+++... .+++..++.++.|++.||+|||++...+|+||||||+||+++.
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~ 151 (271)
T 3dtc_A 80 -NLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151 (271)
T ss_dssp --CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCS
T ss_pred -ceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccccccc
Confidence 679999999999999998643 6889999999999999999999992112999999999999985
Q ss_pred Ccccc-cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 695 DMVAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 695 ~~~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
++..+ +|||.+......... ...||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ...
T Consensus 152 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~ 225 (271)
T 3dtc_A 152 NKILKITDFGLAREWHRTTKM-----SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-AYG 225 (271)
T ss_dssp SCCEEECCCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-HHH
T ss_pred CcceEEccCCccccccccccc-----CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHh
Confidence 34444 599999876543322 24689999999999888899999999999999999999999975422111 001
Q ss_pred HhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 774 FVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 774 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
......... . ...++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 226 ~~~~~~~~~----~----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 VAMNKLALP----I----------------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHTSCCCCC----C----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hhcCCCCCC----C----------------------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000000 0 011245688999999999999999999999999764
No 125
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.7e-40 Score=347.97 Aligned_cols=259 Identities=29% Similarity=0.458 Sum_probs=193.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.++||+|+||.||+|++.. .||+|+++... ....+.+.+|++++++++||||+++++++... .
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~ 93 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP------Q 93 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------S
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC------c
Confidence 3579999999999999999998763 39999997543 23356789999999999999999999976432 4
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 165 (289)
T 3og7_A 94 LAIVTQWCEGSSLYHHLHASET-----KFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFG 165 (289)
T ss_dssp CEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred cEEEEEecCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccce
Confidence 6899999999999999976542 689999999999999999999999 9999999999999998887666 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhh-cC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGM---GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKM-TL 779 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~-~~ 779 (854)
++.......... ......||+.|+|||++. +..++.++|||||||++|||++|+.||....... ...+.... ..
T Consensus 166 ~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~ 243 (289)
T 3og7_A 166 LATEKSRWSGSH-QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGSL 243 (289)
T ss_dssp -------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTSC
T ss_pred eccccccccccc-cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhccccc
Confidence 998665422211 112346999999999986 5668899999999999999999999997543221 11121111 11
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhh
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRE 847 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 847 (854)
...... ....++..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 244 ~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 244 SPDLSK-----------------------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCCTTS-----------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred Ccchhh-----------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111100 011225668899999999999999999999999998754
No 126
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=365.96 Aligned_cols=285 Identities=18% Similarity=0.235 Sum_probs=212.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|.+.++||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++..... ...+
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~---~~~~ 85 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT---RHKV 85 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT---CCEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCC---CeeE
Confidence 57999999999999999999999899999999997543 3345778899999999999999999999876442 2579
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe----cCCccccc-c
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHQ-N 701 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~~~-D 701 (854)
+||||+++|+|.+++...... ..+++.+++.++.||+.||+|||+. +|+||||||+||++ +.+...++ |
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 86 LIMEFCPCGSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp EEECCCTTEEHHHHTTSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred EEEecCCCCCHHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEec
Confidence 999999999999999875421 1489999999999999999999999 99999999999999 66665555 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCC--------CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch---
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG--------SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT--- 770 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~--- 770 (854)
||.++........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 160 FG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~ 235 (396)
T 4eut_A 160 FGAARELEDDEQF----VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235 (396)
T ss_dssp GGGCEECCCGGGS----SCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHH
T ss_pred CCCceEccCCCcc----ccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHH
Confidence 9999877554322 23469999999998764 46788999999999999999999999754322211
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
+........+..+....... .... ..... .+........+...+.+++.+||+.||++|||++|+++.++++.+.
T Consensus 236 ~~~~~~~~p~~~~~~~~~~~-~~~~-~~~~~-~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 236 MYKIITGKPSGAISGVQKAE-NGPI-DWSGD-MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHHHSCCTTCCEEEECST-TCCE-EEESS-CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHHHhcCCCcccchhheecc-CCCc-ccCcc-CCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 22222221111111100000 0000 00000 0000112244567788999999999999999999999999887654
No 127
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=349.76 Aligned_cols=276 Identities=24% Similarity=0.337 Sum_probs=204.8
Q ss_pred HHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc--cCCCeeeEEEEeeccCCCC
Q 043388 544 SKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI--RHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 544 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~ 621 (854)
....++|++.+.||+|+||.||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++..... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~ 106 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG-S 106 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG-G
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC-C
Confidence 345579999999999999999999986 7889999986432 24455666666655 89999999999876532 1
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEeecCCCCceEecCCc
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC-----QPPIVHGDLKPSNVLLDHDM 696 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~-----~~~ivH~Dlkp~NIll~~~~ 696 (854)
....++||||+++|+|.+++... .+++.+++.++.|++.||+|||+.+ +++|+||||||+||+++.++
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCceEEEEeccCCCcHHHHhhcc-------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 23689999999999999999754 6889999999999999999999762 34899999999999999887
Q ss_pred cccc-ccccccccccCCCCCC-cccccCCcccccCccccCCCCCCcc------chhHHHHHHHHHHHhC----------C
Q 043388 697 VAHQ-NFSLSHQLDSASKTPS-SSIGIKGTVGYVAPEYGMGSEASMT------GDVYSFGILLLEMFTG----------R 758 (854)
Q Consensus 697 ~~~~-Dfg~~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~------sDv~slGvvl~elltg----------~ 758 (854)
.+++ |||++........... ......||+.|+|||++.+...+.+ +|||||||++|||+|| +
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~ 259 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence 7776 9999987654433211 1123469999999999988766554 9999999999999999 5
Q ss_pred CCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHH
Q 043388 759 RPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDV 838 (854)
Q Consensus 759 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 838 (854)
.||........................... .......++.++.+++.+||+.||++|||+.||
T Consensus 260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 260 LPYHDLVPSDPSYEDMREIVCIKKLRPSFP-----------------NRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSCCCCCCC-----------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccHhhhcCCCCchhhhHHHHhhhccCcccc-----------------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 555443322222222221111111111110 011123567889999999999999999999999
Q ss_pred HHHHHhhhhhh
Q 043388 839 VAKLCHTRETF 849 (854)
Q Consensus 839 l~~L~~~~~~~ 849 (854)
++.|+.+.+..
T Consensus 323 l~~L~~l~~~~ 333 (337)
T 3mdy_A 323 KKTLAKMSESQ 333 (337)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhhc
Confidence 99999998764
No 128
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.6e-40 Score=353.11 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=198.4
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCce
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 624 (854)
..++|.+.+.||+|+||.||+|.+..+++.||||+++..... ..+|++++.++ +||||+++++++.+.. .
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGK-----Y 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSS-----E
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCC-----E
Confidence 457899999999999999999999999999999999755332 35788888888 7999999999997655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC-c----ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-M----VAH 699 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~----~~~ 699 (854)
.|+||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||++..+ + +++
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 899999999999999998654 689999999999999999999999 99999999999998543 2 445
Q ss_pred cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 700 QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
+|||+++........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+......
T Consensus 162 ~Dfg~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~ 236 (342)
T 2qr7_A 162 CDFGFAKQLRAENGL---LMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILARIG 236 (342)
T ss_dssp CCCTTCEECBCTTCC---BCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHHHH
T ss_pred EECCCcccCcCCCCc---eeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHHHc
Confidence 599999877554322 12346899999999998878999999999999999999999999753221 1111111100
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.... .... . ....++..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~-~~~~-~------------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 237 SGKF-SLSG-G------------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HCCC-CCCS-T------------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cCCc-ccCc-c------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 0000 0 001124557899999999999999999998763
No 129
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-39 Score=346.12 Aligned_cols=266 Identities=20% Similarity=0.282 Sum_probs=205.0
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
..++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+|+++++.++|++++..++++.... ...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEG----DYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEET----TEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCC----Cce
Confidence 357899999999999999999999889999999987654332 45788999999999988887777765433 267
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe---cCCccccc-c
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHQ-N 701 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~~~-D 701 (854)
++||||+ +++|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||++ +.++..++ |
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 8899999986432 689999999999999999999999 99999999999999 56665555 9
Q ss_pred cccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC--chHhHHh
Q 043388 702 FSLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG--LTLHEFV 775 (854)
Q Consensus 702 fg~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~--~~~~~~~ 775 (854)
||.++......... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .......
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 231 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS 231 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh
Confidence 99998876543321 12234579999999999999999999999999999999999999998643221 1111111
Q ss_pred hhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 776 KMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 776 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
...... ........++..+.+++..||+.||++|||++|+++.|+++.++.
T Consensus 232 ~~~~~~-----------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 232 EKKMST-----------------------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHS-----------------------CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred cccccc-----------------------hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 100000 000011123567889999999999999999999999999988765
No 130
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.7e-40 Score=352.75 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=181.2
Q ss_pred hhcccc---CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASS---NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~---~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 623 (854)
++|.+. +.||+|+||.||+|++..+++.||||++... ....+.+|+.+++.+. ||||+++++++.+..
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~----- 79 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL----- 79 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----
Confidence 456654 7899999999999999989999999999643 3467789999999996 999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----ccc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAH 699 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~~ 699 (854)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ +++
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 150 (325)
T 3kn6_A 80 HTFLVMELLNGGELFERIKKKK------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKI 150 (325)
T ss_dssp EEEEEECCCCSCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEE
T ss_pred EEEEEEEccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEE
Confidence 7899999999999999998764 789999999999999999999999 999999999999997654 444
Q ss_pred cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccC--CchHhHHhhh
Q 043388 700 QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTE--GLTLHEFVKM 777 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~--~~~~~~~~~~ 777 (854)
+|||+++......... ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....
T Consensus 151 ~Dfg~a~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 227 (325)
T 3kn6_A 151 IDFGFARLKPPDNQPL---KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKK 227 (325)
T ss_dssp CCCTTCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHH
T ss_pred eccccceecCCCCCcc---cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHH
Confidence 5999998765433222 2246899999999999999999999999999999999999999764321 1111111111
Q ss_pred cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 778 TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 778 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
...... .. . ......++.++.+++.+||+.||++|||++|+++
T Consensus 228 i~~~~~-~~-~------------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 228 IKKGDF-SF-E------------------GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTTTCC-CC-C------------------SHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHcCCC-CC-C------------------cccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 111100 00 0 0111223566889999999999999999999874
No 131
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.8e-40 Score=353.87 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=201.1
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 621 (854)
..++|.+.+.||+|+||.||+|++..+++.||||+++.. .....+.+.+|..++..+ +||+|+++++++.+.+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 357899999999999999999999989999999999753 234457788999999988 8999999999987655
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
..|+||||++||+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++..++
T Consensus 95 --~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 95 --RLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 7899999999999999998754 689999999999999999999999 9999999999999999887776
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+......
T Consensus 164 DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~~ 239 (353)
T 2i0e_A 164 DFGMCKENIWDGV---TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHNVA 239 (353)
T ss_dssp CCTTCBCCCCTTC---CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCC
T ss_pred eCCcccccccCCc---ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCCCC
Confidence 9999986433222 122357999999999999999999999999999999999999999753211 111111111000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH-----HHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM-----RDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 840 (854)
. +..++.++.+++.+||+.||++||++ +|+++
T Consensus 240 --~--------------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 --Y--------------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --C--------------------------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --C--------------------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 00124557899999999999999964 66554
No 132
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.8e-40 Score=350.43 Aligned_cols=267 Identities=21% Similarity=0.358 Sum_probs=211.2
Q ss_pred HhhccccCccCCCcceEEEEeEE-----CCCceEEEEEEeecccc-cchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGIL-----GGEEMIVAVKVINLKQK-GAFRSFVAECEALRNI-RHRNLIKIITICSSIDS 619 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 619 (854)
.++|.+.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 36899999999999999999985 44678999999975433 3356789999999999 9999999999997655
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCc------------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDH------------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKP 687 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 687 (854)
..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||++ +|+||||||
T Consensus 101 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp 173 (313)
T 1t46_A 101 ----PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAA 173 (313)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred ----CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCcc
Confidence 579999999999999999875421 1122589999999999999999999999 999999999
Q ss_pred CceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcc
Q 043388 688 SNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAF 765 (854)
Q Consensus 688 ~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~ 765 (854)
+||+++.++..++ |||.+.......... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 174 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 174 RNILLTHGRITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp GGEEEETTTEEEECCCGGGSCTTSCTTSE-ECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ceEEEcCCCCEEEccccccccccccccce-eccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 9999998887666 999998776543321 1122347889999999988899999999999999999999 999997543
Q ss_pred cCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 766 TEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
... .............. ...++..+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 253 ~~~-~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 253 VDS-KFYKMIKEGFRMLS--------------------------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp SSH-HHHHHHHHTCCCCC--------------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred chh-HHHHHhccCCCCCC--------------------------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 221 11121111111000 011245678999999999999999999999999998
Q ss_pred hhhh
Q 043388 846 RETF 849 (854)
Q Consensus 846 ~~~~ 849 (854)
.+..
T Consensus 306 ~~~~ 309 (313)
T 1t46_A 306 ISES 309 (313)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7754
No 133
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-39 Score=349.70 Aligned_cols=272 Identities=24% Similarity=0.408 Sum_probs=201.3
Q ss_pred HHhhccccCccCCCcceEEEEeEECC---CceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
..++|.+.+.||+|+||.||+|.+.. ++..||+|+++... ....+.+.+|+.++++++||||+++++++......
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 35789999999999999999998754 56689999997543 23346789999999999999999999999876644
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ 700 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~ 700 (854)
+....++||||+++|+|.+++...........+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEE
Confidence 4446799999999999999996543222233789999999999999999999999 9999999999999999877666
Q ss_pred -ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhc
Q 043388 701 -NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 701 -Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 778 (854)
|||.+.......... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... .........
T Consensus 189 ~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~ 265 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYR-QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYLLHG 265 (313)
T ss_dssp CSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTT
T ss_pred eecCcceecccccccC-cccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHHcC
Confidence 999998775443221 1122357889999999999999999999999999999999 88998754222 111111111
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.... ....++..+.+++.+||+.||++|||+.++++.|+++.+.+
T Consensus 266 ~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 266 HRLK--------------------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp CCCC--------------------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCCC--------------------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0000 01122456889999999999999999999999999998765
No 134
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.6e-40 Score=345.61 Aligned_cols=259 Identities=24% Similarity=0.432 Sum_probs=211.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
..+|.+.+.||+|+||.||+|.+..++..||+|++.... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 85 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFY 85 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CEE
Confidence 568999999999999999999999889999999997543 34578899999999999999999999987654 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCTT----TSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred EEEEcCCCCcHHHHHHhcccC----CccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccc
Confidence 999999999999999875432 689999999999999999999999 9999999999999998876665 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
......... ......+|+.|+|||.+.+..++.++||||||+++|+|++ |..||...... ...+.........
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~~-- 232 (288)
T 3kfa_A 159 RLMTGDTYT--AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRME-- 232 (288)
T ss_dssp GTSCSSSSE--EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCCC--
T ss_pred eeccCCccc--cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCCCC--
Confidence 877644322 1223457889999999998899999999999999999999 99999754221 1111111111000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
....++..+.+++..|++.||.+|||+.|+++.|+.+...
T Consensus 233 ------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 233 ------------------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp ------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------------------------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 0112245688999999999999999999999999987754
No 135
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.3e-40 Score=372.63 Aligned_cols=258 Identities=23% Similarity=0.414 Sum_probs=207.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|.+.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.++++++||||+++++++.. + ..+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~-~-----~~~ 258 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E-----PIY 258 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS-S-----SCE
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC-C-----ccE
Confidence 468999999999999999999997 57789999997544 346789999999999999999999999852 2 479
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++..... ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.++..++ |||++
T Consensus 259 lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a 331 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 331 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred EEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence 99999999999999986431 2678899999999999999999999 9999999999999999887776 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+......... .....+|..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+....
T Consensus 332 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~----- 402 (454)
T 1qcf_A 332 RVIEDNEYTA--REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGY----- 402 (454)
T ss_dssp GGBCCHHHHT--TCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTC-----
T ss_pred eEcCCCceec--cCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC-----
Confidence 8765432111 122347889999999988889999999999999999999 99999753211 1111111100
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
+.+....++..+.+++.+||+.||++|||+.+|++.|+++....
T Consensus 403 ---------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 403 ---------------------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp ---------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred ---------------------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 00111223567889999999999999999999999999886543
No 136
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4e-39 Score=346.21 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=203.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc------chHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG------AFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 88 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-- 88 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC--
Confidence 46899999999999999999999989999999999754321 3567899999999999999999999987655
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 696 (854)
..++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 89 ---~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 89 ---DVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp ---EEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred ---EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcC
Confidence 7899999999999999998654 688999999999999999999999 999999999999998876
Q ss_pred -ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 697 -VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 697 -~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
++++|||.+......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......
T Consensus 157 ~~kl~Dfg~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~ 231 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANIT 231 (321)
T ss_dssp CEEECCCTTCEECCTTCCC----CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHH
T ss_pred CEEEccCccceecCccccc----cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHH
Confidence 344599999877653322 2346999999999999989999999999999999999999999753211 0111111
Q ss_pred hhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 776 KMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 776 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.... ..++. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~------~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 232 SVSY------DFDEE------------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp TTCC------CCCHH------------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hccc------ccChh------------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1000 00000 01122456889999999999999999999986
No 137
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.6e-39 Score=343.74 Aligned_cols=266 Identities=20% Similarity=0.278 Sum_probs=208.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|++..+++.||||++..... .+.+.+|+.+++.++|++++..+.++.... ...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG----DYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEET----TEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCC----CceE
Confidence 3689999999999999999999988999999999875443 356889999999999988777777665433 2679
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec---CCccccc-cc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHQ-NF 702 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~~~-Df 702 (854)
+||||+ +++|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++..++ ||
T Consensus 82 lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEec-CCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999999 8899999985432 689999999999999999999999 999999999999994 5555554 99
Q ss_pred ccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC--chHhHHhh
Q 043388 703 SLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG--LTLHEFVK 776 (854)
Q Consensus 703 g~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~--~~~~~~~~ 776 (854)
|.+.......... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 232 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 232 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc
Confidence 9998876543321 11234579999999999999999999999999999999999999998643211 11111111
Q ss_pred hcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 777 MTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 777 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
..... ........++..+.+++.+||+.||++|||+.||++.|+++..+..
T Consensus 233 ~~~~~-----------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 233 KKMST-----------------------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHS-----------------------CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cccCC-----------------------chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00000 0000112235678899999999999999999999999999887653
No 138
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.1e-40 Score=349.17 Aligned_cols=267 Identities=21% Similarity=0.306 Sum_probs=197.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
++|++.+.||+|+||.||+|++. +++.||+|+++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-----RL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-----CE
T ss_pred ccchhhhhcccCCCEEEEEEEcC-CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-----eE
Confidence 47999999999999999999994 78899999996443 233467889999999999999999999997654 68
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++ +|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999986 99999876532 688999999999999999999999 9999999999999998877776 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc---CC
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT---LP 780 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~---~~ 780 (854)
+.......... ....||+.|+|||++.+. .++.++||||+||++|||++|+.||....... ......... ..
T Consensus 147 ~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 222 (288)
T 1ob3_A 147 ARAFGIPVRKY---THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNS 222 (288)
T ss_dssp HHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred ccccCcccccc---ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCCh
Confidence 98765432221 124589999999998764 58999999999999999999999997643221 111111110 00
Q ss_pred ccccc-----ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 781 EKVIE-----IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 781 ~~~~~-----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..+.. ..++... .. .+.........+...+.+++.+||+.||++|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 223 KNWPNVTELPKYDPNFT----VY---EPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp TTSTTGGGSTTCCTTCC----CC---CCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhchhhhcccccccccc----cc---cCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00100 0000000 00 000000011123456789999999999999999999976
No 139
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.3e-40 Score=363.47 Aligned_cols=259 Identities=18% Similarity=0.244 Sum_probs=204.3
Q ss_pred HHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeecc
Q 043388 541 AELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSI 617 (854)
Q Consensus 541 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 617 (854)
.++....++|.+.++||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 34444567999999999999999999999999999999999642 223345678999999999999999999999865
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 697 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 697 (854)
. ..|+||||++||+|.+++... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.
T Consensus 142 ~-----~~~lV~E~~~gg~L~~~l~~~-------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 142 R-----YLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp S-----EEEEEECCCTTEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred C-----EEEEEEeCCCCCcHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 5 789999999999999998753 578899999999999999999999 9999999999999999887
Q ss_pred ccc-ccccccccccCCCCCCcccccCCcccccCccccCCCC----CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHh
Q 043388 698 AHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSE----ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLH 772 (854)
Q Consensus 698 ~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~ 772 (854)
.++ |||+++........ .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ....
T Consensus 207 ikL~DFG~a~~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~ 283 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYS 283 (410)
T ss_dssp EEECCCTTCEECCTTSEE--ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHH
T ss_pred EEEeccceeEeeccCCcc--cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHH
Confidence 776 99999876543321 122357999999999987655 789999999999999999999999754211 1111
Q ss_pred HHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCC--CCCHHHHHHH
Q 043388 773 EFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFE--RMEMRDVVAK 841 (854)
Q Consensus 773 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~ 841 (854)
.+......... +....++.++.+++.+||..+|.+ ||++.||++.
T Consensus 284 ~i~~~~~~~~~------------------------p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 284 KIMNHKNSLTF------------------------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHHTHHHHCCC------------------------CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHHhccccccC------------------------CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11110000000 000012455788999999999988 9999999864
No 140
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.8e-39 Score=339.78 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=205.4
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+ .
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----I 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-----E
Confidence 4578999999999999999999999899999999997543 334577899999999999999999999987655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp EEEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEEecCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 899999999999999987643 689999999999999999999999 9999999999999998877666 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
.+.......... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||............+........
T Consensus 151 ~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (276)
T 2yex_A 151 LATVFRYNNRER-LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 229 (276)
T ss_dssp TCEECEETTEEC-CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTST
T ss_pred CccccCCCcchh-cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccC
Confidence 998765432211 1123468999999999988665 78999999999999999999999865433333333222110000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
....++..+.+++.+||+.||++|||+.|+++
T Consensus 230 --------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 --------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --------------------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00112445778999999999999999999986
No 141
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.4e-40 Score=361.62 Aligned_cols=282 Identities=21% Similarity=0.325 Sum_probs=196.1
Q ss_pred HHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc--cccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCCC
Q 043388 545 KATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK--QKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSKG 621 (854)
Q Consensus 545 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 621 (854)
...++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.++.++. ||||+++++++...+.
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~-- 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND-- 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS--
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC--
Confidence 3467899999999999999999999999999999998533 2334567889999999997 9999999999875432
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
...|+||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++
T Consensus 84 -~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 84 -RDVYLVFDYME-TDLHAVIRAN-------ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp -SCEEEEEECCS-EEHHHHHHHT-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred -CEEEEEecccC-cCHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 26799999997 5999998763 678999999999999999999999 9999999999999999887776
Q ss_pred ccccccccccCCCC------------------CCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCC
Q 043388 701 NFSLSHQLDSASKT------------------PSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPT 761 (854)
Q Consensus 701 Dfg~~~~~~~~~~~------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf 761 (854)
|||+++.+...... .......+||+.|+|||++.+ ..++.++||||+||++|||++|++||
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 99999876432111 111233579999999999887 57899999999999999999999999
Q ss_pred CCcccCCchHhHHhhhc-CCc-ccccccCchhhHHHhhc----c--------chhhHhh-----hhhHHHHHHHHHHHhh
Q 043388 762 DAAFTEGLTLHEFVKMT-LPE-KVIEIVDPSLLMEVMAN----N--------SMIQEDR-----RARTQDCLNAITRTGV 822 (854)
Q Consensus 762 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~d~~~~~~~~~~----~--------~~~~~~~-----~~~~~~~~~~l~~l~~ 822 (854)
.+.... ..+..+.... .+. .....+........... . ...+... ......+...+.+++.
T Consensus 232 ~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~ 310 (388)
T 3oz6_A 232 PGSSTM-NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLD 310 (388)
T ss_dssp CCSSHH-HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHH
T ss_pred CCCCHH-HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHH
Confidence 864321 1112221111 111 00011111110000000 0 0000000 0000123556889999
Q ss_pred cccCCCCCCCCCHHHHHHH
Q 043388 823 LCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 823 ~cl~~dP~~RPs~~evl~~ 841 (854)
+||+.||++|||++|+++.
T Consensus 311 ~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 311 KLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHCCSSGGGSCCHHHHTTS
T ss_pred HhhccCcccCCCHHHHhCC
Confidence 9999999999999999864
No 142
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=9.3e-40 Score=346.14 Aligned_cols=262 Identities=24% Similarity=0.331 Sum_probs=206.3
Q ss_pred HhhccccC-ccCCCcceEEEEeEE--CCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCC
Q 043388 547 TSEFASSN-MIGQGSFGSVYKGIL--GGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 547 ~~~~~~~~-~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 621 (854)
..+|.+.+ .||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.. +
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~--- 90 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-E--- 90 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-S---
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-C---
Confidence 46788888 999999999999954 5578899999997543 2235678999999999999999999999832 2
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++
T Consensus 91 --~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 91 --SWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp --SEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred --CcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEc
Confidence 4789999999999999998754 688999999999999999999999 9999999999999998886666
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
|||++.................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+....
T Consensus 160 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~ 237 (291)
T 1xbb_A 160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGE 237 (291)
T ss_dssp CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTC
T ss_pred cCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC
Confidence 99999877654432222223347889999999988889999999999999999999 99999754221 1111111110
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
... ....++..+.+++.+||+.||++|||+.|+++.|+++.....+
T Consensus 238 ~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 238 RMG--------------------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp CCC--------------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--------------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 000 0012245688999999999999999999999999998876543
No 143
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=354.22 Aligned_cols=251 Identities=23% Similarity=0.370 Sum_probs=192.8
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhccC--CCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNIRH--RNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 623 (854)
++|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.++.+++| |||+++++++....
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~----- 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----- 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC-----
Confidence 57999999999999999999986 688999999975432 334678999999999976 99999999987655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccccccc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQNFS 703 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~Dfg 703 (854)
..++|||| .+|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++++.++++|||
T Consensus 83 ~~~lv~e~-~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~~~~~kl~DFG 152 (343)
T 3dbq_A 83 YIYMVMEC-GNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFG 152 (343)
T ss_dssp EEEEEECC-CSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTEEEECCCS
T ss_pred EEEEEEeC-CCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEECCcEEEeecc
Confidence 78999995 5789999998764 688999999999999999999999 9999999999999997776667999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-----------CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHh
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-----------SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLH 772 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~ 772 (854)
+++......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 153 ~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~ 231 (343)
T 3dbq_A 153 IANQMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 231 (343)
T ss_dssp SSCCC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred cccccCcccccc-cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHH
Confidence 998775443221 1223569999999999864 6789999999999999999999999975422211111
Q ss_pred HHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 773 EFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 773 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
............. .+...+.+++..||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~--------------------------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 AIIDPNHEIEFPD--------------------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHCTTSCCCCCC--------------------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhcCCcccCCcc--------------------------cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111111110100 012457789999999999999999999864
No 144
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=9.9e-40 Score=365.05 Aligned_cols=206 Identities=23% Similarity=0.311 Sum_probs=170.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc--cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++.. .....+++.+|++++++++||||+++++++..........
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 36899999999999999999999999999999999643 2234567899999999999999999999997665433456
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.|+||||+++ +|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 105 ~~lv~e~~~~-~L~~~~~~~~------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIADS-DLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCSE-EHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCCc-CHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 8999999964 9999998654 689999999999999999999999 9999999999999999877776 999
Q ss_pred cccccccCCCCC-------------------CcccccCCcccccCcccc-CCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 043388 704 LSHQLDSASKTP-------------------SSSIGIKGTVGYVAPEYG-MGSEASMTGDVYSFGILLLEMFTGRRPTD 762 (854)
Q Consensus 704 ~~~~~~~~~~~~-------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDv~slGvvl~elltg~~pf~ 762 (854)
+++......... ......+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 998875432210 112346799999999986 55669999999999999999998666554
No 145
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=358.79 Aligned_cols=289 Identities=23% Similarity=0.323 Sum_probs=203.8
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHH--HHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEA--LRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+.||+|+||.||+|++ +++.||||+++... ...+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999987 47899999997543 2344455555 44579999999998776544444556
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC------CCCeEeecCCCCceEecCCccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------QPPIVHGDLKPSNVLLDHDMVA 698 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~ 698 (854)
.++||||+++|+|.+++... ..++..+..++.||+.||+|||+.+ .++|+||||||+||+++.++..
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhc-------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 79999999999999999765 4588899999999999999999873 3389999999999999998777
Q ss_pred cc-ccccccccccCCCC-----CCcccccCCcccccCccccCC-------CCCCccchhHHHHHHHHHHHhCCCCCCCcc
Q 043388 699 HQ-NFSLSHQLDSASKT-----PSSSIGIKGTVGYVAPEYGMG-------SEASMTGDVYSFGILLLEMFTGRRPTDAAF 765 (854)
Q Consensus 699 ~~-Dfg~~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~slGvvl~elltg~~pf~~~~ 765 (854)
++ |||+++........ ........||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 76 99999877543221 112223569999999999887 456789999999999999999977765432
Q ss_pred cCCchHhHHhhhcCCcccccccCchhhHHHhhccchhh--HhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHH
Q 043388 766 TEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQ--EDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLC 843 (854)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 843 (854)
........+......... ..............+ +........++..+.+++.+||+.||++|||++|+++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPT-----FEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCCTTHHHHCSSCC-----HHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCch-----HHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 211100000000000000 000000000000000 0000011234667999999999999999999999999999
Q ss_pred hhhhhhhcC
Q 043388 844 HTRETFLGR 852 (854)
Q Consensus 844 ~~~~~~~~~ 852 (854)
++.+.+.+.
T Consensus 315 ~ll~~~~~~ 323 (336)
T 3g2f_A 315 ELMMIWERN 323 (336)
T ss_dssp HHHHCCCC-
T ss_pred HHHHHHHhc
Confidence 999887654
No 146
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=346.38 Aligned_cols=244 Identities=22% Similarity=0.245 Sum_probs=192.3
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++|++.++||+|+||+||+|++..+++.||||++..... .......+|+..+.++ +||||++++++|.+.+ .
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~-----~ 131 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG-----I 131 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC-----E
Confidence 689999999999999999999998999999999864332 2234556666666666 8999999999997655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+ +++|.+++..... .+++.+++.|+.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 132 LYLQTELC-GPSLQQHCEAWGA-----SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp EEEEEECC-CCBHHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred EEEEEecc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 89999999 6699999877542 689999999999999999999999 9999999999999998887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
++......... ....||+.|+|||++.+ .++.++|||||||++|||++|..|+.... ..........+
T Consensus 203 ~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~~~~~--- 270 (311)
T 3p1a_A 203 LLVELGTAGAG----EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLRQGYLP--- 270 (311)
T ss_dssp TCEECC----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHHHTTTCCC---
T ss_pred eeeecccCCCC----cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHhccCCC---
Confidence 99877544322 22459999999999876 78999999999999999999977765321 11111111000
Q ss_pred ccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 784 IEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 784 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 271 -----~~------------------~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 -----PE------------------FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp -----HH------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----cc------------------cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00 11122566889999999999999999999986
No 147
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=352.33 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=199.4
Q ss_pred hhccccCccCCCcceEEEEeEECCC----ceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGE----EMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.+|...+.||+|+||.||+|.+..+ +..||||+++.... .....+.+|++++++++||||+++++++...+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 4677889999999999999988643 35699999975432 33457889999999999999999999987654
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 120 -~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 120 -PMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp -SEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred -CcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 68999999999999999986532 689999999999999999999999 9999999999999998877766 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
||.+.................+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~ 268 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGFR 268 (333)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCC
T ss_pred CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCCc
Confidence 9999887654332222223457889999999998899999999999999999999 99999753211 11111111000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
. +....++..+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 269 ~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 269 L--------------------------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp C--------------------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred C--------------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 0 0011224568899999999999999999999999999876543
No 148
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.9e-39 Score=347.18 Aligned_cols=266 Identities=20% Similarity=0.267 Sum_probs=199.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
..+|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----- 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----
Confidence 468999999999999999999998899999999997532 234567889999999999999999999998755
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCCHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 689999999999999999753211 12689999999999999999999999 9999999999999998877766 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|++.......... ....|++.|+|||++.+..++.++|||||||++|||++|+.||................ ..
T Consensus 181 g~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~ 254 (310)
T 2wqm_A 181 GLGRFFSSKTTAA---HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ---CD 254 (310)
T ss_dssp ---------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT---TC
T ss_pred cceeeecCCCccc---cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc---cc
Confidence 9998765433221 22468999999999999899999999999999999999999997542221111111111 00
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
..... ...++..+.+++.+||+.||++|||+.||++.|+++.+...
T Consensus 255 ~~~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 255 YPPLP----------------------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp SCCCC----------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CCCCc----------------------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 00000 01124568899999999999999999999999999987653
No 149
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=356.92 Aligned_cols=271 Identities=18% Similarity=0.234 Sum_probs=200.4
Q ss_pred hhccccCccCCCcceEEEEeEECC---CceEEEEEEeeccccc-----------chHHHHHHHHHHHhccCCCeeeEEEE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLKQKG-----------AFRSFVAECEALRNIRHRNLIKIITI 613 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~ 613 (854)
++|.+.+.||+|+||.||+|.+.. ++..||+|+....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 579999999999999999999986 7889999998754321 12346678889999999999999999
Q ss_pred eeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec
Q 043388 614 CSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 693 (854)
Q Consensus 614 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 693 (854)
+.... .+....++||||+ +++|.+++.... .+++.+++.|+.||+.||+|||+. +|+||||||+||+++
T Consensus 117 ~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEF-KGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEES-SSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccc-CCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 87732 2233789999999 999999998654 789999999999999999999999 999999999999998
Q ss_pred CCc--cccc-ccccccccccCCCC----CCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCccc
Q 043388 694 HDM--VAHQ-NFSLSHQLDSASKT----PSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFT 766 (854)
Q Consensus 694 ~~~--~~~~-Dfg~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~ 766 (854)
.++ ..++ |||+++.+...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 265 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK 265 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 765 5554 99999877543221 1112345799999999999998999999999999999999999999964322
Q ss_pred CCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhh
Q 043388 767 EGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTR 846 (854)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 846 (854)
............ ...+.+... . ......++..+.+++..||+.||++|||+.+|++.|++..
T Consensus 266 ~~~~~~~~~~~~-----~~~~~~~~~-~------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 266 DPVAVQTAKTNL-----LDELPQSVL-K------------WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp CHHHHHHHHHHH-----HHTTTHHHH-H------------HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred ccHHHHHHHHhh-----cccccHHHH-h------------hccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 211111111100 000000000 0 0000023567899999999999999999999999998765
Q ss_pred h
Q 043388 847 E 847 (854)
Q Consensus 847 ~ 847 (854)
.
T Consensus 328 ~ 328 (345)
T 2v62_A 328 I 328 (345)
T ss_dssp C
T ss_pred C
Confidence 3
No 150
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.5e-39 Score=345.99 Aligned_cols=265 Identities=24% Similarity=0.407 Sum_probs=205.2
Q ss_pred hhccccCccCCCcceEEEEeEECCC---ceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGE---EMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.+|.+.++||+|+||.||+|++..+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----G 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS----S
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC----C
Confidence 4688899999999999999997533 3468999986533 334567899999999999999999999975543 2
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++..++ ||
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSC
T ss_pred ceEEEEeCCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcc
Confidence 57899999999999999976432 678999999999999999999999 9999999999999999877666 99
Q ss_pred ccccccccCCCC-CCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 703 SLSHQLDSASKT-PSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 703 g~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|.++........ ........||+.|+|||.+.+..++.++||||+||++|||++ |.+||....... ..........
T Consensus 173 g~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~~~~~~- 250 (298)
T 3f66_A 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRR- 250 (298)
T ss_dssp GGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHHHTTCC-
T ss_pred cccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHHhcCCC-
Confidence 999876543321 122233568889999999998899999999999999999999 555655432221 1111111110
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhcC
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLGR 852 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 852 (854)
. .. ...++..+.+++.+||+.||++|||+.|+++.|+++...+.++
T Consensus 251 ~-----~~---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~~ 296 (298)
T 3f66_A 251 L-----LQ---------------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 296 (298)
T ss_dssp C-----CC---------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCCS
T ss_pred C-----CC---------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccC
Confidence 0 00 0112445789999999999999999999999999999887765
No 151
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-39 Score=341.98 Aligned_cols=262 Identities=21% Similarity=0.339 Sum_probs=208.0
Q ss_pred hhccccC-ccCCCcceEEEEeEEC--CCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSN-MIGQGSFGSVYKGILG--GEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
++|.+.+ .||+|+||.||+|.+. .++..||+|+++... ....+.+.+|++++++++||||+++++++.. +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~----- 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E----- 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-S-----
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-C-----
Confidence 4566666 9999999999999864 467889999997643 3345678999999999999999999999843 2
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred CcEEEEEeCCCCCHHHHHHhCCc-----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 47999999999999999975432 689999999999999999999999 9999999999999998876665 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|.+.................||+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+......
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~~ 232 (287)
T 1u59_A 155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRM 232 (287)
T ss_dssp TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCCC
T ss_pred cceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCcC
Confidence 999887654432222233457899999999988889999999999999999999 99999754221 111111111000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
. ....++..+.+++..||+.||++|||+.|+++.|+++..+..+
T Consensus 233 ~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 233 E--------------------------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp C--------------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred C--------------------------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 0 0112255688999999999999999999999999999876543
No 152
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-39 Score=342.71 Aligned_cols=248 Identities=23% Similarity=0.370 Sum_probs=199.8
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
+.++|++.+.||+|+||.||+|.+..++..||+|++.... ......+.+|+.++++++||||+++++++.+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 82 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT---- 82 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC----
Confidence 3578999999999999999999999999999999996432 233567889999999999999999999997655
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 83 -~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 83 -RVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp -EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECS
T ss_pred -EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEe
Confidence 6899999999999999998764 689999999999999999999999 9999999999999998877776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||++........ ....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... ..........
T Consensus 153 fg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-- 224 (279)
T 3fdn_A 153 FGWSVHAPSSRR-----TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISRVEF-- 224 (279)
T ss_dssp CCEESCC-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCC--
T ss_pred ccccccCCcccc-----cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-HHHHHHhCCC--
Confidence 999865544322 22468999999999999899999999999999999999999997532110 0011100000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.. ...++..+.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 TF--------------------------PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CC--------------------------CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CC--------------------------CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 01124457789999999999999999999874
No 153
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.6e-39 Score=347.23 Aligned_cols=270 Identities=22% Similarity=0.277 Sum_probs=197.8
Q ss_pred hhcccc-CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASS-NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
+.|.+. +.||+|+||.||+|++..+++.||||+++.......+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~-----~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED-----RF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-----EE
Confidence 467774 7899999999999999889999999999876666678899999999995 7999999999997755 78
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----ccccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAHQN 701 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~~~D 701 (854)
++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++ ++++|
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred EEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEE
Confidence 99999999999999998754 689999999999999999999999 999999999999998765 34459
Q ss_pred cccccccccCCCC----CCcccccCCcccccCccccCC-----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHh
Q 043388 702 FSLSHQLDSASKT----PSSSIGIKGTVGYVAPEYGMG-----SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLH 772 (854)
Q Consensus 702 fg~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~ 772 (854)
||++......... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 237 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237 (316)
T ss_dssp TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-
T ss_pred ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccc
Confidence 9998876432211 111223469999999999865 4588999999999999999999999986533221100
Q ss_pred HHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 773 EFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 773 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.. ... ..........+.......+. .....++..+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~---~~~----~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 238 RG---EAC----PACQNMLFESIQEGKYEFPD---KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp ------CC----HHHHHHHHHHHHHCCCCCCH---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cc---ccc----hhHHHHHHHHHhccCcccCc---hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00 000 00000000000000000000 0111235668899999999999999999999873
No 154
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-39 Score=351.91 Aligned_cols=266 Identities=22% Similarity=0.260 Sum_probs=202.0
Q ss_pred HHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc-----cccchHHHHHHHHHHHhccCCCeeeEEEEeecc
Q 043388 543 LSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK-----QKGAFRSFVAECEALRNIRHRNLIKIITICSSI 617 (854)
Q Consensus 543 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 617 (854)
+....++|.+.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 455678999999999999999999999999999999999643 234567899999999999999999999999765
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCc----------------------------------ccccccCHHHHHHHHH
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDH----------------------------------LEVCKLTLIQRVNIAI 663 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------------------------~~~~~~~~~~~~~i~~ 663 (854)
+ ..++||||+++|+|.+++...... .....+++..++.|+.
T Consensus 101 ~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 101 Q-----YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp S-----EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred C-----eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 5 789999999999999999632100 0012356778889999
Q ss_pred HHHHHHHHHHhcCCCCeEeecCCCCceEecCCc--ccc-cccccccccccCCCCC-CcccccCCcccccCccccCC--CC
Q 043388 664 DVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--VAH-QNFSLSHQLDSASKTP-SSSIGIKGTVGYVAPEYGMG--SE 737 (854)
Q Consensus 664 ~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~~-~Dfg~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~ 737 (854)
|++.||+|||+. +|+||||||+||+++.++ ..+ +|||.+..+....... .......||+.|+|||++.+ ..
T Consensus 176 qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 252 (345)
T 3hko_A 176 QIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252 (345)
T ss_dssp HHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC
T ss_pred HHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC
Confidence 999999999999 999999999999998765 444 5999998765432211 11223569999999999875 67
Q ss_pred CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHH
Q 043388 738 ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAI 817 (854)
Q Consensus 738 ~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 817 (854)
++.++|||||||++|||++|+.||....... ............ ..+ ....++..+
T Consensus 253 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~-----~~~-------------------~~~~~~~~~ 307 (345)
T 3hko_A 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCF-----ENP-------------------NYNVLSPLA 307 (345)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCT-----TSG-------------------GGGGSCHHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhccccc-----CCc-------------------ccccCCHHH
Confidence 8999999999999999999999997543221 111111111000 000 011124567
Q ss_pred HHHhhcccCCCCCCCCCHHHHHHH
Q 043388 818 TRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 818 ~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.+++.+||+.||.+|||+.|+++.
T Consensus 308 ~~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 308 RDLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHHcCCChhHCCCHHHHhcC
Confidence 899999999999999999999873
No 155
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.2e-40 Score=352.53 Aligned_cols=277 Identities=25% Similarity=0.360 Sum_probs=209.5
Q ss_pred hccccCccCCCcceEEEEeEE----CCCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 549 EFASSNMIGQGSFGSVYKGIL----GGEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.|++.+.||+|+||.||++.+ ..+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~ 108 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG---AA 108 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT---TT
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC---Cc
Confidence 349999999999999988765 34788999999975432 33567899999999999999999999997643 23
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~-------~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 178 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPRH-------SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDF 178 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGGS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred eEEEEEecccCCcHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCc
Confidence 689999999999999999764 578999999999999999999999 9999999999999999886666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|.+.................||..|+|||++.+..++.++|||||||++|||++|+.||....... .... .....
T Consensus 179 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~~--~~~~~ 253 (318)
T 3lxp_A 179 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LELI--GIAQG 253 (318)
T ss_dssp GGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHHH--CSCCH
T ss_pred cccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hhhh--ccccc
Confidence 999887654432222233468899999999998889999999999999999999999987432110 0000 00000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
.... ... ..... ...+......++..+.+++.+||+.||++|||+.|+++.|+.+.+++.+
T Consensus 254 ~~~~--~~~-~~~~~-----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 254 QMTV--LRL-TELLE-----RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHH--HHH-HHHHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred chhH--HHH-HHHHh-----cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 0000 000 00000 0001111223456789999999999999999999999999999988764
No 156
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=344.47 Aligned_cols=266 Identities=23% Similarity=0.370 Sum_probs=206.8
Q ss_pred hccccCccCCCcceEEEEeEECCC---ceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGE---EMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.|...++||+|+||.||+|++..+ +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+. .
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG----L 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS----C
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC----C
Confidence 466679999999999999997543 34799999865332 345678999999999999999999999876442 3
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+.+|+|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQR-----NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred cEEEEecccCCCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 5899999999999999986432 678999999999999999999999 9999999999999999876666 999
Q ss_pred cccccccCCC-CCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 704 LSHQLDSASK-TPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 704 ~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
.++....... .........+|+.|+|||.+.+..++.++|||||||++|||++|..|+...... ..............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~ 248 (298)
T 3pls_A 170 LARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLP 248 (298)
T ss_dssp SSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCC
T ss_pred CcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCC
Confidence 9986644321 111222346899999999999999999999999999999999966655432221 11222211111000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhcCC
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLGRR 853 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 853 (854)
. ...++..+.+++.+||+.||.+|||+.|+++.|+++.+.+.+..
T Consensus 249 ~--------------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 249 Q--------------------------PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp C--------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred C--------------------------CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 0 01124557899999999999999999999999999998876643
No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.1e-39 Score=366.70 Aligned_cols=277 Identities=17% Similarity=0.202 Sum_probs=198.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc--cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 623 (854)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+++.+|+.+++.++||||+++++++..... ....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999753 23345678899999999999999999999876542 2234
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..|+||||+++ ++.+.+.. .+++.++..++.||+.||+|||+. +|+||||||+|||++.++..++ ||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 67999999976 56666643 478899999999999999999999 9999999999999999877776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC--
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP-- 780 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~-- 780 (854)
|+++....... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+.... ..+..+......
T Consensus 209 G~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 209 GLARTAGTSFM----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPC 283 (464)
T ss_dssp CCC-----CCC----C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCC
T ss_pred EeeeecCCCcc----cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCC
Confidence 99987654322 22357999999999999999999999999999999999999999764321 111111111110
Q ss_pred cccccccCchhhHHHhhcc-----chhh--------HhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANN-----SMIQ--------EDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~-----~~~~--------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
......+.+.... +.... ...+ .............+.+++.+||+.||++|||++|+++.
T Consensus 284 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVRN-YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHHH-HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhhh-HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0011111111100 00000 0000 00011112235678899999999999999999999863
No 158
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-40 Score=357.68 Aligned_cols=265 Identities=23% Similarity=0.425 Sum_probs=197.8
Q ss_pred hhccccCccCCCcceEEEEeEECC---CceEEEEEEeecc-cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
..|.+.+.||+|+||.||+|++.. .+..||+|.++.. .....+.+.+|+.++++++||||++++++|...+ .
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----~ 164 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----G 164 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS----S
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC----C
Confidence 357778899999999999998742 2357899998643 3344578999999999999999999999875433 2
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++..... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 165 ~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DF 236 (373)
T 3c1x_A 165 SPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADF 236 (373)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred CeEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeec
Confidence 57899999999999999976542 578999999999999999999999 9999999999999999877776 99
Q ss_pred ccccccccCCCCC-CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 703 SLSHQLDSASKTP-SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 703 g~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|+++......... .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||....... ..........
T Consensus 237 G~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~~ 314 (373)
T 3c1x_A 237 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRR 314 (373)
T ss_dssp ---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTCC
T ss_pred cccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCCC
Confidence 9998765432211 12223457889999999998899999999999999999999 677776543221 1111111000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhcC
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLGR 852 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 852 (854)
... ...++..+.+++.+||+.||++|||+.|+++.|+++...+.+.
T Consensus 315 -----~~~---------------------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 315 -----LLQ---------------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp -----CCC---------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -----CCC---------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 000 1112456889999999999999999999999999998877654
No 159
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-39 Score=364.14 Aligned_cols=247 Identities=26% Similarity=0.378 Sum_probs=202.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----- 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS----- 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----
Confidence 368999999999999999999999899999999996432 234567899999999999999999999997755
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 90 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 DIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp EEEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 6899999999999999998654 689999999999999999999999 9999999999999998877666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|++......... ...+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ............
T Consensus 161 G~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~- 234 (476)
T 2y94_A 161 GLSNMMSDGEFL----RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFKKICDGIFY- 234 (476)
T ss_dssp SSCEECCTTCCB----CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-HHHHHHHTTCCC-
T ss_pred cchhhccccccc----cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-HHHHHHhcCCcC-
Confidence 999877543321 23469999999999988765 78999999999999999999999753211 111111111000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.| ..+...+.+++.+||+.||++|||+.|+++
T Consensus 235 ------~p---------------------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 ------TP---------------------QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp ------CC---------------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------CC---------------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00 011345778999999999999999999987
No 160
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.8e-39 Score=355.19 Aligned_cols=282 Identities=20% Similarity=0.224 Sum_probs=207.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
..+|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 358999999999999999999999899999999997433 2334678899999999999999999999976654444568
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++ +|.+++... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||.
T Consensus 106 ~iv~e~~~~-~L~~~l~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ-------HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEcccCc-CHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 999999975 999998753 588999999999999999999999 9999999999999999876666 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC--c
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP--E 781 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~--~ 781 (854)
+.................||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .+......... .
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 253 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQ 253 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCH
Confidence 98876554433333345799999999986654 48999999999999999999999997653221 12222211111 0
Q ss_pred -ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 -KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 -~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.+....+........................+...+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01111110000000000000000000011123456889999999999999999999986
No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.4e-39 Score=362.03 Aligned_cols=253 Identities=23% Similarity=0.277 Sum_probs=192.9
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--------ccchHHHHHHHHHHHhccCCCeeeEEEEeecc
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--------KGAFRSFVAECEALRNIRHRNLIKIITICSSI 617 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 617 (854)
..++|.+.+.||+|+||.||+|.+..+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4578999999999999999999999999999999997432 11223578999999999999999999997542
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc-
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM- 696 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 696 (854)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 213 ------~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 213 ------DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp ------EEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSS
T ss_pred ------ceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCC
Confidence 4689999999999999987654 689999999999999999999999 999999999999997543
Q ss_pred ---ccccccccccccccCCCCCCcccccCCcccccCccccCC---CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch
Q 043388 697 ---VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG---SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT 770 (854)
Q Consensus 697 ---~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~ 770 (854)
++++|||+++........ ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 278 ~~~~kl~DFG~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~ 353 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGETSLM----RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 353 (419)
T ss_dssp SCCEEECCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCH
T ss_pred cceEEEeecccceecCCCccc----cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHH
Confidence 344599999877543222 23569999999999864 56888999999999999999999999754332222
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
........... .+ .....++..+.+++.+||+.||++|||+.|+++.
T Consensus 354 ~~~i~~~~~~~------~~------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 354 KDQITSGKYNF------IP------------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHHHTTCCCC------CH------------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhcCCCCC------Cc------------------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 22211111100 00 0111225568899999999999999999999863
No 162
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.7e-39 Score=342.29 Aligned_cols=258 Identities=19% Similarity=0.331 Sum_probs=202.7
Q ss_pred HhhccccCccCCCcceEEEEeEECC---CceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.+.||+|+||.||+|++.. ++..||+|+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 85 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE----- 85 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----
Confidence 4689999999999999999998643 45679999997542 23456789999999999999999999998643
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 86 -~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 86 -PTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECC
T ss_pred -CCEEEEecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCc
Confidence 35899999999999999986542 589999999999999999999999 9999999999999998876666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
||.+.......... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...........
T Consensus 157 fg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~ 232 (281)
T 3cc6_A 157 FGLSRYIEDEDYYK--ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDR 232 (281)
T ss_dssp CCGGGCC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCC
T ss_pred cCCCcccccccccc--cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCC
Confidence 99998775533221 122357889999999988889999999999999999998 99999754222 11111111100
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
.. ....++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 233 ~~--------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 233 LP--------------------------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp CC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC--------------------------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 00 0011245578999999999999999999999999988754
No 163
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=351.86 Aligned_cols=277 Identities=20% Similarity=0.257 Sum_probs=197.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc--chHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..+++.||+|++...... ..+.+.+|++++++++||||+++++++...+ .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~ 76 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-----R 76 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-----e
Confidence 35799999999999999999999989999999998654322 2456789999999999999999999997655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 77 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 77 LHLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp EEEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 899999999999999887654 689999999999999999999999 9999999999999998887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc--CC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT--LP 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~~ 780 (854)
.+.......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ........ ..
T Consensus 148 ~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~ 223 (311)
T 4agu_A 148 FARLLTGPSDYY---DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLI 223 (311)
T ss_dssp TCEECC---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCC
T ss_pred CchhccCccccc---CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccc
Confidence 998776433222 12468999999999876 5689999999999999999999999976432211 11111100 00
Q ss_pred ccccccc-CchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIV-DPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
....... .........................++..+.+++.+||+.||++|||++|+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 000000000000000000000112235568899999999999999999999863
No 164
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-39 Score=352.01 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=197.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
...|...+.||+|+||.||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 127 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH----- 127 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----
Confidence 3569999999999999999999988999999999975432 23457889999999999999999999997755
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||++ |++.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 128 ~~~lv~e~~~-g~l~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 198 (348)
T 1u5q_A 128 TAWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDF 198 (348)
T ss_dssp EEEEEEECCS-EEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCC
T ss_pred eEEEEEecCC-CCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeec
Confidence 7899999997 588888865432 689999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM---GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
|++....... ...||+.|+|||++. +..++.++|||||||++|||++|+.||....... ..........
T Consensus 199 G~a~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~ 270 (348)
T 1u5q_A 199 GSASIMAPAN-------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNES 270 (348)
T ss_dssp TTCBSSSSBC-------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCC
T ss_pred cCceecCCCC-------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCC
Confidence 9998764322 246999999999874 5678999999999999999999999997532111 1111111110
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
+. ... ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 271 ~~----~~~----------------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 271 PA----LQS----------------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp CC----CCC----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CC----CCC----------------------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 000 1114457789999999999999999999753
No 165
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-40 Score=361.67 Aligned_cols=261 Identities=22% Similarity=0.271 Sum_probs=203.8
Q ss_pred HHHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeec
Q 043388 540 YAELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSS 616 (854)
Q Consensus 540 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 616 (854)
+.+.....++|++.++||+|+||.||+|+.+.+++.||||+++.. .....+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344445568999999999999999999999989999999999643 22234567899999999999999999999977
Q ss_pred cCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc
Q 043388 617 IDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 696 (854)
Q Consensus 617 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 696 (854)
.+ ..|+||||+++|+|.+++...+. .+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 133 ~~-----~~~lVmE~~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g 199 (412)
T 2vd5_A 133 EN-----YLYLVMEYYVGGDLLTLLSKFGE-----RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCG 199 (412)
T ss_dssp SS-----EEEEEECCCCSCBHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred CC-----EEEEEEcCCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCC
Confidence 65 78999999999999999986532 689999999999999999999999 999999999999999988
Q ss_pred cccc-ccccccccccCCCCCCcccccCCcccccCccccC-------CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC
Q 043388 697 VAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM-------GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG 768 (854)
Q Consensus 697 ~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~ 768 (854)
..++ |||+++........ .....+||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 200 ~vkL~DFGla~~~~~~~~~--~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~- 276 (412)
T 2vd5_A 200 HIRLADFGSCLKLRADGTV--RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA- 276 (412)
T ss_dssp CEEECCCTTCEECCTTSCE--ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-
T ss_pred CEEEeechhheeccCCCcc--ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-
Confidence 7776 99999877543321 122357999999999987 456899999999999999999999999754221
Q ss_pred chHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCC---CCHHHHHH
Q 043388 769 LTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFER---MEMRDVVA 840 (854)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~evl~ 840 (854)
.....+..... .. .-|. ....++.++.+++.+||. +|++| |+++|+++
T Consensus 277 ~~~~~i~~~~~--~~---~~p~------------------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 277 ETYGKIVHYKE--HL---SLPL------------------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHHTHHH--HC---CCC----------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHHhccc--Cc---CCCc------------------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 11111111000 00 0000 001224567899999999 99998 58888865
No 166
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=7.4e-39 Score=347.84 Aligned_cols=275 Identities=24% Similarity=0.332 Sum_probs=211.7
Q ss_pred HHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHh--ccCCCeeeEEEEeeccCC
Q 043388 542 ELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKIITICSSIDS 619 (854)
Q Consensus 542 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~ 619 (854)
.-....++|.+.+.||+|+||.||+|++. ++.||||++... ..+.+.+|++++.. ++||||+++++++.....
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 33445679999999999999999999984 789999999643 24667889999988 699999999999876542
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeecCCCCceE
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--------HHCQPPIVHGDLKPSNVL 691 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIl 691 (854)
.....++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+||+
T Consensus 111 -~~~~~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIl 179 (342)
T 1b6c_B 111 -TWTQLWLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNIL 179 (342)
T ss_dssp -SCCCEEEEECCCTTCBHHHHHHHC-------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEE
T ss_pred -ccceeEEEEeecCCCcHHHHHhcc-------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEE
Confidence 223579999999999999999753 5889999999999999999999 67 9999999999999
Q ss_pred ecCCccccc-ccccccccccCCCCCC-cccccCCcccccCccccCCC------CCCccchhHHHHHHHHHHHhC------
Q 043388 692 LDHDMVAHQ-NFSLSHQLDSASKTPS-SSIGIKGTVGYVAPEYGMGS------EASMTGDVYSFGILLLEMFTG------ 757 (854)
Q Consensus 692 l~~~~~~~~-Dfg~~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvvl~elltg------ 757 (854)
++.++..++ |||++........... ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 180 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 259 (342)
T 1b6c_B 180 VKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259 (342)
T ss_dssp ECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred ECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence 998877776 9999987765432210 12234699999999998775 234789999999999999999
Q ss_pred ----CCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 043388 758 ----RRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM 833 (854)
Q Consensus 758 ----~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 833 (854)
+.||............+............+... ....+++..+.+++.+||+.||++||
T Consensus 260 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~dp~~Rp 322 (342)
T 1b6c_B 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNR-----------------WQSCEALRVMAKIMRECWYANGAARL 322 (342)
T ss_dssp CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG-----------------GGTSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred ccccccCccccCcCcccHHHHHHHHHHHHhCCCCccc-----------------ccchhHHHHHHHHHHHHhccChhhCC
Confidence 677765443333333333222111111111100 01124467799999999999999999
Q ss_pred CHHHHHHHHHhhhhhh
Q 043388 834 EMRDVVAKLCHTRETF 849 (854)
Q Consensus 834 s~~evl~~L~~~~~~~ 849 (854)
|+.||++.|+++.+..
T Consensus 323 s~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 323 TALRIKKTLSQLSQQE 338 (342)
T ss_dssp CHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 167
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-39 Score=338.78 Aligned_cols=256 Identities=26% Similarity=0.395 Sum_probs=206.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
++|.+.+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 80 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PICL 80 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SCEE
T ss_pred hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CeEE
Confidence 57999999999999999999997 677899999975543 3467899999999999999999999987654 5799
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccc
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSH 706 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~ 706 (854)
||||+++++|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+.
T Consensus 81 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 152 (267)
T 3t9t_A 81 VTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTR 152 (267)
T ss_dssp EECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGG
T ss_pred EEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccc
Confidence 9999999999999986532 688999999999999999999999 9999999999999998877666 999998
Q ss_pred ccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 707 QLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 707 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
........ ......+|..|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+......
T Consensus 153 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~~~---- 224 (267)
T 3t9t_A 153 FVLDDQYT--SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRL---- 224 (267)
T ss_dssp GBCCHHHH--STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCC----
T ss_pred cccccccc--ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCCcC----
Confidence 76432211 1122357889999999988889999999999999999999 89998753211 111111110000
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
..+ ..++..+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 225 -~~~---------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 225 -YKP---------------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -CCC---------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -CCC---------------------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 000 01144578999999999999999999999999998764
No 168
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.3e-39 Score=352.17 Aligned_cols=270 Identities=21% Similarity=0.321 Sum_probs=211.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCc-----eEEEEEEeecccc-cchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEE-----MIVAVKVINLKQK-GAFRSFVAECEALRNI-RHRNLIKIITICSSIDS 619 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 619 (854)
.++|.+.+.||+|+||.||+|.+..++ ..||+|+++.... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG- 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC-
Confidence 468999999999999999999997655 3799999975432 3456789999999999 8999999999997655
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcc--------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceE
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHL--------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVL 691 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIl 691 (854)
..++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||+. +|+||||||+||+
T Consensus 124 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 124 ----PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ----ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 6799999999999999998643110 012578999999999999999999999 9999999999999
Q ss_pred ecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCc
Q 043388 692 LDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGL 769 (854)
Q Consensus 692 l~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~ 769 (854)
++.++..++ |||++.......... ......||+.|+|||++.+..++.++|||||||++|||+| |..||.......
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~- 274 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS- 274 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSE-ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-
T ss_pred ECCCCeEEECcccccccccccccee-ecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-
Confidence 998887766 999998765443221 1122347889999999988889999999999999999999 999997543221
Q ss_pred hHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 770 TLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
............. . ...++..+.+++..||+.||.+|||+.|+++.|+++.+..
T Consensus 275 ~~~~~~~~~~~~~-----~---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 275 KFYKLVKDGYQMA-----Q---------------------PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHHHHTCCCC-----C---------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCC-----C---------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1122221111100 0 0111455788999999999999999999999999988766
Q ss_pred hcC
Q 043388 850 LGR 852 (854)
Q Consensus 850 ~~~ 852 (854)
..+
T Consensus 329 ~~~ 331 (333)
T 2i1m_A 329 RRE 331 (333)
T ss_dssp HHH
T ss_pred hcc
Confidence 543
No 169
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-39 Score=341.07 Aligned_cols=250 Identities=22% Similarity=0.336 Sum_probs=197.5
Q ss_pred hccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.|.+.+.||+|+||.||+|.+..++..||+|++.... ....+.+.+|+.++++++||||+++++++..... +....+
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~~~~~ 105 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK-GKKCIV 105 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS-SCEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC-CCceEE
Confidence 4788889999999999999999999999999997543 3345678999999999999999999999875432 234689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCceEec-CCccccc-cc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--IVHGDLKPSNVLLD-HDMVAHQ-NF 702 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~~~-Df 702 (854)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. + |+||||||+||+++ .++..++ ||
T Consensus 106 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Df 176 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCT
T ss_pred EEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeC
Confidence 9999999999999998754 688999999999999999999999 7 99999999999997 5555555 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..................+..
T Consensus 177 g~~~~~~~~~~-----~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 250 (290)
T 1t4h_A 177 GLATLKRASFA-----KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS 250 (290)
T ss_dssp TGGGGCCTTSB-----EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGG
T ss_pred CCccccccccc-----ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccc
Confidence 99975543322 22469999999998764 5899999999999999999999999754322111111111100000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. ...++..+.+++..||+.||.+|||+.|+++
T Consensus 251 ~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 251 F--------------------------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G--------------------------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c--------------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0 0011345789999999999999999999986
No 170
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.4e-39 Score=356.39 Aligned_cols=254 Identities=18% Similarity=0.261 Sum_probs=191.6
Q ss_pred Hhhcccc-CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASS-NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+. ++||+|+||.||+|.+..+++.||||+++.. ..+.+|++++.++ +||||+++++++.... .+..+
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY-AGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecc-cCCcE
Confidence 4567776 7899999999999999999999999998632 4677899887554 8999999999986522 12236
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---Cccccc-
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHQ- 700 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~~~- 700 (854)
.|+||||+++|+|.+++..... ..+++.++..|+.||+.||+|||+. +|+||||||+||+++. ++..++
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 8999999999999999987532 2689999999999999999999999 9999999999999987 455555
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc---hHhHHhhh
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGL---TLHEFVKM 777 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~---~~~~~~~~ 777 (854)
|||+++....... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........
T Consensus 207 DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~ 282 (400)
T 1nxk_A 207 DFGFAKETTSHNS----LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282 (400)
T ss_dssp CCTTCEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHT
T ss_pred ecccccccCCCCc----cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcC
Confidence 9999987654322 1234689999999999999999999999999999999999999976432211 11111111
Q ss_pred cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 778 TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 778 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
... ...+ ....++.++.+++.+||+.||++|||+.|+++.
T Consensus 283 ~~~-----~~~~-------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 QYE-----FPNP-------------------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCC-----CCTT-------------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc-----CCCc-------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000 001224567899999999999999999999874
No 171
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=350.69 Aligned_cols=258 Identities=22% Similarity=0.364 Sum_probs=199.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceE----EEEEEeecc-cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMI----VAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.+|++.++||+|+||.||+|++..+++. ||+|.+... .....+.+.+|+.++++++||||+++++++....
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---- 90 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST---- 90 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS----
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC----
Confidence 5799999999999999999999777664 466666433 3345678999999999999999999999987543
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
.++||||+++|+|.+++..... .+++..++.|+.|++.||+|||++ +|+||||||+||+++.++..++ |
T Consensus 91 --~~~v~~~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 91 --VQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp --EEEEECCCSSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred --ceEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEcc
Confidence 6899999999999999987543 689999999999999999999999 9999999999999998877666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
||+++.......... .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...... ...........
T Consensus 161 fG~a~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~ 237 (327)
T 3lzb_A 161 FGLAKLLGAEEKEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGER 237 (327)
T ss_dssp TTC-----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCC
T ss_pred CcceeEccCcccccc-ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC
Confidence 999987755433221 223457889999999999999999999999999999999 99999754322 12222211110
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
... ...++..+.+++.+||+.||.+|||+.|+++.|+++...
T Consensus 238 ~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 238 LPQ--------------------------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCC--------------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred CCC--------------------------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 000 011244578899999999999999999999999988754
No 172
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=351.79 Aligned_cols=244 Identities=22% Similarity=0.324 Sum_probs=201.4
Q ss_pred HHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--------cchHHHHHHHHHHHhccCCCeeeEEEEeec
Q 043388 545 KATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--------GAFRSFVAECEALRNIRHRNLIKIITICSS 616 (854)
Q Consensus 545 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 616 (854)
...++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++..
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~ 100 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN 100 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence 356789999999999999999999999999999999975431 123467789999999999999999999976
Q ss_pred cCCCCCceeeEEEeeccCC-CHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC
Q 043388 617 IDSKGADFKALVFEYMENG-SLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 695 (854)
Q Consensus 617 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 695 (854)
.+ ..++||||+.+| +|.+++.... .+++..+..|+.|++.||+|||+. +|+||||||+||+++.+
T Consensus 101 ~~-----~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 101 QG-----FFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAED 166 (335)
T ss_dssp SS-----EEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred CC-----EEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCC
Confidence 55 789999999777 9999998765 689999999999999999999999 99999999999999988
Q ss_pred ccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 696 MVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 696 ~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
+..++ |||.+......... ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......
T Consensus 167 ~~~kL~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------ 236 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGKLF----YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------ 236 (335)
T ss_dssp SCEEECCCTTCEECCTTCCB----CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------
T ss_pred CcEEEeecccceECCCCCce----eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------
Confidence 77766 99999877554322 23469999999999988776 88999999999999999999999742110
Q ss_pred HhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 774 FVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 774 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
...... .+. .++..+.+++.+||+.||++|||+.|+++.
T Consensus 237 -~~~~~~-------~~~---------------------~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 -VEAAIH-------PPY---------------------LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TTTCCC-------CSS---------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -HhhccC-------CCc---------------------ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 000 013457899999999999999999999874
No 173
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-39 Score=346.15 Aligned_cols=262 Identities=20% Similarity=0.241 Sum_probs=199.1
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
..++|.+.+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~---- 107 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG---- 107 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT----
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC----
Confidence 45789999999999999999999998999999999975432 22467889999999999999999999987755
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 108 -~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~D 177 (309)
T 2h34_A 108 -QLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVD 177 (309)
T ss_dssp -EEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred -eEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEec
Confidence 7899999999999999998754 689999999999999999999999 9999999999999998877766 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+.......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..........+.
T Consensus 178 fg~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~ 253 (309)
T 2h34_A 178 FGIASATTDEKLTQ--LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR 253 (309)
T ss_dssp CCC------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC
T ss_pred CccCcccccccccc--ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC
Confidence 99998765433221 12346899999999999989999999999999999999999999754221 111111111100
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-CHHHHHHHHHhhhhhh
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-EMRDVVAKLCHTRETF 849 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~~~~~ 849 (854)
. .. ....++..+.+++.+||+.||++|| |++++++.|++..+..
T Consensus 254 ~--~~----------------------~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 254 P--ST----------------------VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp G--GG----------------------TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred c--cc----------------------cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0 00 0112245578899999999999999 9999999999876544
No 174
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.1e-39 Score=339.28 Aligned_cols=252 Identities=20% Similarity=0.306 Sum_probs=202.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----F 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC-----E
Confidence 468999999999999999999999899999999997543 233467889999999999999999999997655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----cccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAHQ 700 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~~~ 700 (854)
.++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ ++++
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 899999999999999988754 689999999999999999999999 999999999999998654 3445
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||.+......... ....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... ............
T Consensus 151 Dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~ 225 (284)
T 3kk8_A 151 DFGLAIEVNDSEAW----HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYD 225 (284)
T ss_dssp CCTTCEECCSSCBC----CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC
T ss_pred eceeeEEcccCccc----cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhcccc
Confidence 99999876543322 2346999999999999999999999999999999999999999753211 111111111100
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ..+ ....++..+.+++.+||+.||++|||+.|+++.
T Consensus 226 ~-----~~~-------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 Y-----PSP-------------------EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp C-----CTT-------------------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred C-----Cch-------------------hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 000 001124557899999999999999999999873
No 175
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.1e-39 Score=357.01 Aligned_cols=251 Identities=22% Similarity=0.367 Sum_probs=193.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhcc--CCCeeeEEEEeeccCCCCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIR--HRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 623 (854)
.+|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.++++++ ||||+++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~----- 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ----- 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC-----
Confidence 45999999999999999999987 48899999997543 234567899999999996 599999999987755
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccccccc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQNFS 703 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~Dfg 703 (854)
..++||| +.+++|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++++.++++|||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~kl~DFG 199 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLIDFG 199 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEESSSCEEECCCS
T ss_pred EEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEECCeEEEEecC
Confidence 6899999 56789999998764 678889999999999999999999 9999999999999987666666999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-----------CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHh
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-----------SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLH 772 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~ 772 (854)
+++.+....... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+.
T Consensus 200 ~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~ 278 (390)
T 2zmd_A 200 IANQMQPDTTSV-VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 278 (390)
T ss_dssp SSCCC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred ccccccCCCccc-cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHH
Confidence 998775433211 1223569999999999865 3689999999999999999999999975422211111
Q ss_pred HHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 773 EFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 773 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
............. .+...+.+++.+||+.||.+|||+.|+++.
T Consensus 279 ~~~~~~~~~~~~~--------------------------~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIEFPD--------------------------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCCCCC--------------------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCCCCc--------------------------cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111111000000 013457789999999999999999999863
No 176
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.8e-40 Score=354.50 Aligned_cols=277 Identities=20% Similarity=0.290 Sum_probs=195.1
Q ss_pred HHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 543 LSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 543 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.....++|++.++||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH-- 106 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT--
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC--
Confidence 34456799999999999999999999999999999999964432 23456789999999999999999999998765
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC-----C
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-----D 695 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-----~ 695 (854)
..++||||+++ +|.+++.... .+++.+++.|+.||+.||+|||+. +|+||||||+||+++. +
T Consensus 107 ---~~~lv~e~~~~-~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 173 (329)
T 3gbz_A 107 ---RLHLIFEYAEN-DLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASET 173 (329)
T ss_dssp ---EEEEEEECCSE-EHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----C
T ss_pred ---EEEEEEecCCC-CHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCcc
Confidence 78999999985 9999998765 689999999999999999999999 9999999999999953 3
Q ss_pred cccc-cccccccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 696 MVAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 696 ~~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
...+ +|||.++......... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ....
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~ 249 (329)
T 3gbz_A 174 PVLKIGDFGLARAFGIPIRQF---THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFK 249 (329)
T ss_dssp CEEEECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred ceEEECcCCCccccCCccccc---CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHH
Confidence 3344 4999998775433222 224589999999998875 48999999999999999999999997643221 1111
Q ss_pred Hhhh-cCCcc--ccccc-CchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 774 FVKM-TLPEK--VIEIV-DPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 774 ~~~~-~~~~~--~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.... ..+.. +.... .+.+....... ............+..++.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 250 IFEVLGLPDDTTWPGVTALPDWKQSFPKF--RGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHCCCCTTTSTTGGGSTTCCTTCCCC--CCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhCCCchhhhhhhhhhhhhhhhhhhh--ccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1111 11100 00000 00000000000 0000000011113456789999999999999999999986
No 177
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.8e-41 Score=359.30 Aligned_cols=269 Identities=25% Similarity=0.352 Sum_probs=188.3
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHh--ccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRN--IRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
++|.+.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++..... .....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~ 76 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQL 76 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS-SSEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC-cccee
Confidence 57999999999999999999875 778999998643 33567788888887 799999999999876542 22357
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEeecCCCCceEecCCcc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--------HHCQPPIVHGDLKPSNVLLDHDMV 697 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH--------~~~~~~ivH~Dlkp~NIll~~~~~ 697 (854)
++||||+++|+|.+++... .+++.+++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred EEEEeccCCCCHHHHHhcc-------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 9999999999999999654 5677889999999999999999 77 9999999999999998877
Q ss_pred ccc-ccccccccccCCCCCC-cccccCCcccccCccccCCC------CCCccchhHHHHHHHHHHHhC----------CC
Q 043388 698 AHQ-NFSLSHQLDSASKTPS-SSIGIKGTVGYVAPEYGMGS------EASMTGDVYSFGILLLEMFTG----------RR 759 (854)
Q Consensus 698 ~~~-Dfg~~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~sDv~slGvvl~elltg----------~~ 759 (854)
.++ |||++........... ......||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 776 9999987655433211 12234699999999998776 345789999999999999999 55
Q ss_pred CCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHH
Q 043388 760 PTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVV 839 (854)
Q Consensus 760 pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 839 (854)
||...........+............... ......+++..+.+++.+||+.||++|||+.||+
T Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 289 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIP-----------------NRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289 (303)
T ss_dssp TTTTTCC-CCCCC-CHHHHTTSCCCCCCC-----------------GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred cccccCCCCccHHHHHHHHHHhhcCCCcc-----------------ccccchhhHHHHHHHHHHHhccCcccCCCHHHHH
Confidence 55432221111111111111111000000 0111224467799999999999999999999999
Q ss_pred HHHHhhhhhh
Q 043388 840 AKLCHTRETF 849 (854)
Q Consensus 840 ~~L~~~~~~~ 849 (854)
+.|+++.+..
T Consensus 290 ~~L~~l~~~~ 299 (303)
T 3gxj_A 290 KTLSQLSQQE 299 (303)
T ss_dssp HHHHC-CCC-
T ss_pred HHHHHhhhhc
Confidence 9999987654
No 178
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=351.34 Aligned_cols=271 Identities=19% Similarity=0.218 Sum_probs=208.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|+...+++.||||++........+.+.+|++++++++||||+++++++.... ......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence 357999999999999999999998899999999997666566678999999999999999999999986432 1223679
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999864221 12689999999999999999999999 9999999999999988877666 99998
Q ss_pred cccccCCCCCC------cccccCCcccccCccccCCCC---CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh
Q 043388 706 HQLDSASKTPS------SSIGIKGTVGYVAPEYGMGSE---ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK 776 (854)
Q Consensus 706 ~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~---~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~ 776 (854)
........... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...............
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 261 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh
Confidence 76543211100 011234799999999987654 689999999999999999999999643222222222111
Q ss_pred hcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 777 MTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 777 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
...... ....++..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 262 ~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 262 NQLSIP--------------------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp CC--CC--------------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred ccCCCC--------------------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 100000 00112456889999999999999999999999999876543
No 179
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-39 Score=341.01 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=194.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|.+.+.||+|+||.||+|++..++..||+|++.... ....+.+.+|++++++++||||+++++++.+.. ..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-----NM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-----eE
Confidence 468999999999999999999999899999999997543 334578899999999999999999999997655 68
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---Ccccc-cc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAH-QN 701 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~~-~D 701 (854)
++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++..+ +|
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 9999999999999998754211 12689999999999999999999999 9999999999999954 34444 59
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+......... ....||+.|+|||++. ..++.++|||||||++|||++|+.||....... .........+.
T Consensus 171 fg~a~~~~~~~~~----~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~ 243 (285)
T 3is5_A 171 FGLAELFKSDEHS----TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYKEPN 243 (285)
T ss_dssp CCCCCC--------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCC
T ss_pred eecceecCCcccC----cCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccCCcc
Confidence 9999876543322 2346899999999875 468999999999999999999999997542211 11111100000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
... . .......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~---~---------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 YAV---E---------------------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCC--------------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccc---c---------------------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 0 0001345778999999999999999999985
No 180
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2e-39 Score=340.54 Aligned_cols=246 Identities=26% Similarity=0.355 Sum_probs=178.4
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD-----E 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----C
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----e
Confidence 57999999999999999999999899999999996432 233567889999999999999999999997655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+ ++++.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred EEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 89999999 668888887654 689999999999999999999999 9999999999999999876666 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
.+.......... ...||+.|+|||.+.+..+ +.++||||+||++|||++|+.||....... .......... .
T Consensus 158 ~~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~--~ 230 (275)
T 2eue_A 158 LSNIMTDGNFLK----TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-LFKNISNGVY--T 230 (275)
T ss_dssp CC-------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCC--C
T ss_pred cceeccCccccc----CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCC--C
Confidence 998765433221 2458999999999988765 789999999999999999999997532110 0011111000 0
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ...++..+.+++.+||+.||.+|||+.|+++.
T Consensus 231 ~--------------------------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 231 L--------------------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C--------------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred C--------------------------CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 01124457889999999999999999999763
No 181
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=340.64 Aligned_cols=250 Identities=23% Similarity=0.387 Sum_probs=182.4
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
..++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 84 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN---- 84 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS----
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC----
Confidence 3568999999999999999999998899999999996432 234577899999999999999999999987654
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ |
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~d 155 (278)
T 3cok_A 85 -YVYLVLEMCHNGEMNRYLKNRVK-----PFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIAD 155 (278)
T ss_dssp -EEEEEEECCTTEEHHHHHHTCSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECC
T ss_pred -eEEEEEecCCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEe
Confidence 78999999999999999986532 689999999999999999999999 9999999999999998877666 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+.......... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .......
T Consensus 156 fg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~ 227 (278)
T 3cok_A 156 FGLATQLKMPHEKH---YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVVLA 227 (278)
T ss_dssp CTTCEECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSS
T ss_pred ecceeeccCCCCcc---eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHhhc
Confidence 99998765433221 224689999999999988899999999999999999999999975432110 0000000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. ..+ ..++.++.+++.+||+.||++|||++|+++
T Consensus 228 ~~---~~~---------------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 DY---EMP---------------------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CC---CCC---------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cc---CCc---------------------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00 000 011345778999999999999999999986
No 182
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.6e-39 Score=359.96 Aligned_cols=376 Identities=23% Similarity=0.257 Sum_probs=262.6
Q ss_pred CCcccccCchhhhcCCCCCEEecccccccccCCccccCcCCC-------------CeeecccccccccCCcCccCCCCCc
Q 043388 1 KNKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSAL-------------GMLLIRWNSLGGQIPTTLGLLRNLV 67 (854)
Q Consensus 1 ~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-------------~~L~l~~n~l~~~~~~~~~~l~~L~ 67 (854)
.|++ |.+|++|+++++|++|++++|.+++.+|.+++.+.+| ++|++++|++++ +|.. .++|+
T Consensus 20 ~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~ 94 (454)
T 1jl5_A 20 SSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLE 94 (454)
T ss_dssp ---------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCS
T ss_pred cCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCC
Confidence 3778 8999999999999999999999999999999998875 999999999994 5553 47899
Q ss_pred EEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCC---------CCCceeeccCccC
Q 043388 68 YLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSL---------KNLWWLNLEQNNL 138 (854)
Q Consensus 68 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l---------~~L~~L~L~~N~l 138 (854)
+|+|++|++++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|++ ++|++|++++|++
T Consensus 95 ~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~lp~~~~l~~L~~L~l~~N~l 165 (454)
T 1jl5_A 95 SLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSL 165 (454)
T ss_dssp EEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCC
T ss_pred EEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCCCcccCCCCCCCEEECCCCcC
Confidence 99999999997 6653 488999999999998 56532 26899999988865 5688999999998
Q ss_pred CCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccC
Q 043388 139 GMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDN 218 (854)
Q Consensus 139 ~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 218 (854)
+.+|..+ ++|++|++++|+++++ | .|..+++|++|++++|+++.++.. .++|++|++++|
T Consensus 166 -----~~lp~~~---~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~l~~~----------~~~L~~L~l~~n 225 (454)
T 1jl5_A 166 -----KKLPDLP---PSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKKLPDL----------PLSLESIVAGNN 225 (454)
T ss_dssp -----SCCCCCC---TTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSSCCCC----------CTTCCEEECCSS
T ss_pred -----cccCCCc---ccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCcCCCC----------cCcccEEECcCC
Confidence 3466543 5899999999999985 4 699999999999999999865432 258999999999
Q ss_pred cCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCC
Q 043388 219 QFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIP 298 (854)
Q Consensus 219 ~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 298 (854)
.++ .+|. +..++ .|+.|++++|++++ +|.. +++|+.|++++|++++ +|.. +++|++|++++|++++. |
T Consensus 226 ~l~-~lp~-~~~l~-~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~ 293 (454)
T 1jl5_A 226 ILE-ELPE-LQNLP-FLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-S 293 (454)
T ss_dssp CCS-SCCC-CTTCT-TCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-S
T ss_pred cCC-cccc-cCCCC-CCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-c
Confidence 998 7784 77775 79999999999995 4543 4789999999999997 4443 47899999999999963 2
Q ss_pred ccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccc
Q 043388 299 PSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLK 378 (854)
Q Consensus 299 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~ 378 (854)
.. .++|+.|++++|++++ ++.. .++|+.|++++|++++ +|..+ ..+. .+++++|.+++ +|. .
T Consensus 294 ~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~~---~~L~-~L~L~~N~l~~-lp~---~-- 355 (454)
T 1jl5_A 294 EL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPALP---PRLE-RLIASFNHLAE-VPE---L-- 355 (454)
T ss_dssp CC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCCC---TTCC-EEECCSSCCSC-CCC---C--
T ss_pred Cc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-ccccC---CcCC-EEECCCCcccc-ccc---h--
Confidence 21 1689999999999985 3321 2589999999999985 67653 3333 38899999884 554 1
Q ss_pred cccccccccceeeccCccccc--CCCcccccC-------------CCCCEEEccCccccc--ccchhhcCccCCCeeecc
Q 043388 379 NLVITCVSLEYLDISSNSFHG--VIPFSLGFM-------------KSIKELNVSSNNLSG--QIPEFLQNLSFLEFLNLS 441 (854)
Q Consensus 379 ~l~~~~~~L~~L~Ls~N~l~~--~~p~~~~~l-------------~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls 441 (854)
+.+|++|++++|++++ .+|.+++.+ ++|+.|++++|++++ .+|.+ ++.|.++
T Consensus 356 -----l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~ 424 (454)
T 1jl5_A 356 -----PQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPES------VEDLRMN 424 (454)
T ss_dssp -----CTTCCEEECCSSCCSSCCCCCTTCCEEECCC--------------------------------------------
T ss_pred -----hhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhh------HhheeCc
Confidence 4579999999999998 788888888 899999999999997 66654 5667789
Q ss_pred cccCcccCCC
Q 043388 442 YNHLEGEVPT 451 (854)
Q Consensus 442 ~N~l~~~~p~ 451 (854)
+|.+.+.+|.
T Consensus 425 ~~~~~~~~~~ 434 (454)
T 1jl5_A 425 SERVVDPYEF 434 (454)
T ss_dssp ----------
T ss_pred CcccCCcccc
Confidence 9998877653
No 183
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.3e-39 Score=354.96 Aligned_cols=250 Identities=27% Similarity=0.339 Sum_probs=192.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHH-HHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEA-LRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++... ......+.+|..+ ++.++||||+++++++.+.+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 468999999999999999999999999999999997543 2233456677776 46789999999999997755
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..|+||||++||+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++..++ |
T Consensus 113 -~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 113 -KLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 7899999999999999998754 688999999999999999999999 9999999999999998887776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||+++........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.....
T Consensus 183 FG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~-- 256 (373)
T 2r5t_A 183 FGLCKENIEHNST---TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNILNKPL-- 256 (373)
T ss_dssp CCBCGGGBCCCCC---CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHHHHSCC--
T ss_pred CccccccccCCCc---cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhccc--
Confidence 9999864432221 22357999999999999999999999999999999999999999753211 11111111100
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKL 842 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 842 (854)
.. .+ .+...+.+++.+||+.||.+||++.+.++.+
T Consensus 257 ~~----~~----------------------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 257 QL----KP----------------------NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp CC----CS----------------------SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CC----CC----------------------CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 00 00 1134577899999999999999986544433
No 184
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.5e-39 Score=339.54 Aligned_cols=259 Identities=25% Similarity=0.418 Sum_probs=206.5
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeE
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
++|++.+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++++++||||+++++++... ..++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~ 84 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQE------PIYI 84 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCEE
T ss_pred HhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcCC------CcEE
Confidence 68999999999999999999987 677899999975433 357889999999999999999999998532 3689
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccc
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSH 706 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~ 706 (854)
||||+++++|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+.
T Consensus 85 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp EEECCTTCBHHHHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 999999999999997642 12689999999999999999999999 9999999999999998876666 999998
Q ss_pred ccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 707 QLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 707 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
......... .....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ............
T Consensus 158 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~---- 229 (279)
T 1qpc_A 158 LIEDNEYTA--REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRM---- 229 (279)
T ss_dssp ECSSSCEEC--CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCC----
T ss_pred cccCccccc--ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccCC----
Confidence 776543221 122357889999999988889999999999999999999 99998753221 111111110000
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhhc
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFLG 851 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~ 851 (854)
. ....++..+.+++..||+.||++|||+.++++.|+++.....+
T Consensus 230 -~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 273 (279)
T 1qpc_A 230 -V---------------------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEG 273 (279)
T ss_dssp -C---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred -C---------------------CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccC
Confidence 0 0011245688999999999999999999999999998876543
No 185
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6e-40 Score=358.97 Aligned_cols=207 Identities=26% Similarity=0.341 Sum_probs=175.9
Q ss_pred ccHHHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-----CCCeeeEEE
Q 043388 538 ISYAELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-----HRNLIKIIT 612 (854)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~ 612 (854)
+++.+.....++|.+.++||+|+||.||+|++..+++.||||+++... ...+.+.+|+++++.+. ||||+++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 344444445678999999999999999999998899999999996432 23456788999999996 999999999
Q ss_pred EeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe
Q 043388 613 ICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 692 (854)
Q Consensus 613 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 692 (854)
++...+ ..++||||+ +++|.+++...... .+++.+++.++.||+.||+|||+. +|+||||||+|||+
T Consensus 104 ~~~~~~-----~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 170 (360)
T 3llt_A 104 KFMYYD-----HMCLIFEPL-GPSLYEIITRNNYN----GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILL 170 (360)
T ss_dssp EEEETT-----EEEEEECCC-CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred eeeECC-----eeEEEEcCC-CCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEE
Confidence 998765 789999999 88999999876432 589999999999999999999999 99999999999999
Q ss_pred cC-------------------------Ccccc-cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHH
Q 043388 693 DH-------------------------DMVAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYS 746 (854)
Q Consensus 693 ~~-------------------------~~~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~s 746 (854)
+. ++..+ +|||++........ ...||+.|+|||++.+..++.++||||
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Diws 244 (360)
T 3llt_A 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG------SIINTRQYRAPEVILNLGWDVSSDMWS 244 (360)
T ss_dssp SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC------SCCSCGGGCCHHHHTTCCCCTTHHHHH
T ss_pred ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc------CccCcccccCcHHHcCCCCCCccchHH
Confidence 74 44444 49999986544322 246899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCc
Q 043388 747 FGILLLEMFTGRRPTDAA 764 (854)
Q Consensus 747 lGvvl~elltg~~pf~~~ 764 (854)
|||++|||++|+.||...
T Consensus 245 lG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 245 FGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp HHHHHHHHHHSSCSCCCS
T ss_pred HHHHHHHHHHCCCCCCCC
Confidence 999999999999999754
No 186
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.2e-39 Score=347.41 Aligned_cols=248 Identities=22% Similarity=0.293 Sum_probs=190.1
Q ss_pred HhhccccCccCCCcceEEEEeEEC---CCceEEEEEEeeccc----ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILG---GEEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRHRNLIKIITICSSIDS 619 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 619 (854)
.++|.+.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.++++++||||+++++++...+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 468999999999999999999984 578999999997432 233456789999999999999999999997655
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccc
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 699 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~ 699 (854)
..++||||+++|+|.+++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++..+
T Consensus 95 ----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 95 ----KLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ----CEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred ----EEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 6899999999999999998654 688999999999999999999999 999999999999999887777
Q ss_pred c-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 700 Q-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 700 ~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
+ |||+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 162 l~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~ 237 (327)
T 3a62_A 162 LTDFGLCKESIHDGTV---THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTIDKILKCK 237 (327)
T ss_dssp ECCCSCC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTC
T ss_pred EEeCCcccccccCCcc---ccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCC
Confidence 6 99998765433221 12356999999999999989999999999999999999999999754221 1111111110
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----CHHHHHH
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-----EMRDVVA 840 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 840 (854)
. . .. ..+...+.+++.+||+.||++|| ++.|+++
T Consensus 238 ~--~----~p----------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 L--N----LP----------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp C--C----CC----------------------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred C--C----CC----------------------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0 0 00 01145578999999999999999 6777765
No 187
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=374.87 Aligned_cols=260 Identities=20% Similarity=0.329 Sum_probs=202.0
Q ss_pred hccccC-ccCCCcceEEEEeEEC--CCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 549 EFASSN-MIGQGSFGSVYKGILG--GEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 549 ~~~~~~-~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++.+.+ .||+|+||.||+|.+. +++..||||+++... ....+.+.+|++++++++|||||+++++|... .
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~------~ 409 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------A 409 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS------S
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC------C
Confidence 334444 7999999999999874 456789999997543 34567899999999999999999999998652 4
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++|+|.+++..... .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++..++ |||
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGKRE-----EIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTCTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred eEEEEEeCCCCcHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 7999999999999999976532 689999999999999999999999 9999999999999998887776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
+++................+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+.+.....
T Consensus 482 la~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~-- 557 (613)
T 2ozo_A 482 LSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKR-- 557 (613)
T ss_dssp TTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTCC--
T ss_pred CcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC--
Confidence 99877544332222222346789999999998899999999999999999998 99999754221 12222111100
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
......++..+.+++..||+.||++|||+.+|++.|+.+..+..
T Consensus 558 ------------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 558 ------------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp ------------------------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred ------------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 00112235678899999999999999999999999999876653
No 188
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-38 Score=357.94 Aligned_cols=351 Identities=19% Similarity=0.239 Sum_probs=237.2
Q ss_pred ccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhh
Q 043388 4 LEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRW 83 (854)
Q Consensus 4 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 83 (854)
+.+..+..++.+++|++|+|++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|+|++|+|+++ |
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 445566678888999999999999985 45 688889999999999999854 4 88889999999999999875 3
Q ss_pred hcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCC
Q 043388 84 ICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSG 163 (854)
Q Consensus 84 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~ 163 (854)
|+++++|++|+|++|+++ .+| |..+++|++|++++|+++.+ | ++++++|++|++++
T Consensus 102 ~~~l~~L~~L~L~~N~l~-~l~---~~~l~~L~~L~l~~N~l~~l------------------~--l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLT-KLD---VSQNPLLTYLNCARNTLTEI------------------D--VSHNTQLTELDCHL 157 (457)
T ss_dssp CTTCTTCCEEECCSSCCS-CCC---CTTCTTCCEEECTTSCCSCC------------------C--CTTCTTCCEEECTT
T ss_pred cCCCCcCCEEECCCCcCC-eec---CCCCCcCCEEECCCCcccee------------------c--cccCCcCCEEECCC
Confidence 888999999999999988 565 67777777777777665432 2 56678888888888
Q ss_pred CcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCC
Q 043388 164 NQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGN 243 (854)
Q Consensus 164 N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N 243 (854)
|+..+.. .|..+++|++|++++|+++.++ +..+++|+.|++++|++++. + +..++ .|+.|++++|
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---------l~~l~~L~~L~l~~N~l~~~-~--l~~l~-~L~~L~Ls~N 222 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITELD---------VSQNKLLNRLNCDTNNITKL-D--LNQNI-QLTFLDCSSN 222 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCCCC---------CTTCTTCCEEECCSSCCSCC-C--CTTCT-TCSEEECCSS
T ss_pred CCccccc--ccccCCcCCEEECCCCccceec---------cccCCCCCEEECcCCcCCee-c--cccCC-CCCEEECcCC
Confidence 8543333 4777888888888888887542 45677888888888888753 2 55554 6888888888
Q ss_pred cccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCC
Q 043388 244 QISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPS 323 (854)
Q Consensus 244 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 323 (854)
++++ +| +..+++|+.|++++|+++++.+. .+++|+.|++++| +|+.|++++|.+.+.+|
T Consensus 223 ~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~---~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~- 281 (457)
T 3bz5_A 223 KLTE-ID--VTPLTQLTYFDCSVNPLTELDVS---TLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ- 281 (457)
T ss_dssp CCSC-CC--CTTCTTCSEEECCSSCCSCCCCT---TCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE-
T ss_pred cccc-cC--ccccCCCCEEEeeCCcCCCcCHH---HCCCCCEEeccCC--------------CCCEEECCCCccCCccc-
Confidence 8876 44 77778888888888888776543 4455555555444 34455566665554444
Q ss_pred CCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCc
Q 043388 324 SLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPF 403 (854)
Q Consensus 324 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~ 403 (854)
++.+++|+.|++++|...+.+|.....+.. +++++ +++|++|+|++|++++. +
T Consensus 282 -~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~----L~l~~--------------------~~~L~~L~L~~N~l~~l-~- 334 (457)
T 3bz5_A 282 -AEGCRKIKELDVTHNTQLYLLDCQAAGITE----LDLSQ--------------------NPKLVYLYLNNTELTEL-D- 334 (457)
T ss_dssp -CTTCTTCCCCCCTTCTTCCEEECTTCCCSC----CCCTT--------------------CTTCCEEECTTCCCSCC-C-
T ss_pred -ccccccCCEEECCCCcccceeccCCCcceE----echhh--------------------cccCCEEECCCCccccc-c-
Confidence 345566666666666655555532211111 11111 23455666666666553 2
Q ss_pred ccccCCCCCEEEccCcccccccchhh-------------cCccCCCeeecccccCcccCCCC
Q 043388 404 SLGFMKSIKELNVSSNNLSGQIPEFL-------------QNLSFLEFLNLSYNHLEGEVPTK 452 (854)
Q Consensus 404 ~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------~~l~~L~~L~ls~N~l~~~~p~~ 452 (854)
++.+++|+.|++++|+|++ +|. + ..+..|..+++++|+++|.+|..
T Consensus 335 -l~~l~~L~~L~l~~N~l~~-l~~-L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 335 -VSHNTKLKSLSCVNAHIQD-FSS-VGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp -CTTCTTCSEEECCSSCCCB-CTT-GGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCTT
T ss_pred -cccCCcCcEEECCCCCCCC-ccc-cccccccCCcEEecceeeecCccccccCcEEEEcChh
Confidence 5556666666666666654 110 1 23456777888888888888764
No 189
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4e-39 Score=348.36 Aligned_cols=266 Identities=24% Similarity=0.384 Sum_probs=207.8
Q ss_pred HhhccccCccCCCcceEEEEeEEC-------CCceEEEEEEeeccc-ccchHHHHHHHHHHHhc-cCCCeeeEEEEeecc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILG-------GEEMIVAVKVINLKQ-KGAFRSFVAECEALRNI-RHRNLIKIITICSSI 617 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 617 (854)
.++|.+.+.||+|+||.||+|++. .++..||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 468999999999999999999985 356789999997543 23456789999999999 899999999998765
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCcc----------cccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDHL----------EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKP 687 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 687 (854)
+ ..++||||+++|+|.+++....... ....+++.+++.++.||+.||+|||+. +|+||||||
T Consensus 114 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 185 (334)
T 2pvf_A 114 G-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185 (334)
T ss_dssp S-----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred C-----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCcc
Confidence 4 6799999999999999998754210 112589999999999999999999999 999999999
Q ss_pred CceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcc
Q 043388 688 SNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAF 765 (854)
Q Consensus 688 ~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~ 765 (854)
+||+++.++..++ |||++.......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 264 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 264 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSSEE-CCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ceEEEcCCCCEEEcccccccccccccccc-ccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence 9999998877766 999998775543211 1122357889999999988889999999999999999999 999997532
Q ss_pred cCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhh
Q 043388 766 TEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHT 845 (854)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 845 (854)
.. .....+....... ....++..+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 265 ~~--~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 265 VE--ELFKLLKEGHRMD--------------------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HH--HHHHHHHHTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH--HHHHHHhcCCCCC--------------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11 1111111100000 0112245688999999999999999999999999998
Q ss_pred hhhh
Q 043388 846 RETF 849 (854)
Q Consensus 846 ~~~~ 849 (854)
....
T Consensus 317 ~~~~ 320 (334)
T 2pvf_A 317 LTLT 320 (334)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 7654
No 190
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.3e-39 Score=347.66 Aligned_cols=274 Identities=21% Similarity=0.322 Sum_probs=212.4
Q ss_pred HHHHHHhhccccCccCCCcceEEEEeEE-----CCCceEEEEEEeecccc-cchHHHHHHHHHHHhc-cCCCeeeEEEEe
Q 043388 542 ELSKATSEFASSNMIGQGSFGSVYKGIL-----GGEEMIVAVKVINLKQK-GAFRSFVAECEALRNI-RHRNLIKIITIC 614 (854)
Q Consensus 542 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 614 (854)
......++|.+.+.||+|+||.||+|++ ..+++.||||+++.... ...+.+.+|++++.++ +||||+++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 100 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 100 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence 3334467899999999999999999985 34678999999975432 2346789999999999 799999999998
Q ss_pred eccCCCCCceeeEEEeeccCCCHHHHhhhcCCccc----------ccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeec
Q 043388 615 SSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLE----------VCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGD 684 (854)
Q Consensus 615 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 684 (854)
...+ ...++||||+++|+|.+++........ ...+++.+++.++.|++.||+|||+. +|+|||
T Consensus 101 ~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 101 TKPG----GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp CCTT----SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred ecCC----CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 7543 247999999999999999987643110 11388999999999999999999999 999999
Q ss_pred CCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 043388 685 LKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTD 762 (854)
Q Consensus 685 lkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~ 762 (854)
|||+||+++.++..++ |||.++......... ......||+.|+|||++.+..++.++|||||||++|||+| |+.||.
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSE-EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CccceEEECCCCCEEECCCccccccccCccce-eccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999998876666 999998765433221 1223457889999999988899999999999999999998 999997
Q ss_pred CcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHH
Q 043388 763 AAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKL 842 (854)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 842 (854)
....... ............. ...++..+.+++.+||+.||.+|||+.|+++.|
T Consensus 253 ~~~~~~~-~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 253 GVKIDEE-FCRRLKEGTRMRA--------------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp TCCCSHH-HHHHHHHTCCCCC--------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccchhHH-HHHHhccCccCCC--------------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 5432211 1111111100000 011144578899999999999999999999999
Q ss_pred Hhhhhhhh
Q 043388 843 CHTRETFL 850 (854)
Q Consensus 843 ~~~~~~~~ 850 (854)
+++.+...
T Consensus 306 ~~~~~~~~ 313 (316)
T 2xir_A 306 GNLLQANA 313 (316)
T ss_dssp HHHHHHHC
T ss_pred HHHHhhhc
Confidence 99887643
No 191
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.3e-40 Score=353.33 Aligned_cols=274 Identities=21% Similarity=0.295 Sum_probs=196.0
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc-chHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG-AFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|.+.+.||+|+||.||+|++..+++.||+|+++..... ....+.+|++++++++||||+++++++...+ ..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS-----CEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC-----EEE
Confidence 5799999999999999999999989999999999644321 1224557999999999999999999997655 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++ +|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 77 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLDK-DLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCSE-EHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEeccccc-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 99999975 99999887542 688999999999999999999999 9999999999999998877766 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh---hcCCc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK---MTLPE 781 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~---~~~~~ 781 (854)
.......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ....... .....
T Consensus 148 ~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 223 (324)
T 3mtl_A 148 RAKSIPTKTY---DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEE 223 (324)
T ss_dssp ECC---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTT
T ss_pred ccccCCcccc---ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChH
Confidence 8665433222 22468999999999877 568999999999999999999999998643221 1111111 11111
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.+................ ............+...+.+++.+||+.||++|||++|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 224 TWPGILSNEEFKTYNYPK-YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp TSTTGGGCHHHHHTCCCC-CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hchhhhcchhhccccccc-ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 121111111100000000 0000001111223456789999999999999999999987
No 192
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=7.2e-39 Score=337.98 Aligned_cols=257 Identities=23% Similarity=0.327 Sum_probs=202.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc------cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK------GAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 81 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT-- 81 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC--
Confidence 3679999999999999999999998999999999975421 23578999999999999999999999997654
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---- 696 (854)
..++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 82 ---~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~ 149 (283)
T 3bhy_A 82 ---DVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNP 149 (283)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSC
T ss_pred ---eEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCC
Confidence 6899999999999999997654 689999999999999999999999 999999999999998775
Q ss_pred -ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 697 -VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 697 -~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
++++|||.+......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||....... ....+.
T Consensus 150 ~~kl~dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 224 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNIS 224 (283)
T ss_dssp CEEECCCTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHH
T ss_pred ceEEEecccceeccCCCcc----cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhH
Confidence 344599999876543322 22458999999999998899999999999999999999999997542110 111111
Q ss_pred hhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH--HHHhhh
Q 043388 776 KMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA--KLCHTR 846 (854)
Q Consensus 776 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~--~L~~~~ 846 (854)
..... .+ ......++..+.+++.+||+.||++|||+.|+++ .++.+.
T Consensus 225 ~~~~~------~~------------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 225 AVNYD------FD------------------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp TTCCC------CC------------------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred hcccC------Cc------------------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 00000 00 0011122456889999999999999999999997 344443
No 193
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.3e-39 Score=365.15 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=204.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.++||+|+||.||+|++..+++.||+|++... .......+.+|++++++++||||+++++++.+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 46799999999999999999999999999999999643 2334567889999999999999999999987655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..|+||||++||+|.+++...... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++..++ ||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~~----~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQA----GFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 789999999999999999865421 589999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc--hHhHHhhhcCC
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGL--TLHEFVKMTLP 780 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~--~~~~~~~~~~~ 780 (854)
|+++....... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+...+.. .+
T Consensus 331 Gla~~~~~~~~----~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~ 405 (576)
T 2acx_A 331 GLAVHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VP 405 (576)
T ss_dssp TTCEECCTTCC----EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CC
T ss_pred ccceecccCcc----ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-cc
Confidence 99987754322 1234799999999999998899999999999999999999999986432211 11111110 01
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----CHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-----EMRDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 840 (854)
.... ..++..+.+++.+||+.||++|| +++||++
T Consensus 406 ~~~p--------------------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 EEYS--------------------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCC--------------------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 1000 11245578999999999999999 6788865
No 194
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-39 Score=366.32 Aligned_cols=248 Identities=23% Similarity=0.299 Sum_probs=192.8
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|++.++||+|+||.||+|++..+++.||||+++.. .......+.+|+.+++.++||||+++++++...+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 46899999999999999999999999999999999743 3334466788999999999999999999998765
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeecCCCCceEecCCccccc-c
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++..++ |
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 6899999999999999998754 78999999999999999999998 7 9999999999999998887776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||+++........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.... .
T Consensus 293 FG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~-~ 366 (446)
T 4ejn_A 293 FGLCKEGIKDGAT---MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE-I 366 (446)
T ss_dssp CCCCCTTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC-C
T ss_pred CCCceeccCCCcc---cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCC-C
Confidence 9999864433222 22357999999999999999999999999999999999999999753211 1111111000 0
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----CHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-----EMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~ 840 (854)
.. +..++..+.+++.+||+.||.+|| |++|+++
T Consensus 367 ~~--------------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 RF--------------------------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CC--------------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC--------------------------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00 001144578999999999999999 9999976
No 195
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-39 Score=364.12 Aligned_cols=258 Identities=27% Similarity=0.436 Sum_probs=201.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|.+.+ +..||||+++.... ..+.+.+|++++++++||||+++++++.. + ..+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~-----~~~ 254 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-----PIY 254 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-----SCE
T ss_pred hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C-----ceE
Confidence 4678999999999999999999984 56799999975443 35789999999999999999999999864 2 479
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++..... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++..++ |||++
T Consensus 255 iv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred EEehhhcCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 99999999999999975421 2589999999999999999999999 9999999999999998877776 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+......... .....+|..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.....
T Consensus 328 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~---- 399 (452)
T 1fmk_A 328 RLIEDNEYTA--RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGYR---- 399 (452)
T ss_dssp C----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCC----
T ss_pred eecCCCceec--ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----
Confidence 8765432221 122357889999999988899999999999999999999 99999754211 11111111000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.+....++..+.+++.+||+.||++|||++++++.|+++....
T Consensus 400 ----------------------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 400 ----------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp ----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 0011123566889999999999999999999999999886543
No 196
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.3e-39 Score=375.89 Aligned_cols=253 Identities=25% Similarity=0.336 Sum_probs=199.2
Q ss_pred CccCCCcceEEEEeEE--CCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeEEE
Q 043388 554 NMIGQGSFGSVYKGIL--GGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKALVF 629 (854)
Q Consensus 554 ~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 629 (854)
+.||+|+||.||+|.+ ..+++.||||+++... ....+.+.+|++++++++|||||+++++|... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CEEEEE
Confidence 4799999999999965 4567899999997543 23457899999999999999999999998542 368999
Q ss_pred eeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccccccc
Q 043388 630 EYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSHQL 708 (854)
Q Consensus 630 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~~~ 708 (854)
||+++|+|.+++.... .+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++..++ |||+++.+
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999997654 689999999999999999999999 9999999999999999887766 99999887
Q ss_pred ccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCccccccc
Q 043388 709 DSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVIEIV 787 (854)
Q Consensus 709 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (854)
..............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+.+......
T Consensus 520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~------ 591 (635)
T 4fl3_A 520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERM------ 591 (635)
T ss_dssp TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCC------
T ss_pred ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC------
Confidence 654433222333457889999999998899999999999999999998 99999754221 111111111000
Q ss_pred CchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 788 DPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 788 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.....++.++.+++..||+.||++|||+.+|+++|+++..++
T Consensus 592 --------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 592 --------------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp --------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 011123566889999999999999999999999999987664
No 197
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.9e-39 Score=338.84 Aligned_cols=257 Identities=19% Similarity=0.317 Sum_probs=205.2
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC------
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS------ 619 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 619 (854)
...+|++.+.||+|+||.||+|++..+++.||+|+++... +.+.+|++++++++||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4578999999999999999999999899999999997543 356789999999999999999998854211
Q ss_pred -----CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC
Q 043388 620 -----KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH 694 (854)
Q Consensus 620 -----~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 694 (854)
......++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 112357999999999999999986532 2689999999999999999999999 9999999999999998
Q ss_pred Cccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 695 DMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 695 ~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
++..++ |||.+......... ....||+.|+|||++.+..++.++|||||||++|||++|..|+... ..
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~ 226 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGKR----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SK 226 (284)
T ss_dssp TTEEEECCCTTCEESSCCSCC----CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HH
T ss_pred CCCEEECcchhheeccccccc----cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HH
Confidence 877666 99999877654322 2245899999999999989999999999999999999999886421 01
Q ss_pred HhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 774 FVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 774 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
........... ..++..+.+++.+||+.||++|||+.|+++.++.+.....
T Consensus 227 ~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 227 FFTDLRDGIIS--------------------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HHHHHHTTCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HHHHhhccccc--------------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11100000000 0113457789999999999999999999999998876543
No 198
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=8.7e-39 Score=340.95 Aligned_cols=251 Identities=23% Similarity=0.263 Sum_probs=198.8
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
..++|.+.+.||+|+||.||+|++..+++.||+|+++.......+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 81 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-----HY 81 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-----EE
Confidence 3568999999999999999999999899999999998655445567889999999999999999999987655 78
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe---cCCccccc-c
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHQ-N 701 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~~~-D 701 (854)
++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++ +.++..++ |
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred EEEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEcc
Confidence 99999999999999997654 688999999999999999999999 99999999999999 55555555 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
||.+....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......
T Consensus 153 fg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~ 226 (304)
T 2jam_A 153 FGLSKMEQNGI-----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYYEF 226 (304)
T ss_dssp CSTTCCCCCBT-----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCC
T ss_pred CCcceecCCCc-----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCC
Confidence 99987554321 11235899999999999999999999999999999999999999754221 1111111111000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. .....++..+.+++.+||+.||++|||+.|+++
T Consensus 227 -----~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 227 -----ES-------------------PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -----CT-------------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -----Cc-------------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 000112456789999999999999999999986
No 199
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=352.14 Aligned_cols=275 Identities=21% Similarity=0.276 Sum_probs=197.8
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC-CCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSK-GADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 624 (854)
++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...... ....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 57999999999999999999999899999999985432 22346788999999999999999999998765321 2234
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.|+||||+ +++|.+++... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE-------KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 69999999 78999998763 678999999999999999999999 9999999999999999877766 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhh--cCC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKM--TLP 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~--~~~ 780 (854)
+++...... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+...... ..+
T Consensus 174 ~a~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~ 246 (367)
T 1cm8_A 174 LARQADSEM------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPP 246 (367)
T ss_dssp TCEECCSSC------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCC
T ss_pred ccccccccc------CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCC
Confidence 998765432 23468999999999877 67999999999999999999999999854321 111122111 111
Q ss_pred cccccccCchhhHHHhhccchh-hHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMI-QEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
......+.......+....... ...-......+...+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 247 AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 1111111111111111100000 00000111223556889999999999999999999987
No 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3e-39 Score=342.40 Aligned_cols=263 Identities=27% Similarity=0.360 Sum_probs=196.0
Q ss_pred HhhccccCccCCCcceEEEEeEECC---CceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|++.+.||+|+||.||+|++.. .+..||||+++.. .....+.+.+|++++++++||||+++++++....
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC--
Confidence 3689999999999999999998632 2347999998654 2334578899999999999999999999986533
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ 700 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~ 700 (854)
.++||||+++|+|.+++..... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++..++
T Consensus 95 ----~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 95 ----MKMVTELAPLGSLLDRLRKHQG-----HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp ----CEEEEECCTTCBHHHHHHHHGG-----GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEE
T ss_pred ----ceeeEecccCCCHHHHHHhccC-----CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEE
Confidence 6899999999999999986532 689999999999999999999999 9999999999999988876666
Q ss_pred -ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhc
Q 043388 701 -NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 701 -Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~ 778 (854)
|||.+.................+|..|+|||++.+..++.++||||||+++|||++ |+.||....... .........
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~~~ 241 (291)
T 1u46_A 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEG 241 (291)
T ss_dssp CCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSC
T ss_pred ccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHHHHccC
Confidence 99999887654432222223457889999999988889999999999999999999 999997542210 111111100
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhhh
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETFL 850 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 850 (854)
... .....++..+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 242 ~~~--------------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 242 ERL--------------------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp CCC--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CCC--------------------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 000 0001224568899999999999999999999999998876543
No 201
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.6e-38 Score=345.44 Aligned_cols=258 Identities=24% Similarity=0.351 Sum_probs=204.5
Q ss_pred HHHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc--------chHHHHHHHHHHHhc-cCCCeeeE
Q 043388 540 YAELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG--------AFRSFVAECEALRNI-RHRNLIKI 610 (854)
Q Consensus 540 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~ 610 (854)
+.......++|.+.+.||+|+||.||+|++..+|+.||||+++..... ..+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 444555678899999999999999999999888999999999754321 145678999999999 89999999
Q ss_pred EEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCce
Q 043388 611 ITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNV 690 (854)
Q Consensus 611 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NI 690 (854)
++++.... ..++||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||
T Consensus 166 ~~~~~~~~-----~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NI 231 (365)
T 2y7j_A 166 IDSYESSS-----FMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231 (365)
T ss_dssp EEEEEBSS-----EEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred EEEEeeCC-----EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 99987655 7899999999999999998654 689999999999999999999999 999999999999
Q ss_pred EecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCC------CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 043388 691 LLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG------SEASMTGDVYSFGILLLEMFTGRRPTDA 763 (854)
Q Consensus 691 ll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDv~slGvvl~elltg~~pf~~ 763 (854)
+++.++..++ |||++......... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 232 l~~~~~~ikl~DfG~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 232 LLDDNMQIRLSDFGFSCHLEPGEKL----RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp EECTTCCEEECCCTTCEECCTTCCB----CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EECCCCCEEEEecCcccccCCCccc----ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 9999877666 99999877654322 23569999999998753 3588999999999999999999999975
Q ss_pred cccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 764 AFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.... .............. .+....++..+.+++.+||+.||++|||+.|+++
T Consensus 308 ~~~~-~~~~~i~~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 308 RRQI-LMLRMIMEGQYQFS------------------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SSHH-HHHHHHHHTCCCCC------------------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCHH-HHHHHHHhCCCCCC------------------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 3211 00111111000000 0001122456889999999999999999999986
No 202
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=9.4e-39 Score=337.16 Aligned_cols=246 Identities=22% Similarity=0.349 Sum_probs=201.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..++..||+|++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK----- 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC-----
Confidence 46899999999999999999999989999999999643 2334567899999999999999999999987654
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 7899999999999999998754 688999999999999999999999 9999999999999998877666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|.+........ ....|++.|+|||++.+..++.++||||||+++|||++|+.||....... .......... .
T Consensus 159 g~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~--~ 230 (284)
T 2vgo_A 159 GWSVHAPSLRR-----RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVNVDL--K 230 (284)
T ss_dssp TTCEECSSSCB-----CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCC--C
T ss_pred cccccCccccc-----ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhcccc--C
Confidence 99876644221 22468999999999999899999999999999999999999997542111 0111111000 0
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.. ..++..+.+++.+|++.||.+|||+.|+++
T Consensus 231 ----~~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 ----FP----------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ----CC----------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ----CC----------------------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 00 011345778999999999999999999986
No 203
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=348.00 Aligned_cols=264 Identities=18% Similarity=0.225 Sum_probs=191.3
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCC---CCCc
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDS---KGAD 623 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~---~~~~ 623 (854)
.+|++.++||+|+||.||+|++..+++.||||++........+.+.+|+.++.++. ||||+++++++..... ....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 47999999999999999999999899999999997666556678899999999995 9999999999853321 2334
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC--eEeecCCCCceEecCCccccc-
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~~~- 700 (854)
..++||||++ |+|.+++...... ..+++.+++.++.||+.||+|||+. + |+||||||+||+++.++..++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESR---GPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTT---CSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred eEEEEEEecC-CCHHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 5799999996 6999998763211 2689999999999999999999999 7 999999999999999877776
Q ss_pred ccccccccccCCCCC---------CcccccCCcccccCcccc---CCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC
Q 043388 701 NFSLSHQLDSASKTP---------SSSIGIKGTVGYVAPEYG---MGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG 768 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~---~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~ 768 (854)
|||++.......... .......||+.|+|||++ .+..++.++|||||||++|||++|+.||......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 259 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL- 259 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-
Confidence 999998776533211 111134589999999998 5667899999999999999999999999743211
Q ss_pred chHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 769 LTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
............ ..+...+.+++.+||+.||++|||+.|+++.|+.+.+.
T Consensus 260 ----~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 260 ----RIVNGKYSIPPH--------------------------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp ----------CCCCTT--------------------------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----HhhcCcccCCcc--------------------------cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111110000000 00122366899999999999999999999999988764
Q ss_pred h
Q 043388 849 F 849 (854)
Q Consensus 849 ~ 849 (854)
.
T Consensus 310 ~ 310 (337)
T 3ll6_A 310 R 310 (337)
T ss_dssp T
T ss_pred c
Confidence 3
No 204
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=353.06 Aligned_cols=268 Identities=14% Similarity=0.172 Sum_probs=204.6
Q ss_pred hhccccCccCCCcceEEEEeEECC--------CceEEEEEEeecccccchHHHHHHHHHHHhccCCCeee----------
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGG--------EEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIK---------- 609 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------- 609 (854)
++|.+.+.||+|+||.||+|++.. +++.||+|++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 589999999999999999999986 4789999998744 45789999999999999987
Q ss_pred -----EEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeec
Q 043388 610 -----IITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGD 684 (854)
Q Consensus 610 -----~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~D 684 (854)
+++++...+ ...++||||+ +++|.+++..... ..+++.+++.|+.||+.||+|||++ +|+|||
T Consensus 117 ~~i~~~~~~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVHQD----KYRFLVLPSL-GRSLQSALDVSPK----HVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEETT----TEEEEEEECC-CEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred cCccchhhccccCC----cEEEEEecCC-CcCHHHHHHhCCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 566655422 2689999999 9999999987521 2789999999999999999999999 999999
Q ss_pred CCCCceEecCCc--cccc-ccccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhC
Q 043388 685 LKPSNVLLDHDM--VAHQ-NFSLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTG 757 (854)
Q Consensus 685 lkp~NIll~~~~--~~~~-Dfg~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg 757 (854)
|||+||+++.++ ..++ |||+++......... .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 264 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYG 264 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999986 4554 999998776543211 112234799999999999998999999999999999999999
Q ss_pred CCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHH
Q 043388 758 RRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRD 837 (854)
Q Consensus 758 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 837 (854)
+.||................. ........+... ....++..+.+++.+||+.||++|||++|
T Consensus 265 ~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 326 (352)
T 2jii_A 265 FLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCG-----------------HWIRPSETLQKYLKVVMALTYEEKPPYAM 326 (352)
T ss_dssp CCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTS-----------------CEECCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred CCCcccCCcCHHHHHHHHHhc-cCChhhhhhhcc-----------------ccCCCcHHHHHHHHHHHhCChhhCCCHHH
Confidence 999986532222222211110 000000000000 00011456889999999999999999999
Q ss_pred HHHHHHhhhhhhh
Q 043388 838 VVAKLCHTRETFL 850 (854)
Q Consensus 838 vl~~L~~~~~~~~ 850 (854)
+++.|+++.+...
T Consensus 327 l~~~L~~~~~~~~ 339 (352)
T 2jii_A 327 LRNNLEALLQDLR 339 (352)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 9999999987653
No 205
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.8e-39 Score=337.65 Aligned_cols=254 Identities=30% Similarity=0.387 Sum_probs=197.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.... ...+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK----GGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCE
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC----CceE
Confidence 468999999999999999999885 7789999986443 4578899999999999999999999875533 2579
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEecCCCCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccc
Confidence 99999999999999986531 2478999999999999999999999 9999999999999998877766 99998
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
......... ..+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... .....+.......
T Consensus 165 ~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~-- 234 (278)
T 1byg_A 165 KEASSTQDT------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMD-- 234 (278)
T ss_dssp -----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCCCC--
T ss_pred ccccccccC------CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCCCC--
Confidence 866543221 247889999999988889999999999999999998 99999754221 1111111100000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
....++..+.+++..||+.||++|||+.|+++.|+++....
T Consensus 235 ------------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 235 ------------------------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp ------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ------------------------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 00112456889999999999999999999999999987653
No 206
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=352.68 Aligned_cols=257 Identities=14% Similarity=0.118 Sum_probs=200.2
Q ss_pred HhhccccCccCCCcceEEEEeE-----ECCCceEEEEEEeecccccchHHHHHHHHHHHhcc---CCCeeeEEEEeeccC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGI-----LGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR---HRNLIKIITICSSID 618 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 618 (854)
.++|.+.++||+|+||.||+|. ...+++.||||+++.. ....+.+|++++++++ |+||+++++++...+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 4679999999999999999994 5567889999999644 3456788888888886 999999999997765
Q ss_pred CCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC----
Q 043388 619 SKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---- 694 (854)
Q Consensus 619 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---- 694 (854)
..++||||+++|+|.+++...... ....+++.+++.|+.||+.||+|||++ +|+||||||+|||++.
T Consensus 141 -----~~~lv~e~~~~g~L~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 141 -----GSVLVGELYSYGTLLNAINLYKNT-PEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp -----CEEEEECCCCSCBHHHHHHHHHTS-TTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTC
T ss_pred -----CcEEEEeccCCCcHHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccC
Confidence 679999999999999999864221 112689999999999999999999999 9999999999999987
Q ss_pred -------Cccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCccc
Q 043388 695 -------DMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFT 766 (854)
Q Consensus 695 -------~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~ 766 (854)
++..++ |||+|+.+...... ......+||+.|+|||++.+..++.++|||||||++|||+||+.||.....
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 290 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKG-TIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTT-EEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred ccccccccCCEEEeeCchhhhhhccCCC-ceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence 565655 99999876533221 122345799999999999999999999999999999999999999864322
Q ss_pred CCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCC-CCHHHHHHHHHhh
Q 043388 767 EGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFER-MEMRDVVAKLCHT 845 (854)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Ps~~evl~~L~~~ 845 (854)
...... ....... . .+.+.+++..|++.+|.+| |+++++.+.|++.
T Consensus 291 ~~~~~~--------~~~~~~~---------------------~----~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 291 GECKPE--------GLFRRLP---------------------H----LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp TEEEEC--------SCCTTCS---------------------S----HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred Cceeec--------hhccccC---------------------c----HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 111000 0000000 0 3346678889999999998 6788888888887
Q ss_pred hhhh
Q 043388 846 RETF 849 (854)
Q Consensus 846 ~~~~ 849 (854)
.+..
T Consensus 338 l~~~ 341 (365)
T 3e7e_A 338 FQQH 341 (365)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
No 207
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-38 Score=346.45 Aligned_cols=285 Identities=22% Similarity=0.300 Sum_probs=203.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC---CC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDS---KG 621 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 621 (854)
.++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 468999999999999999999999899999999986443 2334678899999999999999999999876431 11
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
....++||||+++ ++.+.+..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 2368999999976 88887765432 689999999999999999999999 9999999999999998877776
Q ss_pred ccccccccccCCCC-CCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh--
Q 043388 701 NFSLSHQLDSASKT-PSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK-- 776 (854)
Q Consensus 701 Dfg~~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~-- 776 (854)
|||+++.+...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~ 245 (351)
T 3mi9_A 167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLC 245 (351)
T ss_dssp CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred cchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHh
Confidence 99999877543322 122234568999999999876 458999999999999999999999998643221 1111111
Q ss_pred hcCCcccccccC-chhhHHHhhccc-hhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 777 MTLPEKVIEIVD-PSLLMEVMANNS-MIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 777 ~~~~~~~~~~~d-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
...+.......+ ............ ................+.+++.+||+.||++|||++|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111111111111 000000000000 00000000000113557899999999999999999999863
No 208
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=7.6e-39 Score=339.72 Aligned_cols=249 Identities=18% Similarity=0.290 Sum_probs=202.8
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 367999999999999999999999899999999987542 234567889999999999999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 7899999999999999987654 689999999999999999999999 9999999999999998877766 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|.+.......... ....||+.|+|||++.+..++.++||||||+++|||++|+.||....... .......... .
T Consensus 160 g~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~ 233 (294)
T 2rku_A 160 GLATKVEYDGERK---KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEY--S 233 (294)
T ss_dssp TTCEECCSTTCCB---CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCC--C
T ss_pred cCceecccCcccc---ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhccC--C
Confidence 9998765433221 22468999999999999889999999999999999999999997542111 0111110000 0
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ...+...+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~--------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 234 I--------------------------PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp C--------------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C--------------------------ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 00113457789999999999999999999874
No 209
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-39 Score=351.59 Aligned_cols=277 Identities=22% Similarity=0.292 Sum_probs=197.3
Q ss_pred HHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-----cchHHHHHHHHHHHhccCCCeeeEEEEeeccC
Q 043388 544 SKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-----GAFRSFVAECEALRNIRHRNLIKIITICSSID 618 (854)
Q Consensus 544 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 618 (854)
....++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 3446789999999999999999999998899999999964321 12356889999999999999999999987654
Q ss_pred CCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccc
Q 043388 619 SKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 698 (854)
Q Consensus 619 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 698 (854)
..++||||+++ +|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..
T Consensus 86 -----~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 151 (346)
T 1ua2_A 86 -----NISLVFDFMET-DLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVL 151 (346)
T ss_dssp -----CCEEEEECCSE-EHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred -----ceEEEEEcCCC-CHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCE
Confidence 67999999986 89998876542 678889999999999999999999 99999999999999998877
Q ss_pred cc-ccccccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh
Q 043388 699 HQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK 776 (854)
Q Consensus 699 ~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~ 776 (854)
++ |||+++......... ....||+.|+|||++.+. .++.++|||||||++|||++|.+||....... .+.....
T Consensus 152 kl~Dfg~a~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~ 227 (346)
T 1ua2_A 152 KLADFGLAKSFGSPNRAY---THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFE 227 (346)
T ss_dssp EECCCGGGSTTTSCCCCC---CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred EEEecccceeccCCcccC---CcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHH
Confidence 76 999998775433222 234689999999998764 48999999999999999999999987643221 1222221
Q ss_pred hc---CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 777 MT---LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 777 ~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.. ....+.+.... .+..................+...+.+++.+||+.||++|||+.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 228 TLGTPTEEQWPDMCSL---PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHCCCCTTTSSSTTSS---TTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HcCCCChhhhhhhccC---cccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11 11111110000 0000000000000000112234668899999999999999999999864
No 210
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=338.39 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=195.2
Q ss_pred hccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceeeEE
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKALV 628 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 628 (854)
+|....+||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-----FIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-----cEEEE
Confidence 3444568999999999999999899999999998766666678999999999999999999999997655 68999
Q ss_pred EeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC-Cccccc-cccccc
Q 043388 629 FEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHQ-NFSLSH 706 (854)
Q Consensus 629 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~~~-Dfg~~~ 706 (854)
|||+++++|.+++...... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++..++ |||.+.
T Consensus 98 ~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGP---LKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EECCSEEEHHHHHHHTTCC---CTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEeCCCCCHHHHHHhhccC---CCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 9999999999999875321 2567888999999999999999999 9999999999999986 555555 999998
Q ss_pred ccccCCCCCCcccccCCcccccCccccCCCC--CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 707 QLDSASKTPSSSIGIKGTVGYVAPEYGMGSE--ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 707 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
........ .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......................
T Consensus 172 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 247 (295)
T 2clq_A 172 RLAGINPC---TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI- 247 (295)
T ss_dssp ESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCC-
T ss_pred ccCCCCCc---ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccc-
Confidence 76543221 12246899999999987643 8899999999999999999999996432211111110000000000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
...++.++.+++.+||+.||++|||+.|+++
T Consensus 248 -------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 248 -------------------------PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -------------------------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0112456788999999999999999999986
No 211
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.7e-39 Score=350.79 Aligned_cols=277 Identities=22% Similarity=0.302 Sum_probs=199.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc--chHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++...+ .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 98 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-----R 98 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----E
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-----E
Confidence 46899999999999999999999989999999998654332 2456789999999999999999999997655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 99 ~~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 99 WYLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp EEEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 899999999999988876544 689999999999999999999999 9999999999999998877766 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC--C
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL--P 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~--~ 780 (854)
.+.......... ....||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .......... .
T Consensus 170 ~~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 245 (331)
T 4aaa_A 170 FARTLAAPGEVY---DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLI 245 (331)
T ss_dssp TC---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCC
T ss_pred CceeecCCcccc---CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCC
Confidence 998765433221 124689999999998875 68999999999999999999999997643221 1111111000 0
Q ss_pred cccccccCchh-hHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSL-LMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
........... .....................++..+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 246 PRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000 00000000000000011112335678999999999999999999999764
No 212
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4e-39 Score=352.28 Aligned_cols=199 Identities=26% Similarity=0.399 Sum_probs=174.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|.+.+.||+|+||.||+|.+..++..||+|+++... ....+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 107 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EIS 107 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-----EEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-----EEE
Confidence 57999999999999999999999999999999997653 333567899999999999999999999998755 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+||+++.++..++ |||++
T Consensus 108 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 9999999999999998764 6889999999999999999999842 7999999999999998877766 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAA 764 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~ 764 (854)
......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 ~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 180 GQLIDSMAN-----SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp HHHHHHC---------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ccccccccc-----CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 766433221 246999999999999999999999999999999999999999754
No 213
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.9e-38 Score=359.44 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=201.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.++||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.+..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 258 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT----- 258 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----
Confidence 36899999999999999999999989999999999643 2344567899999999999999999999987655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..|+||||++||+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++..++ ||
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEeccCCCHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 789999999999999999765321 12689999999999999999999999 9999999999999999887776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|+++........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...++........
T Consensus 334 Gla~~~~~~~~~---~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~~~ 409 (543)
T 3c4z_A 334 GLAVELKAGQTK---TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLEQA 409 (543)
T ss_dssp TTCEECCTTCCC---BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHHCC
T ss_pred ceeeeccCCCcc---cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhhcc
Confidence 999877544322 223579999999999999999999999999999999999999998643211 1111111110000
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM 835 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 835 (854)
. . .+..++..+.+++.+||+.||++||++
T Consensus 410 ~-~-----------------------~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 410 V-T-----------------------YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp C-C-----------------------CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred c-C-----------------------CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 0 0 001124557889999999999999975
No 214
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.8e-39 Score=345.53 Aligned_cols=263 Identities=26% Similarity=0.395 Sum_probs=204.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEE--EEEEeecc-cccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIV--AVKVINLK-QKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~v--avK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.+.||+|+||.||+|++..++..+ |+|+++.. .....+.+.+|+++++++ +||||+++++++...+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~---- 99 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG---- 99 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT----
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC----
Confidence 368999999999999999999998777755 99988643 233456789999999999 9999999999997655
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCc----------ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDH----------LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 692 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 692 (854)
..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 100 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~ 175 (327)
T 1fvr_A 100 -YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 175 (327)
T ss_dssp -EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred -ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEE
Confidence 789999999999999999865310 0112689999999999999999999999 99999999999999
Q ss_pred cCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCch
Q 043388 693 DHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLT 770 (854)
Q Consensus 693 ~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~ 770 (854)
+.++..++ |||+++........ ....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 176 ~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~ 249 (327)
T 1fvr_A 176 GENYVAKIADFGLSRGQEVYVKK----TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--E 249 (327)
T ss_dssp CGGGCEEECCTTCEESSCEECCC--------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H
T ss_pred cCCCeEEEcccCcCccccccccc----cCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--H
Confidence 98876666 99998754332221 12347889999999988889999999999999999998 99999754211 1
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
............ ....++..+.+++.+||+.||++|||+.|+++.|+++.+..
T Consensus 250 ~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 250 LYEKLPQGYRLE--------------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp HHHHGGGTCCCC--------------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHhhcCCCCC--------------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 111111000000 00112456889999999999999999999999999987654
No 215
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.8e-38 Score=354.95 Aligned_cols=263 Identities=20% Similarity=0.276 Sum_probs=203.8
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCC-CeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR-NLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|.+.++||+|+||.||+|++..+++.||||++...... ..+.+|+++++.++|+ ++..+..++...+ ..+
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~-----~~~ 79 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGD-----YNV 79 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETT-----EEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCC-----EEE
Confidence 6899999999999999999999889999999998754432 4578999999999875 4545544444333 679
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe---cCCcccc-ccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAH-QNF 702 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~~-~Df 702 (854)
+||||+ +++|.+++..... .+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++..+ +||
T Consensus 80 lvme~~-g~sL~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEECC-CCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 999999 8899999986432 689999999999999999999999 99999999999999 4555555 499
Q ss_pred ccccccccCCCCC----CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch--HhHHhh
Q 043388 703 SLSHQLDSASKTP----SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT--LHEFVK 776 (854)
Q Consensus 703 g~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~--~~~~~~ 776 (854)
|+++.+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... +..+..
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh
Confidence 9998876543321 1122467999999999999999999999999999999999999999864322110 011000
Q ss_pred hcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 777 MTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 777 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
... ..........++.++.+++..||+.||++||++.+|++.|+++....
T Consensus 231 ~~~-----------------------~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 231 KKV-----------------------ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHH-----------------------HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccc-----------------------cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 000 00001111233567899999999999999999999999999987643
No 216
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.5e-39 Score=346.09 Aligned_cols=249 Identities=18% Similarity=0.290 Sum_probs=202.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 368999999999999999999999899999999997542 234567889999999999999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 7899999999999999987654 689999999999999999999999 9999999999999999877666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK 782 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 782 (854)
|.+.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......... .
T Consensus 186 g~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~--~ 259 (335)
T 2owb_A 186 GLATKVEYDGERK---KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKNEY--S 259 (335)
T ss_dssp TTCEECCSTTCCB---CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCC--C
T ss_pred cCceecccCcccc---cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcCCC--C
Confidence 9998775433221 23469999999999999889999999999999999999999997532111 0111111000 0
Q ss_pred cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 783 VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 783 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ...+...+.+++.+||+.||++|||+.|+++.
T Consensus 260 ~--------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 260 I--------------------------PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp C--------------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred C--------------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 00113457789999999999999999999863
No 217
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=346.07 Aligned_cols=278 Identities=20% Similarity=0.276 Sum_probs=195.3
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC--------
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-------- 619 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------- 619 (854)
++|.+.+.||+|+||.||+|.+..+++.||+|++........+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 579999999999999999999998999999999987666666789999999999999999999999854321
Q ss_pred -CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec-CCcc
Q 043388 620 -KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMV 697 (854)
Q Consensus 620 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~ 697 (854)
......++||||++ |+|.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++ .++.
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 12346899999998 5999998653 678999999999999999999999 999999999999997 4445
Q ss_pred ccc-ccccccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 698 AHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 698 ~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
.++ |||.++................+|..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~~~ 238 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQMQLIL 238 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 554 99999877543322222233457999999998765 67899999999999999999999999854321 1111111
Q ss_pred hhcCCc--c-cccccC--chhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 776 KMTLPE--K-VIEIVD--PSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 776 ~~~~~~--~-~~~~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
...... . ..+... +.......... ..........++.++.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEP---HKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSC---CCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCC---CCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111000 0 000000 00000000000 00000111223567899999999999999999999986
No 218
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.4e-39 Score=347.68 Aligned_cols=271 Identities=18% Similarity=0.209 Sum_probs=200.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
++|++.+.||+|+||.||+|++..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.... ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~---~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV---SRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT---TCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC---CCceE
Confidence 6899999999999999999999989999999998643 3467899999999997 999999999987643 22679
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc-cc-cccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VA-HQNFSL 704 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~-~~Dfg~ 704 (854)
+||||+++++|.+++. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .. ++|||+
T Consensus 110 lv~e~~~~~~l~~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ---------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp EEEECCCCCCHHHHGG---------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEeccCchhHHHHHH---------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 9999999999999874 478889999999999999999999 999999999999998665 44 459999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKV 783 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 783 (854)
++........ ....||..|+|||++.+ ..++.++||||+||++|||++|+.||.........+............
T Consensus 178 a~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~ 253 (330)
T 3nsz_A 178 AEFYHPGQEY----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 253 (330)
T ss_dssp CEECCTTCCC----CSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred ceEcCCCCcc----ccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchh
Confidence 9876544332 22468999999999877 668999999999999999999999996543322222222111111000
Q ss_pred c-------cccCchhhHHHhhcc--chhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 784 I-------EIVDPSLLMEVMANN--SMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 784 ~-------~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. ...++.......... .............+..++.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 254 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 001111100000000 00000000011123567889999999999999999999987
No 219
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.6e-38 Score=334.80 Aligned_cols=248 Identities=19% Similarity=0.264 Sum_probs=197.1
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 622 (854)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+..+.++ +||||+++++++.+.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~---- 84 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD---- 84 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----
Confidence 4578999999999999999999999899999999997542 33456788999999999 9999999999997655
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc------
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM------ 696 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~------ 696 (854)
..++||||+++|+|.+++...... ...+++.+++.|+.||+.||+|||++ +|+||||||+||+++.++
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 85 -HMLIQNEYCNGGSLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred -eEEEEEEecCCCcHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 789999999999999999865311 12689999999999999999999999 999999999999998543
Q ss_pred -------------ccc-cccccccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCC
Q 043388 697 -------------VAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPT 761 (854)
Q Consensus 697 -------------~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf 761 (854)
..+ +|||.+........ ..||+.|+|||++.+. .+++++|||||||++|||++|.+|+
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 231 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISSPQV-------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLP 231 (289)
T ss_dssp -----------CCCEEECCCTTCEETTCSCC-------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred cccccccccCCceEEEEcccccccccCCccc-------cCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence 334 49999987754332 2489999999998876 5678999999999999999999876
Q ss_pred CCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 762 DAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
... ...........+. . . ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~----~~~~~~~~~~~~~-~----~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 232 RNG----DQWHEIRQGRLPR-I----P----------------------QVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp SSS----HHHHHHHTTCCCC-C----S----------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred cch----hHHHHHHcCCCCC-C----C----------------------cccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 432 1122221111110 0 0 0114557899999999999999999999763
No 220
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.7e-38 Score=337.11 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=203.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
+.|.+.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ..+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 96 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KLW 96 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eEE
Confidence 56999999999999999999999899999999997553 344678999999999999999999999997655 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.+
T Consensus 97 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccc
Confidence 999999999999998753 688999999999999999999999 9999999999999998877766 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
.......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........+...
T Consensus 167 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~-- 239 (303)
T 3a7i_A 167 GQLTDTQIKR---NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNPPTL-- 239 (303)
T ss_dssp EECBTTBCCB---CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCCC--
T ss_pred eecCcccccc---CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCCCCC--
Confidence 8775543221 2346899999999999999999999999999999999999999753211 11111111110000
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ..++..+.+++..||+.||++|||+.|+++.
T Consensus 240 --~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 240 --E----------------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp --C----------------------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred --c----------------------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 0114457899999999999999999999874
No 221
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.1e-38 Score=359.04 Aligned_cols=252 Identities=26% Similarity=0.314 Sum_probs=200.6
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc--cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
..++|.+.++||+|+||+||+|++..+++.||||++... .......+.+|++++++++||||+++++++....
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS----- 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC-----
Confidence 357899999999999999999999989999999999643 2334578899999999999999999999997655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---Cc-ccc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DM-VAH 699 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~-~~~ 699 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++. +. +++
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 7899999999999999987754 689999999999999999999999 9999999999999954 33 444
Q ss_pred cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 700 QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
+|||+++........ ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ...........
T Consensus 166 ~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~ 239 (486)
T 3mwu_A 166 IDFGLSTCFQQNTKM----KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKY 239 (486)
T ss_dssp CSCSCTTTBCCC--------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCC
T ss_pred EECCcCeECCCCCcc----CCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC
Confidence 599999876543322 23469999999999876 5899999999999999999999999754221 11111111111
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
... .+ ....++..+.+++.+||+.||.+|||+.|+++.
T Consensus 240 ~~~-----~~-------------------~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 240 AFD-----LP-------------------QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSC-----SG-------------------GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCC-----Cc-------------------ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 100 00 011124567899999999999999999999874
No 222
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.5e-38 Score=360.30 Aligned_cols=251 Identities=23% Similarity=0.309 Sum_probs=196.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..++..||+|+++... ......+.+|+.+++.++||||++++++|.+.. .
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR-----N 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----E
Confidence 468999999999999999999999999999999997542 334577899999999999999999999997655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC---c-cccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---M-VAHQ 700 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~-~~~~ 700 (854)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.. . ++++
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 899999999999999987654 689999999999999999999999 99999999999999763 3 3445
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||++......... ....||+.|+|||++. ..++.++||||+||++|+|++|+.||...... ............
T Consensus 182 DfG~a~~~~~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~ 255 (494)
T 3lij_A 182 DFGLSAVFENQKKM----KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYT 255 (494)
T ss_dssp CCTTCEECBTTBCB----CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC
T ss_pred ECCCCeECCCCccc----cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC
Confidence 99999877654322 2346999999999876 46999999999999999999999999754221 111111111110
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. ..+. ...++..+.+++.+||+.||.+|||+.|+++.
T Consensus 256 ~-----~~~~-------------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 256 F-----DSPE-------------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp C-----CSGG-------------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred C-----Cchh-------------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 0 0000 01124557899999999999999999999853
No 223
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.9e-39 Score=344.25 Aligned_cols=265 Identities=22% Similarity=0.345 Sum_probs=200.9
Q ss_pred HhhccccCccCCCcceEEEEeE-----ECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGI-----LGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.++|.+.+.||+|+||.||+|+ ...++..||||++.... .....++.+|+.++++++||||+++++++....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 4689999999999999999999 44567889999996432 334567889999999999999999999987654
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCc-ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc---
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDH-LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--- 696 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 696 (854)
..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 107 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 107 ---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp ---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred ---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 579999999999999999876421 1123589999999999999999999999 999999999999998443
Q ss_pred -ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHH
Q 043388 697 -VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEF 774 (854)
Q Consensus 697 -~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~ 774 (854)
++++|||.+........... .....||+.|+|||++.+..++.++|||||||++|||+| |+.||...... ...+.
T Consensus 181 ~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~ 257 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASYYRK-GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEF 257 (327)
T ss_dssp CEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH
T ss_pred eEEECcccccccccccccccc-CCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHH
Confidence 34459999986654332211 122457899999999988889999999999999999998 99998753211 11111
Q ss_pred hhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 775 VKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 775 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
+....... ....++..+.+++.+||+.||.+|||+.|+++.++.+...
T Consensus 258 ~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 258 VTSGGRMD--------------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp HHTTCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HhcCCCCC--------------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 11110000 0011245678999999999999999999999999987653
No 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.9e-39 Score=341.55 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=197.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-----KLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-----eEE
Confidence 468999999999999999999999899999999998766667788999999999999999999999987654 689
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++++|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||++
T Consensus 93 lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred EEEEeCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 99999999999999876432 689999999999999999999999 9999999999999998877666 99997
Q ss_pred cccccCCCCCCcccccCCcccccCcccc-----CCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYG-----MGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
......... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||....... ..........+
T Consensus 165 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~ 240 (302)
T 2j7t_A 165 AKNLKTLQK---RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPP 240 (302)
T ss_dssp HHHHHHHHC--------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC
T ss_pred ccccccccc---cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCc
Confidence 654322111 1124589999999987 46678999999999999999999999997542211 11111111100
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. ... ...++..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~----~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 241 T----LLT---------------------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp C----CSS---------------------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred c----cCC---------------------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 000 0112455789999999999999999999976
No 225
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.1e-39 Score=344.79 Aligned_cols=268 Identities=21% Similarity=0.363 Sum_probs=208.5
Q ss_pred HHHHhhccccCccCCCcceEEEEeEEC-----CCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeecc
Q 043388 544 SKATSEFASSNMIGQGSFGSVYKGILG-----GEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSI 617 (854)
Q Consensus 544 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 617 (854)
....++|.+.+.||+|+||.||+|++. .+++.||+|++..... .....+.+|++++++++||||+++++++...
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 334678999999999999999999876 3578899999975432 2345688999999999999999999998765
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCc----ccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDH----LEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 693 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 693 (854)
+ ..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 101 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 101 Q-----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp S-----SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred C-----ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 4 679999999999999999864311 0012568999999999999999999999 999999999999999
Q ss_pred CCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchH
Q 043388 694 HDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTL 771 (854)
Q Consensus 694 ~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~ 771 (854)
.++..++ |||++.......... ......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ..
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~ 249 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QV 249 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEE-GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HH
T ss_pred CCCeEEECcCccccccccccccc-cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HH
Confidence 9876666 999998765433221 1122347889999999988889999999999999999999 89998753211 11
Q ss_pred hHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 772 HEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 772 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
...+.. ..... ....++..+.+++.+||+.||++|||+.|+++.|++..+.
T Consensus 250 ~~~~~~---~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 250 LRFVME---GGLLD-----------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHHT---TCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHHc---CCcCC-----------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 111110 00000 0012245688999999999999999999999999987653
No 226
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=337.74 Aligned_cols=251 Identities=24% Similarity=0.330 Sum_probs=197.4
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.++++++||||+++++++...+ ..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT-----DL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EE
Confidence 3568999999999999999999999899999999997543 3477899999999999999999999987655 68
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++++|.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRNK-----TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 999999999999999974332 689999999999999999999999 9999999999999988877766 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .............
T Consensus 172 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~- 245 (314)
T 3com_A 172 AGQLTDTMAK---RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPPTF- 245 (314)
T ss_dssp CEECBTTBSC---BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC-
T ss_pred chhhhhhccc---cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCccc-
Confidence 9876543322 123468999999999999899999999999999999999999997532110 0000100000000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. ....++..+.+++.+||+.||.+|||+.|+++
T Consensus 246 --~---------------------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 --R---------------------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --S---------------------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --C---------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 00112455789999999999999999999976
No 227
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=359.23 Aligned_cols=314 Identities=20% Similarity=0.171 Sum_probs=286.6
Q ss_pred cccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChh
Q 043388 3 KLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPR 82 (854)
Q Consensus 3 ~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 82 (854)
+++ .+|..+. +++++|+|++|+|++..|..|..+++|++|+|++|.|++..|..|..+++|++|+|++|+++++.+.
T Consensus 22 ~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 98 (477)
T 2id5_A 22 RFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG 98 (477)
T ss_dssp CCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT
T ss_pred CcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc
Confidence 444 5777665 4899999999999988889999999999999999999999999999999999999999999988888
Q ss_pred hhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecC
Q 043388 83 WICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLS 162 (854)
Q Consensus 83 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls 162 (854)
.|.++++|++|+|++|+++ .++...|.++++|++|++++|.+..+ .|..|.++++|++|+|+
T Consensus 99 ~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 99 VFTGLSNLTKLDISENKIV-ILLDYMFQDLYNLKSLEVGDNDLVYI-----------------SHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp SSTTCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEEECCTTCCEE-----------------CTTSSTTCTTCCEEEEE
T ss_pred cccCCCCCCEEECCCCccc-cCChhHccccccCCEEECCCCcccee-----------------ChhhccCCCCCCEEECC
Confidence 8999999999999999998 67777889999999999988877644 36678999999999999
Q ss_pred CCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccC
Q 043388 163 GNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGG 242 (854)
Q Consensus 163 ~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~ 242 (854)
+|+++++++..|..+++|+.|+|++|.+..+... .|..+++|+.|++++|.+.+.+|....... .|+.|++++
T Consensus 161 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~------~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~-~L~~L~l~~ 233 (477)
T 2id5_A 161 KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDY------SFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITH 233 (477)
T ss_dssp SCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTT------CSCSCTTCCEEEEECCTTCCEECTTTTTTC-CCSEEEEES
T ss_pred CCcCcccChhHhcccCCCcEEeCCCCcCcEeChh------hcccCcccceeeCCCCccccccCcccccCc-cccEEECcC
Confidence 9999999888999999999999999999876554 578999999999999998888888777765 799999999
Q ss_pred CcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCC
Q 043388 243 NQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIP 322 (854)
Q Consensus 243 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 322 (854)
|+++...+..|.++++|+.|+|++|+++++.+..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+
T Consensus 234 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 313 (477)
T 2id5_A 234 CNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEE 313 (477)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCG
T ss_pred CcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCH
Confidence 99996666789999999999999999999999999999999999999999999999999999999999999999998778
Q ss_pred CCCcCCCCCcccccCCCcccCc
Q 043388 323 SSLGNCQNLKGFDASHNKLTGA 344 (854)
Q Consensus 323 ~~~~~l~~L~~L~ls~N~l~~~ 344 (854)
..|..+++|+.|++++|++...
T Consensus 314 ~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 314 SVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp GGBSCGGGCCEEECCSSCEECS
T ss_pred hHcCCCcccCEEEccCCCccCc
Confidence 8899999999999999999853
No 228
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.6e-38 Score=341.74 Aligned_cols=252 Identities=23% Similarity=0.280 Sum_probs=196.0
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--------ccchHHHHHHHHHHHhccCCCeeeEEEEeecc
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--------KGAFRSFVAECEALRNIRHRNLIKIITICSSI 617 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 617 (854)
..++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3478999999999999999999999899999999986432 12234578999999999999999999998643
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc-
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM- 696 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 696 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 88 ------~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 152 (322)
T 2ycf_A 88 ------DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 152 (322)
T ss_dssp ------SEEEEEECCTTEETHHHHSTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSS
T ss_pred ------ceEEEEecCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCC
Confidence 2699999999999999987654 689999999999999999999999 999999999999998754
Q ss_pred ---ccccccccccccccCCCCCCcccccCCcccccCccccC---CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch
Q 043388 697 ---VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM---GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT 770 (854)
Q Consensus 697 ---~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~ 770 (854)
++++|||.+........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||.........
T Consensus 153 ~~~~kl~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 228 (322)
T 2ycf_A 153 DCLIKITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL 228 (322)
T ss_dssp SCCEEECCCTTCEECCCCHH----HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCH
T ss_pred CCeEEEccCccceecccccc----cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHH
Confidence 44459999987654221 11245899999999863 466899999999999999999999999754332221
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.......... ..+. ....++..+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~------~~~~------------------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 229 KDQITSGKYN------FIPE------------------VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHHHTCCC------CCHH------------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHhCccc------cCch------------------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111111100 0000 01122456889999999999999999999985
No 229
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.9e-38 Score=341.68 Aligned_cols=259 Identities=18% Similarity=0.222 Sum_probs=200.2
Q ss_pred HHHHHHhhcccc-CccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhc-cCCCeeeEEEEeecc
Q 043388 542 ELSKATSEFASS-NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNI-RHRNLIKIITICSSI 617 (854)
Q Consensus 542 ~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 617 (854)
......+.|.+. +.||+|+||.||+|++..+++.||+|+++... ......+.+|+.++.++ .||||+++++++...
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 344456678887 89999999999999999899999999997543 33457889999999999 569999999999765
Q ss_pred CCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---
Q 043388 618 DSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH--- 694 (854)
Q Consensus 618 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--- 694 (854)
. ..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 102 ~-----~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~ 169 (327)
T 3lm5_A 102 S-----EIILILEYAAGGEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYP 169 (327)
T ss_dssp S-----EEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTT
T ss_pred C-----eEEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCC
Confidence 5 68999999999999999865432 2789999999999999999999999 9999999999999987
Q ss_pred Ccccc-cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 695 DMVAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 695 ~~~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
++..+ +|||++......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....
T Consensus 170 ~~~~kL~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~ 244 (327)
T 3lm5_A 170 LGDIKIVDFGMSRKIGHACEL----REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLN 244 (327)
T ss_dssp BCCEEECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHH
T ss_pred CCcEEEeeCccccccCCcccc----ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHH
Confidence 44444 599999877544322 22469999999999999999999999999999999999999997542211 1111
Q ss_pred HhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 774 FVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 774 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
........ . ......++..+.+++.+||+.||++|||++|+++.
T Consensus 245 i~~~~~~~--~----------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVNVDY--S----------------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTCCCC--C----------------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhccccc--C----------------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11110000 0 00011224557899999999999999999999763
No 230
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.5e-38 Score=361.30 Aligned_cols=251 Identities=24% Similarity=0.298 Sum_probs=198.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-------------cchHHHHHHHHHHHhccCCCeeeEEEE
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-------------GAFRSFVAECEALRNIRHRNLIKIITI 613 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~ 613 (854)
.++|.+.++||+|+||+||+|++..++..||+|++..... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5789999999999999999999998999999999964321 335678999999999999999999999
Q ss_pred eeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec
Q 043388 614 CSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD 693 (854)
Q Consensus 614 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~ 693 (854)
+.+.. ..++|||||++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++
T Consensus 115 ~~~~~-----~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 115 FEDKK-----YFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLE 180 (504)
T ss_dssp EECSS-----EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred EEcCC-----EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEe
Confidence 97655 7899999999999999997754 689999999999999999999999 999999999999998
Q ss_pred CCc----ccccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCc
Q 043388 694 HDM----VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGL 769 (854)
Q Consensus 694 ~~~----~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~ 769 (854)
.++ ++++|||++......... ....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~ 254 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYKL----RDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-D 254 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSCB----CCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-H
T ss_pred cCCCCccEEEEECCCCEEcCCCCcc----ccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 764 445599999877554322 23469999999999874 6899999999999999999999999754221 0
Q ss_pred hHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 770 TLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
............ + ......++..+.+++.+||+.||.+|||+.|+++.
T Consensus 255 ~~~~i~~~~~~~------~------------------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 255 IIKKVEKGKYYF------D------------------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHHHCCCCC------C------------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcCCCCC------C------------------ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 111111110000 0 00111224568899999999999999999999763
No 231
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.3e-39 Score=353.95 Aligned_cols=280 Identities=17% Similarity=0.213 Sum_probs=196.4
Q ss_pred HHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-----
Q 043388 545 KATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS----- 619 (854)
Q Consensus 545 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 619 (854)
....+|.+.+.||+|+||.||+|++..+++.||||++...... ..+|+++++.++||||+++++++.....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4457899999999999999999999989999999998644322 2479999999999999999999865432
Q ss_pred ----------------------------CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHH
Q 043388 620 ----------------------------KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEY 671 (854)
Q Consensus 620 ----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~ 671 (854)
....+.++||||+++ +|.+.+...... ...+++..+..++.||+.||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRS--GRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHH
Confidence 233458899999985 888877652111 1278999999999999999999
Q ss_pred HHhcCCCCeEeecCCCCceEec-CCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHH
Q 043388 672 LHHHCQPPIVHGDLKPSNVLLD-HDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFG 748 (854)
Q Consensus 672 LH~~~~~~ivH~Dlkp~NIll~-~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slG 748 (854)
||+. +|+||||||+||+++ .++..++ |||.++........ ....||+.|+|||++.+. .++.++||||+|
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS----VAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC----CCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC----cCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 9999 999999999999997 4555554 99999877544322 234689999999998875 489999999999
Q ss_pred HHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc--cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccC
Q 043388 749 ILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK--VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSM 826 (854)
Q Consensus 749 vvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 826 (854)
|++|||++|+.||...... ..+..++....... .....++.... ...........+......++..+.+++.+||+
T Consensus 230 ~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 307 (383)
T 3eb0_A 230 CVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTE-VRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307 (383)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC---CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCccccc-ccCCccCcccHHhhCCCCCCHHHHHHHHHHcc
Confidence 9999999999999864322 11222221111000 00000000000 00000000000011111235568899999999
Q ss_pred CCCCCCCCHHHHHH
Q 043388 827 ESPFERMEMRDVVA 840 (854)
Q Consensus 827 ~dP~~RPs~~evl~ 840 (854)
.||++|||+.|+++
T Consensus 308 ~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 308 YEPDLRINPYEAMA 321 (383)
T ss_dssp SSGGGSCCHHHHHT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999985
No 232
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.7e-39 Score=339.90 Aligned_cols=274 Identities=22% Similarity=0.317 Sum_probs=200.8
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 76 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-----K 76 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----E
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-----c
Confidence 368999999999999999999999899999999986543 233467889999999999999999999997655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||++ |+|.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 77 ~~lv~e~~~-~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 148 (299)
T 2r3i_A 77 LYLVFEFLH-QDLKKFMDASALT----GIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 148 (299)
T ss_dssp EEEEEECCS-EEHHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTT
T ss_pred eEEEEEccc-CCHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcch
Confidence 899999997 5999999876422 688999999999999999999999 9999999999999998877776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC-Cc
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSE-ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL-PE 781 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~-~~ 781 (854)
.+.......... ....||+.|+|||.+.+.. ++.++|||||||++|||++|+.||......+ .......... +.
T Consensus 149 ~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 224 (299)
T 2r3i_A 149 LARAFGVPVRTY---THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPD 224 (299)
T ss_dssp HHHHHCCCSBCT---TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred hhhhccCCcccc---CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCc
Confidence 998775433221 1235899999999988765 7999999999999999999999998643221 1111111110 00
Q ss_pred c-cc-cccC-chhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 K-VI-EIVD-PSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 ~-~~-~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. .. .... +......... ...........++..+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 225 EVVWPGVTSMPDYKPSFPKW---ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TTTSTTGGGSTTCCTTSCCC---CCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhhhHhhcCcccchhhhcc---cchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 00 0000 0000000000 000000011122456889999999999999999999987
No 233
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.3e-38 Score=332.71 Aligned_cols=248 Identities=25% Similarity=0.385 Sum_probs=194.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|.+.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----- 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 35899999999999999999999989999999999643 2334568899999999999999999999987655
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 DFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 7899999999999999998754 688999999999999999999999 9999999999999998877666 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE 781 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 781 (854)
|.+......... ....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ...+.......
T Consensus 156 g~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~- 228 (276)
T 2h6d_A 156 GLSNMMSDGEFL----RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGGVF- 228 (276)
T ss_dssp CGGGCCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-
T ss_pred ccccccCCCcce----ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcCcc-
Confidence 999876543221 12458999999999988765 68999999999999999999999753211 11111110000
Q ss_pred ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 782 KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 782 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. . ...+...+.+++.+||+.||++|||+.|+++.
T Consensus 229 ---~-~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 ---Y-I----------------------PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ---C-C----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---c-C----------------------chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0 01113457889999999999999999999874
No 234
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.3e-39 Score=338.25 Aligned_cols=259 Identities=19% Similarity=0.266 Sum_probs=202.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++..... ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN---TT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG---TE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC---ce
Confidence 468999999999999999999999899999999997543 2345678999999999999999999998854321 26
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEeecCCCCceEecCCcccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPP-----IVHGDLKPSNVLLDHDMVAH 699 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~~ 699 (854)
.++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. + |+||||||+||+++.++..+
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTKE--RQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhccc--CCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 89999999999999999865321 12589999999999999999999999 7 99999999999999888766
Q ss_pred c-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 700 Q-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 700 ~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
+ |||.+......... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+...
T Consensus 157 l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~ 231 (279)
T 2w5a_A 157 LGDFGLARILNHDTSF---AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREG 231 (279)
T ss_dssp ECCCCHHHHC---CHH---HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT
T ss_pred EecCchheeecccccc---ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhc
Confidence 6 99999876543211 11235899999999999988999999999999999999999999754211 111111110
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHh
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCH 844 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 844 (854)
.... + ...++..+.+++.+||+.||++|||+.|+++.+..
T Consensus 232 ~~~~----~----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 232 KFRR----I----------------------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp CCCC----C----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred cccc----C----------------------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 0000 0 01124568899999999999999999999986543
No 235
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=345.86 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=198.2
Q ss_pred HHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCC
Q 043388 541 AELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDS 619 (854)
Q Consensus 541 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 619 (854)
.++....++|++.+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+.+++++ +||||+++++++.....
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 3344456789999999999999999999988999999999975433 347889999999999 89999999999876432
Q ss_pred CC-CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccc
Q 043388 620 KG-ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 698 (854)
Q Consensus 620 ~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 698 (854)
.+ ....++||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++..
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 11 3468999999999999999987532 2688999999999999999999999 99999999999999988777
Q ss_pred cc-ccccccccccCCCCCCcccccCCcccccCccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHh
Q 043388 699 HQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM-----GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLH 772 (854)
Q Consensus 699 ~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~ 772 (854)
++ |||++......... .....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ...
T Consensus 169 kl~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~ 244 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVGR---RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALF 244 (326)
T ss_dssp EECCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHH
T ss_pred EEeeCcCceecCcCccc---cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHH
Confidence 66 99999876543221 12246899999999987 5568999999999999999999999996432110 111
Q ss_pred HHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 773 EFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 773 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.......+. ... ..++..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~----~~~----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 LIPRNPAPR----LKS----------------------KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHSCCCC----CSC----------------------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhcCcccc----CCc----------------------cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111110000 000 011455789999999999999999999987
No 236
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.8e-38 Score=346.36 Aligned_cols=282 Identities=20% Similarity=0.234 Sum_probs=203.2
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... .....+.+|++++++++||||+++++++...........
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 3689999999999999999999998999999999964332 234578899999999999999999999876543334578
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||++ |+|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||.
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-------MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999997 5999998763 688999999999999999999999 9999999999999998877666 9999
Q ss_pred ccccccCCCCCC-------cccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhh
Q 043388 705 SHQLDSASKTPS-------SSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVK 776 (854)
Q Consensus 705 ~~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~ 776 (854)
+........... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .......
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~ 237 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFG 237 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHH
Confidence 987754322111 1223568999999998754 678999999999999999999999998643211 1111111
Q ss_pred h---cCCcccccccCchhhHHHhhccch-hhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 777 M---TLPEKVIEIVDPSLLMEVMANNSM-IQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 777 ~---~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. ................+....... ...........++..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1 010111111111111111100000 000001111234567889999999999999999999987
No 237
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6e-39 Score=350.12 Aligned_cols=276 Identities=19% Similarity=0.235 Sum_probs=186.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 624 (854)
++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+++++.++||||+++++++..... .....
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 68999999999999999999999899999999986432 2335678899999999999999999999865421 11235
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+ +++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred EEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 79999999 67999988752 689999999999999999999999 9999999999999999877766 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC--C
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL--P 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~--~ 780 (854)
+++...... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+..+..... .
T Consensus 178 ~a~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~ 250 (367)
T 2fst_X 178 LARHTADEM------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPG 250 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCC
T ss_pred ccccccccC------CCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 998764321 23469999999999887 67899999999999999999999999764321 11122211111 1
Q ss_pred cccccccCchhhHHHhhccchhhH-hhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQE-DRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
......+.......+.......+. ........+...+.+++.+||+.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 111111111111111110000000 0001111234568899999999999999999999863
No 238
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=7.8e-39 Score=366.88 Aligned_cols=258 Identities=27% Similarity=0.437 Sum_probs=206.0
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCceee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.++|++.++||+|+||.||+|.+.+ +..||||+++.... ..+.+.+|+++|++++||||+++++++.. + ..+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~-----~~~ 337 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E-----PIY 337 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S-----SCE
T ss_pred hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c-----cce
Confidence 4678999999999999999999984 56799999975443 35789999999999999999999999864 2 479
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLS 705 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~ 705 (854)
+||||+++|+|.+++..... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++..++ |||++
T Consensus 338 lv~e~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred EeeehhcCCcHHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 99999999999999976421 1588999999999999999999999 9999999999999998877666 99999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+........ ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ...+.+.....
T Consensus 411 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~---- 482 (535)
T 2h8h_A 411 RLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGYR---- 482 (535)
T ss_dssp TTCCCHHHH--TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTTCC----
T ss_pred eecCCCcee--cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----
Confidence 876532111 1122347889999999988899999999999999999999 99999754221 11111111000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
......++..+.+++.+||+.||++|||+++|++.|+++....
T Consensus 483 ----------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 483 ----------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp ----------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred ----------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 0011123566889999999999999999999999999886543
No 239
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.5e-38 Score=351.65 Aligned_cols=197 Identities=24% Similarity=0.323 Sum_probs=170.4
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc------cCCCeeeEEEEeeccCCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI------RHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~ 621 (854)
.+|++.++||+|+||.||+|.+..+++.||||+++... ...+.+.+|+++++.+ +|+||+++++++....
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--- 172 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN--- 172 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT---
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC---
Confidence 57999999999999999999999899999999997532 2345678899988887 5679999999997765
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc---c
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV---A 698 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~ 698 (854)
..++||||++ ++|.+++...... .+++..++.|+.||+.||+|||+. +|+||||||+|||++.++. +
T Consensus 173 --~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vk 242 (429)
T 3kvw_A 173 --HICMTFELLS-MNLYELIKKNKFQ----GFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242 (429)
T ss_dssp --EEEEEECCCC-CBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEE
T ss_pred --eEEEEEeccC-CCHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceE
Confidence 7899999996 5999999876432 589999999999999999999999 9999999999999998864 4
Q ss_pred ccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCc
Q 043388 699 HQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAA 764 (854)
Q Consensus 699 ~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~ 764 (854)
++|||+++....... ...||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 243 L~DFG~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 243 VIDFGSSCYEHQRVY------TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ECCCTTCEETTCCCC------SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EeecccceecCCccc------ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 459999976544322 246899999999999999999999999999999999999999765
No 240
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.5e-38 Score=346.88 Aligned_cols=278 Identities=17% Similarity=0.192 Sum_probs=195.6
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 623 (854)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++..... ....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999999899999999997532 2334678899999999999999999999876442 2233
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..++||||+++ +|.+++.. .+++.++..++.||+.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCCC-CHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 67999999975 78888752 578899999999999999999999 9999999999999998877776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC--
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP-- 780 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~-- 780 (854)
|+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..+.........
T Consensus 172 g~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 246 (371)
T 2xrw_A 172 GLARTAGTSFM----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPC 246 (371)
T ss_dssp CC--------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHC-CCCCC
T ss_pred ecccccccccc----cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC
Confidence 99987654321 12246999999999999989999999999999999999999999764321 111111111000
Q ss_pred cccccccCchhhHHHhhcc------------chhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANN------------SMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
......+.+.......... ....+............+.+++.+||+.||++|||++|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 247 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0011111111100000000 000000011122346678999999999999999999999874
No 241
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.5e-37 Score=348.83 Aligned_cols=335 Identities=27% Similarity=0.399 Sum_probs=282.6
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccCh
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFP 81 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 81 (854)
|.++ .+|. +..+++|++|+|++|.+++..| ++.+++|++|++++|.+++..+ |+.+++|++|+|++|.+++..+
T Consensus 56 ~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 129 (466)
T 1o6v_A 56 LGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP 129 (466)
T ss_dssp SCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH
Confidence 4555 4664 8999999999999999996544 9999999999999999996554 9999999999999999997544
Q ss_pred hhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEec
Q 043388 82 RWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDL 161 (854)
Q Consensus 82 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~L 161 (854)
+.++++|++|+|++|+++ .++ .+..+++|++|+++ |.+. .++ .+.++++|++|++
T Consensus 130 --~~~l~~L~~L~l~~n~l~-~~~--~~~~l~~L~~L~l~-~~~~------------------~~~-~~~~l~~L~~L~l 184 (466)
T 1o6v_A 130 --LKNLTNLNRLELSSNTIS-DIS--ALSGLTSLQQLSFG-NQVT------------------DLK-PLANLTTLERLDI 184 (466)
T ss_dssp --GTTCTTCSEEEEEEEEEC-CCG--GGTTCTTCSEEEEE-ESCC------------------CCG-GGTTCTTCCEEEC
T ss_pred --HcCCCCCCEEECCCCccC-CCh--hhccCCcccEeecC-Cccc------------------Cch-hhccCCCCCEEEC
Confidence 999999999999999998 665 37888999988885 3332 122 3888999999999
Q ss_pred CCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEcc
Q 043388 162 SGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIG 241 (854)
Q Consensus 162 s~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~ 241 (854)
++|+++.+. .+..+++|++|++++|.+..... +..+++|+.|++++|++++ + ..+..++ .|+.|+++
T Consensus 185 ~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~~~--------~~~l~~L~~L~l~~n~l~~-~-~~l~~l~-~L~~L~l~ 251 (466)
T 1o6v_A 185 SSNKVSDIS--VLAKLTNLESLIATNNQISDITP--------LGILTNLDELSLNGNQLKD-I-GTLASLT-NLTDLDLA 251 (466)
T ss_dssp CSSCCCCCG--GGGGCTTCSEEECCSSCCCCCGG--------GGGCTTCCEEECCSSCCCC-C-GGGGGCT-TCSEEECC
T ss_pred cCCcCCCCh--hhccCCCCCEEEecCCccccccc--------ccccCCCCEEECCCCCccc-c-hhhhcCC-CCCEEECC
Confidence 999998763 48899999999999999875432 5678999999999999984 3 3566665 79999999
Q ss_pred CCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccC
Q 043388 242 GNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNI 321 (854)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 321 (854)
+|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..
T Consensus 252 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 252 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred CCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 999997655 8999999999999999997655 8899999999999999996554 889999999999999999766
Q ss_pred CCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCC
Q 043388 322 PSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVI 401 (854)
Q Consensus 322 ~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~ 401 (854)
| +..+++|+.|++++|++++. + .+.+ +.+|+.|++++|++++..
T Consensus 326 ~--~~~l~~L~~L~l~~n~l~~~-~--------------------------~l~~-------l~~L~~L~l~~n~l~~~~ 369 (466)
T 1o6v_A 326 P--VSSLTKLQRLFFYNNKVSDV-S--------------------------SLAN-------LTNINWLSAGHNQISDLT 369 (466)
T ss_dssp G--GGGCTTCCEEECCSSCCCCC-G--------------------------GGTT-------CTTCCEEECCSSCCCBCG
T ss_pred h--hccCccCCEeECCCCccCCc-h--------------------------hhcc-------CCCCCEEeCCCCccCccc
Confidence 5 78999999999999999842 1 1122 457999999999999887
Q ss_pred CcccccCCCCCEEEccCcccccc
Q 043388 402 PFSLGFMKSIKELNVSSNNLSGQ 424 (854)
Q Consensus 402 p~~~~~l~~L~~L~Ls~N~l~~~ 424 (854)
| +..+++|+.|++++|.+++.
T Consensus 370 ~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 370 P--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp G--GTTCTTCCEEECCCEEEECC
T ss_pred h--hhcCCCCCEEeccCCcccCC
Confidence 7 89999999999999999963
No 242
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.8e-38 Score=361.16 Aligned_cols=251 Identities=27% Similarity=0.355 Sum_probs=201.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc---ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ---KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.++|++.++||+|+||.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 99 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG----- 99 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 468999999999999999999999999999999996442 345678999999999999999999999997755
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec---CCcccc-
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAH- 699 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~~- 699 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ .++..+
T Consensus 100 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 100 YFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp EEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEE
Confidence 7899999999999999998754 689999999999999999999999 999999999999994 444444
Q ss_pred cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 700 QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
+|||++........ .....||+.|+|||++.+ .++.++||||+||++|+|++|++||...... .....+.....
T Consensus 171 ~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~ 244 (484)
T 3nyv_A 171 IDFGLSTHFEASKK----MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKY 244 (484)
T ss_dssp CCTTHHHHBCCCCS----HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC
T ss_pred EeeeeeEEcccccc----cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCC
Confidence 59999987754432 123469999999999876 6899999999999999999999999754221 11111111111
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
... .+ ....++..+.+++.+||+.||.+|||+.|+++.
T Consensus 245 ~~~-----~~-------------------~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 245 TFE-----LP-------------------QWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp CCC-----SG-------------------GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCC-----Cc-------------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 000 00 011124567899999999999999999999863
No 243
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.9e-38 Score=336.12 Aligned_cols=254 Identities=22% Similarity=0.231 Sum_probs=184.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc--chHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG--AFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|++.+.||+|+||.||+|++..+++.||+|+++..... ..+.+.++...++.++||||+++++++...+ .
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~-----~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----D 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----S
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC-----C
Confidence 46899999999999999999999989999999999754221 2233444555578889999999999998655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++ +|.+++...... ...+++..++.++.|++.||+|||+++ +|+||||||+||+++.++..++ |||
T Consensus 81 ~~lv~e~~~~-~l~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 VWICMELMDT-SLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred EEEEEehhcc-chHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 8999999975 998887653111 127899999999999999999999853 8999999999999999877776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCcccc----CCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYG----MGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
.+.......... ...||+.|+|||++ .+..++.++||||+||++|||++|+.||..................
T Consensus 156 ~~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (290)
T 3fme_A 156 ISGYLVDDVAKD----IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231 (290)
T ss_dssp ------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred Cccccccccccc----ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC
Confidence 998775543322 23589999999996 5567899999999999999999999999753222222222222111
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+... ...++..+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 232 PQLP--------------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCCC--------------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCcc--------------------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1100 0112455789999999999999999999987
No 244
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2e-39 Score=356.60 Aligned_cols=257 Identities=14% Similarity=0.166 Sum_probs=191.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHH---HHHhccCCCeeeEE-------EE
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECE---ALRNIRHRNLIKII-------TI 613 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~ 613 (854)
.++|.+.+.||+|+||.||+|++..+++.||||++... .....+.+.+|++ ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35789999999999999999999888999999999743 3345578899994 55555899999998 55
Q ss_pred eeccCC---------CCCc---eeeEEEeeccCCCHHHHhhhcCCcc-cccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 043388 614 CSSIDS---------KGAD---FKALVFEYMENGSLEDWLHQSNDHL-EVCKLTLIQRVNIAIDVASAIEYLHHHCQPPI 680 (854)
Q Consensus 614 ~~~~~~---------~~~~---~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~i 680 (854)
+...+. .+.. ..++||||+ +|+|.+++....... ....+++..++.|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 544321 0000 268999999 679999998653111 112455688889999999999999999 99
Q ss_pred EeecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCC-----------CCCccchhHHHH
Q 043388 681 VHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-----------EASMTGDVYSFG 748 (854)
Q Consensus 681 vH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDv~slG 748 (854)
+||||||+|||++.++..++ |||+++..... .....| +.|+|||++.+. .++.++||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR------VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCE------EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCc------ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 99999999999998887776 99999864332 123457 999999999887 799999999999
Q ss_pred HHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCC
Q 043388 749 ILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMES 828 (854)
Q Consensus 749 vvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 828 (854)
|++|||++|+.||......... .. . .... ..++..+.+++.+||+.|
T Consensus 301 ~il~elltg~~Pf~~~~~~~~~-~~-~--------~~~~-----------------------~~~~~~~~~li~~~L~~d 347 (377)
T 3byv_A 301 LVIYWIWCADLPITKDAALGGS-EW-I--------FRSC-----------------------KNIPQPVRALLEGFLRYP 347 (377)
T ss_dssp HHHHHHHHSSCCC------CCS-GG-G--------GSSC-----------------------CCCCHHHHHHHHHHTCSS
T ss_pred HHHHHHHHCCCCCcccccccch-hh-h--------hhhc-----------------------cCCCHHHHHHHHHHcCCC
Confidence 9999999999999754221110 00 0 0000 011455788999999999
Q ss_pred CCCCCCHHHHHH--HHHhhhh
Q 043388 829 PFERMEMRDVVA--KLCHTRE 847 (854)
Q Consensus 829 P~~RPs~~evl~--~L~~~~~ 847 (854)
|++|||+.|+++ .+.++.+
T Consensus 348 p~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 348 KEDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp GGGCCCHHHHHTSHHHHHHHH
T ss_pred chhCCCHHHHhhChHHHHHHH
Confidence 999999999986 3444443
No 245
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-38 Score=345.17 Aligned_cols=254 Identities=21% Similarity=0.288 Sum_probs=198.9
Q ss_pred HhhccccCccCCCcceEEEEeEEC---CCceEEEEEEeeccc----ccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILG---GEEMIVAVKVINLKQ----KGAFRSFVAECEALRNI-RHRNLIKIITICSSID 618 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 618 (854)
.++|.+.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 468999999999999999999984 478999999986432 23345677899999999 6999999999987655
Q ss_pred CCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccc
Q 043388 619 SKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 698 (854)
Q Consensus 619 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 698 (854)
..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++..
T Consensus 133 -----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 133 -----KLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp -----EEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred -----eEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 6899999999999999998754 689999999999999999999999 99999999999999988777
Q ss_pred cc-ccccccccccCCCCCCcccccCCcccccCccccCCC--CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHh
Q 043388 699 HQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS--EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFV 775 (854)
Q Consensus 699 ~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~ 775 (854)
++ |||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ ...+.
T Consensus 199 kl~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~ 275 (355)
T 1vzo_A 199 VLTDFGLSKEFVADETE--RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEIS 275 (355)
T ss_dssp EESCSSEEEECCGGGGG--GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHH
T ss_pred EEeeCCCCeecccCCCC--cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHH
Confidence 76 99999876443221 12235699999999998863 478999999999999999999999975432211 11111
Q ss_pred hhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC-----CHHHHHHH
Q 043388 776 KMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM-----EMRDVVAK 841 (854)
Q Consensus 776 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 841 (854)
....... ......++..+.+++.+||+.||.+|| |++|+++.
T Consensus 276 ~~~~~~~------------------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 276 RRILKSE------------------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HHHHHCC------------------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred HHHhccC------------------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 1100000 000011244577899999999999999 89999875
No 246
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.3e-39 Score=350.55 Aligned_cols=257 Identities=9% Similarity=0.010 Sum_probs=181.4
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhc--cCCCeeeEE-------EEee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNI--RHRNLIKII-------TICS 615 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~ 615 (854)
.+|.+.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 468999999999999999999998999999999986542 3345677886655555 599988865 3333
Q ss_pred ccCCC------------CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHH------HHHHHHHHHHHHHHHhcCC
Q 043388 616 SIDSK------------GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQR------VNIAIDVASAIEYLHHHCQ 677 (854)
Q Consensus 616 ~~~~~------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~------~~i~~~ia~~L~~LH~~~~ 677 (854)
..... .....++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-- 213 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSK-- 213 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC--
Confidence 22210 0134799999998 799999987532 3344445 67889999999999999
Q ss_pred CCeEeecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCC--CCCCccchhHHHHHHHHHH
Q 043388 678 PPIVHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG--SEASMTGDVYSFGILLLEM 754 (854)
Q Consensus 678 ~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvvl~el 754 (854)
+|+||||||+|||++.++..++ |||+++....... ...+|+.|+|||++.+ ..++.++|||||||++|||
T Consensus 214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~el 286 (371)
T 3q60_A 214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP------ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRV 286 (371)
T ss_dssp -TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHH
T ss_pred -CCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc------CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHH
Confidence 9999999999999999887776 9999987653221 2347799999999987 6799999999999999999
Q ss_pred HhCCCCCCCcccCCchHhHHhhhcCCcc-cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCC
Q 043388 755 FTGRRPTDAAFTEGLTLHEFVKMTLPEK-VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERM 833 (854)
Q Consensus 755 ltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 833 (854)
++|+.||.......... +........ ......+ ....++..+.+++.+||+.||++||
T Consensus 287 ltg~~Pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~li~~~L~~dP~~Rp 345 (371)
T 3q60_A 287 WCLFLPFGLVTPGIKGS--WKRPSLRVPGTDSLAFG-------------------SCTPLPDFVKTLIGRFLNFDRRRRL 345 (371)
T ss_dssp HHSSCSTTBCCTTCTTC--CCBCCTTSCCCCSCCCT-------------------TSSCCCHHHHHHHHHHTCSSTTTCC
T ss_pred HhCCCCCCCcCcccccc--hhhhhhhhccccccchh-------------------hccCCCHHHHHHHHHHcCCChhhCC
Confidence 99999998653321110 000000000 0000000 0011245688999999999999999
Q ss_pred CHHHHHH
Q 043388 834 EMRDVVA 840 (854)
Q Consensus 834 s~~evl~ 840 (854)
|+.|+++
T Consensus 346 t~~e~l~ 352 (371)
T 3q60_A 346 LPLEAME 352 (371)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 247
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.5e-38 Score=368.91 Aligned_cols=249 Identities=23% Similarity=0.323 Sum_probs=202.3
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc---cccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK---QKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKG 621 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 621 (854)
..++|.+.++||+|+||.||+|++..+++.||||+++.. .....+.+.+|..++..+ +||+|+++++++.+.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 457899999999999999999999999999999999743 334457788999999988 7999999999987655
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ- 700 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~- 700 (854)
..|+||||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+|||++.++..++
T Consensus 416 --~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 416 --RLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred --EEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 7899999999999999998764 689999999999999999999999 9999999999999999887776
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||+++........ ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.......
T Consensus 485 DFGla~~~~~~~~~---~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~-----~~~~~i~~ 556 (674)
T 3pfq_A 485 DFGMCKENIWDGVT---TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQSIME 556 (674)
T ss_dssp CCTTCEECCCTTCC---BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHS
T ss_pred ecceeeccccCCcc---cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-----HHHHHHHh
Confidence 99999865433222 23357999999999999999999999999999999999999999754221 11111111
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCH-----HHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEM-----RDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~ 840 (854)
... . . | .....++.+++..||+.||++||++ +||.+
T Consensus 557 ~~~-~-~-p---------------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 557 HNV-A-Y-P---------------------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp SCC-C-C-C---------------------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCC-C-C-C---------------------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 110 0 0 0 0124557899999999999999997 56543
No 248
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=348.63 Aligned_cols=209 Identities=22% Similarity=0.306 Sum_probs=155.1
Q ss_pred Hhhccc-cCccCCCcceEEEEeEEC--CCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCc
Q 043388 547 TSEFAS-SNMIGQGSFGSVYKGILG--GEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 547 ~~~~~~-~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 623 (854)
.+.|.+ .++||+|+||.||+|++. .+++.||||++.... ....+.+|+.++++++||||+++++++.... ..
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~---~~ 93 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA---DR 93 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETT---TT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCC---CC
Confidence 345766 568999999999999976 467899999996443 2357889999999999999999999986533 22
Q ss_pred eeeEEEeeccCCCHHHHhhhcCC---cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe----cCCc
Q 043388 624 FKALVFEYMENGSLEDWLHQSND---HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDM 696 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~ 696 (854)
..++||||+++ +|.+++..... ......+++..++.|+.||+.||+|||+. +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 78999999975 88888864321 11122589999999999999999999999 99999999999999 5555
Q ss_pred cccc-ccccccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCc
Q 043388 697 VAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAA 764 (854)
Q Consensus 697 ~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~ 764 (854)
..++ |||+++...............+||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 5555 999998876543333333346799999999998874 5899999999999999999999999754
No 249
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.1e-38 Score=344.71 Aligned_cols=288 Identities=20% Similarity=0.222 Sum_probs=202.8
Q ss_pred cHHHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc-----------chHHHHHHHHHHHhccCCCe
Q 043388 539 SYAELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG-----------AFRSFVAECEALRNIRHRNL 607 (854)
Q Consensus 539 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni 607 (854)
..+++....++|.+.+.||+|+||.||+|.+. ++..||||++...... ..+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 45677788899999999999999999999987 5899999998543221 13678999999999999999
Q ss_pred eeEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 043388 608 IKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKP 687 (854)
Q Consensus 608 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 687 (854)
+++++++...+.......++||||++ |+|.+++..... .+++..+..++.||+.||+|||+. +|+||||||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 162 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI-----VISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHP 162 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCCh
Confidence 99999987665555557899999997 588888875432 689999999999999999999999 999999999
Q ss_pred CceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcc
Q 043388 688 SNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAF 765 (854)
Q Consensus 688 ~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~ 765 (854)
+||+++.++..++ |||.+......... ....||+.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 238 (362)
T 3pg1_A 163 GNILLADNNDITICDFNLAREDTADANK----THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238 (362)
T ss_dssp GGEEECTTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred HHEEEcCCCCEEEEecCccccccccccc----ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9999998877666 99999755443322 22468999999999877 678999999999999999999999998643
Q ss_pred cCCchHhHHhhhcCCcc---cccccCchhhHHHhhccch-hhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 766 TEGLTLHEFVKMTLPEK---VIEIVDPSLLMEVMANNSM-IQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 766 ~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
... ............. ......+............ ...........+...+.+++.+||+.||++|||+.|+++.
T Consensus 239 ~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 239 FYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 211 1111111111100 0000000000000000000 0000011112224568899999999999999999999863
No 250
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.2e-37 Score=331.22 Aligned_cols=252 Identities=26% Similarity=0.348 Sum_probs=201.1
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---------cchHHHHHHHHHHHhcc-CCCeeeEEEEee
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---------GAFRSFVAECEALRNIR-HRNLIKIITICS 615 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 615 (854)
..++|.+.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 35789999999999999999999998999999999975431 22456789999999995 999999999987
Q ss_pred ccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC
Q 043388 616 SIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 695 (854)
Q Consensus 616 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 695 (854)
... ..++||||+++++|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 95 ~~~-----~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 TNT-----FFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD 160 (298)
T ss_dssp CSS-----EEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred cCC-----eEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCC
Confidence 654 7899999999999999998654 689999999999999999999999 99999999999999988
Q ss_pred ccccc-ccccccccccCCCCCCcccccCCcccccCccccC------CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC
Q 043388 696 MVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM------GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG 768 (854)
Q Consensus 696 ~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~ 768 (854)
+..++ |||.+......... ....||+.|+|||++. ...++.++||||||+++|||++|+.||......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~- 235 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEKL----REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM- 235 (298)
T ss_dssp CCEEECCCTTCEECCTTCCB----CCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-
T ss_pred CcEEEecccchhhcCCCccc----ccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-
Confidence 77766 99999877543322 2246899999999875 456889999999999999999999999753211
Q ss_pred chHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 769 LTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
............ ...+ ....++..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~-----~~~~-------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 LMLRMIMSGNYQ-----FGSP-------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHHHHTCCC-----CCTT-------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHhcCCcc-----cCcc-------------------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 011111111000 0000 01122456889999999999999999999986
No 251
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.6e-38 Score=350.76 Aligned_cols=276 Identities=21% Similarity=0.275 Sum_probs=194.9
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 626 (854)
.+|.+.+.||+|+||.||+|++..+++.||||++..... ...+|++++++++||||++++++|..... ....+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 468999999999999999999998999999999864322 23479999999999999999999865432 2233567
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC-cc-ccccccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MV-AHQNFSL 704 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~-~~~Dfg~ 704 (854)
+||||+++ ++.+.+..... ....+++..++.++.||+.||+|||+. +|+||||||+|||++.+ .. +++|||+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eehhcccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 99999986 77766654211 112789999999999999999999999 99999999999999965 44 4459999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCc--
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPE-- 781 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~-- 781 (854)
++........ ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+.+++......
T Consensus 204 a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 204 AKQLVRGEPN----VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTR 278 (420)
T ss_dssp CEECCTTCCC----CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCH
T ss_pred hhhcccCCCc----eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCH
Confidence 9876543322 234689999999998765 6899999999999999999999999864321 1222222211100
Q ss_pred -ccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 782 -KVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 782 -~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.+.. .++.... +.................++.++.+++.+||+.||++|||+.|+++
T Consensus 279 ~~~~~-~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 279 EQIRE-MNPNYTE-FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHH-HCSCCCC-CCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHh-hChhhhh-hccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0000 0000000 0000000000000000112456889999999999999999999986
No 252
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.7e-38 Score=345.43 Aligned_cols=275 Identities=19% Similarity=0.236 Sum_probs=198.8
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC-CCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSIDSK-GADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 624 (854)
.+|.+.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|+.++++++||||+++++++...+.. ....
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 579999999999999999999999999999999975432 2346788999999999999999999999765532 1123
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||++ ++|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..++ |||
T Consensus 122 ~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred EEEEEcccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 499999997 588888742 578999999999999999999999 9999999999999999887766 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc--CC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT--LP 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~~ 780 (854)
.++....... ...||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+....... .+
T Consensus 190 ~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 262 (371)
T 4exu_A 190 LARHADAEMT------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPG 262 (371)
T ss_dssp CC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred cccccccCcC------CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCc
Confidence 9986654322 2468999999999887 678999999999999999999999997543211 111111111 11
Q ss_pred cccccccCchhhHHHhhccc-hhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNS-MIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
......+............. ............+...+.+++.+||+.||++|||+.|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 11111111111111111000 00000011112235678899999999999999999999864
No 253
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.8e-38 Score=342.34 Aligned_cols=289 Identities=20% Similarity=0.247 Sum_probs=193.9
Q ss_pred HHHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-
Q 043388 541 AELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS- 619 (854)
Q Consensus 541 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~- 619 (854)
.......++|.+.+.||+|+||.||+|++..+++.||||++.... .....+.+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 456677899999999999999999999999899999999986443 233567788888999999999999999876443
Q ss_pred -CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHH--hcCCCCeEeecCCCCceEecC-C
Q 043388 620 -KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH--HHCQPPIVHGDLKPSNVLLDH-D 695 (854)
Q Consensus 620 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH--~~~~~~ivH~Dlkp~NIll~~-~ 695 (854)
....+.++||||+++ ++.+.+..... ....+++..+..++.|++.||+||| +. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 223347899999986 66555443211 1126889999999999999999999 77 9999999999999986 6
Q ss_pred ccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCC-CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 696 MVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSE-ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 696 ~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
+..++ |||+++........ ....||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ..+..
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~ 243 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSEPN----VAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHE 243 (360)
T ss_dssp TEEEECCCTTCBCCCTTSCC----CSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred CcEEEeeCCCceecCCCCCc----ccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHH
Confidence 66655 99999877654332 2346899999999987654 899999999999999999999999864322 11222
Q ss_pred HhhhcCC--cccccccCchhhH-HHhh-ccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 774 FVKMTLP--EKVIEIVDPSLLM-EVMA-NNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 774 ~~~~~~~--~~~~~~~d~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
+...... .......++.... .... ...............+...+.+++.+||+.||.+|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 2211110 0011111100000 0000 00000000000011135678899999999999999999999864
No 254
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.3e-38 Score=347.56 Aligned_cols=271 Identities=21% Similarity=0.285 Sum_probs=200.3
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc--------CCCeeeEEEEeeccCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR--------HRNLIKIITICSSIDS 619 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~~~~~~~~~ 619 (854)
++|++.++||+|+||.||+|++..+++.||||+++... ...+.+.+|++++++++ |+||+++++++.....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 67999999999999999999999899999999997432 33467889999999995 7889999999874321
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc---
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--- 696 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~--- 696 (854)
.....++||||+ ++++.+++..... ..+++.+++.|+.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 116 -~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~ 187 (397)
T 1wak_A 116 -NGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYI 187 (397)
T ss_dssp -TEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHH
T ss_pred -CCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhh
Confidence 223689999999 5577777665432 16899999999999999999999964 899999999999998764
Q ss_pred -----------------------------------------------ccccccccccccccCCCCCCcccccCCcccccC
Q 043388 697 -----------------------------------------------VAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVA 729 (854)
Q Consensus 697 -----------------------------------------------~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~a 729 (854)
++++|||.++....... ...||+.|+|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~------~~~gt~~y~a 261 (397)
T 1wak_A 188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT------EDIQTRQYRS 261 (397)
T ss_dssp HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC------SCCSCGGGCC
T ss_pred hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc------cCCCCCcccC
Confidence 34459999987754322 2368999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch-----HhHHhhh--cCCccc-----------------cc
Q 043388 730 PEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT-----LHEFVKM--TLPEKV-----------------IE 785 (854)
Q Consensus 730 PE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~-----~~~~~~~--~~~~~~-----------------~~ 785 (854)
||++.+..++.++|||||||++|||++|+.||......... ....... ..+... ..
T Consensus 262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 341 (397)
T 1wak_A 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH 341 (397)
T ss_dssp HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence 99999999999999999999999999999999865432211 1111110 000000 00
Q ss_pred ccC--chhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 786 IVD--PSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 786 ~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..+ +.-.... -.........+...+.+++.+||+.||++|||++|+++
T Consensus 342 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 342 ITKLKPWGLFEV-------LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCCCHHHH-------HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccCCcchhHh-------hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000 0000000 00011122445678999999999999999999999986
No 255
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9.7e-39 Score=340.64 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=182.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+ ..
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 88 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-----EL 88 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS-----CE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC-----Cc
Confidence 468999999999999999999998889999999986443 334567889999999999999999999997755 68
Q ss_pred eEEEeeccCCCHHHHhhhcCC--cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 626 ALVFEYMENGSLEDWLHQSND--HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
++||||+++++|.+++..... ......+++..+..++.|++.||+|||+. +|+||||||+||+++.++..++ ||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEec
Confidence 999999999999999975211 00122689999999999999999999999 9999999999999998877776 99
Q ss_pred ccccccccCCCC--CCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 703 SLSHQLDSASKT--PSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 703 g~~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
|.+......... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 244 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDP 244 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHTSSC
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHHHhccCC
Confidence 999876543211 111223469999999999876 4689999999999999999999999976432211 111111110
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+.......++. ....++..+.+++.+||+.||.+|||+.|+++
T Consensus 245 ~~~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKE------------------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----C------------------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccch------------------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00000000000 00112456789999999999999999999986
No 256
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=331.43 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=198.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc----ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ----KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++...+ .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---K 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC---C
Confidence 468999999999999999999999899999999996432 234577899999999999999999999985432 2
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
...++||||++++ +.+++...... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++..++ |
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPEK----RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTTC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CeEEEEehhccCC-HHHHHHhCccc----ccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 2679999999886 87877764322 689999999999999999999999 9999999999999998877776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCC--CCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSE--ASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
||.+.......... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ...+.+....
T Consensus 153 fg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~ 229 (305)
T 2wtk_C 153 LGVAEALHPFAADD-TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFENIGKGS 229 (305)
T ss_dssp CTTCEECCTTCSSC-EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHCC
T ss_pred cccccccCcccccc-ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHHhcCC
Confidence 99998765432221 122346999999999987644 478999999999999999999999753211 1111110000
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
. .....++..+.+++.+||+.||.+|||+.|+++.
T Consensus 230 ~---------------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 Y---------------------------AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp C---------------------------CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred C---------------------------CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 0001124557889999999999999999999864
No 257
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=340.71 Aligned_cols=260 Identities=22% Similarity=0.305 Sum_probs=195.7
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+.||+|+||.||+|++.+ .||+|+++... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~ 103 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP-----H 103 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS-----C
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----c
Confidence 4689999999999999999999874 38999986432 233456788999999999999999999998655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccccccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQNFSL 704 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~Dfg~ 704 (854)
.++||||+++++|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.+.++++|||+
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~~~~~~l~Dfg~ 175 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKI-----VLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYDNGKVVITDFGL 175 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCC-----CCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC--CCEECCCSC
T ss_pred eEEEeecccCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEeCCCEEEeecCC
Confidence 8999999999999999986532 688999999999999999999999 99999999999999976666669999
Q ss_pred ccccccCCC--CCCcccccCCcccccCccccCC---------CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhH
Q 043388 705 SHQLDSASK--TPSSSIGIKGTVGYVAPEYGMG---------SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHE 773 (854)
Q Consensus 705 ~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~ 773 (854)
+........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~ 253 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AIIW 253 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--HHHH
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 876543221 1112223458999999999874 34789999999999999999999999754221 1111
Q ss_pred HhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 774 FVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 774 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
.......... ... .++.++.+++..||+.||++|||+.|++++|+++.+..
T Consensus 254 ~~~~~~~~~~---~~~----------------------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 254 QMGTGMKPNL---SQI----------------------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp HHHTTCCCCC---CCS----------------------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred HhccCCCCCC---CcC----------------------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111100000 000 11344778999999999999999999999999987654
No 258
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.3e-38 Score=342.19 Aligned_cols=254 Identities=22% Similarity=0.245 Sum_probs=195.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHHH-HHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECEA-LRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++.... ....++..|..+ ++.++||||+++++++...+ .
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~-----~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----D 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----C
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----c
Confidence 3578999999999999999999988999999999975432 233455666665 67789999999999997655 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||+++ +|.+++...... ...+++..++.++.||+.||+|||++. +|+||||||+||+++.++..++ |||
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT--SCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred EEEEHHHhhC-cHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCC
Confidence 8999999976 999988753111 127899999999999999999999743 8999999999999999877776 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC----CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG----SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+........
T Consensus 200 ~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 275 (340)
T 3an0_A 200 ISGYLVDSVA----KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 275 (340)
T ss_dssp HHHHHSCHHH----HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC
T ss_pred Cceecccccc----cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC
Confidence 9987643211 112369999999999643 46899999999999999999999999753222111222211111
Q ss_pred CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 780 PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 780 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+... ...++.++.+++.+||+.||++|||+.|+++
T Consensus 276 ~~~~--------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 PQLP--------------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CCCC--------------------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCC--------------------------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0000 0112456889999999999999999999987
No 259
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-37 Score=341.80 Aligned_cols=264 Identities=21% Similarity=0.214 Sum_probs=139.5
Q ss_pred cCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEE
Q 043388 39 LSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKEL 118 (854)
Q Consensus 39 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 118 (854)
+.++++|++++|.++...+..|..+++|++|+|++|.++++.+.+|.++++|++|+|++|+++ .++...|.++++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEE
Confidence 355555556555555433334555555666666666655555555555666666666666555 4554555555555555
Q ss_pred EcccCCCCCCceeeccCccCCCCCCCCCCc-cccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCC
Q 043388 119 YLTFCSLKNLWWLNLEQNNLGMGTASSIPD-SLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTAND 197 (854)
Q Consensus 119 ~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~-~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~ 197 (854)
++++|+++.+ |. .|.++++|++|+|++|+++++.+..|..+++|++|++++|+++.++
T Consensus 123 ~L~~n~l~~l------------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--- 181 (390)
T 3o6n_A 123 VLERNDLSSL------------------PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--- 181 (390)
T ss_dssp ECCSSCCCCC------------------CTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---
T ss_pred ECCCCccCcC------------------CHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---
Confidence 5555544322 22 2455666666666666666666666666666666666666665432
Q ss_pred hhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCc
Q 043388 198 LDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGV 277 (854)
Q Consensus 198 ~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 277 (854)
+..+++|+.|++++|.+++. + .+..++.|++++|.++.. |.. ..++|+.|++++|++++. ..+
T Consensus 182 ------~~~l~~L~~L~l~~n~l~~~-~-----~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l 244 (390)
T 3o6n_A 182 ------LSLIPSLFHANVSYNLLSTL-A-----IPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWL 244 (390)
T ss_dssp ------GGGCTTCSEEECCSSCCSEE-E-----CCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGG
T ss_pred ------cccccccceeeccccccccc-C-----CCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHH
Confidence 23445666666666666521 1 112455555555555433 211 124555566666655542 345
Q ss_pred cCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCccc
Q 043388 278 GELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLT 342 (854)
Q Consensus 278 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 342 (854)
..+++|++|++++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|+++
T Consensus 245 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~ 308 (390)
T 3o6n_A 245 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL 308 (390)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC
T ss_pred cCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce
Confidence 555555555555555555545555555555555555555542 2333344444444444444443
No 260
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.8e-37 Score=326.34 Aligned_cols=252 Identities=25% Similarity=0.310 Sum_probs=200.5
Q ss_pred HHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 545 KATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 545 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
...++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 94 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS---- 94 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS----
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC----
Confidence 34578999999999999999999999899999999996542 344678899999999999999999999987654
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----cc
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VA 698 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~ 698 (854)
..++||||+++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.+. ++
T Consensus 95 -~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 95 -SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp -EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred -eEEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 6899999999999999987654 689999999999999999999999 999999999999997643 44
Q ss_pred ccccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 699 HQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 699 ~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
++|||.+.......... ...||+.|+|||.+.+ .++.++||||||+++|+|++|+.||....... .........
T Consensus 165 L~Dfg~~~~~~~~~~~~----~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~ 238 (287)
T 2wei_A 165 IIDFGLSTCFQQNTKMK----DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGK 238 (287)
T ss_dssp ECSTTGGGTBCCCSSCS----CHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCC
T ss_pred EeccCcceeecCCCccc----cccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCC
Confidence 45999998765433221 2348999999999876 48999999999999999999999997542110 111111111
Q ss_pred CCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 779 LPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 779 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
..... +....++..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~------------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 239 YAFDL------------------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCCCS------------------------GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCc------------------------hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00000 001112456789999999999999999999987
No 261
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.7e-37 Score=332.44 Aligned_cols=253 Identities=23% Similarity=0.362 Sum_probs=192.8
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--ccchHHHHHHHHHHHhcc--CCCeeeEEEEeeccCCCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--KGAFRSFVAECEALRNIR--HRNLIKIITICSSIDSKG 621 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~ 621 (854)
..++|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++.+++ ||||+++++++...+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~--- 101 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ--- 101 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS---
T ss_pred ccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC---
Confidence 3467999999999999999999987 58899999997543 234567899999999997 599999999987655
Q ss_pred CceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccccc
Q 043388 622 ADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQN 701 (854)
Q Consensus 622 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~D 701 (854)
..++||| +.+++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++++.++++|
T Consensus 102 --~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~kL~D 169 (313)
T 3cek_A 102 --YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLID 169 (313)
T ss_dssp --EEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTEEEECC
T ss_pred --EEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEECCeEEEee
Confidence 7899999 55789999998754 688999999999999999999999 99999999999999876666669
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCC-----------CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCch
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-----------SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLT 770 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~ 770 (854)
||.+.......... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 170 fg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 248 (313)
T 3cek_A 170 FGIANQMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248 (313)
T ss_dssp CSSSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred ccccccccCccccc-cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 99998775433221 1123468999999999875 46889999999999999999999999754322111
Q ss_pred HhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 771 LHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 771 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.............. ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 249 ~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 249 LHAIIDPNHEIEFP--------------------------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHHCTTSCCCCC--------------------------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcccccCCc--------------------------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111111000000 0013457789999999999999999999864
No 262
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.9e-37 Score=336.30 Aligned_cols=272 Identities=19% Similarity=0.254 Sum_probs=199.9
Q ss_pred hhccccCccCCCcceEEEEeEE-CCCceEEEEEEeecccccchHHHHHHHHHHHhccCCC------eeeEEEEeeccCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGIL-GGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN------LIKIITICSSIDSK 620 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~ 620 (854)
++|++.+.||+|+||.||+|.+ ..+++.||||+++... ...+.+.+|+++++.++|++ ++++++++...+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~-- 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG-- 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--
Confidence 5899999999999999999998 5578999999996432 33467889999999997654 999999987665
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC-----
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----- 695 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~----- 695 (854)
..++||||+ +++|.+++...... .+++.++..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 91 ---~~~lv~e~~-~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 159 (339)
T 1z57_A 91 ---HICIVFELL-GLSTYDFIKENGFL----PFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEA 159 (339)
T ss_dssp ---EEEEEEECC-CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ---cEEEEEcCC-CCCHHHHHHhcCCC----CCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccc
Confidence 789999999 88999999876422 688999999999999999999999 99999999999999863
Q ss_pred --------------cccc-cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 043388 696 --------------MVAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRP 760 (854)
Q Consensus 696 --------------~~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~p 760 (854)
+..+ +|||.+........ ...||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 233 (339)
T 1z57_A 160 YNPKIKRDERTLINPDIKVVDFGSATYDDEHHS------TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 233 (339)
T ss_dssp EC----CEEEEESCCCEEECCCSSCEETTSCCC------SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCccccccccccCCCceEeeCcccccCccccc------cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence 3344 59999987543322 24689999999999998999999999999999999999999
Q ss_pred CCCcccCCchHhHHhh--hcCCccccccc--------------C-chhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhc
Q 043388 761 TDAAFTEGLTLHEFVK--MTLPEKVIEIV--------------D-PSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVL 823 (854)
Q Consensus 761 f~~~~~~~~~~~~~~~--~~~~~~~~~~~--------------d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 823 (854)
|....... ....+.. ...+..+.... . ............... ........+...+.+++.+
T Consensus 234 f~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~ 311 (339)
T 1z57_A 234 FPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK-EFMLSQDVEHERLFDLIQK 311 (339)
T ss_dssp CCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG-GGCSCCSHHHHHHHHHHHH
T ss_pred CCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchh-hhcccchhhHHHHHHHHHH
Confidence 97543211 1111111 11111100000 0 000000000000000 0001112346778999999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 043388 824 CSMESPFERMEMRDVVAK 841 (854)
Q Consensus 824 cl~~dP~~RPs~~evl~~ 841 (854)
||+.||.+|||+.|+++.
T Consensus 312 ~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 312 MLEYDPAKRITLREALKH 329 (339)
T ss_dssp HTCSSTTTSCCHHHHTTS
T ss_pred HhCcCcccccCHHHHhcC
Confidence 999999999999999864
No 263
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.9e-37 Score=330.56 Aligned_cols=260 Identities=22% Similarity=0.326 Sum_probs=193.3
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC------
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS------ 619 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------ 619 (854)
..++|++.+.||+|+||.||+|++..+++.||||+++... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 4578999999999999999999998899999999996432 345678999999999999999999999865321
Q ss_pred --CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcc
Q 043388 620 --KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 697 (854)
Q Consensus 620 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 697 (854)
......++||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENL-----NQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCG-----GGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcccc-----ccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 123468999999999999999986432 678889999999999999999999 9999999999999998887
Q ss_pred ccc-ccccccccccCCC-----------CCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCc
Q 043388 698 AHQ-NFSLSHQLDSASK-----------TPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAA 764 (854)
Q Consensus 698 ~~~-Dfg~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~ 764 (854)
.++ |||.+........ .........||+.|+|||++.+. .++.++|||||||++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 776 9999987653211 01112234689999999998764 68999999999999999998 55422
Q ss_pred ccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 765 FTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
......... .... ........ ...++..+.+++.+||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~-~~~~-~~~~~~~~----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 MERVNILKK-LRSV-SIEFPPDF----------------------DDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHH-HHST-TCCCCTTC----------------------CTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHh-cccc-ccccCccc----------------------cccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 111111111 1100 00000000 01124457889999999999999999999873
No 264
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.5e-38 Score=347.14 Aligned_cols=277 Identities=19% Similarity=0.245 Sum_probs=191.9
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~ 626 (854)
.+|.+.++||+|+||.||+|++..++. ||+|++...... ..+|+++++.++||||+++++++..... ....+.+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 479999999999999999999986665 888877543221 2379999999999999999999876543 3344578
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec-CCccccc-cccc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHQ-NFSL 704 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~~~-Dfg~ 704 (854)
+||||++++ +.+.+..... ....+++..++.++.||+.||+|||+. +|+||||||+||+++ .++..++ |||+
T Consensus 115 lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAK--LKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeeccCcc-HHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 999999874 4443332110 012789999999999999999999999 999999999999998 5666555 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCC-CCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcc-
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEK- 782 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~- 782 (854)
++........ ....||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+.++........
T Consensus 189 a~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~ 263 (394)
T 4e7w_A 189 AKILIAGEPN----VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSR 263 (394)
T ss_dssp CEECCTTCCC----CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCH
T ss_pred cccccCCCCC----cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCH
Confidence 9877543322 234689999999998765 5899999999999999999999999864321 11222221111000
Q ss_pred -cccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 783 -VIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 783 -~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
.....++........ ..............++.++.+++.+||+.||.+|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFP-QIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHCGGGSSSCCC-CCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccc-cccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000000000000 0000000000011134568899999999999999999999863
No 265
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-37 Score=335.66 Aligned_cols=277 Identities=21% Similarity=0.324 Sum_probs=202.3
Q ss_pred HHhhccccCccCCCcceEEEEeEEC-CCceEEEEEEeeccc--ccchHHHHHHHHHHHhc---cCCCeeeEEEEeeccCC
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILG-GEEMIVAVKVINLKQ--KGAFRSFVAECEALRNI---RHRNLIKIITICSSIDS 619 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~ 619 (854)
+.++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+.+++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999994 678999999997432 22234567888887777 89999999999874332
Q ss_pred CCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccc
Q 043388 620 KGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 699 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~ 699 (854)
......++||||++ |+|.+++...... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++..+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 23347899999997 5999999876432 589999999999999999999999 999999999999999887776
Q ss_pred c-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc
Q 043388 700 Q-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT 778 (854)
Q Consensus 700 ~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~ 778 (854)
+ |||.+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .........
T Consensus 161 l~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~ 235 (326)
T 1blx_A 161 LADFGLARIYSFQMA----LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVI 235 (326)
T ss_dssp ECSCCSCCCCCGGGG----GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred EecCcccccccCCCC----ccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHc
Confidence 6 9999987654321 123468999999999999899999999999999999999999998643211 111111110
Q ss_pred -C--CcccccccC-chhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 779 -L--PEKVIEIVD-PSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 779 -~--~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
. ...+..... +.. ..... ...........++..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 236 GLPGEEDWPRDVALPRQ---AFHSK--SAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCCGGGSCTTCSSCGG---GSCCC--CCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCcccCccccccchh---hhccc--CcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 001100000 000 00000 000000011123556789999999999999999999985
No 266
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1e-37 Score=339.73 Aligned_cols=264 Identities=20% Similarity=0.300 Sum_probs=200.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccc-----------------hHHHHHHHHHHHhccCCCeee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGA-----------------FRSFVAECEALRNIRHRNLIK 609 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 609 (854)
.++|.+.+.||+|+||.||+|++ +++.||||++....... .+.+.+|+.++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 46899999999999999999999 78999999997432111 178999999999999999999
Q ss_pred EEEEeeccCCCCCceeeEEEeeccCCCHHHH------hhhcCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEe
Q 043388 610 IITICSSIDSKGADFKALVFEYMENGSLEDW------LHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHH-HCQPPIVH 682 (854)
Q Consensus 610 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH 682 (854)
+++++.+.+ ..++||||+++|+|.++ +.... ...+++..++.++.|++.||+|||+ . +|+|
T Consensus 108 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIITNYD-----EVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEESSS-----EEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEeeCC-----eEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 999997755 78999999999999999 54421 2278999999999999999999999 8 9999
Q ss_pred ecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCC-CCCc-cchhHHHHHHHHHHHhCCC
Q 043388 683 GDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS-EASM-TGDVYSFGILLLEMFTGRR 759 (854)
Q Consensus 683 ~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDv~slGvvl~elltg~~ 759 (854)
|||||+||+++.++..++ |||.+....... .....||+.|+|||++.+. .++. ++|||||||++|||++|+.
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 250 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDKK-----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTTE-----ECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSC
T ss_pred cCCChHhEEEcCCCcEEEecccccccccccc-----ccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCC
Confidence 999999999998887776 999998765431 1234699999999999887 5666 9999999999999999999
Q ss_pred CCCCcccCCchHhHHhhhcC--CcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHH
Q 043388 760 PTDAAFTEGLTLHEFVKMTL--PEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRD 837 (854)
Q Consensus 760 pf~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 837 (854)
||.................. +........+.. ..........++..+.+++.+||+.||.+|||+.|
T Consensus 251 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e 319 (348)
T 2pml_X 251 PFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLT-----------NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSED 319 (348)
T ss_dssp SSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTC-----------C--------CCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCCcHHHHHHHHhccCcCCccchhhhhcccc-----------ccccccchhhcCHHHHHHHHHHccCChhhCCCHHH
Confidence 99865332111111111111 100000000000 00000011223566889999999999999999999
Q ss_pred HHH
Q 043388 838 VVA 840 (854)
Q Consensus 838 vl~ 840 (854)
+++
T Consensus 320 ~l~ 322 (348)
T 2pml_X 320 ALK 322 (348)
T ss_dssp HHT
T ss_pred Hhc
Confidence 987
No 267
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.1e-37 Score=339.67 Aligned_cols=200 Identities=28% Similarity=0.364 Sum_probs=168.4
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-CC-----CeeeEEEEeeccCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HR-----NLIKIITICSSIDSK 620 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~ 620 (854)
.++|.+.+.||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.++ |+ +|+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 129 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN-- 129 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT--
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC--
Confidence 578999999999999999999999899999999997432 23466778999998885 54 4999999987755
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC--Cccc
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH--DMVA 698 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~ 698 (854)
..++||||+++ +|.+++...... .+++..++.++.|++.||+|||++ ..+|+||||||+|||++. ++..
T Consensus 130 ---~~~lv~e~~~~-~L~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~ 200 (382)
T 2vx3_A 130 ---HLCLVFEMLSY-NLYDLLRNTNFR----GVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAI 200 (382)
T ss_dssp ---EEEEEEECCCC-BHHHHHHHTTTS----CCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCE
T ss_pred ---ceEEEEecCCC-CHHHHHhhcCcC----CCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcE
Confidence 78999999965 999999876422 689999999999999999999952 128999999999999954 4444
Q ss_pred c-cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCc
Q 043388 699 H-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAA 764 (854)
Q Consensus 699 ~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~ 764 (854)
+ +|||+++....... ...||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 201 kL~DFG~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 201 KIVDFGSSCQLGQRIY------QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EECCCTTCEETTCCCC------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEeccCceecccccc------cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4 49999987754322 246899999999999999999999999999999999999999864
No 268
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.1e-36 Score=341.70 Aligned_cols=333 Identities=19% Similarity=0.167 Sum_probs=260.0
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
++......+...+..+..++.+++|++|++++|.+++. | .|+.+++|++|+|++|+|+++ | ++.+++|++|+|++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDS 94 (457)
T ss_dssp HHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCS
T ss_pred HHHHHHHhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcC
Confidence 33344445555556667889999999999999999954 5 689999999999999999975 4 88999999999999
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+|+ .+| |.++++|++|++++|+++. +| ++++++|++|++++|+|+++ .+..+
T Consensus 95 N~l~-~~~---~~~l~~L~~L~L~~N~l~~------------------l~--~~~l~~L~~L~l~~N~l~~l---~l~~l 147 (457)
T 3bz5_A 95 NKLT-NLD---VTPLTKLTYLNCDTNKLTK------------------LD--VSQNPLLTYLNCARNTLTEI---DVSHN 147 (457)
T ss_dssp SCCS-CCC---CTTCTTCCEEECCSSCCSC------------------CC--CTTCTTCCEEECTTSCCSCC---CCTTC
T ss_pred CCCc-eee---cCCCCcCCEEECCCCcCCe------------------ec--CCCCCcCCEEECCCCcccee---ccccC
Confidence 9998 554 6777777777777776643 33 77889999999999999986 38889
Q ss_pred CCCCeEeccccc-ccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccccc
Q 043388 178 KNLWWLNLEQNN-LGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNL 256 (854)
Q Consensus 178 ~~L~~L~L~~N~-l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l 256 (854)
++|++|++++|. ++.+ .+..+++|++|++++|++++ +| +..++ .|+.|++++|++++. .++.+
T Consensus 148 ~~L~~L~l~~n~~~~~~---------~~~~l~~L~~L~ls~n~l~~-l~--l~~l~-~L~~L~l~~N~l~~~---~l~~l 211 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL---------DVTPQTQLTTLDCSFNKITE-LD--VSQNK-LLNRLNCDTNNITKL---DLNQN 211 (457)
T ss_dssp TTCCEEECTTCSCCCCC---------CCTTCTTCCEEECCSSCCCC-CC--CTTCT-TCCEEECCSSCCSCC---CCTTC
T ss_pred CcCCEEECCCCCccccc---------ccccCCcCCEEECCCCccce-ec--cccCC-CCCEEECcCCcCCee---ccccC
Confidence 999999999994 4433 25678899999999999985 55 56664 789999999999865 38888
Q ss_pred ccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCccccc
Q 043388 257 VNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDA 336 (854)
Q Consensus 257 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 336 (854)
++|+.|++++|+++++ | ++.+++|+.|++++|++++.. ++.+++|+.|++++| +|+.|++
T Consensus 212 ~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l 271 (457)
T 3bz5_A 212 IQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDL 271 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCC
T ss_pred CCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEEC
Confidence 9999999999999874 4 788899999999999998654 455677888887776 4667899
Q ss_pred CCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEc
Q 043388 337 SHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNV 416 (854)
Q Consensus 337 s~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 416 (854)
++|.+.+.+|. ..+..+.. +++++|...+.+|... .+|+.|++++| ++|++|+|
T Consensus 272 ~~n~~~~~~~~--~~l~~L~~-L~Ls~n~~l~~l~~~~----------~~L~~L~l~~~-------------~~L~~L~L 325 (457)
T 3bz5_A 272 THNTQLIYFQA--EGCRKIKE-LDVTHNTQLYLLDCQA----------AGITELDLSQN-------------PKLVYLYL 325 (457)
T ss_dssp TTCTTCCEEEC--TTCTTCCC-CCCTTCTTCCEEECTT----------CCCSCCCCTTC-------------TTCCEEEC
T ss_pred CCCccCCcccc--cccccCCE-EECCCCcccceeccCC----------CcceEechhhc-------------ccCCEEEC
Confidence 99998877773 33333333 6666666555555321 23445554444 78999999
Q ss_pred cCcccccccchhhcCccCCCeeecccccCcc
Q 043388 417 SSNNLSGQIPEFLQNLSFLEFLNLSYNHLEG 447 (854)
Q Consensus 417 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 447 (854)
++|+|++. + +.++++|+.|++++|++++
T Consensus 326 ~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 326 NNTELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp TTCCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred CCCccccc-c--cccCCcCcEEECCCCCCCC
Confidence 99999984 3 8999999999999999998
No 269
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.9e-37 Score=358.26 Aligned_cols=339 Identities=20% Similarity=0.215 Sum_probs=212.8
Q ss_pred cCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEE
Q 043388 39 LSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKEL 118 (854)
Q Consensus 39 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 118 (854)
+.+++.|++++|.++.+.+..|..+++|++|+|++|.|+++.|.+|+++++|++|+|++|.|+ .+|...|.++++|++|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC-CCCHHHHcCCCCCCEE
Confidence 466777777777777665666777777888888888777777777777778888888888777 5666777777777777
Q ss_pred EcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCCh
Q 043388 119 YLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDL 198 (854)
Q Consensus 119 ~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~ 198 (854)
++++|.+..+ .+..|+++++|++|+|++|+|++++|..|..+++|++|+|++|.++.++
T Consensus 129 ~L~~n~l~~l-----------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---- 187 (597)
T 3oja_B 129 VLERNDLSSL-----------------PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---- 187 (597)
T ss_dssp ECCSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC----
T ss_pred EeeCCCCCCC-----------------CHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC----
Confidence 7777666433 1234677888888888888888888878888888888888888776542
Q ss_pred hhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCcc
Q 043388 199 DFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVG 278 (854)
Q Consensus 199 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 278 (854)
+..+++|+.|++++|.+++. + .+..|+.|++++|.++...+.. .++|+.|+|++|.+++
T Consensus 188 -----~~~l~~L~~L~l~~n~l~~l-~-----~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~------- 246 (597)
T 3oja_B 188 -----LSLIPSLFHANVSYNLLSTL-A-----IPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD------- 246 (597)
T ss_dssp -----GGGCTTCSEEECCSSCCSEE-E-----CCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC-------
T ss_pred -----hhhhhhhhhhhcccCccccc-c-----CCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC-------
Confidence 33456777777777776631 1 1123555555555554322211 1344444444444443
Q ss_pred CcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHH
Q 043388 279 ELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVY 358 (854)
Q Consensus 279 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~ 358 (854)
+..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..
T Consensus 247 -------------------~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~---------- 296 (597)
T 3oja_B 247 -------------------TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLY---------- 296 (597)
T ss_dssp -------------------CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECS----------
T ss_pred -------------------ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcc----------
Confidence 2334445555555555555555555555555555555555555542 2211
Q ss_pred HHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCee
Q 043388 359 LALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFL 438 (854)
Q Consensus 359 l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 438 (854)
++. +++|+.|+|++|.++ .+|..++.+++|+.|+|++|+|++. | +..+++|+.|
T Consensus 297 ---------------~~~-------l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L 350 (597)
T 3oja_B 297 ---------------GQP-------IPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNL 350 (597)
T ss_dssp ---------------SSC-------CTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEE
T ss_pred ---------------ccc-------CCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEE
Confidence 111 234666666666666 4555566677777777777777643 2 5566777777
Q ss_pred ecccccCcccCCCCccccCcccccccccccccCCccccc
Q 043388 439 NLSYNHLEGEVPTKGVFSNKTKISLQVNVKLCGGIDELH 477 (854)
Q Consensus 439 ~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~ 477 (854)
++++|+|+|..+. ..+.......+.++...|+.+....
T Consensus 351 ~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~~~~ 388 (597)
T 3oja_B 351 TLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDYQLE 388 (597)
T ss_dssp ECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTCEEE
T ss_pred EeeCCCCCChhHH-HHHHHHhhhccccccccCCcchhcc
Confidence 8888877776432 2355555556777888888765543
No 270
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.9e-37 Score=360.92 Aligned_cols=258 Identities=21% Similarity=0.319 Sum_probs=202.6
Q ss_pred HhhccccCccCCCcceEEEEeEECC---CceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGG---EEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGA 622 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 622 (854)
.++|.+.+.||+|+||.||+|.+.. .+..||+|+++... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~----- 463 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 463 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-----
Confidence 4678899999999999999999854 35689999986543 23346789999999999999999999998432
Q ss_pred ceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-c
Q 043388 623 DFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-N 701 (854)
Q Consensus 623 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-D 701 (854)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++..++ |
T Consensus 464 -~~~lv~E~~~~g~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~D 534 (656)
T 2j0j_A 464 -PVWIIMELCTLGELRSFLQVRKF-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 534 (656)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred -ceEEEEEcCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEe
Confidence 46899999999999999986532 688999999999999999999999 9999999999999998877776 9
Q ss_pred cccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhhhcCC
Q 043388 702 FSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 702 fg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
||+++......... .....+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+.....
T Consensus 535 FG~a~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~ 610 (656)
T 2j0j_A 535 FGLSRYMEDSTYYK--ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGER 610 (656)
T ss_dssp CCCCCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCC
T ss_pred cCCCeecCCCccee--ccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCC
Confidence 99998775443221 122357889999999988899999999999999999997 99999754221 11111111000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhh
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRET 848 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 848 (854)
. .....++..+.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 611 ~--------------------------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 611 L--------------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp C--------------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C--------------------------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 0 00112245688999999999999999999999999998764
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-37 Score=334.48 Aligned_cols=255 Identities=19% Similarity=0.279 Sum_probs=172.5
Q ss_pred HhhccccC-ccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHH-HHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSN-MIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAEC-EALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~-~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+ +||+|+||.||+|++..+++.||||++... ....+|+ ..++.++||||+++++++.... .+...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 100 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMH-HGKRC 100 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCce
Confidence 46899854 699999999999999999999999998643 2223333 3456679999999999987633 12235
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC---c-cccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---M-VAHQ 700 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~-~~~~ 700 (854)
.++||||+++|+|.+++...... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.+ + ++++
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~----~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQ----AFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeccCCCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 79999999999999999876422 689999999999999999999999 99999999999999753 3 3445
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||++......... ...||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ...
T Consensus 174 Dfg~~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~-~~~ 246 (336)
T 3fhr_A 174 DFGFAKETTQNALQ-----TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM-KR-RIR 246 (336)
T ss_dssp CCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------
T ss_pred ccccceeccccccc-----cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH-HH-hhh
Confidence 99999876543222 245899999999998888999999999999999999999999754322110000 00 000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
........ .....++..+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~-------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 247 LGQYGFPN-------------------PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ----CCCT-------------------TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccccCc-------------------hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00000000 000122456789999999999999999999987
No 272
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=338.29 Aligned_cols=275 Identities=19% Similarity=0.237 Sum_probs=197.5
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCC-CCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--GAFRSFVAECEALRNIRHRNLIKIITICSSIDSK-GADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 624 (854)
.+|.+.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+.++++++||||+++++++...... ....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 579999999999999999999998999999999965322 2346788999999999999999999998765421 1123
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFS 703 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg 703 (854)
.++||||++ ++|.+++.. .+++.++..++.||+.||+|||++ +|+||||||+||+++.++..++ |||
T Consensus 104 ~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred EEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 599999997 588887642 578999999999999999999999 9999999999999998876666 999
Q ss_pred cccccccCCCCCCcccccCCcccccCccccCC-CCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhc--CC
Q 043388 704 LSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG-SEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMT--LP 780 (854)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~--~~ 780 (854)
.+....... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+....... .+
T Consensus 172 ~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 244 (353)
T 3coi_A 172 LARHADAEM------TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPG 244 (353)
T ss_dssp CTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCC
T ss_pred cccCCCCCc------cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 998654332 22468999999999877 678999999999999999999999997543211 111111111 11
Q ss_pred cccccccCchhhHHHhhccch-hhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSM-IQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
..+...+.............. ....-......++..+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111111111111111000000 0000000112235678899999999999999999999863
No 273
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2e-37 Score=332.55 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=195.1
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc------chHHHHHHHHHHHhcc--CCCeeeEEEEeeccC
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG------AFRSFVAECEALRNIR--HRNLIKIITICSSID 618 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~ 618 (854)
.++|++.+.||+|+||.||+|++..+++.||||+++..... ..+.+.+|+.++++++ |+||+++++++...+
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 46899999999999999999999989999999999754321 2245678999999996 599999999997655
Q ss_pred CCCCceeeEEEeeccC-CCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEec-CCc
Q 043388 619 SKGADFKALVFEYMEN-GSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDM 696 (854)
Q Consensus 619 ~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~ 696 (854)
..++||||+.+ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++ .++
T Consensus 122 -----~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~ 187 (320)
T 3a99_A 122 -----SFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRG 187 (320)
T ss_dssp -----EEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTT
T ss_pred -----cEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCC
Confidence 68999999976 89999998754 689999999999999999999999 999999999999998 555
Q ss_pred cccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHH
Q 043388 697 VAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEF 774 (854)
Q Consensus 697 ~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~ 774 (854)
..++ |||++......... ...||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... ..
T Consensus 188 ~~kL~Dfg~~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~ 255 (320)
T 3a99_A 188 ELKLIDFGSGALLKDTVYT-----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EI 255 (320)
T ss_dssp EEEECCCTTCEECCSSCBC-----CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH
T ss_pred CEEEeeCcccccccccccc-----CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hh
Confidence 5555 99999877543221 2469999999999877665 788999999999999999999997421 11
Q ss_pred hhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 775 VKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 775 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
...... .. ..++.++.+++.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~------~~----------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 IRGQVF------FR----------------------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHCCCC------CS----------------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hccccc------cc----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111000 00 011345788999999999999999999987
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.5e-37 Score=331.37 Aligned_cols=257 Identities=21% Similarity=0.249 Sum_probs=175.4
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc-cchHHHHHHHH-HHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-GAFRSFVAECE-ALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
++|.+.+.||+|+||.||+|.+..+++.||||+++.... .....+.+|+. +++.++||||+++++++...+ ..
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~-----~~ 96 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-----DC 96 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-----EE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-----ce
Confidence 689999999999999999999998999999999975432 23345566666 667779999999999997655 68
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSL 704 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~ 704 (854)
++||||+++ +|.+++...... ....+++..+..++.|++.||+|||+.. +|+||||||+||+++.++..++ |||+
T Consensus 97 ~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~ 172 (327)
T 3aln_A 97 WICMELMST-SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGI 172 (327)
T ss_dssp EEEECCCSE-EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSS
T ss_pred EEEEeecCC-ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCC
Confidence 999999986 888887642110 0126899999999999999999999953 8999999999999998887776 9999
Q ss_pred ccccccCCCCCCcccccCCcccccCcccc----CCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYG----MGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
++........ ....||+.|+|||++ .+..++.++|||||||++|||++|+.||........... ....
T Consensus 173 ~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~----~~~~ 244 (327)
T 3aln_A 173 SGQLVDSIAK----TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT----QVVK 244 (327)
T ss_dssp SCC----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C----CCCC
T ss_pred ceeccccccc----ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH----HHhc
Confidence 9876543222 123589999999998 456689999999999999999999999975322111111 1111
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
........ . ....++..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~-~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 GDPPQLSN-S------------------EEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp SCCCCCCC-C------------------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCC-c------------------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00000000 0 00012456889999999999999999999976
No 275
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.1e-37 Score=338.37 Aligned_cols=276 Identities=17% Similarity=0.255 Sum_probs=199.1
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-----------CCCeeeEEEEeec
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-----------HRNLIKIITICSS 616 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~~ 616 (854)
.+|.+.+.||+|+||.||+|++..+++.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 58999999999999999999998899999999996432 23467889999999886 8999999999876
Q ss_pred cCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC-
Q 043388 617 IDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD- 695 (854)
Q Consensus 617 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~- 695 (854)
.+. .....++||||+ +++|.+++...... .+++..+..++.||+.||+|||+++ +|+||||||+||+++.+
T Consensus 98 ~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 98 KGP-NGVHVVMVFEVL-GENLLALIKKYEHR----GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EET-TEEEEEEEECCC-CEEHHHHHHHTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred cCC-CCceEEEEEecC-CCCHHHHHHHhhcc----CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 432 223689999999 88999999875422 5899999999999999999999954 89999999999999532
Q ss_pred -----cccc-cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCC-
Q 043388 696 -----MVAH-QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEG- 768 (854)
Q Consensus 696 -----~~~~-~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~- 768 (854)
...+ +|||++........ ...||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 243 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEHYT------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 243 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBCCC------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CCcCcceEEEcccccccccCCCCC------CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCccccc
Confidence 2344 49999987754322 2368999999999999999999999999999999999999998543211
Q ss_pred ----chHhHHhhhc--CCcccccccCchhhHHHhh----------c----cchhhHhhhhhHHHHHHHHHHHhhcccCCC
Q 043388 769 ----LTLHEFVKMT--LPEKVIEIVDPSLLMEVMA----------N----NSMIQEDRRARTQDCLNAITRTGVLCSMES 828 (854)
Q Consensus 769 ----~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~----------~----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 828 (854)
..+....... .+..+.. +......... . ..............+..++.+++.+||+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 321 (373)
T 1q8y_A 244 TKDDDHIAQIIELLGELPSYLLR--NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 321 (373)
T ss_dssp -CHHHHHHHHHHHHCSCCHHHHH--HCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSS
T ss_pred CChHHHHHHHHHhcCCCCHHHHh--ccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccC
Confidence 1111111110 0000000 0000000000 0 000000111122456778999999999999
Q ss_pred CCCCCCHHHHHH
Q 043388 829 PFERMEMRDVVA 840 (854)
Q Consensus 829 P~~RPs~~evl~ 840 (854)
|++|||+.|+++
T Consensus 322 P~~Rpt~~ell~ 333 (373)
T 1q8y_A 322 PRKRADAGGLVN 333 (373)
T ss_dssp TTTCBCHHHHHT
T ss_pred ccccCCHHHHhh
Confidence 999999999987
No 276
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.2e-36 Score=332.39 Aligned_cols=271 Identities=18% Similarity=0.220 Sum_probs=196.6
Q ss_pred hhccccCccCCCcceEEEEeEECCCc-eEEEEEEeecccccchHHHHHHHHHHHhccCCC------eeeEEEEeeccCCC
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEE-MIVAVKVINLKQKGAFRSFVAECEALRNIRHRN------LIKIITICSSIDSK 620 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~~~~~ 620 (854)
++|.+.+.||+|+||.||+|.+..++ ..||+|+++... ...+.+.+|+.++++++|++ ++.+++++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-- 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG-- 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--
Confidence 68999999999999999999997666 799999996432 33467889999999997766 899999887655
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe--------
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL-------- 692 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll-------- 692 (854)
..++||||+ ++++.+++...... .+++.+++.++.||+.||+|||+. +|+||||||+||++
T Consensus 96 ---~~~lv~e~~-~~~l~~~l~~~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 96 ---HMCIAFELL-GKNTFEFLKENNFQ----PYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp ---EEEEEEECC-CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ---eEEEEEecc-CCChHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccc
Confidence 789999999 66787877765321 689999999999999999999999 99999999999999
Q ss_pred -----------cCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 043388 693 -----------DHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRP 760 (854)
Q Consensus 693 -----------~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~p 760 (854)
+.++..++ |||.+........ ...||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p 238 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT------TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL 238 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTSCCC------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ccccccccccccCCCcEEEeecCcccccccccc------CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCC
Confidence 34455555 9999986543322 24699999999999999999999999999999999999999
Q ss_pred CCCcccCCchHhHHhh--hcCCcccccc-------------cCch--hhHHHhhccchhhHhhhhhHHHHHHHHHHHhhc
Q 043388 761 TDAAFTEGLTLHEFVK--MTLPEKVIEI-------------VDPS--LLMEVMANNSMIQEDRRARTQDCLNAITRTGVL 823 (854)
Q Consensus 761 f~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 823 (854)
|....... ....... ...+..+... .+.. ........+.... ........+..++.+++.+
T Consensus 239 f~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~ 316 (355)
T 2eu9_A 239 FQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK-SYMLQDSLEHVQLFDLMRR 316 (355)
T ss_dssp CCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGG-GGCSCCSHHHHHHHHHHHH
T ss_pred CCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccc-ccccccchhHHHHHHHHHH
Confidence 98543211 1111111 1111110000 0000 0000000000000 0000112235678899999
Q ss_pred ccCCCCCCCCCHHHHHH
Q 043388 824 CSMESPFERMEMRDVVA 840 (854)
Q Consensus 824 cl~~dP~~RPs~~evl~ 840 (854)
||+.||++|||+.|+++
T Consensus 317 ~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 317 MLEFDPAQRITLAEALL 333 (355)
T ss_dssp HTCSSTTTSCCHHHHTT
T ss_pred HhcCChhhCcCHHHHhc
Confidence 99999999999999985
No 277
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=9.9e-37 Score=320.77 Aligned_cols=234 Identities=12% Similarity=0.116 Sum_probs=183.2
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.++.+++||||+++++++...+ .
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA-----G 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----E
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC-----c
Confidence 579999999999999999999998899999999975432 23467899999999999999999999997755 6
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccccccc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQNFSL 704 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~Dfg~ 704 (854)
.|+||||++|++|.+++... ....++.+|+.|++.||+|||++ +|+||||||+||+++.++..+++|+
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~- 173 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP- 173 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC-
T ss_pred EEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec-
Confidence 89999999999999998542 24456888999999999999999 9999999999999999887777532
Q ss_pred ccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccc
Q 043388 705 SHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVI 784 (854)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 784 (854)
+|++| ++.++|||||||++|||+||+.||............ . ......
T Consensus 174 ---------------------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-~-~~~~~~-- 221 (286)
T 3uqc_A 174 ---------------------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-E-RDTAGQ-- 221 (286)
T ss_dssp ---------------------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-C-BCTTSC--
T ss_pred ---------------------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-H-HHhccC--
Confidence 34443 789999999999999999999999865332110000 0 000000
Q ss_pred cccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHHHHhhhhhh
Q 043388 785 EIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAKLCHTRETF 849 (854)
Q Consensus 785 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 849 (854)
...+ ......++..+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 222 -~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 222 -PIEP-----------------ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp -BCCH-----------------HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred -CCCh-----------------hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 0000 00111235668899999999999999 9999999999987544
No 278
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=329.28 Aligned_cols=243 Identities=23% Similarity=0.328 Sum_probs=189.1
Q ss_pred HHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc------cchHHHHHHHHHHHhc----cCCCeeeEEEE
Q 043388 544 SKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK------GAFRSFVAECEALRNI----RHRNLIKIITI 613 (854)
Q Consensus 544 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~~~~~ 613 (854)
....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 3446789999999999999999999988999999999965432 1223456799999999 89999999999
Q ss_pred eeccCCCCCceeeEEEee-ccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEe
Q 043388 614 CSSIDSKGADFKALVFEY-MENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLL 692 (854)
Q Consensus 614 ~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll 692 (854)
+...+ ..++|||| +++++|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~-----~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 172 (312)
T 2iwi_A 107 FETQE-----GFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILI 172 (312)
T ss_dssp C----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEE
T ss_pred EecCC-----eEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEE
Confidence 87654 57999999 78999999998754 689999999999999999999999 99999999999999
Q ss_pred c-CCccccc-ccccccccccCCCCCCcccccCCcccccCccccCCCCC-CccchhHHHHHHHHHHHhCCCCCCCcccCCc
Q 043388 693 D-HDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEA-SMTGDVYSFGILLLEMFTGRRPTDAAFTEGL 769 (854)
Q Consensus 693 ~-~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDv~slGvvl~elltg~~pf~~~~~~~~ 769 (854)
+ .++..++ |||.+........ ....||..|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 173 ~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---- 243 (312)
T 2iwi_A 173 DLRRGCAKLIDFGSGALLHDEPY-----TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ---- 243 (312)
T ss_dssp ETTTTEEEECCCSSCEECCSSCB-----CCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----
T ss_pred eCCCCeEEEEEcchhhhcccCcc-----cccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----
Confidence 8 6665555 9999987754322 22468999999999877665 458999999999999999999997421
Q ss_pred hHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 770 TLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
+....... . . ..+...+.+++.+||+.||++|||+.|+++
T Consensus 244 ---~~~~~~~~--~----~----------------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 ---EILEAELH--F----P----------------------AHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ---HHHHTCCC--C----C----------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ---HHhhhccC--C----c----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111000 0 0 011345778999999999999999999987
No 279
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.6e-37 Score=341.24 Aligned_cols=255 Identities=21% Similarity=0.258 Sum_probs=181.6
Q ss_pred hccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCceeeE
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
.|.+.++||+|+||+||.+... +++.||||++.... .+.+.+|++++.++ +||||+++++++.+.. ..++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-----~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDR-----FLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-----EEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCC-----eEEE
Confidence 3555788999999999876554 78899999986432 35678999999987 8999999999987654 7899
Q ss_pred EEeeccCCCHHHHhhhcCCcccc-cccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----------
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEV-CKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---------- 696 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~-~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---------- 696 (854)
||||++ |+|.+++......... ...++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999996 5999999876432111 1123345678999999999999999 999999999999997642
Q ss_pred ---ccc-cccccccccccCCCCCC-cccccCCcccccCccccCC-------CCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 043388 697 ---VAH-QNFSLSHQLDSASKTPS-SSIGIKGTVGYVAPEYGMG-------SEASMTGDVYSFGILLLEMFT-GRRPTDA 763 (854)
Q Consensus 697 ---~~~-~Dfg~~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-------~~~~~~sDv~slGvvl~ellt-g~~pf~~ 763 (854)
..+ +|||+++.......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||..
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 344 49999998765432211 1223569999999999876 568999999999999999999 9999975
Q ss_pred cccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 764 AFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.... ...+............. ....++.++.+++.+||+.||.+|||+.||++
T Consensus 243 ~~~~---~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 243 KYSR---ESNIIRGIFSLDEMKCL---------------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTTH---HHHHHHTCCCCCCCTTC---------------------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred chhh---HHHHhcCCCCccccccc---------------------ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 4221 11122211111000000 01223567889999999999999999999985
No 280
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=326.04 Aligned_cols=252 Identities=19% Similarity=0.255 Sum_probs=177.9
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc-c-hHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG-A-FRSFVAECEALRNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+.+.||+|+||.||+|++..+++.||||++...... . .+.+.++..+++.++||||+++++++...+ .
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-----~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT-----D 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----E
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC-----c
Confidence 57899999999999999999999989999999999754322 2 233444555678889999999999997655 7
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHh-cCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
.++||||+ ++.+..+...... .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++..++ ||
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQG-----PIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecc-CCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 89999999 5566665544322 68999999999999999999998 6 8999999999999998877776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccC-----CCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhh
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM-----GSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKM 777 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~ 777 (854)
|.+......... ....||+.|+|||++. +..++.++|||||||++|||++|+.||................
T Consensus 170 g~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 245 (318)
T 2dyl_A 170 GISGRLVDDKAK----DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE 245 (318)
T ss_dssp TTC------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS
T ss_pred CCchhccCCccc----cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc
Confidence 999776543322 1245899999999984 4568899999999999999999999997532221112221111
Q ss_pred cCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 778 TLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 778 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
..+ .... ...++..+.+++.+||+.||.+|||+.|+++.
T Consensus 246 ~~~-~~~~------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 246 EPP-LLPG------------------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCC-CCCS------------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCC-CCCc------------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 110 0000 00114457889999999999999999999863
No 281
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-36 Score=348.00 Aligned_cols=277 Identities=22% Similarity=0.296 Sum_probs=196.1
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecc-cccchHHHHHHHHHHHhccCCCeeeEEEEeeccCC-CCCc
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLK-QKGAFRSFVAECEALRNIRHRNLIKIITICSSIDS-KGAD 623 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 623 (854)
..++|++.+.||+|+||.||+|.+..+++.||||+++.. .....+.+.+|++++++++||||+++++++..... ....
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 347899999999999999999999889999999998654 23345678999999999999999999999765221 1234
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCc----ccc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAH 699 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~~ 699 (854)
..++||||+++|+|.+++..... ...+++..++.|+.|++.||+|||+. +|+||||||+||+++.++ +++
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~---~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL 165 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKI 165 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC---TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred eEEEEEEeCCCCCHHHHHHhccc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEE
Confidence 67999999999999999987542 12578889999999999999999999 999999999999998765 344
Q ss_pred cccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcC
Q 043388 700 QNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTL 779 (854)
Q Consensus 700 ~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~ 779 (854)
+|||.+......... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...|.....
T Consensus 166 ~DFG~a~~~~~~~~~----~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~ 237 (676)
T 3qa8_A 166 IDLGYAKELDQGELC----TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVR 237 (676)
T ss_dssp CSCCCCCBTTSCCCC----CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC
T ss_pred ccccccccccccccc----ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhh
Confidence 599999877554322 234699999999999999999999999999999999999999975311 111111100
Q ss_pred Cccccc-ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHH
Q 043388 780 PEKVIE-IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDV 838 (854)
Q Consensus 780 ~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ev 838 (854)
...... .............. ..+........++..+.+++..||++||++|||+.|+
T Consensus 238 ~~~~~~~~~~~~l~g~~~~~~--~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 238 EKSNEHIVVYDDLTGAVKFSS--VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ------CCSCCCCSSSCCCCS--SSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cccchhhhhhhhhcccccccc--ccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 00000000000000 0000000112235678899999999999999999884
No 282
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-36 Score=336.03 Aligned_cols=249 Identities=21% Similarity=0.296 Sum_probs=179.7
Q ss_pred hhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCceee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGADFKA 626 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 626 (854)
.+|.+.++||+|+||+||..... +++.||||++..... ..+.+|+++++++ +|||||++++++.+.. ..+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~-~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-----~~~ 94 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ-----FQY 94 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEES-SSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT-----EEE
T ss_pred EEEecCCeeecCcCEEEEEEEEe-CCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC-----EEE
Confidence 46888999999999996644333 688999999864332 2356899999999 8999999999987655 789
Q ss_pred EEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCC---c--cc-cc
Q 043388 627 LVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---M--VA-HQ 700 (854)
Q Consensus 627 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~--~~-~~ 700 (854)
+||||++ |+|.+++..... ...+.+++.++.||+.||+|||+. +|+||||||+||+++.+ + .+ ++
T Consensus 95 lv~E~~~-g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~ 165 (432)
T 3p23_A 95 IAIELCA-ATLQEYVEQKDF-----AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMIS 165 (432)
T ss_dssp EEEECCS-EEHHHHHHSSSC-----CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred EEEECCC-CCHHHHHHhcCC-----CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence 9999996 599999987643 334445678999999999999999 99999999999999532 2 23 45
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccC---CCCCCccchhHHHHHHHHHHHh-CCCCCCCcccCCchHhHHhh
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGM---GSEASMTGDVYSFGILLLEMFT-GRRPTDAAFTEGLTLHEFVK 776 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDv~slGvvl~ellt-g~~pf~~~~~~~~~~~~~~~ 776 (854)
|||+++................||+.|+|||++. +..++.++|||||||++|||++ |..||...... ......
T Consensus 166 DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~~~~~~ 242 (432)
T 3p23_A 166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---QANILL 242 (432)
T ss_dssp CTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---HHHHHT
T ss_pred cccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---HHHHHh
Confidence 9999988765543333334467999999999987 4567889999999999999999 99998543211 111111
Q ss_pred hcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHH
Q 043388 777 MTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVA 840 (854)
Q Consensus 777 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 840 (854)
.... .....+. ......+.+++.+||+.||++|||+.||++
T Consensus 243 ~~~~---~~~~~~~--------------------~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 243 GACS---LDCLHPE--------------------KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TCCC---CTTSCTT--------------------CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCC---ccccCcc--------------------ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1000 0000100 111344678999999999999999999984
No 283
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.1e-36 Score=356.22 Aligned_cols=246 Identities=22% Similarity=0.338 Sum_probs=196.0
Q ss_pred hhccccCccCCCcceEEEEeEECC-CceEEEEEEeeccc-ccchHHHHHHHHHHHhccCCCeeeEEEEeeccCCCCCcee
Q 043388 548 SEFASSNMIGQGSFGSVYKGILGG-EEMIVAVKVINLKQ-KGAFRSFVAECEALRNIRHRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 548 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 625 (854)
++|++.++||+|+||.||+|.+.. +++.||||++.... ......+.+|++++++++||||+++++++...+..+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999975 68999999986433 2344578899999999999999999999987664444447
Q ss_pred eEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccccccccc
Q 043388 626 ALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQNFSLS 705 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~Dfg~~ 705 (854)
|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||++ +|+||||||+||+++.+.++++|||++
T Consensus 160 ~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~~~kl~DFG~a 228 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEEQLKLIDLGAV 228 (681)
T ss_dssp EEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCCcEEEEecccc
Confidence 999999999999887653 578999999999999999999999 999999999999999987777799999
Q ss_pred cccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCCccccc
Q 043388 706 HQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIE 785 (854)
Q Consensus 706 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 785 (854)
+..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||........ +.
T Consensus 229 ~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~---- 286 (681)
T 2pzi_A 229 SRINSF-------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PE---- 286 (681)
T ss_dssp EETTCC-------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CT----
T ss_pred hhcccC-------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc----------cc----
Confidence 876543 124699999999998765 48999999999999999999998764321110 00
Q ss_pred ccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCC-HHHHHHHHHhhhh
Q 043388 786 IVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERME-MRDVVAKLCHTRE 847 (854)
Q Consensus 786 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~L~~~~~ 847 (854)
.. ........+.+++.+||+.||++||+ ++++...+..+..
T Consensus 287 -~~--------------------~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 287 -DD--------------------PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp -TC--------------------HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred -cc--------------------cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 00 00112356789999999999999995 6667776766543
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-34 Score=319.96 Aligned_cols=289 Identities=19% Similarity=0.258 Sum_probs=186.3
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.++++++|++++|.++...+..|..+++|++|+|++|++++..+..|+.+++|++|+|++|.++++.|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 45788999999999985555557888999999999999988777889999999999999999998888888999999999
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcC
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSID 173 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~ 173 (854)
+|++|+|+ .+|..+|.++++|++|++++|+++.+ .|..|.++++|++|+|++|+++++ .
T Consensus 123 ~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~~~l~~L~~L~l~~n~l~~~---~ 181 (390)
T 3o6n_A 123 VLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERI-----------------EDDTFQATTSLQNLQLSSNRLTHV---D 181 (390)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBC-----------------CTTTTSSCTTCCEEECCSSCCSBC---C
T ss_pred ECCCCccC-cCCHHHhcCCCCCcEEECCCCccCcc-----------------ChhhccCCCCCCEEECCCCcCCcc---c
Confidence 99999998 88888888888888888887765422 234455566666666666665544 2
Q ss_pred ccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccc
Q 043388 174 FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGI 253 (854)
Q Consensus 174 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~ 253 (854)
+..+++|+.|++++|.++.+ ...++|+.|++++|.++. +|... .+.|+.|++++|.+++. ..+
T Consensus 182 ~~~l~~L~~L~l~~n~l~~~-----------~~~~~L~~L~l~~n~l~~-~~~~~---~~~L~~L~l~~n~l~~~--~~l 244 (390)
T 3o6n_A 182 LSLIPSLFHANVSYNLLSTL-----------AIPIAVEELDASHNSINV-VRGPV---NVELTILKLQHNNLTDT--AWL 244 (390)
T ss_dssp GGGCTTCSEEECCSSCCSEE-----------ECCSSCSEEECCSSCCCE-EECCC---CSSCCEEECCSSCCCCC--GGG
T ss_pred cccccccceeeccccccccc-----------CCCCcceEEECCCCeeee-ccccc---cccccEEECCCCCCccc--HHH
Confidence 34455555555555555422 222345555555555552 22221 12455555555555532 345
Q ss_pred cccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcc
Q 043388 254 RNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKG 333 (854)
Q Consensus 254 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 333 (854)
..+++|++|+|++|+++++.|..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.
T Consensus 245 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 245 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred cCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 555555555555555555555555555555555555555553 3444445555555555555555 34444455555555
Q ss_pred cccCCCccc
Q 043388 334 FDASHNKLT 342 (854)
Q Consensus 334 L~ls~N~l~ 342 (854)
|++++|+++
T Consensus 323 L~L~~N~i~ 331 (390)
T 3o6n_A 323 LYLDHNSIV 331 (390)
T ss_dssp EECCSSCCC
T ss_pred EECCCCccc
Confidence 555555554
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.8e-34 Score=313.75 Aligned_cols=298 Identities=24% Similarity=0.350 Sum_probs=196.0
Q ss_pred hhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCC
Q 043388 11 EIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSL 90 (854)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 90 (854)
.+..+++|++|++++|.++ .+|. ++.+++|++|++++|++++. +. |..+++|++|+|++|.++++ | +|.++++|
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~-~-~~~~l~~L 112 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI-S-ALQNLTNL 112 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC-G-GGTTCTTC
T ss_pred cchhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc-h-HHcCCCcC
Confidence 4568899999999999998 4554 89999999999999999954 44 99999999999999999963 4 69999999
Q ss_pred ceeeecccccccccCcccccCCCCCcEEEcccCC----------CCCCceeeccCccCCCCCCCCCCccccCCCCCCEEe
Q 043388 91 EFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCS----------LKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLD 160 (854)
Q Consensus 91 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~----------l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~ 160 (854)
++|+|++|+++ .++. +..+++|++|++++|. +++|+.|++++|.+. .++. +..+++|++|+
T Consensus 113 ~~L~l~~n~i~-~~~~--~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~-----~~~~-~~~l~~L~~L~ 183 (347)
T 4fmz_A 113 RELYLNEDNIS-DISP--LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVK-----DVTP-IANLTDLYSLS 183 (347)
T ss_dssp SEEECTTSCCC-CCGG--GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCC-----CCGG-GGGCTTCSEEE
T ss_pred CEEECcCCccc-Cchh--hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcC-----Cchh-hccCCCCCEEE
Confidence 99999999998 6665 8899999999998883 345556666665552 2222 55556666666
Q ss_pred cCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEc
Q 043388 161 LSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRI 240 (854)
Q Consensus 161 Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l 240 (854)
+++|++.++.+ +..+++|++|++++|.+.... .+..+++|++|++++|.+++ +|. +..++ .|+.|++
T Consensus 184 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--------~~~~~~~L~~L~l~~n~l~~-~~~-~~~l~-~L~~L~l 250 (347)
T 4fmz_A 184 LNYNQIEDISP--LASLTSLHYFTAYVNQITDIT--------PVANMTRLNSLKIGNNKITD-LSP-LANLS-QLTWLEI 250 (347)
T ss_dssp CTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCG--------GGGGCTTCCEEECCSSCCCC-CGG-GTTCT-TCCEEEC
T ss_pred ccCCccccccc--ccCCCccceeecccCCCCCCc--------hhhcCCcCCEEEccCCccCC-Ccc-hhcCC-CCCEEEC
Confidence 66666654443 555566666666666554322 14455566666666666653 222 44443 5666666
Q ss_pred cCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceeccc
Q 043388 241 GGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGN 320 (854)
Q Consensus 241 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 320 (854)
++|.+++. +.+..+++|++|++++|+++++ +.+..+++|+.|++++|++++..|..+..+++|+.|++++|++++.
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 66665532 3455556666666666665543 3455556666666666666555555555666666666666666544
Q ss_pred CCCCCcCCCCCcccccCCCccc
Q 043388 321 IPSSLGNCQNLKGFDASHNKLT 342 (854)
Q Consensus 321 ~~~~~~~l~~L~~L~ls~N~l~ 342 (854)
.| +..+++|+.|++++|.++
T Consensus 327 ~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 327 RP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GG--GGGCTTCSEESSSCC---
T ss_pred cC--hhhhhccceeehhhhccc
Confidence 33 555566666666666553
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2.2e-34 Score=313.18 Aligned_cols=307 Identities=24% Similarity=0.386 Sum_probs=194.6
Q ss_pred ccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCC
Q 043388 36 VGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNL 115 (854)
Q Consensus 36 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 115 (854)
+..+++|++|++++|.++ .++. |..+++|++|+|++|+++++.+ |.++++|++|+|++|+++ .+| .|.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~-~~~--~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT-DIS--ALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG--GGTTCTTC
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc-Cch--HHcCCCcC
Confidence 345566666666666666 3333 6666666666666666664333 666666666666666665 343 24555555
Q ss_pred cEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCC
Q 043388 116 KELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTA 195 (854)
Q Consensus 116 ~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~ 195 (854)
++|++++|.+..+ |. +.++++|++|++++|......+ .+..+++|++|++++|.+.....
T Consensus 113 ~~L~l~~n~i~~~------------------~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~ 172 (347)
T 4fmz_A 113 RELYLNEDNISDI------------------SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP 172 (347)
T ss_dssp SEEECTTSCCCCC------------------GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG
T ss_pred CEEECcCCcccCc------------------hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh
Confidence 5555544444322 22 4555555555555554332222 24455555555555554432211
Q ss_pred CChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCC
Q 043388 196 NDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPD 275 (854)
Q Consensus 196 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 275 (854)
+..++ .|+.|++++|.+++..+ +..+++|+.|++++|++++..+
T Consensus 173 --------~~~l~-------------------------~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 216 (347)
T 4fmz_A 173 --------IANLT-------------------------DLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP- 216 (347)
T ss_dssp --------GGGCT-------------------------TCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred --------hccCC-------------------------CCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-
Confidence 33344 45555555555543322 6666777777777777775544
Q ss_pred CccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhh
Q 043388 276 GVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTL 355 (854)
Q Consensus 276 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l 355 (854)
+..+++|++|++++|++++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++ +|.
T Consensus 217 -~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-------- 282 (347)
T 4fmz_A 217 -VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-ISV-------- 282 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CGG--------
T ss_pred -hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-Chh--------
Confidence 6777777777777777774433 77778888888888887743 467788888888888888873 211
Q ss_pred HHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCC
Q 043388 356 SVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFL 435 (854)
Q Consensus 356 ~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 435 (854)
+.. +++|++|++++|++++..|..++.+++|++|+|++|++++..| +..+++|
T Consensus 283 ------------------~~~-------l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 283 ------------------LNN-------LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp ------------------GGG-------CTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred ------------------hcC-------CCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 111 4568899999999988888888999999999999999997666 8889999
Q ss_pred CeeecccccCc
Q 043388 436 EFLNLSYNHLE 446 (854)
Q Consensus 436 ~~L~ls~N~l~ 446 (854)
+.|++++|+++
T Consensus 336 ~~L~l~~N~i~ 346 (347)
T 4fmz_A 336 DSADFANQVIK 346 (347)
T ss_dssp SEESSSCC---
T ss_pred ceeehhhhccc
Confidence 99999999875
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-34 Score=310.93 Aligned_cols=298 Identities=18% Similarity=0.254 Sum_probs=239.7
Q ss_pred cCchhhhcC------CCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 7 QIPEEIGSL------LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 7 ~~p~~~~~l------~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
.+|..+... .+++++++++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|+++.
T Consensus 18 ~lp~~~~~~cp~~c~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 94 (332)
T 2ft3_A 18 SLPPTYSAMCPFGCHCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94 (332)
T ss_dssp -------CCCCSSCEEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred cCCCcccCCCCCCCcccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccC
Confidence 456555443 47999999999998 6787764 68999999999999888889999999999999999999888
Q ss_pred hhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEe
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLD 160 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~ 160 (854)
|.+|+++++|++|+|++|+++ .+|..++ ++|++|++++|+++.+ .+..|.++++|++|+
T Consensus 95 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~-----------------~~~~~~~l~~L~~L~ 153 (332)
T 2ft3_A 95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKV-----------------PKGVFSGLRNMNCIE 153 (332)
T ss_dssp GGGSTTCTTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCC-----------------CSGGGSSCSSCCEEE
T ss_pred HhHhhCcCCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCcc-----------------CHhHhCCCccCCEEE
Confidence 999999999999999999998 8887765 6677777766665433 245688899999999
Q ss_pred cCCCcCcc--cCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEE
Q 043388 161 LSGNQFKG--KVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQF 238 (854)
Q Consensus 161 Ls~N~i~~--~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L 238 (854)
+++|+++. ..+..|..+ +|++|++++|+++.++.. + .++|++|++++|.+++..|..+..+. .|+.|
T Consensus 154 l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~-------~--~~~L~~L~l~~n~i~~~~~~~l~~l~-~L~~L 222 (332)
T 2ft3_A 154 MGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKD-------L--PETLNELHLDHNKIQAIELEDLLRYS-KLYRL 222 (332)
T ss_dssp CCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSS-------S--CSSCSCCBCCSSCCCCCCTTSSTTCT-TCSCC
T ss_pred CCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcc-------c--cCCCCEEECCCCcCCccCHHHhcCCC-CCCEE
Confidence 99999963 778888888 999999999999876553 1 26888999999999877777788776 78899
Q ss_pred EccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCc------cccchhcc
Q 043388 239 RIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNL------TKLADLAL 312 (854)
Q Consensus 239 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L 312 (854)
++++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|... ..|+.|++
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l 301 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISL 301 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEEC
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEe
Confidence 99999998888888888999999999999988 567778888999999999999987777777653 56888899
Q ss_pred ccceec--ccCCCCCcCCCCCcccccCCCc
Q 043388 313 SFNNLQ--GNIPSSLGNCQNLKGFDASHNK 340 (854)
Q Consensus 313 ~~N~l~--~~~~~~~~~l~~L~~L~ls~N~ 340 (854)
++|.+. +..|.+|..+++|+.+++++|+
T Consensus 302 ~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 302 FNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecCcccccccCcccccccchhhhhhccccc
Confidence 999887 5677888888999999888875
No 288
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.7e-34 Score=307.32 Aligned_cols=291 Identities=19% Similarity=0.229 Sum_probs=245.9
Q ss_pred CCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceee
Q 043388 15 LLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIY 94 (854)
Q Consensus 15 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 94 (854)
..++++++++++.++ .+|..+. ++|++|+|++|+|++..+..|+.+++|++|+|++|+++++.|.+|.++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 458999999999998 6787665 6899999999999988788999999999999999999988899999999999999
Q ss_pred ecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcc--cCCc
Q 043388 95 LTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKG--KVSI 172 (854)
Q Consensus 95 L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~--~~~~ 172 (854)
|++|+|+ .+|..++ ++|++|++++|++..+ .+..|.++++|++|+|++|+++. +.+.
T Consensus 107 Ls~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~-----------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 165 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP---KTLQELRVHENEITKV-----------------RKSVFNGLNQMIVVELGTNPLKSSGIENG 165 (330)
T ss_dssp CCSSCCS-BCCSSCC---TTCCEEECCSSCCCBB-----------------CHHHHTTCTTCCEEECCSSCCCGGGBCTT
T ss_pred CCCCcCC-ccChhhc---ccccEEECCCCccccc-----------------CHhHhcCCccccEEECCCCcCCccCcChh
Confidence 9999998 8887665 5677777766665433 34568999999999999999964 7788
Q ss_pred CccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcc
Q 043388 173 DFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSG 252 (854)
Q Consensus 173 ~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~ 252 (854)
.|..+++|++|++++|.++.++.. + .++|++|++++|++++..|..+..+. .|+.|++++|.+++..+..
T Consensus 166 ~~~~l~~L~~L~l~~n~l~~l~~~-------~--~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~ 235 (330)
T 1xku_A 166 AFQGMKKLSYIRIADTNITTIPQG-------L--PPSLTELHLDGNKITKVDAASLKGLN-NLAKLGLSFNSISAVDNGS 235 (330)
T ss_dssp GGGGCTTCCEEECCSSCCCSCCSS-------C--CTTCSEEECTTSCCCEECTGGGTTCT-TCCEEECCSSCCCEECTTT
T ss_pred hccCCCCcCEEECCCCccccCCcc-------c--cccCCEEECCCCcCCccCHHHhcCCC-CCCEEECCCCcCceeChhh
Confidence 899999999999999999876653 1 27899999999999987788888886 7999999999999888888
Q ss_pred ccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCc------cccchhccccceecc--cCCCC
Q 043388 253 IRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNL------TKLADLALSFNNLQG--NIPSS 324 (854)
Q Consensus 253 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~ 324 (854)
|..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..|... +.|+.|++++|.+.. ..|..
T Consensus 236 ~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~ 314 (330)
T 1xku_A 236 LANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPST 314 (330)
T ss_dssp GGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGG
T ss_pred ccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccc
Confidence 999999999999999998 567788999999999999999997777777543 678889999999863 56778
Q ss_pred CcCCCCCcccccCCCc
Q 043388 325 LGNCQNLKGFDASHNK 340 (854)
Q Consensus 325 ~~~l~~L~~L~ls~N~ 340 (854)
|..+.+++.+++++|+
T Consensus 315 f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 315 FRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GTTCCCGGGEEC----
T ss_pred cccccceeEEEecccC
Confidence 8889999999999885
No 289
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2e-34 Score=336.10 Aligned_cols=311 Identities=20% Similarity=0.252 Sum_probs=217.7
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.+.+++.|++++|.++...+..|+.+++|++|+|++|.|++..|..|+.+++|++|+|++|.|+++.|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35788889999998886666667888889999999999988888888889999999999999988888888889999999
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcC
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSID 173 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~ 173 (854)
+|++|+|+ .+|..+|.++++|++|++++|.+..+ .|..|.++++|++|+|++|+|+++.
T Consensus 129 ~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~~~~~~~l~~L~~L~L~~N~l~~~~--- 187 (597)
T 3oja_B 129 VLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERI-----------------EDDTFQATTSLQNLQLSSNRLTHVD--- 187 (597)
T ss_dssp ECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBC-----------------CTTTTTTCTTCCEEECTTSCCSBCC---
T ss_pred EeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCC-----------------ChhhhhcCCcCcEEECcCCCCCCcC---
Confidence 99999988 88888888888888888887766432 3456677777777777777776553
Q ss_pred ccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccc
Q 043388 174 FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGI 253 (854)
Q Consensus 174 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~ 253 (854)
+..+++|+.|++++|.++. +...++|+.|++++|.++. +|..+. +.|+.|+|++|.+++ +..+
T Consensus 188 ~~~l~~L~~L~l~~n~l~~-----------l~~~~~L~~L~ls~n~l~~-~~~~~~---~~L~~L~L~~n~l~~--~~~l 250 (597)
T 3oja_B 188 LSLIPSLFHANVSYNLLST-----------LAIPIAVEELDASHNSINV-VRGPVN---VELTILKLQHNNLTD--TAWL 250 (597)
T ss_dssp GGGCTTCSEEECCSSCCSE-----------EECCTTCSEEECCSSCCCE-EECSCC---SCCCEEECCSSCCCC--CGGG
T ss_pred hhhhhhhhhhhcccCcccc-----------ccCCchhheeeccCCcccc-cccccC---CCCCEEECCCCCCCC--Chhh
Confidence 4556667777777776653 2234566777777776663 332221 356667777777664 3556
Q ss_pred cccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcc
Q 043388 254 RNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKG 333 (854)
Q Consensus 254 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 333 (854)
..+++|+.|+|++|.++++.|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.
T Consensus 251 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~ 328 (597)
T 3oja_B 251 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328 (597)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCE
Confidence 667777777777777766666667777777777777777764 4555566667777777777766 45556666677777
Q ss_pred cccCCCcccCccchhhcchhhhHHHHHhhcCCCCC
Q 043388 334 FDASHNKLTGAIPQQVLSITTLSVYLALAHNLLND 368 (854)
Q Consensus 334 L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~ 368 (854)
|++++|.+++. | +..+..+.. +++++|.+..
T Consensus 329 L~L~~N~l~~~-~--~~~~~~L~~-L~l~~N~~~~ 359 (597)
T 3oja_B 329 LYLDHNSIVTL-K--LSTHHTLKN-LTLSHNDWDC 359 (597)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSE-EECCSSCEEH
T ss_pred EECCCCCCCCc-C--hhhcCCCCE-EEeeCCCCCC
Confidence 77777776643 2 222223322 6666666553
No 290
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-35 Score=328.25 Aligned_cols=250 Identities=15% Similarity=0.171 Sum_probs=180.5
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc---cchHHHHHHHHHHHhccC-CCe---------e-----
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK---GAFRSFVAECEALRNIRH-RNL---------I----- 608 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~ni---------v----- 608 (854)
...|...++||+|+||.||+|++..+++.||||+++.... ...+.+.+|+.+++.++| +|. +
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3468888999999999999999998999999999874322 236789999999999977 221 1
Q ss_pred -------eEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCC-cccccccCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 043388 609 -------KIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSND-HLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPI 680 (854)
Q Consensus 609 -------~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~i 680 (854)
.+..++...........+++|+++ +++|.+++..... ......+++..++.|+.||+.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 111111111111122356777766 5799999853210 00122688899999999999999999999 99
Q ss_pred EeecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCcccc----------CCCCCCccchhHHHHH
Q 043388 681 VHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYG----------MGSEASMTGDVYSFGI 749 (854)
Q Consensus 681 vH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDv~slGv 749 (854)
+||||||+|||++.++..++ |||+++...... ...+| +.|+|||++ .+..++.++|||||||
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA------VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEEE------CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCcc------ccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 99999999999999877776 999988765442 22457 999999998 5566899999999999
Q ss_pred HHHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCC
Q 043388 750 LLLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESP 829 (854)
Q Consensus 750 vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 829 (854)
++|||+||+.||......... ....... ..++..+.+++.+||+.||
T Consensus 306 il~elltg~~Pf~~~~~~~~~-----~~~~~~~----------------------------~~~~~~~~~li~~~l~~dP 352 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDAALGGS-----EWIFRSC----------------------------KNIPQPVRALLEGFLRYPK 352 (413)
T ss_dssp HHHHHHHSSCCCCTTGGGSCS-----GGGGSSC----------------------------CCCCHHHHHHHHHHTCSSG
T ss_pred HHHHHHHCCCCCCCcchhhhH-----HHHHhhc----------------------------ccCCHHHHHHHHHHccCCh
Confidence 999999999999754321110 0000000 0113558899999999999
Q ss_pred CCCCCHHHHHH
Q 043388 830 FERMEMRDVVA 840 (854)
Q Consensus 830 ~~RPs~~evl~ 840 (854)
++|||+.|+++
T Consensus 353 ~~Rpt~~~~l~ 363 (413)
T 3dzo_A 353 EDRLLPLQAME 363 (413)
T ss_dssp GGSCCHHHHTT
T ss_pred hhCcCHHHHHh
Confidence 99999888754
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.6e-35 Score=308.69 Aligned_cols=236 Identities=17% Similarity=0.298 Sum_probs=177.9
Q ss_pred Hhhcccc-CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHH-HhccCCCeeeEEEEeeccCCCCCce
Q 043388 547 TSEFASS-NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEAL-RNIRHRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~ 624 (854)
.++|.+. +.||+|+||.||+|.+..+++.||+|+++.. ..+.+|+.++ +..+||||+++++++.... .+...
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 89 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY-AGRKC 89 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCce
Confidence 4678777 7899999999999999989999999998632 5677899888 5559999999999987522 11236
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecC---Cccccc-
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHQ- 700 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~~~- 700 (854)
.++||||+++|+|.+++...... .+++.+++.++.|++.||+|||+. +|+||||||+||+++. ++..++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred EEEEEeecCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 89999999999999999875422 689999999999999999999999 9999999999999997 555555
Q ss_pred ccccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCCCCCcccCCchHhHHhhhcCC
Q 043388 701 NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRPTDAAFTEGLTLHEFVKMTLP 780 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 780 (854)
|||++.... +..++.++||||+||++|||++|+.||........ .. ...
T Consensus 163 Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----~~-~~~ 211 (299)
T 3m2w_A 163 DFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----SP-GMK 211 (299)
T ss_dssp CCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------C-CSC
T ss_pred ccccccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----hH-HHH
Confidence 999886432 23467899999999999999999999975422110 00 000
Q ss_pred cccccccCchhhHHHhhccchhhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHHHH
Q 043388 781 EKVIEIVDPSLLMEVMANNSMIQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVVAK 841 (854)
Q Consensus 781 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 841 (854)
..... ..... .......++..+.+++.+||+.||++|||+.|+++.
T Consensus 212 ~~~~~-~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 212 TRIRM-GQYEF--------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CSSCT-TCCSS--------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhh-ccccC--------------CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000 00000 000111235668899999999999999999999873
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.1e-33 Score=305.35 Aligned_cols=245 Identities=20% Similarity=0.264 Sum_probs=164.9
Q ss_pred CCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEE
Q 043388 40 SALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELY 119 (854)
Q Consensus 40 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 119 (854)
.+++.+++++|.++ .+|..+. ++|++|+|++|.|+++.|.+|.++++|++|+|++|+|+ .++...|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS-KIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccC-ccCHhHhhCcCCCCEEE
Confidence 47999999999998 6777664 78999999999999888889999999999999999998 66667788888888888
Q ss_pred cccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChh
Q 043388 120 LTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLD 199 (854)
Q Consensus 120 l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~ 199 (854)
+++|+++.+ |..+. ++|++|+|++|+|+.+++..|..+++|++|++++|.++.....
T Consensus 109 L~~n~l~~l------------------~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--- 165 (332)
T 2ft3_A 109 ISKNHLVEI------------------PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFE--- 165 (332)
T ss_dssp CCSSCCCSC------------------CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSC---
T ss_pred CCCCcCCcc------------------Ccccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCC---
Confidence 777766533 44433 7888888888888887777788888888888888877532111
Q ss_pred hhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccC
Q 043388 200 FVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGE 279 (854)
Q Consensus 200 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 279 (854)
+..+..+ +|++|++++|+++ .+|.. +. ++|++|++++|+++++.+..|..
T Consensus 166 -~~~~~~l-~L~~L~l~~n~l~-~l~~~-------------------------~~--~~L~~L~l~~n~i~~~~~~~l~~ 215 (332)
T 2ft3_A 166 -PGAFDGL-KLNYLRISEAKLT-GIPKD-------------------------LP--ETLNELHLDHNKIQAIELEDLLR 215 (332)
T ss_dssp -TTSSCSC-CCSCCBCCSSBCS-SCCSS-------------------------SC--SSCSCCBCCSSCCCCCCTTSSTT
T ss_pred -cccccCC-ccCEEECcCCCCC-ccCcc-------------------------cc--CCCCEEECCCCcCCccCHHHhcC
Confidence 1233444 5555555555555 23322 11 34555555555555555555555
Q ss_pred cccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCccc
Q 043388 280 LQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLT 342 (854)
Q Consensus 280 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 342 (854)
+++|+.|++++|++++..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++
T Consensus 216 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~ 277 (332)
T 2ft3_A 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT 277 (332)
T ss_dssp CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCC
T ss_pred CCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCC
Confidence 555555555555555544445555555555555555555 44555555555555555555555
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6e-35 Score=315.81 Aligned_cols=246 Identities=15% Similarity=0.151 Sum_probs=182.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeeccc--------ccchHHHHHHHHHHHhcc---------CCCeee
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQ--------KGAFRSFVAECEALRNIR---------HRNLIK 609 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 609 (854)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|+.+++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 47899999999999999999998 57899999997542 223478899999999986 888888
Q ss_pred EEEEeeccC-------------------------CCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHH
Q 043388 610 IITICSSID-------------------------SKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAID 664 (854)
Q Consensus 610 ~~~~~~~~~-------------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ 664 (854)
+.+++.... .......|+||||+++|++.+.+... .+++.+++.|+.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-------~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-------LSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-------CCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-------CCCHHHHHHHHHH
Confidence 877653211 00134789999999999776666432 6789999999999
Q ss_pred HHHHHHHHH-hcCCCCeEeecCCCCceEecCCc--------------------ccc-cccccccccccCCCCCCcccccC
Q 043388 665 VASAIEYLH-HHCQPPIVHGDLKPSNVLLDHDM--------------------VAH-QNFSLSHQLDSASKTPSSSIGIK 722 (854)
Q Consensus 665 ia~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~~--------------------~~~-~Dfg~~~~~~~~~~~~~~~~~~~ 722 (854)
|+.||+||| +. +|+||||||+|||++.++ ..+ +|||+|+..... ..+
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--------~~~ 238 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--------IVV 238 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------EEE
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------cEE
Confidence 999999999 88 999999999999999874 444 499999877542 136
Q ss_pred CcccccCccccCCCCCCccchhHHHHHH-HHHHHhCCCCCCCcccCCchHhHHhhhcCCcccccccCchhhHHHhhccch
Q 043388 723 GTVGYVAPEYGMGSEASMTGDVYSFGIL-LLEMFTGRRPTDAAFTEGLTLHEFVKMTLPEKVIEIVDPSLLMEVMANNSM 801 (854)
Q Consensus 723 gt~~y~aPE~~~~~~~~~~sDv~slGvv-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 801 (854)
||+.|+|||++.+.. +.++||||+|++ .+++++|..||....................
T Consensus 239 gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------- 297 (336)
T 2vuw_A 239 FCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK-------------------- 297 (336)
T ss_dssp CCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS--------------------
T ss_pred EeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC--------------------
Confidence 999999999998766 899999998777 7788889999853100000000000000000
Q ss_pred hhHhhhhhHHHHHHHHHHHhhcccCCCCCCCCCHHHHH
Q 043388 802 IQEDRRARTQDCLNAITRTGVLCSMESPFERMEMRDVV 839 (854)
Q Consensus 802 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl 839 (854)
..........++.++.+++.+||+.| |++|++
T Consensus 298 -~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 298 -TKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp -SCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred -cccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 00011123345778999999999976 898887
No 294
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2e-33 Score=299.86 Aligned_cols=251 Identities=27% Similarity=0.428 Sum_probs=181.4
Q ss_pred CCCCeeecccccccc--cCCcCccCCCCCcEEeccc-ccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCc
Q 043388 40 SALGMLLIRWNSLGG--QIPTTLGLLRNLVYLNVAE-NQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLK 116 (854)
Q Consensus 40 ~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 116 (854)
.+++.|+|++|.+++ .+|..|+.+++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|. .|.++++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-FLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG-GGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCH-HHhCCCCCC
Confidence 467888888888887 7788888888888888884 888878888888888888888888887744442 233444444
Q ss_pred EEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCC
Q 043388 117 ELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTAN 196 (854)
Q Consensus 117 ~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~ 196 (854)
+|++++|.+. +.+|..|.++++|++|+|++|+|++..|..|
T Consensus 129 ~L~Ls~N~l~-----------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---------------------- 169 (313)
T 1ogq_A 129 TLDFSYNALS-----------------GTLPPSISSLPNLVGITFDGNRISGAIPDSY---------------------- 169 (313)
T ss_dssp EEECCSSEEE-----------------SCCCGGGGGCTTCCEEECCSSCCEEECCGGG----------------------
T ss_pred EEeCCCCccC-----------------CcCChHHhcCCCCCeEECcCCcccCcCCHHH----------------------
Confidence 4433333332 2234555555555555555555554444444
Q ss_pred ChhhhhhccCCC-CCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCC
Q 043388 197 DLDFVTLLTNCS-SLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPD 275 (854)
Q Consensus 197 ~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 275 (854)
..++ +|++|++++|++++.+|..+..+. |+.|++++|.+++..|..|..+++|+.|+|++|++++..|.
T Consensus 170 --------~~l~~~L~~L~L~~N~l~~~~~~~~~~l~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 239 (313)
T 1ogq_A 170 --------GSFSKLFTSMTISRNRLTGKIPPTFANLN--LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK 239 (313)
T ss_dssp --------GCCCTTCCEEECCSSEEEEECCGGGGGCC--CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG
T ss_pred --------hhhhhcCcEEECcCCeeeccCChHHhCCc--ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc
Confidence 3444 566666666666667777777763 78888888888877888888888888888888888866655
Q ss_pred CccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCc-cc
Q 043388 276 GVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNK-LT 342 (854)
Q Consensus 276 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~-l~ 342 (854)
+..+++|++|+|++|++++.+|..|..+++|+.|+|++|++++.+|.. ..+++|+.+++++|+ +.
T Consensus 240 -~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 240 -VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp -CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEE
T ss_pred -ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCcc
Confidence 778888888888888888888888888888888888888888888776 778888888888887 44
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.4e-32 Score=294.60 Aligned_cols=282 Identities=17% Similarity=0.191 Sum_probs=241.9
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccCh
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFP 81 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 81 (854)
|.++ .+|..+. ++|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..|+.+++|++|+|++|+++. +|
T Consensus 41 ~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~ 116 (330)
T 1xku_A 41 LGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LP 116 (330)
T ss_dssp SCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CC
T ss_pred CCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cC
Confidence 3444 4666554 589999999999998777799999999999999999998889999999999999999999994 55
Q ss_pred hhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEec
Q 043388 82 RWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDL 161 (854)
Q Consensus 82 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~L 161 (854)
..+. ++|++|++++|+++ .++...|.++++|++|+++.|.+... +..+..|.++++|++|++
T Consensus 117 ~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~---------------~~~~~~~~~l~~L~~L~l 178 (330)
T 1xku_A 117 EKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSS---------------GIENGAFQGMKKLSYIRI 178 (330)
T ss_dssp SSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGG---------------GBCTTGGGGCTTCCEEEC
T ss_pred hhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCcc---------------CcChhhccCCCCcCEEEC
Confidence 5443 79999999999998 88888899999999999988877542 245678999999999999
Q ss_pred CCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEcc
Q 043388 162 SGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIG 241 (854)
Q Consensus 162 s~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~ 241 (854)
++|+++.++...+ ++|++|++++|+++.+.. ..|..+++|++|+|++|.+++..+..+..++ .|+.|+++
T Consensus 179 ~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~ 248 (330)
T 1xku_A 179 ADTNITTIPQGLP---PSLTELHLDGNKITKVDA------ASLKGLNNLAKLGLSFNSISAVDNGSLANTP-HLRELHLN 248 (330)
T ss_dssp CSSCCCSCCSSCC---TTCSEEECTTSCCCEECT------GGGTTCTTCCEEECCSSCCCEECTTTGGGST-TCCEEECC
T ss_pred CCCccccCCcccc---ccCCEEECCCCcCCccCH------HHhcCCCCCCEEECCCCcCceeChhhccCCC-CCCEEECC
Confidence 9999997655443 899999999999986543 3688999999999999999977777888876 79999999
Q ss_pred CCcccccCCccccccccCCeeeccccccccCCCCCccCc------ccCceeeCccccccc--cCCccccCccccchhccc
Q 043388 242 GNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGEL------QHLQQLYMFRNFLQG--SIPPSLGNLTKLADLALS 313 (854)
Q Consensus 242 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~ 313 (854)
+|+++ .+|..+..+++|++|++++|+|+++.+..|... +.|+.|++++|.+.. ..|..|..+..|+.++|+
T Consensus 249 ~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~ 327 (330)
T 1xku_A 249 NNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLG 327 (330)
T ss_dssp SSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC-
T ss_pred CCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEec
Confidence 99999 788899999999999999999999888888644 789999999999863 567889999999999999
Q ss_pred cce
Q 043388 314 FNN 316 (854)
Q Consensus 314 ~N~ 316 (854)
+|+
T Consensus 328 ~N~ 330 (330)
T 1xku_A 328 NYK 330 (330)
T ss_dssp ---
T ss_pred ccC
Confidence 985
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7e-34 Score=303.39 Aligned_cols=259 Identities=28% Similarity=0.419 Sum_probs=222.8
Q ss_pred CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEccc-CcCcccCChhhhhhcccccEEEccCCcccccCCcccccc
Q 043388 178 KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCD-NQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNL 256 (854)
Q Consensus 178 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l 256 (854)
.+++.|+|++|.++.. ...+..+.++++|++|+|++ |.+.+.+|..+..+. .|++|++++|.+++.+|..|.++
T Consensus 50 ~~l~~L~L~~~~l~~~----~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~-~L~~L~Ls~n~l~~~~p~~~~~l 124 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKP----YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLT-QLHYLYITHTNVSGAIPDFLSQI 124 (313)
T ss_dssp CCEEEEEEECCCCSSC----EECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCT-TCSEEEEEEECCEEECCGGGGGC
T ss_pred ceEEEEECCCCCccCC----cccChhHhCCCCCCeeeCCCCCcccccCChhHhcCC-CCCEEECcCCeeCCcCCHHHhCC
Confidence 5788999999988631 01234678888999999985 888888888888886 79999999999988888889999
Q ss_pred ccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCcc-ccchhccccceecccCCCCCcCCCCCcccc
Q 043388 257 VNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLT-KLADLALSFNNLQGNIPSSLGNCQNLKGFD 335 (854)
Q Consensus 257 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 335 (854)
++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++.+|..+..++ |+.|+
T Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~ 203 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVD 203 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEE
T ss_pred CCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEE
Confidence 9999999999999888888888999999999999999888888888887 889999999999888888888887 89999
Q ss_pred cCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEE
Q 043388 336 ASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELN 415 (854)
Q Consensus 336 ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 415 (854)
+++|++++.+|. .++. +.+|+.|+|++|++++.+|. +..+++|++|+
T Consensus 204 Ls~N~l~~~~~~-------------------------~~~~-------l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~ 250 (313)
T 1ogq_A 204 LSRNMLEGDASV-------------------------LFGS-------DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLD 250 (313)
T ss_dssp CCSSEEEECCGG-------------------------GCCT-------TSCCSEEECCSSEECCBGGG-CCCCTTCCEEE
T ss_pred CcCCcccCcCCH-------------------------HHhc-------CCCCCEEECCCCceeeecCc-ccccCCCCEEE
Confidence 998888754443 2333 45699999999999977665 88899999999
Q ss_pred ccCcccccccchhhcCccCCCeeecccccCcccCCCCccccCcccccccccccccCCccc
Q 043388 416 VSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKGVFSNKTKISLQVNVKLCGGIDE 475 (854)
Q Consensus 416 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~~c~~~~~ 475 (854)
|++|++++.+|..|..+++|+.|+|++|+++|.+|..+.+.+...+.+.+|+++||.|..
T Consensus 251 Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp CCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred CcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 999999999999999999999999999999999999888999999999999999997543
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=9.6e-36 Score=337.43 Aligned_cols=364 Identities=17% Similarity=0.153 Sum_probs=180.9
Q ss_pred CCCCEEecccccccccCCcc-ccCcCCCCeeecccccccc----cCCcCccCCCCCcEEecccccCcccChhhhc-CCC-
Q 043388 16 LNLQTLAIDFNYLTGQLPDF-VGNLSALGMLLIRWNSLGG----QIPTTLGLLRNLVYLNVAENQFSGMFPRWIC-NIS- 88 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~- 88 (854)
++|++|||++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 35566666666665333222 5555566666666666553 2344455555566666666655543333222 233
Q ss_pred ---CCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCc
Q 043388 89 ---SLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQ 165 (854)
Q Consensus 89 ---~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~ 165 (854)
+|++|+|++|+|+ .. +...+|..|.++++|++|+|++|+
T Consensus 83 ~~~~L~~L~L~~n~i~-~~-------------------------------------~~~~l~~~l~~~~~L~~L~Ls~n~ 124 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLT-GA-------------------------------------GCGVLSSTLRTLPTLQELHLSDNL 124 (461)
T ss_dssp TTCCCCEEECTTSCCB-GG-------------------------------------GHHHHHHHTTSCTTCCEEECCSSB
T ss_pred CCCceeEEEccCCCCC-HH-------------------------------------HHHHHHHHHccCCceeEEECCCCc
Confidence 3555555555554 11 111234445555555555555555
Q ss_pred CcccCCcCcc-----ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhh----ccccc
Q 043388 166 FKGKVSIDFS-----SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANL----SSTMI 236 (854)
Q Consensus 166 i~~~~~~~f~-----~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l----~~~L~ 236 (854)
|+...+..+. ..++|++|+|++|+++..... .++..+..+++|++|++++|.++...+..+... .+.|+
T Consensus 125 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~ 202 (461)
T 1z7x_W 125 LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE--PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLE 202 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCC
T ss_pred CchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCce
Confidence 5433222221 133455555555554432111 123344445555555555555553333333221 12455
Q ss_pred EEEccCCccccc----CCccccccccCCeeeccccccccCC-----CCCccCcccCceeeCcccccccc----CCccccC
Q 043388 237 QFRIGGNQISGT----IPSGIRNLVNLIALTIEVNQLHGII-----PDGVGELQHLQQLYMFRNFLQGS----IPPSLGN 303 (854)
Q Consensus 237 ~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~ 303 (854)
.|++++|.++.. ++..+..+++|++|++++|++++.. +..+..+++|++|++++|.++.. ++..+..
T Consensus 203 ~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 282 (461)
T 1z7x_W 203 ALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA 282 (461)
T ss_dssp EEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH
T ss_pred EEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh
Confidence 566666655542 3445555566666666666655321 22223455666666666666543 4445555
Q ss_pred ccccchhccccceecccCCCCCcC-----CCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccc
Q 043388 304 LTKLADLALSFNNLQGNIPSSLGN-----CQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLK 378 (854)
Q Consensus 304 l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~ 378 (854)
+++|+.|++++|.+.+..+..+.. .++|+.|++++|.+++.....+ +..+..
T Consensus 283 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l---------------------~~~l~~-- 339 (461)
T 1z7x_W 283 KESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHF---------------------SSVLAQ-- 339 (461)
T ss_dssp CTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH---------------------HHHHHH--
T ss_pred CCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHH---------------------HHHHhh--
Confidence 666666666666665433322222 2466666666666653211111 000111
Q ss_pred cccccccccceeeccCcccccCCCccccc-----CCCCCEEEccCccccc----ccchhhcCccCCCeeecccccCcc
Q 043388 379 NLVITCVSLEYLDISSNSFHGVIPFSLGF-----MKSIKELNVSSNNLSG----QIPEFLQNLSFLEFLNLSYNHLEG 447 (854)
Q Consensus 379 ~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~ 447 (854)
+++|++|+|++|.+++..+..+.. .++|++|+|++|++++ .+|..+..+++|++|++++|++++
T Consensus 340 -----~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 340 -----NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp -----CSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred -----CCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 344666666666665544433332 4566666666666664 556666666666666666666654
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=1.3e-35 Score=336.29 Aligned_cols=384 Identities=20% Similarity=0.164 Sum_probs=248.9
Q ss_pred CcccccCchh-hhcCCCCCEEecccccccc----cCCccccCcCCCCeeecccccccccCCcCc-cCCC----CCcEEec
Q 043388 2 NKLEGQIPEE-IGSLLNLQTLAIDFNYLTG----QLPDFVGNLSALGMLLIRWNSLGGQIPTTL-GLLR----NLVYLNV 71 (854)
Q Consensus 2 n~~~~~~p~~-~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~----~L~~L~L 71 (854)
|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++ +|++|+|
T Consensus 13 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L 92 (461)
T 1z7x_W 13 EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSL 92 (461)
T ss_dssp CCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEEC
T ss_pred cccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEc
Confidence 5565544443 8899999999999999984 457778888999999999999986544433 3355 7999999
Q ss_pred ccccCcc----cChhhhcCCCCCceeeecccccccccCc----ccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCC
Q 043388 72 AENQFSG----MFPRWICNISSLEFIYLTVNRFSGSLPF----DILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTA 143 (854)
Q Consensus 72 s~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~ 143 (854)
++|+|++ .+|.+|..+++|++|+|++|++++..+. ..+...++|++|++++|+++. ...
T Consensus 93 ~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~-------------~~~ 159 (461)
T 1z7x_W 93 QNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA-------------ASC 159 (461)
T ss_dssp TTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG-------------GGH
T ss_pred cCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCH-------------HHH
Confidence 9999994 5689999999999999999998732222 222334556666665554432 222
Q ss_pred CCCCccccCCCCCCEEecCCCcCcccCCcCccc-----cCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccC
Q 043388 144 SSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS-----LKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDN 218 (854)
Q Consensus 144 ~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~-----l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 218 (854)
..++..+..+++|++|+|++|+++...+..+.. .++|++|+|++|.++..... .++..+..+++|++|++++|
T Consensus 160 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~Ls~n 237 (461)
T 1z7x_W 160 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--DLCGIVASKASLRELALGSN 237 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--HHHHHHHHCTTCCEEECCSS
T ss_pred HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--HHHHHHHhCCCccEEeccCC
Confidence 345667777888999999998887655444432 55788888888877542211 23445666777777777777
Q ss_pred cCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccC----CCCCccCcccCceeeCcccccc
Q 043388 219 QFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGI----IPDGVGELQHLQQLYMFRNFLQ 294 (854)
Q Consensus 219 ~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 294 (854)
.+++.....+. +..+..+++|++|++++|+++.. ++..+..+++|++|++++|.+.
T Consensus 238 ~l~~~~~~~l~--------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 297 (461)
T 1z7x_W 238 KLGDVGMAELC--------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELG 297 (461)
T ss_dssp BCHHHHHHHHH--------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCH
T ss_pred cCChHHHHHHH--------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCc
Confidence 76632221111 11122345556666666655542 3344555666666666666665
Q ss_pred ccCCccccCc-----cccchhccccceeccc----CCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCC
Q 043388 295 GSIPPSLGNL-----TKLADLALSFNNLQGN----IPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNL 365 (854)
Q Consensus 295 ~~~~~~~~~l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~ 365 (854)
+..+..+... ++|+.|++++|.+++. ++..+..+++|+.|++++|.+++..+..+... +..
T Consensus 298 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~--------l~~-- 367 (461)
T 1z7x_W 298 DEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQG--------LGQ-- 367 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHH--------HTS--
T ss_pred hHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHH--------HcC--
Confidence 4433333322 4677777777776644 34556667888888888887764322222110 000
Q ss_pred CCCCcCccccccccccccccccceeeccCccccc----CCCcccccCCCCCEEEccCcccccccchhhc-----CccCCC
Q 043388 366 LNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHG----VIPFSLGFMKSIKELNVSSNNLSGQIPEFLQ-----NLSFLE 436 (854)
Q Consensus 366 l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~ 436 (854)
..++|++|+|++|.+++ .+|..+..+++|++|+|++|++++.-...+. ....|+
T Consensus 368 -----------------~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~ 430 (461)
T 1z7x_W 368 -----------------PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 430 (461)
T ss_dssp -----------------TTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCC
T ss_pred -----------------CCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchh
Confidence 02468888888888885 6777788888899999999988754322222 133577
Q ss_pred eeecccccCcc
Q 043388 437 FLNLSYNHLEG 447 (854)
Q Consensus 437 ~L~ls~N~l~~ 447 (854)
.|++.+|.+..
T Consensus 431 ~L~~~~~~~~~ 441 (461)
T 1z7x_W 431 QLVLYDIYWSE 441 (461)
T ss_dssp EEECTTCCCCH
T ss_pred heeecccccCH
Confidence 77777776654
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=4.7e-31 Score=287.26 Aligned_cols=278 Identities=19% Similarity=0.128 Sum_probs=218.7
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.++.....++++|.++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|+++++.|.+|.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 4455667888888888 6777665 488999999999987777788889999999999999988888888889999999
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCc--cccCCCCCCEEecCCC-cCcccC
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPD--SLSNASNLERLDLSGN-QFKGKV 170 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~--~~~~l~~L~~L~Ls~N-~i~~~~ 170 (854)
+|++|+|+ .+|...|.++++|++|++++|+++.+ |. .|.++++|++|++++| .++.+.
T Consensus 106 ~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l------------------~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 106 DLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTL------------------GETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp ECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSS------------------CSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred ECCCCcCC-cCCHhHhCCCccCCEEECCCCCCccc------------------CchhhhccCCCCcEEECCCCccccccC
Confidence 99999988 78888788888888888887776543 33 6788889999999988 577777
Q ss_pred CcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCC
Q 043388 171 SIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIP 250 (854)
Q Consensus 171 ~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~ 250 (854)
+..|.++++|++|++++|.++.... ..+..+++|++|++++|.++ .+|..+....+.|+.|++++|.+++..+
T Consensus 167 ~~~~~~l~~L~~L~l~~n~l~~~~~------~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 239 (353)
T 2z80_A 167 RKDFAGLTFLEELEIDASDLQSYEP------KSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHF 239 (353)
T ss_dssp TTTTTTCCEEEEEEEEETTCCEECT------TTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCC
T ss_pred HHHccCCCCCCEEECCCCCcCccCH------HHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccc
Confidence 8888888999999999998876533 35778888999999999886 5666655544578899999999887665
Q ss_pred cccc---ccccCCeeecccccccc----CCCCCccCcccCceeeCccccccccCCccccCccccchhccccceeccc
Q 043388 251 SGIR---NLVNLIALTIEVNQLHG----IIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGN 320 (854)
Q Consensus 251 ~~~~---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 320 (854)
..+. ....++.++|++|.+++ .+|..+..+++|++|++++|+++...+..|..+++|+.|+|++|++.+.
T Consensus 240 ~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 240 SELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp C------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 5443 35667778888877765 3566788899999999999999844444468899999999999988753
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=6.3e-31 Score=286.23 Aligned_cols=282 Identities=17% Similarity=0.156 Sum_probs=233.5
Q ss_pred cCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCc
Q 043388 37 GNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLK 116 (854)
Q Consensus 37 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 116 (854)
...+.....++++|+++ .+|..+. ++|++|+|++|+|+++.+.+|.++++|++|+|++|+|+ .++...|.++++|+
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLE 103 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC-EECTTTTTTCTTCC
T ss_pred CCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccC-ccCHhhcCCCCCCC
Confidence 34455667899999999 6777665 58999999999999888889999999999999999998 77777888888888
Q ss_pred EEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCC-cCccccCCCCeEecccc-cccCCC
Q 043388 117 ELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVS-IDFSSLKNLWWLNLEQN-NLGMGT 194 (854)
Q Consensus 117 ~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~-~~f~~l~~L~~L~L~~N-~l~~~~ 194 (854)
+|++++|+++.+ .+..|.++++|++|+|++|+++.+++ ..|..+++|++|++++| .++.+.
T Consensus 104 ~L~Ls~n~l~~~-----------------~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~ 166 (353)
T 2z80_A 104 HLDLSYNYLSNL-----------------SSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQ 166 (353)
T ss_dssp EEECCSSCCSSC-----------------CHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred EEECCCCcCCcC-----------------CHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccC
Confidence 888888877543 13348899999999999999998777 68999999999999999 466554
Q ss_pred CCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCC
Q 043388 195 ANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIP 274 (854)
Q Consensus 195 ~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 274 (854)
.. .|.++++|++|++++|++++..|..+..+. +|+.|++++|.++...+..+..+++|+.|++++|++++..+
T Consensus 167 ~~------~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 239 (353)
T 2z80_A 167 RK------DFAGLTFLEELEIDASDLQSYEPKSLKSIQ-NVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHF 239 (353)
T ss_dssp TT------TTTTCCEEEEEEEEETTCCEECTTTTTTCS-EEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCC
T ss_pred HH------HccCCCCCCEEECCCCCcCccCHHHHhccc-cCCeecCCCCccccchhhhhhhcccccEEECCCCccccccc
Confidence 33 578899999999999999988899999886 79999999999985555556678999999999999998766
Q ss_pred CCcc---CcccCceeeCccccccc----cCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccc
Q 043388 275 DGVG---ELQHLQQLYMFRNFLQG----SIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIP 346 (854)
Q Consensus 275 ~~~~---~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p 346 (854)
..+. ....++.++|++|.+.+ .+|..+..+++|+.|++++|+++...+..|..+++|+.|++++|++.+..|
T Consensus 240 ~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 240 SELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp C------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5543 45677888888888775 467788999999999999999995444446899999999999999987554
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=285.13 Aligned_cols=247 Identities=21% Similarity=0.277 Sum_probs=146.9
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
.+.++++++.++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|+|+++.+.+|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 445555555555 4454443 4555555555555555555555555555555555555555555555555555555555
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+|+ .+|...|.++++|+ +|+|++|+|+.+.+..|..+
T Consensus 122 n~l~-~~~~~~~~~l~~L~-----------------------------------------~L~L~~N~i~~~~~~~~~~l 159 (440)
T 3zyj_A 122 NRLT-TIPNGAFVYLSKLK-----------------------------------------ELWLRNNPIESIPSYAFNRI 159 (440)
T ss_dssp SCCS-SCCTTTSCSCSSCC-----------------------------------------EEECCSCCCCEECTTTTTTC
T ss_pred CcCC-eeCHhHhhccccCc-----------------------------------------eeeCCCCcccccCHHHhhhC
Confidence 5555 45544444444444 44444444444444444444
Q ss_pred CCCCeEeccc-ccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccccc
Q 043388 178 KNLWWLNLEQ-NNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNL 256 (854)
Q Consensus 178 ~~L~~L~L~~-N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l 256 (854)
++|++|+|++ |.++.++.. .|.++++|++|+|++|+++ .+|. +..+. +|+.|+|++|.|++..|..|.++
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~------~~~~l~~L~~L~L~~n~l~-~~~~-~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l 230 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEG------AFEGLSNLRYLNLAMCNLR-EIPN-LTPLI-KLDELDLSGNHLSAIRPGSFQGL 230 (440)
T ss_dssp TTCCEEECCCCTTCCEECTT------TTTTCSSCCEEECTTSCCS-SCCC-CTTCS-SCCEEECTTSCCCEECTTTTTTC
T ss_pred cccCEeCCCCCCCcceeCcc------hhhcccccCeecCCCCcCc-cccc-cCCCc-ccCEEECCCCccCccChhhhccC
Confidence 4444444444 223222221 3444455555555555554 3332 33333 56666666666666667777778
Q ss_pred ccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceec
Q 043388 257 VNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQ 318 (854)
Q Consensus 257 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 318 (854)
++|+.|+|++|+|+++.+.+|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 231 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 231 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 88888888888888777788888888888888888888777777788888888888888876
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1e-29 Score=286.26 Aligned_cols=248 Identities=21% Similarity=0.224 Sum_probs=152.4
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
....++++++.++ .+|..+. +++++|+|++|+|++..|..|..+++|++|+|++|+|+++.|.+|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3456666666666 4555444 466666666666666666666666666666666666666666666666666666666
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCC-CcCcccCCcCcc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSG-NQFKGKVSIDFS 175 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~-N~i~~~~~~~f~ 175 (854)
+|+|+ .+|...|.++++|++|++++|+++.+ .+..|.++++|++|+|++ |.+..+.+..|.
T Consensus 132 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~ 193 (452)
T 3zyi_A 132 DNWLT-VIPSGAFEYLSKLRELWLRNNPIESI-----------------PSYAFNRVPSLMRLDLGELKKLEYISEGAFE 193 (452)
T ss_dssp SSCCS-BCCTTTSSSCTTCCEEECCSCCCCEE-----------------CTTTTTTCTTCCEEECCCCTTCCEECTTTTT
T ss_pred CCcCC-ccChhhhcccCCCCEEECCCCCccee-----------------CHhHHhcCCcccEEeCCCCCCccccChhhcc
Confidence 66666 55555555555555555555544322 123455555556666555 444444444555
Q ss_pred ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccc
Q 043388 176 SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRN 255 (854)
Q Consensus 176 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~ 255 (854)
++++|++|+|++|+++.++ .+..++ .|+.|+|++|.|++..|..|.+
T Consensus 194 ~l~~L~~L~L~~n~l~~~~--------~~~~l~-------------------------~L~~L~Ls~N~l~~~~~~~~~~ 240 (452)
T 3zyi_A 194 GLFNLKYLNLGMCNIKDMP--------NLTPLV-------------------------GLEELEMSGNHFPEIRPGSFHG 240 (452)
T ss_dssp TCTTCCEEECTTSCCSSCC--------CCTTCT-------------------------TCCEEECTTSCCSEECGGGGTT
T ss_pred CCCCCCEEECCCCcccccc--------cccccc-------------------------cccEEECcCCcCcccCcccccC
Confidence 5555555555555554332 123333 4555555555555566666777
Q ss_pred cccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceec
Q 043388 256 LVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQ 318 (854)
Q Consensus 256 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 318 (854)
+++|+.|+|++|+++++.+.+|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 241 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 777777777777777777777777777777777777777666666777777777777777765
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=7.2e-30 Score=272.13 Aligned_cols=283 Identities=18% Similarity=0.169 Sum_probs=193.8
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCccc--ChhhhcCCCCCceeee
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGM--FPRWICNISSLEFIYL 95 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L 95 (854)
-+.++++++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++.. .|..+..+++|++|+|
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 467899999998 6777654 6899999999999966566789999999999999999843 3677888999999999
Q ss_pred cccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcc
Q 043388 96 TVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFS 175 (854)
Q Consensus 96 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~ 175 (854)
++|+++ .+|.. |..+++|++|++++|+++.+. .+..|.++++|++|+|++|++++..+..|.
T Consensus 86 s~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~----------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 147 (306)
T 2z66_A 86 SFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMS----------------EFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147 (306)
T ss_dssp CSCSEE-EEEEE-EETCTTCCEEECTTSEEESST----------------TTTTTTTCTTCCEEECTTSCCEECSTTTTT
T ss_pred CCCccc-cChhh-cCCCCCCCEEECCCCcccccc----------------cchhhhhccCCCEEECCCCcCCccchhhcc
Confidence 999988 67654 667777777777776664331 114677888888888888888888888888
Q ss_pred ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccc
Q 043388 176 SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRN 255 (854)
Q Consensus 176 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~ 255 (854)
.+++|++|+|++|.++.. ..+..+..+++|++|+|++|++++..|..+..++ .|+.|++++|.+++..+..|..
T Consensus 148 ~l~~L~~L~l~~n~l~~~-----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQEN-----FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS-SLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp TCTTCCEEECTTCEEGGG-----EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTSCCSBCCSGGGTT
T ss_pred cCcCCCEEECCCCccccc-----cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC-CCCEEECCCCccCccChhhccC
Confidence 888888888888877531 1123466677777777777777755566665554 5666666666666555556666
Q ss_pred cccCCeeeccccccccCCCCCccCcc-cCceeeCccccccccCCc--cccCccccchhccccceecccCCCCCcC
Q 043388 256 LVNLIALTIEVNQLHGIIPDGVGELQ-HLQQLYMFRNFLQGSIPP--SLGNLTKLADLALSFNNLQGNIPSSLGN 327 (854)
Q Consensus 256 l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 327 (854)
+++|+.|+|++|++++..|..+..++ +|++|+|++|.+++..+. ....+...+.+....+.+....|..+.+
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCC
Confidence 66666666666666666666666653 666666666666543221 1122333444444444444444444433
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.5e-30 Score=274.58 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=153.7
Q ss_pred CeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccC--cccccCCCCCcEEEc
Q 043388 43 GMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLP--FDILVNLPNLKELYL 120 (854)
Q Consensus 43 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~~l~~L~~L~l 120 (854)
+.++++++.++ .+|..+. ++|++|+|++|+++++.+..|.++++|++|+|++|+++ .+. ...+..+++|++|++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS-FKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-EEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccC-cccCcccccccccccCEEEC
Confidence 46777777777 5565543 57777777777777655566777777777777777775 321 112233444444444
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCC-cCccccCCCCeEecccccccCCCCCChh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVS-IDFSSLKNLWWLNLEQNNLGMGTANDLD 199 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~ 199 (854)
++|.+. .+|..+.++++|++|+|++|+++++.+ ..|..+++
T Consensus 86 s~n~i~------------------~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~-------------------- 127 (306)
T 2z66_A 86 SFNGVI------------------TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN-------------------- 127 (306)
T ss_dssp CSCSEE------------------EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTT--------------------
T ss_pred CCCccc------------------cChhhcCCCCCCCEEECCCCcccccccchhhhhccC--------------------
Confidence 444332 234445555666666666665555443 34444444
Q ss_pred hhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccc-cCCccccccccCCeeeccccccccCCCCCcc
Q 043388 200 FVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISG-TIPSGIRNLVNLIALTIEVNQLHGIIPDGVG 278 (854)
Q Consensus 200 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 278 (854)
|++|++++|.+++..|..+..+. .|+.|++++|.+++ ..|..|..+++|++|+|++|+++++.|..|.
T Consensus 128 ----------L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 196 (306)
T 2z66_A 128 ----------LIYLDISHTHTRVAFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN 196 (306)
T ss_dssp ----------CCEEECTTSCCEECSTTTTTTCT-TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred ----------CCEEECCCCcCCccchhhcccCc-CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhc
Confidence 45555555554444444444443 45555555555554 4566666777777777777777766667777
Q ss_pred CcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCC-CCcccccCCCcccCc
Q 043388 279 ELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQ-NLKGFDASHNKLTGA 344 (854)
Q Consensus 279 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~~~ 344 (854)
.+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|..+..++ +|+.|++++|++++.
T Consensus 197 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 197 SLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp TCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 777777777777777766665677777777777777777766777777763 677777777777643
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=2.6e-29 Score=264.75 Aligned_cols=268 Identities=20% Similarity=0.209 Sum_probs=176.0
Q ss_pred CEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeeccc
Q 043388 19 QTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVN 98 (854)
Q Consensus 19 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 98 (854)
++++++++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.++++.|.+|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67888888887 566554 357888888888888777778888888888888888888777888888888888888888
Q ss_pred c-cccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 99 R-FSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 99 ~-l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
+ ++ .++...|..+++|++|++++|++..+ .|..|.++++|++|+|++|+++++.+..|..+
T Consensus 91 ~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 91 AQLR-SVDPATFHGLGRLHTLHLDRCGLQEL-----------------GPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp TTCC-CCCTTTTTTCTTCCEEECTTSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCcc-ccCHHHhcCCcCCCEEECCCCcCCEE-----------------CHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 6 65 66555566666666666555554422 24455666666666666666665555555555
Q ss_pred CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccc
Q 043388 178 KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLV 257 (854)
Q Consensus 178 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~ 257 (854)
++|++|+|++|+++.++ +..+..+. .|+.|++++|.+++..|..|.+++
T Consensus 153 ~~L~~L~l~~n~l~~~~------------------------------~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~ 201 (285)
T 1ozn_A 153 GNLTHLFLHGNRISSVP------------------------------ERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLG 201 (285)
T ss_dssp TTCCEEECCSSCCCEEC------------------------------TTTTTTCT-TCCEEECCSSCCCEECTTTTTTCT
T ss_pred CCccEEECCCCcccccC------------------------------HHHhcCcc-ccCEEECCCCcccccCHhHccCcc
Confidence 55555555555554333 22333332 455555555555555666677777
Q ss_pred cCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcC--CCCCcccc
Q 043388 258 NLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGN--CQNLKGFD 335 (854)
Q Consensus 258 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--l~~L~~L~ 335 (854)
+|+.|++++|+++++.+..|..+++|+.|++++|.+....+.. .-...++.+..+.+.+....|..+.+ +..++..+
T Consensus 202 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~g~~l~~l~~~~ 280 (285)
T 1ozn_A 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAAND 280 (285)
T ss_dssp TCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGTTCBGGGSCGGG
T ss_pred cccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhCCcChhhcCHHH
Confidence 7777777777777766666777777777777777776433321 22244666667777777677766654 44555555
Q ss_pred cCCC
Q 043388 336 ASHN 339 (854)
Q Consensus 336 ls~N 339 (854)
+.+|
T Consensus 281 l~~C 284 (285)
T 1ozn_A 281 LQGC 284 (285)
T ss_dssp SCCC
T ss_pred hccC
Confidence 5544
No 306
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=5.8e-29 Score=279.16 Aligned_cols=248 Identities=22% Similarity=0.281 Sum_probs=204.6
Q ss_pred CCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcc
Q 043388 42 LGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLT 121 (854)
Q Consensus 42 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~ 121 (854)
...++.+++.++ .+|..+. +++++|+|++|+|+++.+.+|.++++|++|+|++|+|+ .++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~---------------- 104 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIR-TIE---------------- 104 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCC-EEC----------------
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCC-ccC----------------
Confidence 456666666666 4555443 55666666666666666666666666666666666654 222
Q ss_pred cCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhh
Q 043388 122 FCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFV 201 (854)
Q Consensus 122 ~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~ 201 (854)
+..|.++++|++|+|++|+|+.+++..|..+++|++|+|++|.|+.++..
T Consensus 105 -------------------------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~----- 154 (440)
T 3zyj_A 105 -------------------------IGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSY----- 154 (440)
T ss_dssp -------------------------GGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTT-----
T ss_pred -------------------------hhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHH-----
Confidence 45677888999999999999999888999999999999999999877654
Q ss_pred hhccCCCCCcEEEcccCcCcccCCh-hhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCc
Q 043388 202 TLLTNCSSLKALSLCDNQFGGELPH-SIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGEL 280 (854)
Q Consensus 202 ~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 280 (854)
.|..+++|++|+|++|+..+.++. .|..+. +|+.|++++|+++ .+| .+..+++|++|+|++|+|+++.|..|.++
T Consensus 155 -~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~-~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 230 (440)
T 3zyj_A 155 -AFNRIPSLRRLDLGELKRLSYISEGAFEGLS-NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGL 230 (440)
T ss_dssp -TTTTCTTCCEEECCCCTTCCEECTTTTTTCS-SCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTC
T ss_pred -HhhhCcccCEeCCCCCCCcceeCcchhhccc-ccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccC
Confidence 578999999999999544445554 566665 8999999999999 445 58999999999999999999999999999
Q ss_pred ccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccC
Q 043388 281 QHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTG 343 (854)
Q Consensus 281 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 343 (854)
++|+.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.-
T Consensus 231 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 231 MHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred ccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 999999999999999999999999999999999999998888889999999999999999873
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=5.4e-29 Score=262.31 Aligned_cols=256 Identities=20% Similarity=0.240 Sum_probs=184.3
Q ss_pred CeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEccc
Q 043388 43 GMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTF 122 (854)
Q Consensus 43 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~ 122 (854)
++++++++.++ .+|..+ .++|++|+|++|.|+++.+.+|.++++|++|+|++|+++ .++...|.++++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccc-eeCHhhcCCccCCCEEeCCC
Confidence 67888888887 556554 468888888888888777778888888888888888887 55545556666666555555
Q ss_pred CC-CCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhh
Q 043388 123 CS-LKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFV 201 (854)
Q Consensus 123 n~-l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~ 201 (854)
|. +..+ .|..|.++++|++|+|++|+++++.+..|..+++|++|+|++|+
T Consensus 90 n~~l~~~-----------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~------------ 140 (285)
T 1ozn_A 90 NAQLRSV-----------------DPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA------------ 140 (285)
T ss_dssp CTTCCCC-----------------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC------------
T ss_pred CCCcccc-----------------CHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCc------------
Confidence 54 3322 24455566666666666666665555555555555555555554
Q ss_pred hhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcc
Q 043388 202 TLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQ 281 (854)
Q Consensus 202 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 281 (854)
+++..+..+..++ +|+.|++++|++++..+..|.++++|+.|+|++|++++..|..|..++
T Consensus 141 ------------------l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 201 (285)
T 1ozn_A 141 ------------------LQALPDDTFRDLG-NLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201 (285)
T ss_dssp ------------------CCCCCTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred ------------------ccccCHhHhccCC-CccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcc
Confidence 4433333344443 567777777777767777899999999999999999999999999999
Q ss_pred cCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcc
Q 043388 282 HLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLS 351 (854)
Q Consensus 282 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 351 (854)
+|+.|++++|++++..+..+..+++|+.|++++|.+....+. ..-+..++.+..+.+.+....|..+..
T Consensus 202 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 202 RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp TCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred cccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHhCC
Confidence 999999999999987777899999999999999999843221 122244666778888888788876543
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=7.7e-29 Score=279.19 Aligned_cols=249 Identities=21% Similarity=0.256 Sum_probs=204.4
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
....++.+++.++ .+|..+. ++|++|+|++|+|+++.|+.|.++++|++|+|++|+|+ .++...|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR-QIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC-CcChhhccCcccCCEEEC
Confidence 4678899999998 6777664 78999999999999888999999999999999999998 677777788887777777
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEeccc-ccccCCCCCChh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQ-NNLGMGTANDLD 199 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~-N~l~~~~~~~~~ 199 (854)
++|+++.+ .+..|.++++|++|+|++|+|+.+++..|..+++|++|+|++ |.++.++..
T Consensus 131 ~~n~l~~~-----------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~--- 190 (452)
T 3zyi_A 131 FDNWLTVI-----------------PSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEG--- 190 (452)
T ss_dssp CSSCCSBC-----------------CTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTT---
T ss_pred CCCcCCcc-----------------ChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChh---
Confidence 77766533 244577788888888888888877777788888888888877 444443332
Q ss_pred hhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccC
Q 043388 200 FVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGE 279 (854)
Q Consensus 200 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 279 (854)
.|.++++|++|+|++|+++ +. | .+..+++|+.|+|++|+|+++.|..|.+
T Consensus 191 ---~~~~l~~L~~L~L~~n~l~-------------------------~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 240 (452)
T 3zyi_A 191 ---AFEGLFNLKYLNLGMCNIK-------------------------DM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHG 240 (452)
T ss_dssp ---TTTTCTTCCEEECTTSCCS-------------------------SC-C-CCTTCTTCCEEECTTSCCSEECGGGGTT
T ss_pred ---hccCCCCCCEEECCCCccc-------------------------cc-c-cccccccccEEECcCCcCcccCcccccC
Confidence 3555566666666666554 22 2 3678899999999999999999999999
Q ss_pred cccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccC
Q 043388 280 LQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTG 343 (854)
Q Consensus 280 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 343 (854)
+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.+..
T Consensus 241 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 241 LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred ccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 9999999999999999999999999999999999999998888889999999999999999873
No 309
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=2.4e-28 Score=281.65 Aligned_cols=268 Identities=26% Similarity=0.276 Sum_probs=222.1
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeee
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYL 95 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 95 (854)
.++++|++++|.|+ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 46999999999999 7888776 89999999999999 5666 57999999999999995 554 7899999999
Q ss_pred cccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcc
Q 043388 96 TVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFS 175 (854)
Q Consensus 96 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~ 175 (854)
++|+|+ .+|. .+++|+.|++++|+++. +|.. +++|++|+|++|+|++++.
T Consensus 109 s~N~l~-~l~~----~l~~L~~L~L~~N~l~~------------------lp~~---l~~L~~L~Ls~N~l~~l~~---- 158 (622)
T 3g06_A 109 FSNPLT-HLPA----LPSGLCKLWIFGNQLTS------------------LPVL---PPGLQELSVSDNQLASLPA---- 158 (622)
T ss_dssp CSCCCC-CCCC----CCTTCCEEECCSSCCSC------------------CCCC---CTTCCEEECCSSCCSCCCC----
T ss_pred cCCcCC-CCCC----CCCCcCEEECCCCCCCc------------------CCCC---CCCCCEEECcCCcCCCcCC----
Confidence 999998 6775 45667777766666543 4543 4899999999999997643
Q ss_pred ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccc
Q 043388 176 SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRN 255 (854)
Q Consensus 176 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~ 255 (854)
.+++|+.|++++|.|+.++ ..+++|+.|+|++|.++ .+|..+ +.|+.|++++|.++ .+|..
T Consensus 159 ~~~~L~~L~L~~N~l~~l~----------~~~~~L~~L~Ls~N~l~-~l~~~~----~~L~~L~L~~N~l~-~l~~~--- 219 (622)
T 3g06_A 159 LPSELCKLWAYNNQLTSLP----------MLPSGLQELSVSDNQLA-SLPTLP----SELYKLWAYNNRLT-SLPAL--- 219 (622)
T ss_dssp CCTTCCEEECCSSCCSCCC----------CCCTTCCEEECCSSCCS-CCCCCC----TTCCEEECCSSCCS-SCCCC---
T ss_pred ccCCCCEEECCCCCCCCCc----------ccCCCCcEEECCCCCCC-CCCCcc----chhhEEECcCCccc-ccCCC---
Confidence 3578999999999998765 24688999999999998 455432 47899999999999 45543
Q ss_pred cccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccc
Q 043388 256 LVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFD 335 (854)
Q Consensus 256 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 335 (854)
+++|+.|+|++|+|+++ | ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|+
T Consensus 220 ~~~L~~L~Ls~N~L~~l-p---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 220 PSGLKELIVSGNRLTSL-P---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp CTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCCEEEccCCccCcC-C---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 47899999999999974 4 46689999999999999 5665 5689999999999999 7799999999999999
Q ss_pred cCCCcccCccchhhcch
Q 043388 336 ASHNKLTGAIPQQVLSI 352 (854)
Q Consensus 336 ls~N~l~~~~p~~~~~~ 352 (854)
+++|++++..|..+..+
T Consensus 291 L~~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 291 LEGNPLSERTLQALREI 307 (622)
T ss_dssp CCSCCCCHHHHHHHHHH
T ss_pred ecCCCCCCcCHHHHHhc
Confidence 99999998777655443
No 310
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.6e-28 Score=261.76 Aligned_cols=236 Identities=18% Similarity=0.173 Sum_probs=166.9
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
...++++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..|+.+++|++|+|++|+++ .+|..|.++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3478999999999999 78888999999999999999999 88999999999999999999999 678899999999999
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcC
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSID 173 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~ 173 (854)
+|++|++.+.+|..+.. . .++..|.++++|++|+|++|+|+ ..|..
T Consensus 156 ~L~~n~~~~~~p~~~~~-------~--------------------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 156 SIRACPELTELPEPLAS-------T--------------------------DASGEHQGLVNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp EEEEETTCCCCCSCSEE-------E--------------------------C-CCCEEESTTCCEEEEEEECCC-CCCGG
T ss_pred ECCCCCCccccChhHhh-------c--------------------------cchhhhccCCCCCEEECcCCCcC-cchHh
Confidence 99998887788765421 0 01223344455555555555554 23334
Q ss_pred ccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccc
Q 043388 174 FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGI 253 (854)
Q Consensus 174 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~ 253 (854)
|..+++|++|+|++|+++.++. .+..+++|++|+|++|.+.+.+|..+..++ .|+.|++++|.+.+.+|..+
T Consensus 202 l~~l~~L~~L~L~~N~l~~l~~-------~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~-~L~~L~L~~n~~~~~~p~~~ 273 (328)
T 4fcg_A 202 IANLQNLKSLKIRNSPLSALGP-------AIHHLPKLEELDLRGCTALRNYPPIFGGRA-PLKRLILKDCSNLLTLPLDI 273 (328)
T ss_dssp GGGCTTCCEEEEESSCCCCCCG-------GGGGCTTCCEEECTTCTTCCBCCCCTTCCC-CCCEEECTTCTTCCBCCTTG
T ss_pred hcCCCCCCEEEccCCCCCcCch-------hhccCCCCCEEECcCCcchhhhHHHhcCCC-CCCEEECCCCCchhhcchhh
Confidence 5555555555555555543221 244555666666666666666666666654 56666666666666777777
Q ss_pred cccccCCeeeccccccccCCCCCccCcccCceeeCcccccc
Q 043388 254 RNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQ 294 (854)
Q Consensus 254 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 294 (854)
.++++|++|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 274 ~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 274 HRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp GGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 77777777777777777777777777777777777766554
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1e-29 Score=271.84 Aligned_cols=270 Identities=15% Similarity=0.157 Sum_probs=200.6
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeee
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYL 95 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 95 (854)
..++.++++.+.+...++..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..| |..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 346667777777775555666677788888888888887767788888888888888888876554 788888888888
Q ss_pred cccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcc
Q 043388 96 TVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFS 175 (854)
Q Consensus 96 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~ 175 (854)
++|+|+ .++ ..++|++|++++|+++.+ +. ..+++|++|+|++|+|+++.+..|.
T Consensus 88 s~n~l~-~l~-----~~~~L~~L~l~~n~l~~~------------------~~--~~~~~L~~L~l~~N~l~~~~~~~~~ 141 (317)
T 3o53_A 88 NNNYVQ-ELL-----VGPSIETLHAANNNISRV------------------SC--SRGQGKKNIYLANNKITMLRDLDEG 141 (317)
T ss_dssp CSSEEE-EEE-----ECTTCCEEECCSSCCSEE------------------EE--CCCSSCEEEECCSSCCCSGGGBCTG
T ss_pred cCCccc-ccc-----CCCCcCEEECCCCccCCc------------------Cc--cccCCCCEEECCCCCCCCccchhhh
Confidence 888887 444 225666666665555432 21 2367788899999998888888888
Q ss_pred ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccc
Q 043388 176 SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRN 255 (854)
Q Consensus 176 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~ 255 (854)
.+++|++|+|++|.++..... ..+..+++|++|+|++|.+++. |... .+ +.|+.|++++|+|++. |..|..
T Consensus 142 ~l~~L~~L~Ls~N~l~~~~~~-----~~~~~l~~L~~L~L~~N~l~~~-~~~~-~l-~~L~~L~Ls~N~l~~l-~~~~~~ 212 (317)
T 3o53_A 142 CRSRVQYLDLKLNEIDTVNFA-----ELAASSDTLEHLNLQYNFIYDV-KGQV-VF-AKLKTLDLSSNKLAFM-GPEFQS 212 (317)
T ss_dssp GGSSEEEEECTTSCCCEEEGG-----GGGGGTTTCCEEECTTSCCCEE-ECCC-CC-TTCCEEECCSSCCCEE-CGGGGG
T ss_pred ccCCCCEEECCCCCCCcccHH-----HHhhccCcCCEEECCCCcCccc-cccc-cc-ccCCEEECCCCcCCcc-hhhhcc
Confidence 888888888888888754332 1234678888888888888844 3322 23 3788888888888854 445888
Q ss_pred cccCCeeeccccccccCCCCCccCcccCceeeCcccccc-ccCCccccCccccchhccc-cceecccCCC
Q 043388 256 LVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQ-GSIPPSLGNLTKLADLALS-FNNLQGNIPS 323 (854)
Q Consensus 256 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~ 323 (854)
+++|+.|+|++|+|++ +|..+..+++|+.|++++|++. +.+|..+..+++|+.|+++ .+.+++..|.
T Consensus 213 l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 213 AAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp GTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred cCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 8899999999999885 5667888889999999999988 7778888888889999888 4455555444
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=6e-30 Score=273.71 Aligned_cols=258 Identities=18% Similarity=0.126 Sum_probs=159.3
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
.++.++++++.+.......+..+++|++|+|++|+|+++.|.+|.++++|++|+|++|++++ ++. |..+++|++|++
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE-TLD--LESLSTLRTLDL 87 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEE-EEE--ETTCTTCCEEEC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCc-chh--hhhcCCCCEEEC
Confidence 34556788888876666677778889999999999998888889999999999999998873 332 666666666666
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDF 200 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 200 (854)
++|+++.+ | ..++|++|++++|+|+++.+.. +++|++|++++|+++.+...
T Consensus 88 s~n~l~~l------------------~----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~---- 138 (317)
T 3o53_A 88 NNNYVQEL------------------L----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDL---- 138 (317)
T ss_dssp CSSEEEEE------------------E----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGB----
T ss_pred cCCccccc------------------c----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccch----
Confidence 66655322 2 2367777777777777665443 34566666666665543221
Q ss_pred hhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccc-cccccCCeeeccccccccCCCCCccC
Q 043388 201 VTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGI-RNLVNLIALTIEVNQLHGIIPDGVGE 279 (854)
Q Consensus 201 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~~~ 279 (854)
.+..+++|++|+|++|.++ +..+..+ ..+++|++|+|++|+|+++.+ ...
T Consensus 139 --~~~~l~~L~~L~Ls~N~l~-------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~ 189 (317)
T 3o53_A 139 --DEGCRSRVQYLDLKLNEID-------------------------TVNFAELAASSDTLEHLNLQYNFIYDVKG--QVV 189 (317)
T ss_dssp --CTGGGSSEEEEECTTSCCC-------------------------EEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCC
T ss_pred --hhhccCCCCEEECCCCCCC-------------------------cccHHHHhhccCcCCEEECCCCcCccccc--ccc
Confidence 2334445555555555554 4444443 245556666666666554422 223
Q ss_pred cccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCccc-CccchhhcchhhhHHH
Q 043388 280 LQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLT-GAIPQQVLSITTLSVY 358 (854)
Q Consensus 280 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~~~~l~~~ 358 (854)
+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ +.+|..+..+..+..
T Consensus 190 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~- 266 (317)
T 3o53_A 190 FAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQT- 266 (317)
T ss_dssp CTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHH-
T ss_pred cccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceE-
Confidence 5666666666666663 3333666666666666666666 34555666666666666666665 445555555555443
Q ss_pred HHhh
Q 043388 359 LALA 362 (854)
Q Consensus 359 l~l~ 362 (854)
++++
T Consensus 267 l~l~ 270 (317)
T 3o53_A 267 VAKQ 270 (317)
T ss_dssp HHHH
T ss_pred EECC
Confidence 5555
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.5e-27 Score=275.07 Aligned_cols=268 Identities=26% Similarity=0.310 Sum_probs=163.0
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
+++.|++++|.|+ .+|..+. ++|++|+|++|.|++ +|. .+++|++|+|++|+|+ .+|. .+++|++|++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV----LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC----CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC----CCCCCCEEEC
Confidence 4777777777777 5666554 677777777777773 443 4667777777777776 5554 3455555555
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDF 200 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 200 (854)
++|+++.+ |. .+++|++|+|++|+|+.+++. +++|++|+|++|+|+.++.
T Consensus 109 s~N~l~~l------------------~~---~l~~L~~L~L~~N~l~~lp~~----l~~L~~L~Ls~N~l~~l~~----- 158 (622)
T 3g06_A 109 FSNPLTHL------------------PA---LPSGLCKLWIFGNQLTSLPVL----PPGLQELSVSDNQLASLPA----- 158 (622)
T ss_dssp CSCCCCCC------------------CC---CCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCSCCCC-----
T ss_pred cCCcCCCC------------------CC---CCCCcCEEECCCCCCCcCCCC----CCCCCEEECcCCcCCCcCC-----
Confidence 54444322 22 345566666666666544321 2455555555555443221
Q ss_pred hhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCc
Q 043388 201 VTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGEL 280 (854)
Q Consensus 201 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 280 (854)
.++ .|+.|++++|.|++ +| ..+++|+.|++++|+|+++. . .+
T Consensus 159 -----~~~-------------------------~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l~-~---~~ 200 (622)
T 3g06_A 159 -----LPS-------------------------ELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASLP-T---LP 200 (622)
T ss_dssp -----CCT-------------------------TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCC-C---CC
T ss_pred -----ccC-------------------------CCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCCC-C---cc
Confidence 112 34455555555553 33 23456666777777766532 2 23
Q ss_pred ccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHH
Q 043388 281 QHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLA 360 (854)
Q Consensus 281 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~ 360 (854)
++|+.|++++|.++ .+|.. +++|+.|+|++|.|++ +| ..+++|+.|++++|+|+ .+|.
T Consensus 201 ~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~------------- 258 (622)
T 3g06_A 201 SELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM------------- 258 (622)
T ss_dssp TTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC-------------
T ss_pred chhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc-------------
Confidence 56777777777776 34432 3567777777777774 44 34567777777777776 2332
Q ss_pred hhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCcc
Q 043388 361 LAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLS 433 (854)
Q Consensus 361 l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 433 (854)
. +.+|+.|+|++|+|+ .+|..|..+++|+.|+|++|.+++.+|..+..++
T Consensus 259 ---------------~-------~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 ---------------L-------PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ---------------C-------CTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ---------------c-------cccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 0 235778888888887 5677788888888888888888887777776655
No 314
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3.5e-28 Score=260.79 Aligned_cols=234 Identities=19% Similarity=0.204 Sum_probs=131.0
Q ss_pred CCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCC
Q 043388 64 RNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTA 143 (854)
Q Consensus 64 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~ 143 (854)
+++++|+|++|.++ .+|..+.++++|++|+|++|+|+ .+|. .|.++++|++|++++|.++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~----------------- 140 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLR----------------- 140 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCC-----------------
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccc-----------------
Confidence 34445555555554 33444444555555555555554 4442 2233444444443333332
Q ss_pred CCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCccc
Q 043388 144 SSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGE 223 (854)
Q Consensus 144 ~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 223 (854)
.+|..|.++++|++|+|++|++.+..|..+... . ....|.++++|++|+|++|+++ .
T Consensus 141 -~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~------~---------------~~~~~~~l~~L~~L~L~~n~l~-~ 197 (328)
T 4fcg_A 141 -ALPASIASLNRLRELSIRACPELTELPEPLAST------D---------------ASGEHQGLVNLQSLRLEWTGIR-S 197 (328)
T ss_dssp -CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE------C----------------CCCEEESTTCCEEEEEEECCC-C
T ss_pred -cCcHHHhcCcCCCEEECCCCCCccccChhHhhc------c---------------chhhhccCCCCCEEECcCCCcC-c
Confidence 235566666777777777766666666554330 0 0012334455555555555555 5
Q ss_pred CChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccC
Q 043388 224 LPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGN 303 (854)
Q Consensus 224 ~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 303 (854)
+|..+..+. .|+.|++++|.+++ +|..+..+++|++|+|++|++.+..|..|+.+++|++|+|++|.+.+.+|..+.+
T Consensus 198 lp~~l~~l~-~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~ 275 (328)
T 4fcg_A 198 LPASIANLQ-NLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHR 275 (328)
T ss_dssp CCGGGGGCT-TCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGG
T ss_pred chHhhcCCC-CCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhc
Confidence 555555554 45566666666653 4445666666666666666666666666666666666666666666666666666
Q ss_pred ccccchhccccceecccCCCCCcCCCCCcccccCCCccc
Q 043388 304 LTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLT 342 (854)
Q Consensus 304 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~ 342 (854)
+++|+.|+|++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 276 l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 276 LTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666666666666666666666666666665554
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4e-29 Score=266.66 Aligned_cols=255 Identities=20% Similarity=0.190 Sum_probs=162.5
Q ss_pred cccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCc-ccChhhhc-------CCCCCceeeecccccccccCc
Q 043388 35 FVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFS-GMFPRWIC-------NISSLEFIYLTVNRFSGSLPF 106 (854)
Q Consensus 35 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~ 106 (854)
.++...+|+.|++++|.+ .+|..+... |++|+|++|+++ ..+|..+. ++++|++|+|++|++++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 345666788888888888 566666544 788888888884 34555554 678888888888888777776
Q ss_pred ccc-cCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCC-----CCCCEEecCCCcCcccCCcCccccCCC
Q 043388 107 DIL-VNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNA-----SNLERLDLSGNQFKGKVSIDFSSLKNL 180 (854)
Q Consensus 107 ~~~-~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l-----~~L~~L~Ls~N~i~~~~~~~f~~l~~L 180 (854)
.+| ..+++|++|++++|+++. +|..+..+ ++|++|+|++|+|+++.+..|..+++|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~------------------~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L 175 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWAT------------------RDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPAL 175 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSS------------------SSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSC
T ss_pred HHHHhcCCCccEEEccCCCCcc------------------hhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCC
Confidence 654 666776666666665542 25566655 888888888888888888888888888
Q ss_pred CeEecccccccCCCCCChhhhhhc--cCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccccccc
Q 043388 181 WWLNLEQNNLGMGTANDLDFVTLL--TNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVN 258 (854)
Q Consensus 181 ~~L~L~~N~l~~~~~~~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~ 258 (854)
++|+|++|++... ...+..+ ..+++|++|+|++|++++ +|.. ....+.++++
T Consensus 176 ~~L~Ls~N~l~~~----~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~---------------------~~~~~~~l~~ 229 (312)
T 1wwl_A 176 STLDLSDNPELGE----RGLISALCPLKFPTLQVLALRNAGMET-PSGV---------------------CSALAAARVQ 229 (312)
T ss_dssp CEEECCSCTTCHH----HHHHHHSCTTSCTTCCEEECTTSCCCC-HHHH---------------------HHHHHHTTCC
T ss_pred CEEECCCCCcCcc----hHHHHHHHhccCCCCCEEECCCCcCcc-hHHH---------------------HHHHHhcCCC
Confidence 8888888886421 1122223 677788888888887762 2111 1112234455
Q ss_pred CCeeeccccccccCCC-CCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccC
Q 043388 259 LIALTIEVNQLHGIIP-DGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDAS 337 (854)
Q Consensus 259 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls 337 (854)
|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+++
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~ 304 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLK 304 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECT
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEecc
Confidence 5555555555555443 33444556666666666665 4454444 5666666666666643 43 5666666666666
Q ss_pred CCccc
Q 043388 338 HNKLT 342 (854)
Q Consensus 338 ~N~l~ 342 (854)
+|+++
T Consensus 305 ~N~l~ 309 (312)
T 1wwl_A 305 GNPFL 309 (312)
T ss_dssp TCTTT
T ss_pred CCCCC
Confidence 66665
No 316
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.9e-30 Score=301.12 Aligned_cols=418 Identities=13% Similarity=0.071 Sum_probs=267.3
Q ss_pred cccCchhhhcCCCCCEEecccccc---cccCCcccc------------CcCCCCeeecccccccccCCcCccCC--CCCc
Q 043388 5 EGQIPEEIGSLLNLQTLAIDFNYL---TGQLPDFVG------------NLSALGMLLIRWNSLGGQIPTTLGLL--RNLV 67 (854)
Q Consensus 5 ~~~~p~~~~~l~~L~~L~L~~n~l---~~~~~~~~~------------~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~ 67 (854)
...++..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..+... .+|+
T Consensus 62 ~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~ 141 (592)
T 3ogk_B 62 TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLE 141 (592)
T ss_dssp GSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCC
T ss_pred ccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCc
Confidence 334455678889999999987543 124444433 67888999999888877666666653 4489
Q ss_pred EEeccccc-Ccc-cChhhhcCCCCCceeeecccccccccC---cccccCCCCCcEEEcccCCCCCCceeeccCccCCCCC
Q 043388 68 YLNVAENQ-FSG-MFPRWICNISSLEFIYLTVNRFSGSLP---FDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGT 142 (854)
Q Consensus 68 ~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~ 142 (854)
+|+|++|. ++. .++....++++|++|+|++|.+++.-. ...+.++++|++|+++.|.+..+ .
T Consensus 142 ~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~-------------~ 208 (592)
T 3ogk_B 142 TLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKI-------------S 208 (592)
T ss_dssp EEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSC-------------C
T ss_pred EEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCcc-------------C
Confidence 99998886 221 123334578889999999888763311 12345667777777776665421 1
Q ss_pred CCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcc
Q 043388 143 ASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGG 222 (854)
Q Consensus 143 ~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 222 (854)
...++..+.++++|++|+|++|.+.++ +..+..+++|++|+++.+...... ......+..+++|+.|+++++...
T Consensus 209 ~~~l~~~~~~~~~L~~L~L~~~~~~~l-~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~l~~~~~L~~L~l~~~~~~- 283 (592)
T 3ogk_B 209 PKDLETIARNCRSLVSVKVGDFEILEL-VGFFKAAANLEEFCGGSLNEDIGM---PEKYMNLVFPRKLCRLGLSYMGPN- 283 (592)
T ss_dssp HHHHHHHHHHCTTCCEEECSSCBGGGG-HHHHHHCTTCCEEEECBCCCCTTC---TTSSSCCCCCTTCCEEEETTCCTT-
T ss_pred HHHHHHHHhhCCCCcEEeccCccHHHH-HHHHhhhhHHHhhcccccccccch---HHHHHHhhccccccccCccccchh-
Confidence 123455566778888888888888764 466777888888888753322110 112234666777888888776443
Q ss_pred cCChhhhhhcccccEEEccCCcccccCC-ccccccccCCeeeccccccccCCCCCccCcccCceeeCc-----------c
Q 043388 223 ELPHSIANLSSTMIQFRIGGNQISGTIP-SGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMF-----------R 290 (854)
Q Consensus 223 ~~p~~~~~l~~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~-----------~ 290 (854)
.+|..+..++ +|+.|++++|.+++... ..+.++++|+.|+++++......+..+..+++|++|+++ .
T Consensus 284 ~l~~~~~~~~-~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~ 362 (592)
T 3ogk_B 284 EMPILFPFAA-QIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEE 362 (592)
T ss_dssp TGGGGGGGGG-GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTT
T ss_pred HHHHHHhhcC-CCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCcccccccccc
Confidence 5666666654 68888888887665433 335677788888887332222233334567778888887 3
Q ss_pred ccccccC-CccccCccccchhccccceecccCCCCCcC-CCCCcccccC----CCcccCc-----cchhhcchhhhHHHH
Q 043388 291 NFLQGSI-PPSLGNLTKLADLALSFNNLQGNIPSSLGN-CQNLKGFDAS----HNKLTGA-----IPQQVLSITTLSVYL 359 (854)
Q Consensus 291 N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~ls----~N~l~~~-----~p~~~~~~~~l~~~l 359 (854)
|.+++.. +..+..+++|+.|+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+..+.. +
T Consensus 363 ~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~-L 441 (592)
T 3ogk_B 363 GLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRR-F 441 (592)
T ss_dssp CCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCE-E
T ss_pred CccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCE-E
Confidence 5555432 222345677888888777777655555554 7778888875 5666642 2222333333332 5
Q ss_pred HhhcC--CCCCCcCccccccccccccccccceeeccCcccccC-CCcccccCCCCCEEEccCcccccc-cchhhcCccCC
Q 043388 360 ALAHN--LLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGV-IPFSLGFMKSIKELNVSSNNLSGQ-IPEFLQNLSFL 435 (854)
Q Consensus 360 ~l~~n--~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L 435 (854)
+++++ .+++..+..++. .+++|++|+|++|++++. ++..+..+++|++|+|++|.+++. ++..+..+++|
T Consensus 442 ~L~~~~~~l~~~~~~~~~~------~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L 515 (592)
T 3ogk_B 442 AFYLRQGGLTDLGLSYIGQ------YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSL 515 (592)
T ss_dssp EEECCGGGCCHHHHHHHHH------SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSC
T ss_pred EEecCCCCccHHHHHHHHH------hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCcc
Confidence 55432 233332222221 256799999999999763 344567889999999999998754 45556788999
Q ss_pred CeeecccccCccc
Q 043388 436 EFLNLSYNHLEGE 448 (854)
Q Consensus 436 ~~L~ls~N~l~~~ 448 (854)
+.|+|++|+++..
T Consensus 516 ~~L~ls~n~it~~ 528 (592)
T 3ogk_B 516 RYLWVQGYRASMT 528 (592)
T ss_dssp CEEEEESCBCCTT
T ss_pred CeeECcCCcCCHH
Confidence 9999999998764
No 317
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.5e-28 Score=262.20 Aligned_cols=254 Identities=18% Similarity=0.194 Sum_probs=204.9
Q ss_pred hhhcCCCCCEEecccccccccCCccccCcCCCCeeeccccccc-ccCCcCcc-------CCCCCcEEecccccCcccChh
Q 043388 11 EIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLG-GQIPTTLG-------LLRNLVYLNVAENQFSGMFPR 82 (854)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~-------~l~~L~~L~Ls~N~l~~~~p~ 82 (854)
.++..++|++|++++|.+ .+|..+... |+.|+|++|.++ ..+|..+. .+++|++|+|++|++++..|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 346678899999999999 688877654 999999999994 45666665 789999999999999988888
Q ss_pred hh--cCCCCCceeeecccccccccCcccccCC-----CCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCC
Q 043388 83 WI--CNISSLEFIYLTVNRFSGSLPFDILVNL-----PNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASN 155 (854)
Q Consensus 83 ~~--~~l~~L~~L~L~~N~l~~~~~~~~~~~l-----~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~ 155 (854)
.+ ..+++|++|+|++|+|+ .+| ..|..+ ++|++|++++|++..+ .|..|+++++
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~-~~~-~~~~~l~~~~~~~L~~L~L~~N~l~~~-----------------~~~~~~~l~~ 174 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWA-TRD-AWLAELQQWLKPGLKVLSIAQAHSLNF-----------------SCEQVRVFPA 174 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCS-SSS-SHHHHHHTTCCTTCCEEEEESCSCCCC-----------------CTTTCCCCSS
T ss_pred HHHHhcCCCccEEEccCCCCc-chh-HHHHHHHHhhcCCCcEEEeeCCCCccc-----------------hHHHhccCCC
Confidence 76 89999999999999998 455 556665 6777777777666433 3578999999
Q ss_pred CCEEecCCCcCcccC--Cc--CccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhh
Q 043388 156 LERLDLSGNQFKGKV--SI--DFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANL 231 (854)
Q Consensus 156 L~~L~Ls~N~i~~~~--~~--~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 231 (854)
|++|+|++|++.+.. +. .|..+++|++|+|++|+|+.++. .....+.++++|++|+|++|++++..|......
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSG---VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHH---HHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHH---HHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 999999999987642 22 34889999999999999974321 112345688999999999999997775433332
Q ss_pred cccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccc
Q 043388 232 SSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQG 295 (854)
Q Consensus 232 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 295 (854)
.+.|+.|++++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|++++
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 348999999999999 7777776 8999999999999987 55 9999999999999999985
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=9.6e-28 Score=271.52 Aligned_cols=234 Identities=16% Similarity=0.173 Sum_probs=148.0
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
+|++|+|++|.|++..|..|+.+++|++|+|++|.|++..| |..+++|++|+|++|+|+ .+|. .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEE-EEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCC-CCCC-----CCCcCEEEC
Confidence 56666666666665555566666666666666666665444 666666666666666665 3332 144444444
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDF 200 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 200 (854)
++|.+..+ |. ..+++|++|+|++|+|+++.|..|..+++|++|+|++|.|+.....
T Consensus 107 ~~N~l~~~------------------~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---- 162 (487)
T 3oja_A 107 ANNNISRV------------------SC--SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA---- 162 (487)
T ss_dssp CSSCCCCE------------------EE--CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGG----
T ss_pred cCCcCCCC------------------Cc--cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChH----
Confidence 44444322 11 1245677777777777766666677777777777777776543221
Q ss_pred hhhc-cCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccC
Q 043388 201 VTLL-TNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGE 279 (854)
Q Consensus 201 ~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 279 (854)
.+ ..+++|++|+|++|.+++..+ . ..+ +.|+.|+|++|.|++..| .|..+++|+.|+|++|+|++ +|..+..
T Consensus 163 --~l~~~l~~L~~L~Ls~N~l~~~~~-~-~~l-~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 163 --ELAASSDTLEHLNLQYNFIYDVKG-Q-VVF-AKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp --GGGGGTTTCCEEECTTSCCCEEEC-C-CCC-TTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred --HHhhhCCcccEEecCCCccccccc-c-ccC-CCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 23 256677777777777764422 1 123 357777777777775433 47778888888888888885 4566778
Q ss_pred cccCceeeCcccccc-ccCCccccCccccchhccc
Q 043388 280 LQHLQQLYMFRNFLQ-GSIPPSLGNLTKLADLALS 313 (854)
Q Consensus 280 l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 313 (854)
+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 888888888888887 5667777777888877776
No 319
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=9.4e-29 Score=283.40 Aligned_cols=185 Identities=13% Similarity=0.001 Sum_probs=128.7
Q ss_pred ccCCCcceEEEEeEECCCceEEEEEEeeccc----------ccchHHHHHHHHHHHhc-cCCCeeeEEEEeeccCCCCCc
Q 043388 555 MIGQGSFGSVYKGILGGEEMIVAVKVINLKQ----------KGAFRSFVAECEALRNI-RHRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 555 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 623 (854)
..+.|+.|.+..++..-.|..||+|++.... ....+++.+|+++|+++ .|+||+++++++++..
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~----- 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ----- 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-----
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-----
Confidence 4567777777777776677889999996432 12245699999999999 7999999999998766
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-cc
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NF 702 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Df 702 (854)
..||||||++|++|.++|...+ +++.. +|+.||+.||+|+|++ |||||||||+|||++.++.+|+ ||
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 7899999999999999998765 45543 5899999999999999 9999999999999999987776 99
Q ss_pred ccccccccCCCCCCcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 043388 703 SLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRP 760 (854)
Q Consensus 703 g~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~p 760 (854)
|+|+........ ....+||+.|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 384 GlAr~~~~~~~~---~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 384 GSIVTTPQDCSW---PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TTEESCC---CC---SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccCeeCCCCCcc---ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 999877554332 223579999999999876 467789999999998877665444
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=4.6e-27 Score=265.94 Aligned_cols=234 Identities=19% Similarity=0.152 Sum_probs=162.9
Q ss_pred ccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCC
Q 043388 60 LGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLG 139 (854)
Q Consensus 60 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~ 139 (854)
...+++|++|+|++|.|+++.|.+|.++++|++|+|++|.|++..| |..+++|++|++++|.++.+
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l----------- 95 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQEL----------- 95 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEE-----------
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCC-----------
Confidence 3445588888888888888888888888888888888888874332 45555555555554443321
Q ss_pred CCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCc
Q 043388 140 MGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQ 219 (854)
Q Consensus 140 ~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 219 (854)
| ..++|++|+|++|+|+++++. .+++|+.|+|++|.
T Consensus 96 -------~----~~~~L~~L~L~~N~l~~~~~~---------------------------------~l~~L~~L~L~~N~ 131 (487)
T 3oja_A 96 -------L----VGPSIETLHAANNNISRVSCS---------------------------------RGQGKKNIYLANNK 131 (487)
T ss_dssp -------E----ECTTCCEEECCSSCCCCEEEC---------------------------------CCSSCEEEECCSSC
T ss_pred -------C----CCCCcCEEECcCCcCCCCCcc---------------------------------ccCCCCEEECCCCC
Confidence 1 125555555555555544332 23456666666666
Q ss_pred CcccCChhhhhhcccccEEEccCCcccccCCcccc-ccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCC
Q 043388 220 FGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIR-NLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIP 298 (854)
Q Consensus 220 l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 298 (854)
+++..|..+..++ .|+.|+|++|.+++..|..|. .+++|+.|+|++|.|+++.+ +..+++|+.|+|++|.+++.+|
T Consensus 132 l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 132 ITMLRDLDEGCRS-RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp CCSGGGBCGGGGS-SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCchhhcCCC-CCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH
Confidence 6655566666654 677777777777777777765 67888888888888887633 3458888889999998886444
Q ss_pred ccccCccccchhccccceecccCCCCCcCCCCCcccccCCCccc-CccchhhcchhhhH
Q 043388 299 PSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLT-GAIPQQVLSITTLS 356 (854)
Q Consensus 299 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~~~~l~ 356 (854)
.+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.+. +.+|..+..+..+.
T Consensus 209 -~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~ 265 (487)
T 3oja_A 209 -EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (487)
T ss_dssp -GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHH
T ss_pred -hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCc
Confidence 48888899999999999985 6777888899999999999887 55555555554443
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.5e-25 Score=234.79 Aligned_cols=224 Identities=19% Similarity=0.199 Sum_probs=127.9
Q ss_pred EEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccc
Q 043388 20 TLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNR 99 (854)
Q Consensus 20 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 99 (854)
..+.++..++ .+|..+. ++|++|++++|++++..+..|..+++|++|+|++|+++++.+.+|.++++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4566666666 5666554 467777777777776666677777777777777777776666677777777777777777
Q ss_pred cccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCC
Q 043388 100 FSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKN 179 (854)
Q Consensus 100 l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~ 179 (854)
++ .++...|.++++|++|+++. |+++++.+..|..+++
T Consensus 88 l~-~~~~~~~~~l~~L~~L~l~~-----------------------------------------n~l~~~~~~~~~~l~~ 125 (276)
T 2z62_A 88 IQ-SLALGAFSGLSSLQKLVAVE-----------------------------------------TNLASLENFPIGHLKT 125 (276)
T ss_dssp CC-EECTTTTTTCTTCCEEECTT-----------------------------------------SCCCCSTTCCCTTCTT
T ss_pred cC-ccChhhhcCCccccEEECCC-----------------------------------------CCccccCchhcccCCC
Confidence 76 44444444444444444444 4444444334444444
Q ss_pred CCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhccccc----EEEccCCcccccCCccccc
Q 043388 180 LWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMI----QFRIGGNQISGTIPSGIRN 255 (854)
Q Consensus 180 L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~----~L~l~~N~l~~~~~~~~~~ 255 (854)
|++|+|++|.++.+. ++..+.++++|++|+|++|++++..+..+..+. .++ .|++++|.+++..+..+..
T Consensus 126 L~~L~l~~n~l~~~~-----l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~l~L~ls~n~l~~~~~~~~~~ 199 (276)
T 2z62_A 126 LKELNVAHNLIQSFK-----LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH-QMPLLNLSLDLSLNPMNFIQPGAFKE 199 (276)
T ss_dssp CCEEECCSSCCCCCC-----CCGGGGGCTTCCEEECCSSCCCEECGGGGHHHH-TCTTCCEEEECCSSCCCEECTTSSCS
T ss_pred CCEEECcCCccceec-----CchhhccCCCCCEEECCCCCCCcCCHHHhhhhh-hccccceeeecCCCcccccCccccCC
Confidence 444444444443221 112344445555555555555544444444443 333 5556666665444443333
Q ss_pred cccCCeeeccccccccCCCCCccCcccCceeeCccccccc
Q 043388 256 LVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQG 295 (854)
Q Consensus 256 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 295 (854)
.+|++|+|++|+++++.+..|..+++|+.|++++|++.+
T Consensus 200 -~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 200 -IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp -CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred -CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 356666666666666655556666666666666666654
No 322
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=2.1e-28 Score=286.46 Aligned_cols=391 Identities=17% Similarity=0.126 Sum_probs=285.2
Q ss_pred hcCCCCCEEecccccccccCCccccCc--CCCCeeeccccc-ccc-cCCcCccCCCCCcEEecccccCccc----Chhhh
Q 043388 13 GSLLNLQTLAIDFNYLTGQLPDFVGNL--SALGMLLIRWNS-LGG-QIPTTLGLLRNLVYLNVAENQFSGM----FPRWI 84 (854)
Q Consensus 13 ~~l~~L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~ 84 (854)
..+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. .++..+..+++|++|+|++|.+++. ++..+
T Consensus 109 ~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 109 NNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHH
Confidence 389999999999999987777777664 459999999987 221 1233345789999999999998866 45567
Q ss_pred cCCCCCceeeecccccccccC----cccccCCCCCcEEEcccCCC----------CCCceeeccCccCCCCCCCCCCccc
Q 043388 85 CNISSLEFIYLTVNRFSGSLP----FDILVNLPNLKELYLTFCSL----------KNLWWLNLEQNNLGMGTASSIPDSL 150 (854)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~~----~~~~~~l~~L~~L~l~~n~l----------~~L~~L~L~~N~l~~~~~~~~p~~~ 150 (854)
.++++|++|+|++|+++ .+. ..++.++++|++|+++.|.+ ++|+.|+++..... ......+..+
T Consensus 189 ~~~~~L~~L~L~~n~~~-~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFA-KISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNED-IGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCS-SCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCC-TTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCC-ccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccc-cchHHHHHHh
Confidence 78999999999999986 232 23456889999999998864 57889999864321 1123455678
Q ss_pred cCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhh
Q 043388 151 SNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIAN 230 (854)
Q Consensus 151 ~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 230 (854)
..+++|+.|+++++... ..+..+..+++|++|+|++|.++. ..+...+..+++|++|+++ |.+.......+..
T Consensus 267 ~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~-----~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~ 339 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLET-----EDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQ 339 (592)
T ss_dssp CCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCH-----HHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHH
T ss_pred hccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCH-----HHHHHHHHhCcCCCEEecc-CccCHHHHHHHHH
Confidence 88999999999997554 556778899999999999999642 2233457899999999999 5555333333433
Q ss_pred hcccccEEEcc-----------CCcccccCC-ccccccccCCeeeccccccccCCCCCccC-cccCceeeCc----cccc
Q 043388 231 LSSTMIQFRIG-----------GNQISGTIP-SGIRNLVNLIALTIEVNQLHGIIPDGVGE-LQHLQQLYMF----RNFL 293 (854)
Q Consensus 231 l~~~L~~L~l~-----------~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l 293 (854)
..++|+.|+++ .|.+++... ..+.++++|++|+++.|++++..+..+.. +++|+.|+++ .|.+
T Consensus 340 ~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l 419 (592)
T 3ogk_B 340 YCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERI 419 (592)
T ss_dssp HCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCC
T ss_pred hCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccc
Confidence 33479999999 467765433 33456899999999999998766666655 8999999996 7788
Q ss_pred ccc-----CCccccCccccchhccccce--ecccCCCCCc-CCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCC
Q 043388 294 QGS-----IPPSLGNLTKLADLALSFNN--LQGNIPSSLG-NCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNL 365 (854)
Q Consensus 294 ~~~-----~~~~~~~l~~L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~ 365 (854)
++. ++..+.++++|+.|++++|. +++..+..+. .+++|+.|++++|++++....
T Consensus 420 ~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~------------------ 481 (592)
T 3ogk_B 420 TDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM------------------ 481 (592)
T ss_dssp SSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH------------------
T ss_pred cCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH------------------
Confidence 753 33446778999999998543 6554444443 488999999999998731110
Q ss_pred CCCCcCccccccccccccccccceeeccCcccccC-CCcccccCCCCCEEEccCcccccccchhh-cCccCCCeeecccc
Q 043388 366 LNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGV-IPFSLGFMKSIKELNVSSNNLSGQIPEFL-QNLSFLEFLNLSYN 443 (854)
Q Consensus 366 l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 443 (854)
..+.. +++|++|+|++|.+++. ++..+..+++|++|+|++|+++..--..+ ..++.+....+..+
T Consensus 482 ------~~~~~-------~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 482 ------EFSRG-------CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp ------HHHTC-------CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred ------HHHhc-------CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 00111 45799999999998754 34445679999999999999986533333 35676666655554
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.7e-25 Score=234.42 Aligned_cols=214 Identities=21% Similarity=0.240 Sum_probs=170.1
Q ss_pred cCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcC
Q 043388 7 QIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICN 86 (854)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 86 (854)
.+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++++.+.+|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4676665 48999999999999877779999999999999999999888889999999999999999999999999999
Q ss_pred CCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcC
Q 043388 87 ISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQF 166 (854)
Q Consensus 87 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i 166 (854)
+++|++|++++|+++ .++...|.++++|++|++++|+++.+ .+|..|.++++|++|+|++|+|
T Consensus 99 l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~----------------~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 99 LSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSF----------------KLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp CTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCC----------------CCCGGGGGCTTCCEEECCSSCC
T ss_pred CccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCcccee----------------cCchhhccCCCCCEEECCCCCC
Confidence 999999999999998 67766688888888888877776543 2578888899999999999999
Q ss_pred cccCCcCccccCCCC----eEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccC
Q 043388 167 KGKVSIDFSSLKNLW----WLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGG 242 (854)
Q Consensus 167 ~~~~~~~f~~l~~L~----~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~ 242 (854)
+++.+..|..+++|+ +|++++|.++.++ +..+. .. +|+.|++++
T Consensus 162 ~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~------------------------------~~~~~-~~-~L~~L~L~~ 209 (276)
T 2z62_A 162 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQ------------------------------PGAFK-EI-RLKELALDT 209 (276)
T ss_dssp CEECGGGGHHHHTCTTCCEEEECCSSCCCEEC------------------------------TTSSC-SC-CEEEEECCS
T ss_pred CcCCHHHhhhhhhccccceeeecCCCcccccC------------------------------ccccC-CC-cccEEECCC
Confidence 888777777666665 4555555554332 22222 22 466666666
Q ss_pred CcccccCCccccccccCCeeecccccccc
Q 043388 243 NQISGTIPSGIRNLVNLIALTIEVNQLHG 271 (854)
Q Consensus 243 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 271 (854)
|++++..+..|.++++|+.|+|++|+++.
T Consensus 210 n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 210 NQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp SCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CceeecCHhHhcccccccEEEccCCcccc
Confidence 66665556667778888888888888774
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=5.2e-28 Score=283.18 Aligned_cols=410 Identities=14% Similarity=0.113 Sum_probs=206.9
Q ss_pred hhhhcCCCCCEEecccccccc---cCCc------------cccCcCCCCeeecccccccccCCcCcc-CCCCCcEEeccc
Q 043388 10 EEIGSLLNLQTLAIDFNYLTG---QLPD------------FVGNLSALGMLLIRWNSLGGQIPTTLG-LLRNLVYLNVAE 73 (854)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~l~~---~~~~------------~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~ 73 (854)
..+..+++|++|+|++|.... ..|. .+..+++|++|+|++|.+++..+..+. .+++|++|+|++
T Consensus 60 ~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~ 139 (594)
T 2p1m_B 60 TVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSS 139 (594)
T ss_dssp HHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCC
Confidence 356788999999999876321 1221 134677899999999999877777775 689999999999
Q ss_pred c-cCccc-ChhhhcCCCCCceeeecccccccccCc---ccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCc
Q 043388 74 N-QFSGM-FPRWICNISSLEFIYLTVNRFSGSLPF---DILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPD 148 (854)
Q Consensus 74 N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~ 148 (854)
| .++.. ++..+.++++|++|+|++|.+++..+. .....+++|++|++++|. ..+ ....++.
T Consensus 140 ~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~-------------~~~~l~~ 205 (594)
T 2p1m_B 140 CEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEV-------------SFSALER 205 (594)
T ss_dssp CEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCC-------------CHHHHHH
T ss_pred cCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcC-------------CHHHHHH
Confidence 9 56543 455556899999999999998732221 223366688888887765 111 0011112
Q ss_pred cccCCCCCCEEecCCC-cCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEE-EcccCcCcccCCh
Q 043388 149 SLSNASNLERLDLSGN-QFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKAL-SLCDNQFGGELPH 226 (854)
Q Consensus 149 ~~~~l~~L~~L~Ls~N-~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L-~L~~N~l~~~~p~ 226 (854)
.+.++++|++|+|++| .+.+ .+..+..+++|++|+++.+........-...+..+.++++|+.| .+.+... +.+|.
T Consensus 206 l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~ 283 (594)
T 2p1m_B 206 LVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-AYLPA 283 (594)
T ss_dssp HHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-GGGGG
T ss_pred HHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-hhHHH
Confidence 2233455666666555 3332 34445555555555544332100000000112234455555555 2222221 12333
Q ss_pred hhhhhcccccEEEccCCcccccCCc-cccccccCCeeeccccccccC-CCCCccCcccCceeeC---------ccccccc
Q 043388 227 SIANLSSTMIQFRIGGNQISGTIPS-GIRNLVNLIALTIEVNQLHGI-IPDGVGELQHLQQLYM---------FRNFLQG 295 (854)
Q Consensus 227 ~~~~l~~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L---------~~N~l~~ 295 (854)
.+..++ +|+.|++++|.+++.... .+..+++|+.|++++| ++.. .+.....+++|++|++ ..|.+++
T Consensus 284 ~~~~~~-~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~ 361 (594)
T 2p1m_B 284 VYSVCS-RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTE 361 (594)
T ss_dssp GHHHHT-TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCH
T ss_pred HHHhhC-CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCH
Confidence 322332 455555555554432211 1334455555555554 2211 1111123445555544 2233332
Q ss_pred cCCcccc-CccccchhccccceecccCCCCCc-CCCCCcccccC--C----CcccCccch------hhcchhhhHHHHHh
Q 043388 296 SIPPSLG-NLTKLADLALSFNNLQGNIPSSLG-NCQNLKGFDAS--H----NKLTGAIPQ------QVLSITTLSVYLAL 361 (854)
Q Consensus 296 ~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~ls--~----N~l~~~~p~------~~~~~~~l~~~l~l 361 (854)
.....+. .+++|+.|+++.|.+++..+..+. .+++|+.|+++ + |.++. .|. .+..+..+.. |++
T Consensus 362 ~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~-~~~~~~~~~l~~~~~~L~~-L~L 439 (594)
T 2p1m_B 362 QGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL-EPLDIGFGAIVEHCKDLRR-LSL 439 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC-CCTHHHHHHHHHHCTTCCE-EEC
T ss_pred HHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC-CchhhHHHHHHhhCCCccE-Eee
Confidence 2111221 244555555555555433333332 24555555555 2 23321 110 0111111111 222
Q ss_pred hcCCCCCCcCccccccccccccccccceeeccCcccccCCCccc-ccCCCCCEEEccCcccccccch-hhcCccCCCeee
Q 043388 362 AHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSL-GFMKSIKELNVSSNNLSGQIPE-FLQNLSFLEFLN 439 (854)
Q Consensus 362 ~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 439 (854)
++ .+++..+..++. .+.+|++|+|++|.+++..+..+ ..+++|++|+|++|.+++..+. .+..+++|+.|+
T Consensus 440 ~~-~l~~~~~~~l~~------~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 512 (594)
T 2p1m_B 440 SG-LLTDKVFEYIGT------YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLW 512 (594)
T ss_dssp CS-SCCHHHHHHHHH------HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEE
T ss_pred cC-cccHHHHHHHHH------hchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEe
Confidence 22 111111111111 14568888888888765544444 5678888888888888644443 344577888888
Q ss_pred cccccCc
Q 043388 440 LSYNHLE 446 (854)
Q Consensus 440 ls~N~l~ 446 (854)
+++|+++
T Consensus 513 l~~~~~~ 519 (594)
T 2p1m_B 513 MSSCSVS 519 (594)
T ss_dssp EESSCCB
T ss_pred eeCCCCC
Confidence 8888774
No 325
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.3e-24 Score=224.78 Aligned_cols=203 Identities=22% Similarity=0.279 Sum_probs=122.3
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
+.+++++++++++ .+|..+. +++++|+|++|+|++..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4667777777777 4665554 466777777777765555567777777777777777766555666667777777777
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+++ .+|...|.++++|++|++++|+++.+ .|..|.++++|++|+|++|+|+++++..|..
T Consensus 94 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 155 (270)
T 2o6q_A 94 DNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSL-----------------PPRVFDSLTKLTYLSLGYNELQSLPKGVFDK 155 (270)
T ss_dssp SSCCC-CCCTTTTTTCSSCCEEECCSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCcCC-cCCHhHcccccCCCEEECCCCccCee-----------------CHHHhCcCcCCCEEECCCCcCCccCHhHccC
Confidence 77666 56655555555555555555544332 2334555566666666666665555555555
Q ss_pred cCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccccc
Q 043388 177 LKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNL 256 (854)
Q Consensus 177 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l 256 (854)
+++|++|+|++|+++.++ +..|..++ .|+.|++++|+|++..+..|..+
T Consensus 156 l~~L~~L~L~~n~l~~~~------------------------------~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l 204 (270)
T 2o6q_A 156 LTSLKELRLYNNQLKRVP------------------------------EGAFDKLT-ELKTLKLDNNQLKRVPEGAFDSL 204 (270)
T ss_dssp CTTCCEEECCSSCCSCCC------------------------------TTTTTTCT-TCCEEECCSSCCSCCCTTTTTTC
T ss_pred CcccceeEecCCcCcEeC------------------------------hhHhccCC-CcCEEECCCCcCCcCCHHHhccc
Confidence 555555555555554433 33333333 45555555555554555556677
Q ss_pred ccCCeeecccccccc
Q 043388 257 VNLIALTIEVNQLHG 271 (854)
Q Consensus 257 ~~L~~L~L~~N~l~~ 271 (854)
++|+.|+|++|.+..
T Consensus 205 ~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 205 EKLKMLQLQENPWDC 219 (270)
T ss_dssp TTCCEEECCSSCBCC
T ss_pred cCCCEEEecCCCeeC
Confidence 777777777777753
No 326
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=4.2e-28 Score=283.96 Aligned_cols=396 Identities=16% Similarity=0.184 Sum_probs=262.4
Q ss_pred hhhhcCCCCCEEecccccccccCCcccc-CcCCCCeeecccc-ccccc-CCcCccCCCCCcEEecccccCcccChhhhc-
Q 043388 10 EEIGSLLNLQTLAIDFNYLTGQLPDFVG-NLSALGMLLIRWN-SLGGQ-IPTTLGLLRNLVYLNVAENQFSGMFPRWIC- 85 (854)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 85 (854)
.-+..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+.++.
T Consensus 99 ~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~ 178 (594)
T 2p1m_B 99 AMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH 178 (594)
T ss_dssp HHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG
T ss_pred HHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH
Confidence 3456789999999999999877777775 6899999999999 66532 455556899999999999999877666555
Q ss_pred ---CCCCCceeeecccccccccCcc----cccCCCCCcEEEcccC-----------CCCCCceeeccCccC--CCCCCCC
Q 043388 86 ---NISSLEFIYLTVNRFSGSLPFD----ILVNLPNLKELYLTFC-----------SLKNLWWLNLEQNNL--GMGTASS 145 (854)
Q Consensus 86 ---~l~~L~~L~L~~N~l~~~~~~~----~~~~l~~L~~L~l~~n-----------~l~~L~~L~L~~N~l--~~~~~~~ 145 (854)
.+++|++|+|++|. . .++.. ++.++++|++|++++| .+.+|+.|+++.+.. .......
T Consensus 179 ~~~~~~~L~~L~l~~~~-~-~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 256 (594)
T 2p1m_B 179 FPDTYTSLVSLNISCLA-S-EVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG 256 (594)
T ss_dssp SCTTCCCCCEEECTTCC-S-CCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH
T ss_pred HhhcCCcCcEEEecccC-C-cCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH
Confidence 66799999999997 2 33333 3345699999999987 356777777554321 1111133
Q ss_pred CCccccCCCCCCEE-ecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccC
Q 043388 146 IPDSLSNASNLERL-DLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGEL 224 (854)
Q Consensus 146 ~p~~~~~l~~L~~L-~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 224 (854)
++..+.++++|+.| .+.+.... ..+..+..+++|++|+|++|.++. ..+...+..+++|++|++++| ++...
T Consensus 257 l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~L~~~~l~~-----~~l~~~~~~~~~L~~L~l~~~-~~~~~ 329 (594)
T 2p1m_B 257 LSVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLNLSYATVQS-----YDLVKLLCQCPKLQRLWVLDY-IEDAG 329 (594)
T ss_dssp HHHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEECTTCCCCH-----HHHHHHHTTCTTCCEEEEEGG-GHHHH
T ss_pred HHHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEEccCCCCCH-----HHHHHHHhcCCCcCEEeCcCc-cCHHH
Confidence 45567778888888 44443332 234444567888888888888542 123344667888888888887 44332
Q ss_pred ChhhhhhcccccEEEcc---------CCcccccCCcccc-ccccCCeeeccccccccCCCCCcc-CcccCceeeCc--c-
Q 043388 225 PHSIANLSSTMIQFRIG---------GNQISGTIPSGIR-NLVNLIALTIEVNQLHGIIPDGVG-ELQHLQQLYMF--R- 290 (854)
Q Consensus 225 p~~~~~l~~~L~~L~l~---------~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~- 290 (854)
...+....++|+.|++. .+.+++.....+. ++++|+.|.++.|++++.....+. .+++|+.|+++ +
T Consensus 330 l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~ 409 (594)
T 2p1m_B 330 LEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEP 409 (594)
T ss_dssp HHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESST
T ss_pred HHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccC
Confidence 23333322368888873 3455543333333 477888888888887765444443 47788888887 3
Q ss_pred ---cccccc-----CCccccCccccchhccccceecccCCCCCcC-CCCCcccccCCCcccCccchhhcchhhhHHHHHh
Q 043388 291 ---NFLQGS-----IPPSLGNLTKLADLALSFNNLQGNIPSSLGN-CQNLKGFDASHNKLTGAIPQQVLSITTLSVYLAL 361 (854)
Q Consensus 291 ---N~l~~~-----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l 361 (854)
|.++.. ++..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..
T Consensus 410 ~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~------------- 475 (594)
T 2p1m_B 410 KAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHH------------- 475 (594)
T ss_dssp TCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHH-------------
T ss_pred CCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHH-------------
Confidence 455521 112255667788888876 555444444444 677888888888775321111
Q ss_pred hcCCCCCCcCccccccccccccccccceeeccCcccccCCCc-ccccCCCCCEEEccCcccccccchhh-cCccCCCeee
Q 043388 362 AHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPF-SLGFMKSIKELNVSSNNLSGQIPEFL-QNLSFLEFLN 439 (854)
Q Consensus 362 ~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ 439 (854)
+ ...+++|++|+|++|.+++.... ....+++|++|++++|+++......+ ..+++|+...
T Consensus 476 ------------l------~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~ 537 (594)
T 2p1m_B 476 ------------V------LSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEV 537 (594)
T ss_dssp ------------H------HHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEE
T ss_pred ------------H------HhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEE
Confidence 0 00156799999999999654443 34568999999999999965444445 5567777766
Q ss_pred cccccCc
Q 043388 440 LSYNHLE 446 (854)
Q Consensus 440 ls~N~l~ 446 (854)
+..+.-.
T Consensus 538 ~~~~~~~ 544 (594)
T 2p1m_B 538 IDERGAP 544 (594)
T ss_dssp ECSSSCG
T ss_pred ecCCCcc
Confidence 6665443
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=2.7e-25 Score=231.89 Aligned_cols=228 Identities=20% Similarity=0.214 Sum_probs=124.6
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
.+..+++..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|+|++|+++ .++ .+..
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~-~~~--~l~~--------- 83 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLH-DIS--ALKE--------- 83 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCC-CCG--GGTT---------
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCC-Cch--hhcC---------
Confidence 445556666665532 334556666666666666663 2 23566666666666666665 222 2333
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDF 200 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 200 (854)
+++|++|+|++|+|+++.+..|..+++|++|+|++|+++.++..
T Consensus 84 --------------------------------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---- 127 (272)
T 3rfs_A 84 --------------------------------LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDG---- 127 (272)
T ss_dssp --------------------------------CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT----
T ss_pred --------------------------------CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHH----
Confidence 44444444444444444444444444444444444444433221
Q ss_pred hhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCc
Q 043388 201 VTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGEL 280 (854)
Q Consensus 201 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 280 (854)
.|..+++|++|+|++|++++..|..+..++ .|+.|++++|++++..+..|.++++|++|++++|+++++.+..|..+
T Consensus 128 --~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 204 (272)
T 3rfs_A 128 --VFDKLTNLTYLNLAHNQLQSLPKGVFDKLT-NLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 204 (272)
T ss_dssp --TTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred --HhccCCCCCEEECCCCccCccCHHHhccCc-cCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCC
Confidence 233444444555555544433333333333 45555555555555555556666677777777777776666666777
Q ss_pred ccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCC
Q 043388 281 QHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQN 330 (854)
Q Consensus 281 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 330 (854)
++|+.|++++|.+.+. +++|+.|+++.|.++|.+|..++.++.
T Consensus 205 ~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 205 TSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred cCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 7777777777766533 335666777777777666666665543
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.2e-24 Score=224.85 Aligned_cols=203 Identities=22% Similarity=0.315 Sum_probs=178.3
Q ss_pred CceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCC
Q 043388 128 LWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNC 207 (854)
Q Consensus 128 L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l 207 (854)
.+.+++++|++ +.+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|+.++.. .|.++
T Consensus 18 ~~~l~~~~~~l-----~~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~------~~~~l 84 (270)
T 2o6q_A 18 KNSVDCSSKKL-----TAIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG------IFKEL 84 (270)
T ss_dssp TTEEECTTSCC-----SSCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT------TTSSC
T ss_pred CCEEEccCCCC-----CccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh------hhcCC
Confidence 34455555555 44566553 6899999999999999999999999999999999999877654 57889
Q ss_pred CCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceee
Q 043388 208 SSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLY 287 (854)
Q Consensus 208 ~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 287 (854)
++|++|+|++|++++..+..+..+. .|+.|++++|.+++..+..|.++++|++|+|++|+|+++.+..|..+++|++|+
T Consensus 85 ~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 85 KNLETLWVTDNKLQALPIGVFDQLV-NLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCS-SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCcCCHhHccccc-CCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 9999999999999965566667775 899999999999988888999999999999999999998888899999999999
Q ss_pred CccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCc
Q 043388 288 MFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGA 344 (854)
Q Consensus 288 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 344 (854)
|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++...
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 999999988888899999999999999999987777899999999999999998743
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2e-24 Score=226.99 Aligned_cols=203 Identities=23% Similarity=0.173 Sum_probs=104.8
Q ss_pred hhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCc
Q 043388 12 IGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLE 91 (854)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 91 (854)
++++++++++++++|.++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|.|+++.+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455566666666666666 4444443 4555666666666555555555556666666666655543221 4555555
Q ss_pred eeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCC
Q 043388 92 FIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVS 171 (854)
Q Consensus 92 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~ 171 (854)
+|+|++|+|+ .+| ..+.++++|++|+|++|+|+++++
T Consensus 81 ~L~Ls~N~l~-~l~------------------------------------------~~~~~l~~L~~L~l~~N~l~~l~~ 117 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLP------------------------------------------LLGQTLPALTVLDVSFNRLTSLPL 117 (290)
T ss_dssp EEECCSSCCS-SCC------------------------------------------CCTTTCTTCCEEECCSSCCCCCCS
T ss_pred EEECCCCcCC-cCc------------------------------------------hhhccCCCCCEEECCCCcCcccCH
Confidence 5555555554 444 334444444444444444444444
Q ss_pred cCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCc
Q 043388 172 IDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPS 251 (854)
Q Consensus 172 ~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~ 251 (854)
..|..+++|++|+|++|+|+.++.. .|..+++|+.|+|++|++++..+..+..+. .|+.|+|++|+|+ .+|.
T Consensus 118 ~~~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~-~L~~L~L~~N~l~-~ip~ 189 (290)
T 1p9a_G 118 GALRGLGELQELYLKGNELKTLPPG------LLTPTPKLEKLSLANNNLTELPAGLLNGLE-NLDTLLLQENSLY-TIPK 189 (290)
T ss_dssp STTTTCTTCCEEECTTSCCCCCCTT------TTTTCTTCCEEECTTSCCSCCCTTTTTTCT-TCCEEECCSSCCC-CCCT
T ss_pred HHHcCCCCCCEEECCCCCCCccChh------hcccccCCCEEECCCCcCCccCHHHhcCcC-CCCEEECCCCcCC-ccCh
Confidence 4444444444444444444433332 234444555555555555422222223332 4555555555555 4455
Q ss_pred cccccccCCeeeccccccc
Q 043388 252 GIRNLVNLIALTIEVNQLH 270 (854)
Q Consensus 252 ~~~~l~~L~~L~L~~N~l~ 270 (854)
.+..+.+|+.|+|++|.+.
T Consensus 190 ~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 190 GFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTCCCSEEECCSCCBC
T ss_pred hhcccccCCeEEeCCCCcc
Confidence 5555566677777777664
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=2.7e-26 Score=250.24 Aligned_cols=260 Identities=18% Similarity=0.200 Sum_probs=141.1
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCC----ccccCcC-CCCeeecccccccccCCcCccCC-----CCCcEEec
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLP----DFVGNLS-ALGMLLIRWNSLGGQIPTTLGLL-----RNLVYLNV 71 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~L 71 (854)
|+++|.+|+.+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|++|+|
T Consensus 8 n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L 87 (362)
T 3goz_A 8 HPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNL 87 (362)
T ss_dssp CTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEEC
T ss_pred ccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEEC
Confidence 55666666666655566666666666664444 4555555 56666666666665555555554 66666666
Q ss_pred ccccCcccChhhhcC----C-CCCceeeecccccccccCcccc----cCC-CCCcEEEcccCCCCCCceeeccCccCCCC
Q 043388 72 AENQFSGMFPRWICN----I-SSLEFIYLTVNRFSGSLPFDIL----VNL-PNLKELYLTFCSLKNLWWLNLEQNNLGMG 141 (854)
Q Consensus 72 s~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~~~~~~----~~l-~~L~~L~l~~n~l~~L~~L~L~~N~l~~~ 141 (854)
++|++++..+..+.. + ++|++|+|++|+|+ ..+...| ..+ ++|++|++++|++. ..
T Consensus 88 s~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-------------~~ 153 (362)
T 3goz_A 88 SGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS-SKSSSEFKQAFSNLPASITSLNLRGNDLG-------------IK 153 (362)
T ss_dssp CSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG-GSCHHHHHHHHTTSCTTCCEEECTTSCGG-------------GS
T ss_pred cCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC-cHHHHHHHHHHHhCCCceeEEEccCCcCC-------------HH
Confidence 666666555553332 2 56666666666665 3333221 111 23333333333222 11
Q ss_pred CCCCCCccccCCC-CCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCC-CCCcEEEcccCc
Q 043388 142 TASSIPDSLSNAS-NLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNC-SSLKALSLCDNQ 219 (854)
Q Consensus 142 ~~~~~p~~~~~l~-~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l-~~L~~L~L~~N~ 219 (854)
....++..+..++ +|++|+|++|+|++..+..+. ..+..+ ++|++|+|++|.
T Consensus 154 ~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~--------------------------~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 154 SSDELIQILAAIPANVNSLNLRGNNLASKNCAELA--------------------------KFLASIPASVTSLDLSANL 207 (362)
T ss_dssp CHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH--------------------------HHHHTSCTTCCEEECTTSC
T ss_pred HHHHHHHHHhcCCccccEeeecCCCCchhhHHHHH--------------------------HHHHhCCCCCCEEECCCCC
Confidence 1122333333333 555555555555444333222 233333 255555555555
Q ss_pred Cccc----CChhhhhhcccccEEEccCCcccccCC----ccccccccCCeeeccccccccCCC-------CCccCcccCc
Q 043388 220 FGGE----LPHSIANLSSTMIQFRIGGNQISGTIP----SGIRNLVNLIALTIEVNQLHGIIP-------DGVGELQHLQ 284 (854)
Q Consensus 220 l~~~----~p~~~~~l~~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~-------~~~~~l~~L~ 284 (854)
+++. ++..+....+.|+.|+|++|.|++..+ ..+..+++|+.|+|++|++.++.+ ..+..+++|+
T Consensus 208 i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~ 287 (362)
T 3goz_A 208 LGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKII 287 (362)
T ss_dssp GGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEE
T ss_pred CChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceE
Confidence 5532 333444433356666666666654333 335667889999999998655433 3677888899
Q ss_pred eeeCccccccccCCccc
Q 043388 285 QLYMFRNFLQGSIPPSL 301 (854)
Q Consensus 285 ~L~L~~N~l~~~~~~~~ 301 (854)
.|++++|++....+..+
T Consensus 288 ~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 288 LVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp EECTTSCBCCGGGCHHH
T ss_pred EEecCCCcCCCcchHHH
Confidence 99999999886655444
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.1e-24 Score=227.38 Aligned_cols=229 Identities=22% Similarity=0.285 Sum_probs=165.8
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
.+..+++..+.+... ..+..+++|+.|++++|.++ .+ ..+..+++|++|+|++|.+++. ..+.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 445566666666533 23566777788888888776 22 3477778888888888887753 367777888888888
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+|+ .++...|.++++|++|++++|+++.+ .|..|.++++|++|+|++|+|+++++..|..
T Consensus 94 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 155 (272)
T 3rfs_A 94 GNQLQ-SLPNGVFDKLTNLKELVLVENQLQSL-----------------PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDK 155 (272)
T ss_dssp TSCCC-CCCTTTTTTCTTCCEEECTTSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCccC-ccChhHhcCCcCCCEEECCCCcCCcc-----------------CHHHhccCCCCCEEECCCCccCccCHHHhcc
Confidence 88877 67767777777777777777766533 2445677888888888888888777777788
Q ss_pred cCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccccc
Q 043388 177 LKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNL 256 (854)
Q Consensus 177 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l 256 (854)
+++|++|+|++|+++.++.. .|..+++|++|++++|++++..|..+..++ .|+.|++++|.+.+. +
T Consensus 156 l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~~~~~-------~ 221 (272)
T 3rfs_A 156 LTNLTELDLSYNQLQSLPEG------VFDKLTQLKDLRLYQNQLKSVPDGVFDRLT-SLQYIWLHDNPWDCT-------C 221 (272)
T ss_dssp CTTCCEEECCSSCCCCCCTT------TTTTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSSCBCCC-------T
T ss_pred CccCCEEECCCCCcCccCHH------HhcCCccCCEEECCCCcCCccCHHHHhCCc-CCCEEEccCCCcccc-------C
Confidence 88888888888887765543 466778888888888888866666666665 688888888877643 4
Q ss_pred ccCCeeeccccccccCCCCCccCcccC
Q 043388 257 VNLIALTIEVNQLHGIIPDGVGELQHL 283 (854)
Q Consensus 257 ~~L~~L~L~~N~l~~~~~~~~~~l~~L 283 (854)
++|+.|++..|+++|.+|.+++.+...
T Consensus 222 ~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 222 PGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp TTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred cHHHHHHHHHHhCCCcccCcccccCCC
Confidence 468888888888888888888776543
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=3.9e-24 Score=224.81 Aligned_cols=204 Identities=20% Similarity=0.187 Sum_probs=163.6
Q ss_pred ccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCC
Q 043388 36 VGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNL 115 (854)
Q Consensus 36 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 115 (854)
++++++++.+++++|+++ .+|..+. ++|++|+|++|.|+++.|..|.++++|++|+|++|+|+ .++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~---------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQ---------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEE----------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccC-ccc----------
Confidence 566677777777777777 4555443 56777777777777666677777777777777777665 222
Q ss_pred cEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCC
Q 043388 116 KELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTA 195 (854)
Q Consensus 116 ~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~ 195 (854)
. ...+++|++|+|++|+|+. .|..+..+++|++|+|++|+|+.++.
T Consensus 72 --------------------------------~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~ 117 (290)
T 1p9a_G 72 --------------------------------V-DGTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPL 117 (290)
T ss_dssp --------------------------------C-CSCCTTCCEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCS
T ss_pred --------------------------------C-CCCCCcCCEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCH
Confidence 1 1457889999999999985 46688999999999999999998775
Q ss_pred CChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCC
Q 043388 196 NDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPD 275 (854)
Q Consensus 196 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 275 (854)
. .|.++++|++|+|++|++++..+..|..++ +|+.|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|.
T Consensus 118 ~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~ 189 (290)
T 1p9a_G 118 G------ALRGLGELQELYLKGNELKTLPPGLLTPTP-KLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK 189 (290)
T ss_dssp S------TTTTCTTCCEEECTTSCCCCCCTTTTTTCT-TCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCT
T ss_pred H------HHcCCCCCCEEECCCCCCCccChhhccccc-CCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccCh
Confidence 4 578999999999999999966566666665 8999999999999877788899999999999999999 4666
Q ss_pred CccCcccCceeeCccccccc
Q 043388 276 GVGELQHLQQLYMFRNFLQG 295 (854)
Q Consensus 276 ~~~~l~~L~~L~L~~N~l~~ 295 (854)
.+..+++|+.|+|++|.+..
T Consensus 190 ~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 190 GFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TTTTTCCCSEEECCSCCBCC
T ss_pred hhcccccCCeEEeCCCCccC
Confidence 77788899999999999873
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=1.1e-25 Score=245.58 Aligned_cols=262 Identities=17% Similarity=0.236 Sum_probs=172.7
Q ss_pred EecccccccccCCccccCcCCCCeeecccccccccCC----cCccCCC-CCcEEecccccCcccChhhhcCC-----CCC
Q 043388 21 LAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIP----TTLGLLR-NLVYLNVAENQFSGMFPRWICNI-----SSL 90 (854)
Q Consensus 21 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 90 (854)
++|++|.+++.+|..+...++|++|+|++|.|++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 5666666666666666666666666666666665444 5556666 66666666666666656555554 666
Q ss_pred ceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCC-CCCCEEecCCCcCccc
Q 043388 91 EFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNA-SNLERLDLSGNQFKGK 169 (854)
Q Consensus 91 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l-~~L~~L~Ls~N~i~~~ 169 (854)
++|+|++|+|+ ..+... +...+..+ ++|++|+|++|+|+..
T Consensus 83 ~~L~Ls~n~l~-~~~~~~-------------------------------------l~~~l~~~~~~L~~L~Ls~N~l~~~ 124 (362)
T 3goz_A 83 TSLNLSGNFLS-YKSSDE-------------------------------------LVKTLAAIPFTITVLDLGWNDFSSK 124 (362)
T ss_dssp CEEECCSSCGG-GSCHHH-------------------------------------HHHHHHTSCTTCCEEECCSSCGGGS
T ss_pred cEEECcCCcCC-hHHHHH-------------------------------------HHHHHHhCCCCccEEECcCCcCCcH
Confidence 66666666665 222111 11234444 6777777777777766
Q ss_pred CCcCccc-----cCCCCeEecccccccCCCCCChhhhhhccCCC-CCcEEEcccCcCcccCChhhhhh----cccccEEE
Q 043388 170 VSIDFSS-----LKNLWWLNLEQNNLGMGTANDLDFVTLLTNCS-SLKALSLCDNQFGGELPHSIANL----SSTMIQFR 239 (854)
Q Consensus 170 ~~~~f~~-----l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l----~~~L~~L~ 239 (854)
.+..|.. .++|++|+|++|.|+..... .+...+..++ +|++|+|++|++++..+..+... ++.|+.|+
T Consensus 125 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~ 202 (362)
T 3goz_A 125 SSSEFKQAFSNLPASITSLNLRGNDLGIKSSD--ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLD 202 (362)
T ss_dssp CHHHHHHHHTTSCTTCCEEECTTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred HHHHHHHHHHhCCCceeEEEccCCcCCHHHHH--HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEE
Confidence 5544433 25777777777777643322 3344555665 89999999999987776655543 23799999
Q ss_pred ccCCccccc----CCccccc-cccCCeeeccccccccCCC----CCccCcccCceeeCcccccccc-------CCccccC
Q 043388 240 IGGNQISGT----IPSGIRN-LVNLIALTIEVNQLHGIIP----DGVGELQHLQQLYMFRNFLQGS-------IPPSLGN 303 (854)
Q Consensus 240 l~~N~l~~~----~~~~~~~-l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~-------~~~~~~~ 303 (854)
|++|.|++. ++..+.. .++|++|+|++|+|++..+ ..+..+++|+.|+|++|.+.+. ++..+..
T Consensus 203 Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~ 282 (362)
T 3goz_A 203 LSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPN 282 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTT
T ss_pred CCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhcc
Confidence 999999863 4445555 3589999999999987654 3456778899999999985433 3346777
Q ss_pred ccccchhccccceecccCC
Q 043388 304 LTKLADLALSFNNLQGNIP 322 (854)
Q Consensus 304 l~~L~~L~L~~N~l~~~~~ 322 (854)
+++|+.||+++|.+....+
T Consensus 283 l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 283 IQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp CCEEEEECTTSCBCCGGGC
T ss_pred CCceEEEecCCCcCCCcch
Confidence 8888888888888875543
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.9e-24 Score=219.72 Aligned_cols=206 Identities=17% Similarity=0.172 Sum_probs=136.7
Q ss_pred cccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEeccccc-CcccChhhhcCCCCCceeeecc-ccccccc
Q 043388 27 YLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQ-FSGMFPRWICNISSLEFIYLTV-NRFSGSL 104 (854)
Q Consensus 27 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~ 104 (854)
.++ .+|. +. .+|++|++++|+|+++.+..|+.+++|++|+|++|+ ++++.+.+|.++++|++|+|++ |+|+ .+
T Consensus 22 ~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i 96 (239)
T 2xwt_C 22 DIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YI 96 (239)
T ss_dssp SCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EE
T ss_pred Ccc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-Ec
Confidence 355 5666 44 378888888888887666678888888888888886 7777777788888888888887 7887 67
Q ss_pred CcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCC---EEecCCC-cCcccCCcCccccCCC
Q 043388 105 PFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLE---RLDLSGN-QFKGKVSIDFSSLKNL 180 (854)
Q Consensus 105 ~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~---~L~Ls~N-~i~~~~~~~f~~l~~L 180 (854)
|...|.++++|++|++++|+++. +|+ |..+++|+ +|++++| +++++++..|.++++|
T Consensus 97 ~~~~f~~l~~L~~L~l~~n~l~~------------------lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L 157 (239)
T 2xwt_C 97 DPDALKELPLLKFLGIFNTGLKM------------------FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE 157 (239)
T ss_dssp CTTSEECCTTCCEEEEEEECCCS------------------CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS
T ss_pred CHHHhCCCCCCCEEeCCCCCCcc------------------ccc-cccccccccccEEECCCCcchhhcCcccccchhcc
Confidence 77777777777777777666543 344 55666666 7777777 7776666666666666
Q ss_pred C-eEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCc-ccccCCcccccc-c
Q 043388 181 W-WLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQ-ISGTIPSGIRNL-V 257 (854)
Q Consensus 181 ~-~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~-l~~~~~~~~~~l-~ 257 (854)
+ +|++++|+++.+ |...+.. +.|+.|++++|+ ++++.+..|.++ +
T Consensus 158 ~~~L~l~~n~l~~i-------------------------------~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~ 205 (239)
T 2xwt_C 158 TLTLKLYNNGFTSV-------------------------------QGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYS 205 (239)
T ss_dssp EEEEECCSCCCCEE-------------------------------CTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSB
T ss_pred eeEEEcCCCCCccc-------------------------------CHhhcCC-CCCCEEEcCCCCCcccCCHHHhhcccc
Confidence 6 666665555433 3222222 245555666663 555555666666 7
Q ss_pred cCCeeeccccccccCCCCCccCcccCceeeCccc
Q 043388 258 NLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRN 291 (854)
Q Consensus 258 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 291 (854)
+|+.|++++|+|+++.+. .+++|+.|+++++
T Consensus 206 ~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 206 GPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 777777777777754443 4556666666654
No 335
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=1.4e-24 Score=235.32 Aligned_cols=240 Identities=20% Similarity=0.237 Sum_probs=118.1
Q ss_pred eeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcE-EEccc
Q 043388 44 MLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKE-LYLTF 122 (854)
Q Consensus 44 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~-L~l~~ 122 (854)
+++.++++++ .+|..+ .+++++|+|++|+|+++.+++|.++++|++|+|++|++.+.+|.++|.++++|++ +.+..
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 3444555554 344433 2455555555555554444555555555555555555543455555555555443 22233
Q ss_pred CCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEeccc-ccccCCCCCChhhh
Q 043388 123 CSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQ-NNLGMGTANDLDFV 201 (854)
Q Consensus 123 n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~-N~l~~~~~~~~~~~ 201 (854)
|+++.+ .|+.|.++++|++|++++|+|+.+++..+....++..|++.+ |++..++..
T Consensus 90 N~l~~l-----------------~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~----- 147 (350)
T 4ay9_X 90 NNLLYI-----------------NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN----- 147 (350)
T ss_dssp TTCCEE-----------------CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT-----
T ss_pred Cccccc-----------------CchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc-----
Confidence 333322 134455566666666666666655555555555555555533 344433332
Q ss_pred hhccCC-CCCcEEEcccCcCcccCChhhhhhcccccEEEccC-CcccccCCccccccccCCeeeccccccccCCCCCccC
Q 043388 202 TLLTNC-SSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGG-NQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGE 279 (854)
Q Consensus 202 ~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 279 (854)
.|..+ ..++.|+|++|+|+ .+|...+... .++.|++.+ |.++.+.++.|.++++|++|+|++|+|+.+.+..|.+
T Consensus 148 -~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~-~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~ 224 (350)
T 4ay9_X 148 -SFVGLSFESVILWLNKNGIQ-EIHNSAFNGT-QLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 224 (350)
T ss_dssp -SSTTSBSSCEEEECCSSCCC-EECTTSSTTE-EEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT
T ss_pred -chhhcchhhhhhcccccccc-CCChhhcccc-chhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc
Confidence 12222 23555555555555 3333333333 455555543 4444344445566666666666666666554444444
Q ss_pred cccCceeeCccccccccCCccccCccccchhccccc
Q 043388 280 LQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFN 315 (854)
Q Consensus 280 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 315 (854)
+++|+.+++ +.++ .+| .+.++++|+.++++++
T Consensus 225 L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 225 LKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred chHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 444433332 1222 333 2455555555555544
No 336
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.6e-25 Score=255.18 Aligned_cols=189 Identities=15% Similarity=0.149 Sum_probs=140.3
Q ss_pred hccccCccCCCcceEEEEeEECCCceEEEEEEeeccccc--------chHHHHHHHHHHHhccCCCeeeEEEEeeccCCC
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKG--------AFRSFVAECEALRNIRHRNLIKIITICSSIDSK 620 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 620 (854)
.+...++||+|+||.||+|... +..+|+|+....... ..+++.+|++++++++||||+++..++...+
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-- 412 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD-- 412 (540)
T ss_dssp -----------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT--
T ss_pred cCCCCCEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC--
Confidence 3345679999999999999554 667888886432211 1345799999999999999994444444333
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ 700 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~ 700 (854)
..++||||+++++|.+++.. +..++.|++.||+|||++ +|+||||||+|||++. .++++
T Consensus 413 ---~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~-~~kL~ 471 (540)
T 3en9_A 413 ---NKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK-DLYII 471 (540)
T ss_dssp ---TTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS-SEEEC
T ss_pred ---ccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC-eEEEE
Confidence 45999999999999999875 357899999999999999 9999999999999999 66666
Q ss_pred ccccccccccCCCCCC----cccccCCcccccCccccCC--CCCCccchhHHHHHHHHHHHhCCCCCC
Q 043388 701 NFSLSHQLDSASKTPS----SSIGIKGTVGYVAPEYGMG--SEASMTGDVYSFGILLLEMFTGRRPTD 762 (854)
Q Consensus 701 Dfg~~~~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~sDv~slGvvl~elltg~~pf~ 762 (854)
|||+++.......... ......||+.|||||++.. ..|+.++|+||..+-..+-+.++.+|.
T Consensus 472 DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 472 DFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9999998755322110 0123569999999999877 557888999999999999888877764
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1e-23 Score=215.55 Aligned_cols=185 Identities=16% Similarity=0.178 Sum_probs=156.1
Q ss_pred cCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeeccccc-ccccCCcCccCCCCCcEEeccc-ccCcccChhhh
Q 043388 7 QIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNS-LGGQIPTTLGLLRNLVYLNVAE-NQFSGMFPRWI 84 (854)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~ 84 (854)
.+|. +.. +|++|+|++|++++..+..|+.+++|++|++++|+ ++.+.+..|..+++|++|+|++ |+|+++.+.+|
T Consensus 25 ~ip~-~~~--~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LPP--STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CCT--TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CCC--cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5676 544 89999999999997777799999999999999997 9977778999999999999999 99998888999
Q ss_pred cCCCCCceeeecccccccccCcccccCCCCCc---EEEcccC-CCCCCceeeccCccCCCCCCCCCCccccCCCCCC-EE
Q 043388 85 CNISSLEFIYLTVNRFSGSLPFDILVNLPNLK---ELYLTFC-SLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLE-RL 159 (854)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~---~L~l~~n-~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~-~L 159 (854)
.++++|++|+|++|+++ .+|. |..+++|+ +|++++| +++.+ .+..|.++++|+ +|
T Consensus 102 ~~l~~L~~L~l~~n~l~-~lp~--~~~l~~L~~L~~L~l~~N~~l~~i-----------------~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLK-MFPD--LTKVYSTDIFFILEITDNPYMTSI-----------------PVNAFQGLCNETLTL 161 (239)
T ss_dssp ECCTTCCEEEEEEECCC-SCCC--CTTCCBCCSEEEEEEESCTTCCEE-----------------CTTTTTTTBSSEEEE
T ss_pred CCCCCCCEEeCCCCCCc-cccc--cccccccccccEEECCCCcchhhc-----------------CcccccchhcceeEE
Confidence 99999999999999999 6885 77777777 6666666 55433 235689999999 99
Q ss_pred ecCCCcCcccCCcCccccCCCCeEeccccc-ccCCCCCChhhhhhccCC-CCCcEEEcccCcCc
Q 043388 160 DLSGNQFKGKVSIDFSSLKNLWWLNLEQNN-LGMGTANDLDFVTLLTNC-SSLKALSLCDNQFG 221 (854)
Q Consensus 160 ~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~~l-~~L~~L~L~~N~l~ 221 (854)
+|++|+|+.+++..|.. ++|++|+|++|+ ++.++.. .|.++ ++|+.|++++|+++
T Consensus 162 ~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~------~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 162 KLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKD------AFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp ECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTT------TTTTCSBCCSEEECTTCCCC
T ss_pred EcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHH------HhhccccCCcEEECCCCccc
Confidence 99999999888888877 889999999994 8766543 46667 77888888887777
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=5.1e-23 Score=211.96 Aligned_cols=181 Identities=24% Similarity=0.289 Sum_probs=161.2
Q ss_pred CCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeee
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYL 95 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 95 (854)
.+.++++++++.++ .+|..+. ++++.|+|++|++++..+..|..+++|++|+|++|+|+++.|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46789999999999 6887776 68999999999999888889999999999999999999999999999999999999
Q ss_pred cccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcc
Q 043388 96 TVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFS 175 (854)
Q Consensus 96 ~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~ 175 (854)
++|+|+ .+|...|..+++|++|++++|+++.+ .+..|.++++|++|+|++|+|+++++..|.
T Consensus 91 ~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 152 (251)
T 3m19_A 91 ANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSL-----------------PSGVFDRLTKLKELRLNTNQLQSIPAGAFD 152 (251)
T ss_dssp TTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCccc-ccChhHhcccCCCCEEEcCCCcCCCc-----------------ChhHhccCCcccEEECcCCcCCccCHHHcC
Confidence 999998 88888899999998888888877644 245578899999999999999999888999
Q ss_pred ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCccc
Q 043388 176 SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGE 223 (854)
Q Consensus 176 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 223 (854)
.+++|++|+|++|+|+.++.. .|..+++|++|+|++|.+...
T Consensus 153 ~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 153 KLTNLQTLSLSTNQLQSVPHG------AFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCTTCCEEECCSSCCSCCCTT------TTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCCCEEECCCCcCCccCHH------HHhCCCCCCEEEeeCCceeCC
Confidence 999999999999999877654 577889999999999999854
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.2e-25 Score=245.69 Aligned_cols=179 Identities=17% Similarity=0.232 Sum_probs=103.5
Q ss_pred CCccccCCCCCCEEecCCCcCcccCCcCccc----c---------CCCCeEecccccccCCCCCChhhhhhccCCCCCcE
Q 043388 146 IPDSLSNASNLERLDLSGNQFKGKVSIDFSS----L---------KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKA 212 (854)
Q Consensus 146 ~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~----l---------~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~ 212 (854)
+|..+.++++|++|+|++|+|+...+..+.. + ++|++|+|++|+++..... .+...+..+++|++
T Consensus 114 l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 114 LIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMK--EWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHH--HHHHHHHHCTTCCE
T ss_pred HHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHH--HHHHHHHhCCCcCE
Confidence 4556666677777777777765443333332 2 5555555555555321110 11123444455555
Q ss_pred EEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccc----cCCCCCccCcccCceeeC
Q 043388 213 LSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLH----GIIPDGVGELQHLQQLYM 288 (854)
Q Consensus 213 L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~L 288 (854)
|+|++|+++.. .+. ...|..+..+++|+.|+|++|+|+ ..+|..+..+++|++|+|
T Consensus 192 L~L~~n~l~~~---g~~-----------------~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L 251 (386)
T 2ca6_A 192 VKMVQNGIRPE---GIE-----------------HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGL 251 (386)
T ss_dssp EECCSSCCCHH---HHH-----------------HHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEEC
T ss_pred EECcCCCCCHh---HHH-----------------HHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEEC
Confidence 55555554410 000 022335666667777777777764 345556667777777777
Q ss_pred cccccccc----CCccc--cCccccchhccccceecc----cCCCCC-cCCCCCcccccCCCcccCccc
Q 043388 289 FRNFLQGS----IPPSL--GNLTKLADLALSFNNLQG----NIPSSL-GNCQNLKGFDASHNKLTGAIP 346 (854)
Q Consensus 289 ~~N~l~~~----~~~~~--~~l~~L~~L~L~~N~l~~----~~~~~~-~~l~~L~~L~ls~N~l~~~~p 346 (854)
++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+
T Consensus 252 ~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 252 NDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp TTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 77777654 44555 337777888888887775 366655 557888888888888875443
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=9.9e-24 Score=224.72 Aligned_cols=233 Identities=15% Similarity=0.111 Sum_probs=175.7
Q ss_pred CCCCEEecccccccccC-Cc--cccCcCCCCeeecccccccccCCcCc--cCCCCCcEEecccccCcccCh----hhhcC
Q 043388 16 LNLQTLAIDFNYLTGQL-PD--FVGNLSALGMLLIRWNSLGGQIPTTL--GLLRNLVYLNVAENQFSGMFP----RWICN 86 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~-~~--~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 86 (854)
..++.|.+.++.++... .. .+..+++|++|++++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 35678888887775321 11 12334679999999999998888888 889999999999999987554 45568
Q ss_pred CCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcC
Q 043388 87 ISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQF 166 (854)
Q Consensus 87 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i 166 (854)
+++|++|+|++|+|+ .++...|.++++|++|++++|++..... -..+..+.++++|++|+|++|+|
T Consensus 144 ~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-------------~~~~~~~~~l~~L~~L~Ls~N~l 209 (310)
T 4glp_A 144 KPGLKVLSIAQAHSP-AFSCEQVRAFPALTSLDLSDNPGLGERG-------------LMAALCPHKFPAIQNLALRNTGM 209 (310)
T ss_dssp CSCCCEEEEECCSSC-CCCTTSCCCCTTCCEEECCSCTTCHHHH-------------HHTTSCTTSSCCCCSCBCCSSCC
T ss_pred ccCCCEEEeeCCCcc-hhhHHHhccCCCCCEEECCCCCCccchh-------------hhHHHhhhcCCCCCEEECCCCCC
Confidence 999999999999997 7777788888888888888887642100 00122346788999999999999
Q ss_pred cccCCc---CccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCC
Q 043388 167 KGKVSI---DFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGN 243 (854)
Q Consensus 167 ~~~~~~---~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N 243 (854)
+.+.+. .+..+++|++|+|++|+|+...+..+ ..+..+++|++|+|++|+++ .+|..+. +.|+.|+|++|
T Consensus 210 ~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~---~~~~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N 282 (310)
T 4glp_A 210 ETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSA---PRCMWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSN 282 (310)
T ss_dssp CCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCC---SSCCCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSC
T ss_pred CchHHHHHHHHhcCCCCCEEECCCCCCCccchhhH---HhccCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCC
Confidence 754332 35778999999999999987632211 12333479999999999999 7787765 48999999999
Q ss_pred cccccCCccccccccCCeeecccccccc
Q 043388 244 QISGTIPSGIRNLVNLIALTIEVNQLHG 271 (854)
Q Consensus 244 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 271 (854)
+|++. |. +..+++|+.|+|++|+|+.
T Consensus 283 ~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 283 RLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 99965 43 7888999999999999974
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.89 E-value=4.7e-23 Score=223.33 Aligned_cols=242 Identities=17% Similarity=0.118 Sum_probs=198.5
Q ss_pred cEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCC
Q 043388 67 VYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSI 146 (854)
Q Consensus 67 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~ 146 (854)
++++.++|+++ .+|..+ .+++++|+|++|+|+ .+|.++|.++++|++|+|++|++.. .+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~-----------------~i 70 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLE-----------------VI 70 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCC-----------------EE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCC-----------------cc
Confidence 57899999999 567655 468999999999999 9999999999999999999888642 23
Q ss_pred C-ccccCCCCCCE-EecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEccc-CcCccc
Q 043388 147 P-DSLSNASNLER-LDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCD-NQFGGE 223 (854)
Q Consensus 147 p-~~~~~l~~L~~-L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~-N~l~~~ 223 (854)
| ..|.++++|.+ +.+++|+|+.+.+..|..+++|++|++++|+|..++.. .+....++..|++.+ |++...
T Consensus 71 ~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~------~~~~~~~l~~l~l~~~~~i~~l 144 (350)
T 4ay9_X 71 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV------HKIHSLQKVLLDIQDNINIHTI 144 (350)
T ss_dssp CTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCC------TTCCBSSCEEEEEESCTTCCEE
T ss_pred ChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCch------hhcccchhhhhhhccccccccc
Confidence 3 56889998875 67788999999999999999999999999999877654 355667788999866 677755
Q ss_pred CChhhhhhcccccEEEccCCcccccCCccccccccCCeeecc-ccccccCCCCCccCcccCceeeCccccccccCCcccc
Q 043388 224 LPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIE-VNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLG 302 (854)
Q Consensus 224 ~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 302 (854)
.+..|..+...++.|+|++|+|+.+.+..| ...+|++|+++ +|.++.+.+++|.++++|++|+|++|+|+...+..|.
T Consensus 145 ~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 145 ERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred cccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 556677777679999999999996555544 56789999997 5788888788999999999999999999977677788
Q ss_pred CccccchhccccceecccCCCCCcCCCCCcccccCCCc
Q 043388 303 NLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNK 340 (854)
Q Consensus 303 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~ 340 (854)
++++|+.+++. .++ .+| .+.++++|+.++++++.
T Consensus 224 ~L~~L~~l~~~--~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 224 NLKKLRARSTY--NLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TCCEEECTTCT--TCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred cchHhhhccCC--CcC-cCC-CchhCcChhhCcCCCCc
Confidence 88888887764 344 566 48889999999987653
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.2e-25 Score=245.64 Aligned_cols=204 Identities=18% Similarity=0.209 Sum_probs=138.3
Q ss_pred cccCCCCCCEEecCCCcCcc----cCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccC
Q 043388 149 SLSNASNLERLDLSGNQFKG----KVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGEL 224 (854)
Q Consensus 149 ~~~~l~~L~~L~Ls~N~i~~----~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 224 (854)
.|.++++|++|+|++|+|+. ..+..|..+++|++|+|++|.++..... .+...+..+ ..|.+.+.
T Consensus 89 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~l--------~~~~~~~~- 157 (386)
T 2ca6_A 89 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGA--KIARALQEL--------AVNKKAKN- 157 (386)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHH--HHHHHHHHH--------HHHHHHHT-
T ss_pred HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHH--HHHHHHHHH--------hhhhhccc-
Confidence 34677888888888888875 2444555666666666666655321111 111112222 00000000
Q ss_pred ChhhhhhcccccEEEccCCccc-ccCC---ccccccccCCeeecccccccc-----CCCCCccCcccCceeeCcccccc-
Q 043388 225 PHSIANLSSTMIQFRIGGNQIS-GTIP---SGIRNLVNLIALTIEVNQLHG-----IIPDGVGELQHLQQLYMFRNFLQ- 294 (854)
Q Consensus 225 p~~~~~l~~~L~~L~l~~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~- 294 (854)
.+.|+.|++++|+++ ...+ ..+..+++|++|+|++|+|+. ..|..+..+++|+.|+|++|.++
T Consensus 158 -------~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~ 230 (386)
T 2ca6_A 158 -------APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTH 230 (386)
T ss_dssp -------CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHH
T ss_pred -------CCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCc
Confidence 024555555555554 2222 356678889999999998872 45558899999999999999996
Q ss_pred ---ccCCccccCccccchhccccceeccc----CCCCC--cCCCCCcccccCCCcccC----ccchhhcc-hhhhHHHHH
Q 043388 295 ---GSIPPSLGNLTKLADLALSFNNLQGN----IPSSL--GNCQNLKGFDASHNKLTG----AIPQQVLS-ITTLSVYLA 360 (854)
Q Consensus 295 ---~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~--~~l~~L~~L~ls~N~l~~----~~p~~~~~-~~~l~~~l~ 360 (854)
+.+|..+..+++|+.|+|++|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+.. +..+.. ++
T Consensus 231 ~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~-L~ 309 (386)
T 2ca6_A 231 LGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLF-LE 309 (386)
T ss_dssp HHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCE-EE
T ss_pred HHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceE-EE
Confidence 57888999999999999999999865 46666 448999999999999996 48877743 566654 99
Q ss_pred hhcCCCCCCcC
Q 043388 361 LAHNLLNDSLP 371 (854)
Q Consensus 361 l~~n~l~~~~p 371 (854)
+++|.+++..+
T Consensus 310 l~~N~l~~~~~ 320 (386)
T 2ca6_A 310 LNGNRFSEEDD 320 (386)
T ss_dssp CTTSBSCTTSH
T ss_pred ccCCcCCcchh
Confidence 99999987654
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=222.98 Aligned_cols=228 Identities=17% Similarity=0.155 Sum_probs=130.4
Q ss_pred CCCeeecccccccccCCc---CccCCCCCcEEecccccCcccChhhh--cCCCCCceeeecccccccccC---cccccCC
Q 043388 41 ALGMLLIRWNSLGGQIPT---TLGLLRNLVYLNVAENQFSGMFPRWI--CNISSLEFIYLTVNRFSGSLP---FDILVNL 112 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~---~~~~~~l 112 (854)
.++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..+ ...+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467888888877531111 12345779999999999999999988 999999999999999985433 1222344
Q ss_pred CCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcc---cCC-cCccccCCCCeEecccc
Q 043388 113 PNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKG---KVS-IDFSSLKNLWWLNLEQN 188 (854)
Q Consensus 113 ~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~---~~~-~~f~~l~~L~~L~L~~N 188 (854)
++|++|++++|++.. ..|..|+++++|++|+|++|++.+ +.+ ..+..+++|++|+|++|
T Consensus 145 ~~L~~L~Ls~n~l~~-----------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N 207 (310)
T 4glp_A 145 PGLKVLSIAQAHSPA-----------------FSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNT 207 (310)
T ss_dssp SCCCEEEEECCSSCC-----------------CCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSS
T ss_pred cCCCEEEeeCCCcch-----------------hhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCC
Confidence 455555444444432 224455566666666666666543 211 22345555555555555
Q ss_pred cccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccccc---ccCCeeecc
Q 043388 189 NLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNL---VNLIALTIE 265 (854)
Q Consensus 189 ~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~L~ 265 (854)
+++.++.. ....+.++++| +.|+|++|+|++..|..+..+ ++|++|+|+
T Consensus 208 ~l~~l~~~---~~~l~~~l~~L-------------------------~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls 259 (310)
T 4glp_A 208 GMETPTGV---CAALAAAGVQP-------------------------HSLDLSHNSLRATVNPSAPRCMWSSALNSLNLS 259 (310)
T ss_dssp CCCCHHHH---HHHHHHHTCCC-------------------------SSEECTTSCCCCCCCSCCSSCCCCTTCCCEECC
T ss_pred CCCchHHH---HHHHHhcCCCC-------------------------CEEECCCCCCCccchhhHHhccCcCcCCEEECC
Confidence 55322110 00012344444 445555555544444444444 466666666
Q ss_pred ccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceec
Q 043388 266 VNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQ 318 (854)
Q Consensus 266 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 318 (854)
+|+|+. +|..+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 260 ~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 260 FAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp SSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 666663 344332 5666666666666643 22 455566666666666655
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=4.5e-23 Score=219.02 Aligned_cols=210 Identities=24% Similarity=0.319 Sum_probs=139.3
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
+..+.+..+.+++.+ .+..+++|++|++++|.++. +| .+..+++|++|+|++|+++++.+ +.++++|++|+|++
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccC
Confidence 444556666666433 34567788888888888873 44 57888888888888888886544 88888888888888
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+++ .++ .|..+++|++|++++|+++.+ | .+..+++|++|+|++|+++++.+ |..+
T Consensus 95 n~l~-~~~--~~~~l~~L~~L~l~~n~l~~~------------------~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l 150 (308)
T 1h6u_A 95 NPLK-NVS--AIAGLQSIKTLDLTSTQITDV------------------T-PLAGLSNLQVLYLDLNQITNISP--LAGL 150 (308)
T ss_dssp CCCS-CCG--GGTTCTTCCEEECTTSCCCCC------------------G-GGTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred CcCC-Cch--hhcCCCCCCEEECCCCCCCCc------------------h-hhcCCCCCCEEECCCCccCcCcc--ccCC
Confidence 8887 554 366666666666666655432 2 26777888888888888876654 7777
Q ss_pred CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccc
Q 043388 178 KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLV 257 (854)
Q Consensus 178 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~ 257 (854)
++|++|+|++|+++.++ .+..+++|+.|++++|++++. +. +..++ .|+.|++++|++++.. .+..++
T Consensus 151 ~~L~~L~l~~n~l~~~~--------~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~-~L~~L~L~~N~l~~~~--~l~~l~ 217 (308)
T 1h6u_A 151 TNLQYLSIGNAQVSDLT--------PLANLSKLTTLKADDNKISDI-SP-LASLP-NLIEVHLKNNQISDVS--PLANTS 217 (308)
T ss_dssp TTCCEEECCSSCCCCCG--------GGTTCTTCCEEECCSSCCCCC-GG-GGGCT-TCCEEECTTSCCCBCG--GGTTCT
T ss_pred CCccEEEccCCcCCCCh--------hhcCCCCCCEEECCCCccCcC-hh-hcCCC-CCCEEEccCCccCccc--cccCCC
Confidence 77778888777776432 156677777777777777632 22 44443 4555555555555433 255555
Q ss_pred cCCeeeccccccc
Q 043388 258 NLIALTIEVNQLH 270 (854)
Q Consensus 258 ~L~~L~L~~N~l~ 270 (854)
+|+.|+|++|+++
T Consensus 218 ~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 218 NLFIVTLTNQTIT 230 (308)
T ss_dssp TCCEEEEEEEEEE
T ss_pred CCCEEEccCCeee
Confidence 5555555555555
No 345
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=7e-24 Score=229.08 Aligned_cols=252 Identities=20% Similarity=0.251 Sum_probs=132.6
Q ss_pred CCEEecccccccccCCccccCc--CCCCeeecccccccccCCcCccCCCCCcEEecccccCccc-ChhhhcCCCCCceee
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNL--SALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGM-FPRWICNISSLEFIY 94 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ 94 (854)
++.|++++|.+. +..+..+ .+++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 445555555444 2334444 4555555555555533333 33445555555555555433 444455555555555
Q ss_pred ecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCC-cCccc-CCc
Q 043388 95 LTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGN-QFKGK-VSI 172 (854)
Q Consensus 95 L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N-~i~~~-~~~ 172 (854)
|++|++++. .|..+.++++|++|+|++| .+++. .+.
T Consensus 125 L~~~~l~~~------------------------------------------~~~~l~~~~~L~~L~L~~~~~l~~~~l~~ 162 (336)
T 2ast_B 125 LEGLRLSDP------------------------------------------IVNTLAKNSNLVRLNLSGCSGFSEFALQT 162 (336)
T ss_dssp CTTCBCCHH------------------------------------------HHHHHTTCTTCSEEECTTCBSCCHHHHHH
T ss_pred CcCcccCHH------------------------------------------HHHHHhcCCCCCEEECCCCCCCCHHHHHH
Confidence 555544422 2334444555555555555 34431 233
Q ss_pred CccccCCCCeEecccc-cccCCCCCChhhhhhccCCC-CCcEEEcccC--cCc-ccCChhhhhhcccccEEEccCCc-cc
Q 043388 173 DFSSLKNLWWLNLEQN-NLGMGTANDLDFVTLLTNCS-SLKALSLCDN--QFG-GELPHSIANLSSTMIQFRIGGNQ-IS 246 (854)
Q Consensus 173 ~f~~l~~L~~L~L~~N-~l~~~~~~~~~~~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~~L~~L~l~~N~-l~ 246 (854)
.+..+++|++|++++| .++. ...+..+..++ +|++|++++| .++ +.+|..+..++ +|+.|++++|. ++
T Consensus 163 ~~~~~~~L~~L~l~~~~~l~~-----~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~-~L~~L~l~~~~~l~ 236 (336)
T 2ast_B 163 LLSSCSRLDELNLSWCFDFTE-----KHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP-NLVHLDLSDSVMLK 236 (336)
T ss_dssp HHHHCTTCCEEECCCCTTCCH-----HHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT-TCSEEECTTCTTCC
T ss_pred HHhcCCCCCEEcCCCCCCcCh-----HHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCC-CCCEEeCCCCCcCC
Confidence 3445555555555555 4431 11223344555 6666666666 333 23444444443 56666666666 55
Q ss_pred ccCCccccccccCCeeeccccccccCCCC---CccCcccCceeeCccccccccCCccccCcc-ccchhccccceecccCC
Q 043388 247 GTIPSGIRNLVNLIALTIEVNQLHGIIPD---GVGELQHLQQLYMFRNFLQGSIPPSLGNLT-KLADLALSFNNLQGNIP 322 (854)
Q Consensus 247 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~ 322 (854)
+..+..+..+++|++|++++|. ++.+. .+..+++|+.|++++| ++ ...+..+. .|..|++++|++++..|
T Consensus 237 ~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 237 NDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp GGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred HHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccC
Confidence 5555666777777777777774 22233 4667777777777777 22 22344443 47777777777777777
Q ss_pred CCCcC
Q 043388 323 SSLGN 327 (854)
Q Consensus 323 ~~~~~ 327 (854)
..++.
T Consensus 311 ~~~~~ 315 (336)
T 2ast_B 311 PTIGN 315 (336)
T ss_dssp SSCSS
T ss_pred Ccccc
Confidence 66654
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.1e-22 Score=213.77 Aligned_cols=216 Identities=23% Similarity=0.301 Sum_probs=165.9
Q ss_pred CCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEE
Q 043388 40 SALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELY 119 (854)
Q Consensus 40 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 119 (854)
..+..+.+..+.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|+++ .++. |..+++|++|+
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~ 91 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT-DLAP--LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCCSCCEEE
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCC-CChh--HccCCCCCEEE
Confidence 34455567777776432 35568889999999998885 44 5888889999999999888 6665 77788888877
Q ss_pred cccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChh
Q 043388 120 LTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLD 199 (854)
Q Consensus 120 l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~ 199 (854)
+++|+++.+ +.+.++++|++|+|++|+|+++.+ |..+++|++|+|++|.++.++.
T Consensus 92 L~~n~l~~~-------------------~~~~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~---- 146 (308)
T 1h6u_A 92 LSGNPLKNV-------------------SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISP---- 146 (308)
T ss_dssp CCSCCCSCC-------------------GGGTTCTTCCEEECTTSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG----
T ss_pred ccCCcCCCc-------------------hhhcCCCCCCEEECCCCCCCCchh--hcCCCCCCEEECCCCccCcCcc----
Confidence 777766533 257788889999999999887643 8888899999999998875432
Q ss_pred hhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccC
Q 043388 200 FVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGE 279 (854)
Q Consensus 200 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 279 (854)
+..+++|++|+|++|++++ ++. +..++ .|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..
T Consensus 147 ----l~~l~~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~ 215 (308)
T 1h6u_A 147 ----LAGLTNLQYLSIGNAQVSD-LTP-LANLS-KLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LAN 215 (308)
T ss_dssp ----GGGCTTCCEEECCSSCCCC-CGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTT
T ss_pred ----ccCCCCccEEEccCCcCCC-Chh-hcCCC-CCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccC
Confidence 6778889999999998884 443 66665 78899999999886544 8888889999999999887653 788
Q ss_pred cccCceeeCccccccccCCc
Q 043388 280 LQHLQQLYMFRNFLQGSIPP 299 (854)
Q Consensus 280 l~~L~~L~L~~N~l~~~~~~ 299 (854)
+++|+.|++++|++++ .|.
T Consensus 216 l~~L~~L~l~~N~i~~-~~~ 234 (308)
T 1h6u_A 216 TSNLFIVTLTNQTITN-QPV 234 (308)
T ss_dssp CTTCCEEEEEEEEEEC-CCE
T ss_pred CCCCCEEEccCCeeec-CCe
Confidence 8899999999998874 443
No 347
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=2.9e-22 Score=206.30 Aligned_cols=171 Identities=25% Similarity=0.306 Sum_probs=154.9
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccCh
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFP 81 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 81 (854)
|+++ .+|..+. ++|++|+|++|.+++..+..|+.+++|++|+|++|+|++..+..|..+++|++|+|++|+|+++.+
T Consensus 24 ~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 100 (251)
T 3m19_A 24 KSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPL 100 (251)
T ss_dssp CCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred CCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccCh
Confidence 4455 5777666 599999999999998888899999999999999999999888999999999999999999999888
Q ss_pred hhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEec
Q 043388 82 RWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDL 161 (854)
Q Consensus 82 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~L 161 (854)
..|.++++|++|+|++|+|+ .+|...|.++++|++|++++|+++.+ .+..|.++++|++|+|
T Consensus 101 ~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~~~~~~~l~~L~~L~L 162 (251)
T 3m19_A 101 GVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSI-----------------PAGAFDKLTNLQTLSL 162 (251)
T ss_dssp TTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCC-----------------CTTTTTTCTTCCEEEC
T ss_pred hHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCcc-----------------CHHHcCcCcCCCEEEC
Confidence 99999999999999999999 89988899999999998888877644 2457899999999999
Q ss_pred CCCcCcccCCcCccccCCCCeEecccccccCC
Q 043388 162 SGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMG 193 (854)
Q Consensus 162 s~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~ 193 (854)
++|+|+++++..|..+++|++|+|++|.+...
T Consensus 163 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 163 STNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999999999999999999999999998643
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=4e-23 Score=223.09 Aligned_cols=244 Identities=16% Similarity=0.196 Sum_probs=160.5
Q ss_pred chhhhcC--CCCCEEecccccccccCCccccCcCCCCeeeccccccccc-CCcCccCCCCCcEEecccccCcccChhhhc
Q 043388 9 PEEIGSL--LNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQ-IPTTLGLLRNLVYLNVAENQFSGMFPRWIC 85 (854)
Q Consensus 9 p~~~~~l--~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 85 (854)
|..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..|..|+
T Consensus 61 ~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~ 139 (336)
T 2ast_B 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLA 139 (336)
T ss_dssp HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHT
T ss_pred HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHh
Confidence 5677777 8999999999999976655 56799999999999999866 888899999999999999999988999999
Q ss_pred CCCCCceeeeccc-ccccccCcccccCCCCCcEEEcccC-CCCCCceeeccCccCCCCCCCCCCccccCCC-CCCEEecC
Q 043388 86 NISSLEFIYLTVN-RFSGSLPFDILVNLPNLKELYLTFC-SLKNLWWLNLEQNNLGMGTASSIPDSLSNAS-NLERLDLS 162 (854)
Q Consensus 86 ~l~~L~~L~L~~N-~l~~~~~~~~~~~l~~L~~L~l~~n-~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~-~L~~L~Ls 162 (854)
.+++|++|+|++| .+++.--...+.++++|++|++++| .++. ..++..+..++ +|++|+|+
T Consensus 140 ~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~----------------~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 140 KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE----------------KHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH----------------HHHHHHHHHSCTTCCEEECC
T ss_pred cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh----------------HHHHHHHHhcccCCCEEEeC
Confidence 9999999999999 6763212233555666666666555 4431 01344556666 66666666
Q ss_pred CCc--Cc-ccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEE
Q 043388 163 GNQ--FK-GKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFR 239 (854)
Q Consensus 163 ~N~--i~-~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~ 239 (854)
+|. ++ ...+..+..+++|++|++++|.+ +++..+..+..++ +|+.|+
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~-----------------------------l~~~~~~~l~~l~-~L~~L~ 253 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM-----------------------------LKNDCFQEFFQLN-YLQHLS 253 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTT-----------------------------CCGGGGGGGGGCT-TCCEEE
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCc-----------------------------CCHHHHHHHhCCC-CCCEee
Confidence 663 33 22233444455555555555541 3333344444442 455555
Q ss_pred ccCCc-ccccCCccccccccCCeeeccccccccCCCCCccCcc-cCceeeCccccccccCCccccC
Q 043388 240 IGGNQ-ISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQ-HLQQLYMFRNFLQGSIPPSLGN 303 (854)
Q Consensus 240 l~~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~ 303 (854)
+++|. ++......+.++++|+.|++++| +....+..+. +|..|++++|++++..|..+++
T Consensus 254 l~~~~~~~~~~~~~l~~~~~L~~L~l~~~----i~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 254 LSRCYDIIPETLLELGEIPTLKTLQVFGI----VPDGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTS----SCTTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCCCCHHHHHHHhcCCCCCEEeccCc----cCHHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 55542 21111124556677777777777 2233444443 3666777777777777766654
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=7e-22 Score=197.21 Aligned_cols=181 Identities=24% Similarity=0.279 Sum_probs=136.0
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
-+.++++++.++ .+|..+. ++|++|++++|++++..+..|+.+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 9 ~~~v~c~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCcc-CCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 367888888888 5665553 5788888888888877777788888888888888888877777788888888888888
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+|+ .+|...|.++++|++|++++|+++.+ .+..|.++++|++|+|++|+|+++++..|..+
T Consensus 86 n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~-----------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 147 (208)
T 2o6s_A 86 NQLQ-SLPNGVFDKLTQLKELALNTNQLQSL-----------------PDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRL 147 (208)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CcCC-ccCHhHhcCccCCCEEEcCCCcCccc-----------------CHhHhccCCcCCEEECCCCccceeCHHHhccC
Confidence 8887 77777777777777777777666533 23446778888888888888887777777777
Q ss_pred CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhc
Q 043388 178 KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLS 232 (854)
Q Consensus 178 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 232 (854)
++|++|+|++|.+. ..+++|++|+++.|+++|.+|..++.+.
T Consensus 148 ~~L~~L~l~~N~~~-------------~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 148 TSLQYIWLHDNPWD-------------CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTCCEEECCSCCBC-------------CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred CCccEEEecCCCee-------------cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 78888888777653 3455677777777777777776666554
No 350
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.1e-22 Score=210.04 Aligned_cols=147 Identities=19% Similarity=0.175 Sum_probs=113.8
Q ss_pred HHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccc------------------cchHHHHHHHHHHHhccCCCe
Q 043388 546 ATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK------------------GAFRSFVAECEALRNIRHRNL 607 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~ni 607 (854)
....|.+.+.||+|+||.||+|.+ .+++.||+|+++.... .....+.+|+.++++++|
T Consensus 88 ~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~--- 163 (282)
T 1zar_A 88 SGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--- 163 (282)
T ss_dssp TTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---
T ss_pred CCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---
Confidence 334566779999999999999999 6899999999964321 124568899999999985
Q ss_pred eeEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCC
Q 043388 608 IKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKP 687 (854)
Q Consensus 608 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp 687 (854)
+++.+++.. + ..++||||++||+|.+ +... +...++.|++.||+|||+. +|+||||||
T Consensus 164 ~~v~~~~~~-~-----~~~lvmE~~~g~~L~~-l~~~------------~~~~i~~qi~~~l~~lH~~---giiHrDlkp 221 (282)
T 1zar_A 164 LAVPKVYAW-E-----GNAVLMELIDAKELYR-VRVE------------NPDEVLDMILEEVAKFYHR---GIVHGDLSQ 221 (282)
T ss_dssp SSSCCEEEE-E-----TTEEEEECCCCEEGGG-CCCS------------CHHHHHHHHHHHHHHHHHT---TEECSCCST
T ss_pred CCcCeEEec-c-----ceEEEEEecCCCcHHH-cchh------------hHHHHHHHHHHHHHHHHHC---CCEeCCCCH
Confidence 444444432 1 4699999999999998 4221 2346999999999999999 999999999
Q ss_pred CceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCccccCC
Q 043388 688 SNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMG 735 (854)
Q Consensus 688 ~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 735 (854)
+|||++ ++..++ |||+|+. +..|+|||++.+
T Consensus 222 ~NILl~-~~~vkl~DFG~a~~----------------~~~~~a~e~l~r 253 (282)
T 1zar_A 222 YNVLVS-EEGIWIIDFPQSVE----------------VGEEGWREILER 253 (282)
T ss_dssp TSEEEE-TTEEEECCCTTCEE----------------TTSTTHHHHHHH
T ss_pred HHEEEE-CCcEEEEECCCCeE----------------CCCCCHHHHHHH
Confidence 999999 665555 9999852 445788998643
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.8e-21 Score=221.48 Aligned_cols=108 Identities=27% Similarity=0.322 Sum_probs=51.6
Q ss_pred CCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhc
Q 043388 153 ASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLS 232 (854)
Q Consensus 153 l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 232 (854)
+++|++|+|++|+|+++++ .+++|++|+|++|+|+.++. |. ++|+.|+|++|+|+ .+|. +..
T Consensus 139 l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~L~~lp~--------l~--~~L~~L~Ls~N~L~-~lp~-~~~-- 200 (571)
T 3cvr_A 139 PALLEYINADNNQLTMLPE----LPTSLEVLSVRNNQLTFLPE--------LP--ESLEALDVSTNLLE-SLPA-VPV-- 200 (571)
T ss_dssp CTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC--------CC--TTCCEEECCSSCCS-SCCC-CC---
T ss_pred CccccEEeCCCCccCcCCC----cCCCcCEEECCCCCCCCcch--------hh--CCCCEEECcCCCCC-chhh-HHH--
Confidence 3444444444444444322 23444444444444443221 11 44555555555554 3443 222
Q ss_pred ccc-------cEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCc
Q 043388 233 STM-------IQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGEL 280 (854)
Q Consensus 233 ~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 280 (854)
.| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..|..|..+
T Consensus 201 -~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 201 -RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp --------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred -hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 33 55666666665 345555556666666666666665555555444
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.3e-20 Score=187.92 Aligned_cols=180 Identities=21% Similarity=0.228 Sum_probs=140.0
Q ss_pred eeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCC
Q 043388 130 WLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSS 209 (854)
Q Consensus 130 ~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~ 209 (854)
.++++.+.+ ..+|..+ .++|++|+|++|+|+++.+..|..+++|++|+|++|+++.++.. .|..+++
T Consensus 11 ~v~c~~~~l-----~~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~ 77 (208)
T 2o6s_A 11 TVECYSQGR-----TSVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG------VFNKLTS 77 (208)
T ss_dssp EEECCSSCC-----SSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT------TTTTCTT
T ss_pred EEEecCCCc-----cCCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh------hcCCCCC
Confidence 344444544 4456544 46899999999999988888899999999999999999876553 4678889
Q ss_pred CcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCc
Q 043388 210 LKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMF 289 (854)
Q Consensus 210 L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 289 (854)
|++|+|++|++++..+..+..+. .|+.|++++|+|++..+..|.++++|++|+|++|+++++.+..|..+++|++|+++
T Consensus 78 L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 156 (208)
T 2o6s_A 78 LTYLNLSTNQLQSLPNGVFDKLT-QLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 156 (208)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCEEECCCCcCCccCHhHhcCcc-CCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEec
Confidence 99999999998855555566665 78888888888887777778888888888888888887777778888888888888
Q ss_pred cccccccCCccccCccccchhccccceecccCCCCCcCCCC
Q 043388 290 RNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQN 330 (854)
Q Consensus 290 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 330 (854)
+|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 157 ~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 157 DNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp SCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 887664 3457888888888888888887776654
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.1e-21 Score=223.27 Aligned_cols=189 Identities=23% Similarity=0.304 Sum_probs=142.2
Q ss_pred CCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCC
Q 043388 65 NLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTAS 144 (854)
Q Consensus 65 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~ 144 (854)
+|+.|+|++|.|++ +|..+ +++|++|+|++|+|+ .+| . .+++|++|++++|+++.
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip-~---~l~~L~~L~Ls~N~l~~----------------- 114 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP-E---LPASLEYLDACDNRLST----------------- 114 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC-C---CCTTCCEEECCSSCCSC-----------------
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc-c---ccCCCCEEEccCCCCCC-----------------
Confidence 77788888888775 55544 367888888888877 676 2 34555555555554432
Q ss_pred CCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccC
Q 043388 145 SIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGEL 224 (854)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 224 (854)
+|. |.+ +|++|+|++|+|+++++ .+++|++|+|++|+|+.++. .+++|++|+|++|++++ +
T Consensus 115 -ip~-l~~--~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~----------~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 115 -LPE-LPA--SLKHLDVDNNQLTMLPE----LPALLEYINADNNQLTMLPE----------LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp -CCC-CCT--TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCCCC----------CCTTCCEEECCSSCCSC-C
T ss_pred -cch-hhc--CCCEEECCCCcCCCCCC----cCccccEEeCCCCccCcCCC----------cCCCcCEEECCCCCCCC-c
Confidence 455 444 89999999999998554 67899999999999986543 46789999999999985 7
Q ss_pred ChhhhhhcccccEEEccCCcccccCCccccccccC-------CeeeccccccccCCCCCccCcccCceeeCccccccccC
Q 043388 225 PHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNL-------IALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSI 297 (854)
Q Consensus 225 p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 297 (854)
|. +. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+
T Consensus 176 p~-l~---~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 176 PE-LP---ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp CC-CC---TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred ch-hh---CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 76 54 58999999999998 5666 655 77 999999999995 5677777999999999999999888
Q ss_pred CccccCccc
Q 043388 298 PPSLGNLTK 306 (854)
Q Consensus 298 ~~~~~~l~~ 306 (854)
|..+..++.
T Consensus 247 p~~l~~l~~ 255 (571)
T 3cvr_A 247 RESLSQQTA 255 (571)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhhc
Confidence 888877654
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=1.7e-20 Score=188.48 Aligned_cols=153 Identities=22% Similarity=0.269 Sum_probs=130.2
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
-+.++++++.++ .+|..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+++.|++|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 368999999998 6787665 6899999999999988888999999999999999999998899999999999999999
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+|+ .+|..+|.++++|++|+|++|+++.+ .|..|.++++|++|+|++|+|+++.+..|..+
T Consensus 90 N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~-----------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 151 (220)
T 2v9t_B 90 NKIT-ELPKSLFEGLFSLQLLLLNANKINCL-----------------RVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL 151 (220)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CcCC-ccCHhHccCCCCCCEEECCCCCCCEe-----------------CHHHcCCCCCCCEEECCCCcCCEECHHHHhCC
Confidence 9998 88888888888888888877777543 35678888888888888888888887778778
Q ss_pred CCCCeEeccccccc
Q 043388 178 KNLWWLNLEQNNLG 191 (854)
Q Consensus 178 ~~L~~L~L~~N~l~ 191 (854)
++|++|+|++|.+.
T Consensus 152 ~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 152 RAIQTMHLAQNPFI 165 (220)
T ss_dssp TTCCEEECCSSCEE
T ss_pred CCCCEEEeCCCCcC
Confidence 78888887777764
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=8.2e-20 Score=184.78 Aligned_cols=153 Identities=22% Similarity=0.264 Sum_probs=114.4
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
.-+.+++++++++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 4567888888887 6666554 778888888888887778888888888888888888877767777888888888888
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+|+ .+|...|..+++|++|++++|+++ .+|..+.++++|++|+|++|+|+++++..|..
T Consensus 97 ~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 97 TNQLT-VLPSAVFDRLVHLKELFMCCNKLT------------------ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCC------------------SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred CCcCC-ccChhHhCcchhhCeEeccCCccc------------------ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 88887 777777777777777776666553 34666777777777777777777777666766
Q ss_pred cCCCCeEeccccccc
Q 043388 177 LKNLWWLNLEQNNLG 191 (854)
Q Consensus 177 l~~L~~L~L~~N~l~ 191 (854)
+++|+.|+|++|.+.
T Consensus 158 l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWD 172 (229)
T ss_dssp CTTCCEEECTTSCBC
T ss_pred CCCCCEEEeeCCCcc
Confidence 666666666666654
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7e-20 Score=183.95 Aligned_cols=153 Identities=22% Similarity=0.219 Sum_probs=115.8
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCC-cCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIP-TTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
-+++++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|+++.+.+|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 468899999988 5777664 356888999998887644 457888888999999888888888888888888888888
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+|+ .++...|.++++|++|++++|+++.+ .|..|.++++|++|+|++|+|+++.|..|..
T Consensus 90 ~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 151 (220)
T 2v70_A 90 SNRLE-NVQHKMFKGLESLKTLMLRSNRITCV-----------------GNDSFIGLSSVRLLSLYDNQITTVAPGAFDT 151 (220)
T ss_dssp SSCCC-CCCGGGGTTCSSCCEEECTTSCCCCB-----------------CTTSSTTCTTCSEEECTTSCCCCBCTTTTTT
T ss_pred CCccC-ccCHhHhcCCcCCCEEECCCCcCCeE-----------------CHhHcCCCccCCEEECCCCcCCEECHHHhcC
Confidence 88887 67777777777777777666666533 3566777777777777777777777777777
Q ss_pred cCCCCeEeccccccc
Q 043388 177 LKNLWWLNLEQNNLG 191 (854)
Q Consensus 177 l~~L~~L~L~~N~l~ 191 (854)
+++|++|+|++|.+.
T Consensus 152 l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 152 LHSLSTLNLLANPFN 166 (220)
T ss_dssp CTTCCEEECCSCCEE
T ss_pred CCCCCEEEecCcCCc
Confidence 766666666666654
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=4.1e-20 Score=194.33 Aligned_cols=171 Identities=22% Similarity=0.349 Sum_probs=81.5
Q ss_pred cCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCc
Q 043388 37 GNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLK 116 (854)
Q Consensus 37 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 116 (854)
..+++|+.|++++|.++. ++ .+..+++|++|+|++|+++++.+ +.++++|++|+|++|+++ .+|. +..+++|+
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~-~~~~--l~~l~~L~ 115 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVK-DLSS--LKDLKKLK 115 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CGGG--GTTCTTCC
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCC-CChh--hccCCCCC
Confidence 344555555555555542 22 24555555555555555554332 555555555555555554 3332 44444444
Q ss_pred EEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCC
Q 043388 117 ELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTAN 196 (854)
Q Consensus 117 ~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~ 196 (854)
+|++++|+++.+ +.+..+++|++|+|++|+|+++ ..|..+++|++|+|++|+|+.+.
T Consensus 116 ~L~L~~n~i~~~-------------------~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~-- 172 (291)
T 1h6t_A 116 SLSLEHNGISDI-------------------NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV-- 172 (291)
T ss_dssp EEECTTSCCCCC-------------------GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--
T ss_pred EEECCCCcCCCC-------------------hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccch--
Confidence 444444433321 2344455555555555555543 34555555555555555554321
Q ss_pred ChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCccc
Q 043388 197 DLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQIS 246 (854)
Q Consensus 197 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~ 246 (854)
.+..+++|+.|+|++|.+++ +| .+..++ .|+.|++++|.++
T Consensus 173 ------~l~~l~~L~~L~L~~N~i~~-l~-~l~~l~-~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 173 ------PLAGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECL 213 (291)
T ss_dssp ------GGTTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEEEEEEEEE
T ss_pred ------hhcCCCccCEEECCCCcCCC-Ch-hhccCC-CCCEEECcCCccc
Confidence 14445555555555555552 22 244443 4555555555554
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=3.3e-20 Score=213.70 Aligned_cols=197 Identities=20% Similarity=0.292 Sum_probs=131.8
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
.+..+.|+.+.+....+ +..+.+|+.|++++|.|+. ++ .|..+++|++|+|++|+|+++.| |..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 45556667776664333 4667777888888887773 33 47777888888888888776544 7778888888888
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccc
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSS 176 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~ 176 (854)
+|+|+ .+| .|..+++|++|+|++|++..+ +.+..+++|+.|+|++|+|+++ ..|..
T Consensus 96 ~N~l~-~l~--~l~~l~~L~~L~Ls~N~l~~l-------------------~~l~~l~~L~~L~Ls~N~l~~l--~~l~~ 151 (605)
T 1m9s_A 96 ENKIK-DLS--SLKDLKKLKSLSLEHNGISDI-------------------NGLVHLPQLESLYLGNNKITDI--TVLSR 151 (605)
T ss_dssp SSCCC-CCT--TSTTCTTCCEEECTTSCCCCC-------------------GGGGGCTTCSEEECCSSCCCCC--GGGGS
T ss_pred CCCCC-CCh--hhccCCCCCEEEecCCCCCCC-------------------ccccCCCccCEEECCCCccCCc--hhhcc
Confidence 88776 454 356666666666666655432 3466777788888888877765 46777
Q ss_pred cCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCcccc
Q 043388 177 LKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIR 254 (854)
Q Consensus 177 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~ 254 (854)
+++|+.|+|++|.|..+.. +..+++|+.|+|++|.|++ +| .+..++ .|+.|+|++|.+++.....+.
T Consensus 152 l~~L~~L~Ls~N~l~~~~~--------l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~-~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 152 LTKLDTLSLEDNQISDIVP--------LAGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp CTTCSEEECCSSCCCCCGG--------GTTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEECCSEEEECCCCCCCS
T ss_pred cCCCCEEECcCCcCCCchh--------hccCCCCCEEECcCCCCCC-Ch-HHccCC-CCCEEEccCCcCcCCcccccc
Confidence 7778888888877764321 5677778888888887774 33 455554 577777777777654333333
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2.3e-20 Score=203.02 Aligned_cols=180 Identities=19% Similarity=0.157 Sum_probs=99.8
Q ss_pred CEEecccccccccCCccccCcCCCCeeecccccccccCCcCcc-CCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 19 QTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLG-LLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 19 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
+++++++|.|+ .+|..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|+++.+.+|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56677777766 4555543 3466666666666666566665 666666666666666666666666666666666666
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCcccc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSL 177 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l 177 (854)
|+|+ .++...|.+++ +|++|+|++|+|+.+.+..|..+
T Consensus 98 N~l~-~~~~~~~~~l~-----------------------------------------~L~~L~L~~N~i~~~~~~~~~~l 135 (361)
T 2xot_A 98 NHLH-TLDEFLFSDLQ-----------------------------------------ALEVLLLYNNHIVVVDRNAFEDM 135 (361)
T ss_dssp SCCC-EECTTTTTTCT-----------------------------------------TCCEEECCSSCCCEECTTTTTTC
T ss_pred CcCC-cCCHHHhCCCc-----------------------------------------CCCEEECCCCcccEECHHHhCCc
Confidence 6665 55544444444 44444444444444444445555
Q ss_pred CCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhccc-ccEEEccCCccc
Q 043388 178 KNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSST-MIQFRIGGNQIS 246 (854)
Q Consensus 178 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~-L~~L~l~~N~l~ 246 (854)
++|++|+|++|+|+.++...+ ..+..+++|+.|+|++|+|++..+..+..++.. ++.|+|++|.+.
T Consensus 136 ~~L~~L~L~~N~l~~l~~~~~---~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 136 AQLQKLYLSQNQISRFPVELI---KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp TTCCEEECCSSCCCSCCGGGT---C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ccCCEEECCCCcCCeeCHHHh---cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 555555555555444332200 001345566666666666663333444444321 356777777765
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=4.7e-20 Score=212.38 Aligned_cols=200 Identities=22% Similarity=0.252 Sum_probs=149.3
Q ss_pred cCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEE
Q 043388 39 LSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKEL 118 (854)
Q Consensus 39 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 118 (854)
+..+..+.++.+.+....+ +..+++|+.|+|++|.|..+ | .|..+++|+.|+|++|+|+ .++. |..+++|+.|
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~-~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLT-DIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCC-CCGG--GGGCTTCCEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCC-CChh--hccCCCCCEE
Confidence 3456777888888875443 57889999999999999854 4 5889999999999999998 5554 7778888887
Q ss_pred EcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCCh
Q 043388 119 YLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDL 198 (854)
Q Consensus 119 ~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~ 198 (854)
+|++|.+..+ | .|..+++|++|+|++|+|+++ ..|..+++|+.|+|++|.|+.+
T Consensus 93 ~Ls~N~l~~l------------------~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l----- 146 (605)
T 1m9s_A 93 FLDENKIKDL------------------S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI----- 146 (605)
T ss_dssp ECCSSCCCCC------------------T-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-----
T ss_pred ECcCCCCCCC------------------h-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-----
Confidence 7777766533 2 577889999999999999875 3588888899999999888754
Q ss_pred hhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCcc
Q 043388 199 DFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVG 278 (854)
Q Consensus 199 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 278 (854)
..+..+++|+.|+|++|.+++..| +..++ .|+.|+|++|.|++. ..+..+++|+.|+|++|++.+.....+.
T Consensus 147 ---~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~-~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 147 ---TVLSRLTKLDTLSLEDNQISDIVP--LAGLT-KLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp ---GGGGSCTTCSEEECCSSCCCCCGG--GTTCT-TCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred ---hhhcccCCCCEEECcCCcCCCchh--hccCC-CCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 246788888888888888885544 55554 677777777777753 3567777777777777777654433333
Q ss_pred C
Q 043388 279 E 279 (854)
Q Consensus 279 ~ 279 (854)
.
T Consensus 219 ~ 219 (605)
T 1m9s_A 219 N 219 (605)
T ss_dssp S
T ss_pred c
Confidence 3
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.5e-20 Score=195.99 Aligned_cols=191 Identities=24% Similarity=0.262 Sum_probs=135.1
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
.+..+.+..+.+++. ..+..+++|++|++++|.++++ + .+..+++|++|+|++|+++ .++. +.++++|++|++
T Consensus 25 ~~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~-~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLT-DIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEEC
T ss_pred HHHHHHhcCCCcccc--cchhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccC-CCcc--cccCCCCCEEEC
Confidence 345556666666633 2345677888888888888754 3 3777888888888888887 5554 667777777777
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDF 200 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 200 (854)
++|.++.+ | .+.++++|++|+|++|+|+++ ..+..+++|++|++++|+++.+
T Consensus 98 ~~n~l~~~------------------~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~------- 149 (291)
T 1h6t_A 98 DENKVKDL------------------S-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI------- 149 (291)
T ss_dssp CSSCCCCG------------------G-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-------
T ss_pred CCCcCCCC------------------h-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-------
Confidence 66665432 2 367778888888888888765 3577788888888888887654
Q ss_pred hhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccC
Q 043388 201 VTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGI 272 (854)
Q Consensus 201 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 272 (854)
..+..+++|++|++++|++++..| +..++ .|+.|++++|.|++. + .+..+++|+.|++++|+++..
T Consensus 150 -~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~-~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 150 -TVLSRLTKLDTLSLEDNQISDIVP--LAGLT-KLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GTTCT-TCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred -hhhccCCCCCEEEccCCccccchh--hcCCC-ccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 246677888888888888875433 66664 688888888888753 3 477788888888888887753
No 362
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=1.9e-20 Score=200.98 Aligned_cols=288 Identities=12% Similarity=0.026 Sum_probs=191.1
Q ss_pred CCCCCEEecccccccccCCccccC-cCCCCeeeccccccc--ccCCcCccCCCCCcEEecccccCcccChhhhcC-----
Q 043388 15 LLNLQTLAIDFNYLTGQLPDFVGN-LSALGMLLIRWNSLG--GQIPTTLGLLRNLVYLNVAENQFSGMFPRWICN----- 86 (854)
Q Consensus 15 l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----- 86 (854)
+.+|++|.++++- ....-..+.. +++|++|||++|+|. ...+..+ +.++.+.+..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhccccccc
Confidence 5677888887642 2111122333 667888888888777 3333333 224555555552 44456666
Q ss_pred ---CCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCC
Q 043388 87 ---ISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSG 163 (854)
Q Consensus 87 ---l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~ 163 (854)
+++|+.|+|.+ .++ .|+..+|.++++|++|++..|.+..+ -+.+|.++.++..+.+..
T Consensus 97 ~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i-----------------~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNL-----------------LPEALADSVTAIFIPLGS 157 (329)
T ss_dssp EEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEE-----------------CTTSSCTTTCEEEECTTC
T ss_pred ccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCcccc-----------------chhhhcCCCceEEecCcc
Confidence 77777777777 676 77777777777777777776666544 134566666666666655
Q ss_pred C----cCcccCCcCccccCCCC-eEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEE
Q 043388 164 N----QFKGKVSIDFSSLKNLW-WLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQF 238 (854)
Q Consensus 164 N----~i~~~~~~~f~~l~~L~-~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L 238 (854)
+ ....+...+|.++.+|+ .+.+....- ++. ..........++..+.+.++-.. .....+....+.|+.+
T Consensus 158 ~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~--l~~---~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l 231 (329)
T 3sb4_A 158 SDAYRFKNRWEHFAFIEGEPLETTIQVGAMGK--LED---EIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSL 231 (329)
T ss_dssp THHHHTSTTTTTSCEEESCCCEEEEEECTTCC--HHH---HHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEE
T ss_pred hhhhhccccccccccccccccceeEEecCCCc--HHH---HHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEE
Confidence 3 22334555666666666 444433211 000 00111123456667777665322 2222333333479999
Q ss_pred EccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCc-eeeCccccccccCCccccCccccchhcccccee
Q 043388 239 RIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQ-QLYMFRNFLQGSIPPSLGNLTKLADLALSFNNL 317 (854)
Q Consensus 239 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 317 (854)
++++|+++.+.+.+|.++++|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.+++++|++
T Consensus 232 ~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 232 DISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp ECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred ECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 99999999888888999999999999998 8888889999999999 999988 77777888999999999999999999
Q ss_pred cccCCCCCcCCCCCccccc
Q 043388 318 QGNIPSSLGNCQNLKGFDA 336 (854)
Q Consensus 318 ~~~~~~~~~~l~~L~~L~l 336 (854)
+.+.+.+|.++++|+.++.
T Consensus 310 ~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 310 TTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CEECTTTTCTTCCCCEEEC
T ss_pred CccchhhhcCCcchhhhcc
Confidence 9888889999999998764
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=3.8e-20 Score=185.93 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=41.1
Q ss_pred ccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCC
Q 043388 386 SLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPT 451 (854)
Q Consensus 386 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 451 (854)
+|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+.+..
T Consensus 105 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l 170 (220)
T 2v9t_B 105 SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHL 170 (220)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGG
T ss_pred CCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCcc
Confidence 355555555555555556666666666666666666665555666666666666666666665543
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=1.4e-20 Score=194.61 Aligned_cols=171 Identities=24% Similarity=0.259 Sum_probs=136.4
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.+.+++.+++++|.+++ ++ .+..+++|++|++++|+|+ .++ .+..+++|++|+|++|+|+++.+ |.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 56678888999999984 44 6888999999999999998 455 68899999999999999996555 8999999999
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcC
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSID 173 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~ 173 (854)
+|++|+|+ .+|... . ++|++|++++|+++. + +.+.++++|++|+|++|+|+++. .
T Consensus 91 ~L~~N~l~-~l~~~~--~-~~L~~L~L~~N~l~~------------------~-~~l~~l~~L~~L~Ls~N~i~~~~--~ 145 (263)
T 1xeu_A 91 SVNRNRLK-NLNGIP--S-ACLSRLFLDNNELRD------------------T-DSLIHLKNLEILSIRNNKLKSIV--M 145 (263)
T ss_dssp ECCSSCCS-CCTTCC--C-SSCCEEECCSSCCSB------------------S-GGGTTCTTCCEEECTTSCCCBCG--G
T ss_pred ECCCCccC-CcCccc--c-CcccEEEccCCccCC------------------C-hhhcCcccccEEECCCCcCCCCh--H
Confidence 99999998 566432 2 566666666555543 2 35788999999999999998773 6
Q ss_pred ccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCccc
Q 043388 174 FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGE 223 (854)
Q Consensus 174 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 223 (854)
+..+++|++|+|++|+|+.+ ..+..+++|+.|++++|.+++.
T Consensus 146 l~~l~~L~~L~L~~N~i~~~--------~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 146 LGFLSKLEVLDLHGNEITNT--------GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp GGGCTTCCEEECTTSCCCBC--------TTSTTCCCCCEEEEEEEEEECC
T ss_pred HccCCCCCEEECCCCcCcch--------HHhccCCCCCEEeCCCCcccCC
Confidence 88899999999999998765 2477888899999999888743
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.9e-20 Score=200.39 Aligned_cols=168 Identities=23% Similarity=0.327 Sum_probs=138.9
Q ss_pred CcccccCchhhhcCCCCCEEecccccccccCCcccc-CcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDFNYLTGQLPDFVG-NLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
|+|+ .+|..+.. .+++|+|++|+|++..+..|. .+++|+.|+|++|+|+++.+..|..+++|++|+|++|+|+++.
T Consensus 28 ~~l~-~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~ 104 (361)
T 2xot_A 28 QQLP-NVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLD 104 (361)
T ss_dssp SCCS-SCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCcC-ccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCC
Confidence 5566 57876654 799999999999987888887 9999999999999999888899999999999999999999988
Q ss_pred hhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCcc-c---cCCCCC
Q 043388 81 PRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDS-L---SNASNL 156 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~-~---~~l~~L 156 (854)
+..|.++++|++|+|++|+|+ .++...|.++++|++|+|++|+++.+ |.. | ..+++|
T Consensus 105 ~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~~l------------------~~~~~~~~~~l~~L 165 (361)
T 2xot_A 105 EFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQISRF------------------PVELIKDGNKLPKL 165 (361)
T ss_dssp TTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCSC------------------CGGGTC----CTTC
T ss_pred HHHhCCCcCCCEEECCCCccc-EECHHHhCCcccCCEEECCCCcCCee------------------CHHHhcCcccCCcC
Confidence 899999999999999999998 77777788888888888877776543 333 3 568888
Q ss_pred CEEecCCCcCcccCCcCccccCCC--CeEeccccccc
Q 043388 157 ERLDLSGNQFKGKVSIDFSSLKNL--WWLNLEQNNLG 191 (854)
Q Consensus 157 ~~L~Ls~N~i~~~~~~~f~~l~~L--~~L~L~~N~l~ 191 (854)
++|+|++|+|+.+++..|..++.+ +.|+|++|.+.
T Consensus 166 ~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 166 MLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 888888888887777777777663 66777776653
No 366
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=4.3e-20 Score=185.50 Aligned_cols=158 Identities=18% Similarity=0.154 Sum_probs=105.1
Q ss_pred eeeccccccccCCCCCccCcccCceeeCccccccccCC-ccccCccccchhccccceecccCCCCCcCCCCCcccccCCC
Q 043388 261 ALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIP-PSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHN 339 (854)
Q Consensus 261 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N 339 (854)
.+++++|.++. +|..+. +.+++|+|++|+|++..| ..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555553 233222 234566666666665433 34566666666666666666655666677777777777777
Q ss_pred cccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCc
Q 043388 340 KLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSN 419 (854)
Q Consensus 340 ~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 419 (854)
++++..|.. +.. +.+|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 92 ~l~~~~~~~-------------------------~~~-------l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 139 (220)
T 2v70_A 92 RLENVQHKM-------------------------FKG-------LESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN 139 (220)
T ss_dssp CCCCCCGGG-------------------------GTT-------CSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTS
T ss_pred ccCccCHhH-------------------------hcC-------CcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCC
Confidence 766332221 222 345777888888888777888888888888888888
Q ss_pred ccccccchhhcCccCCCeeecccccCcccCCCCc
Q 043388 420 NLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPTKG 453 (854)
Q Consensus 420 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 453 (854)
+|++..|..|..+++|+.|+|++|+|+|.++..+
T Consensus 140 ~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~ 173 (220)
T 2v70_A 140 QITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAW 173 (220)
T ss_dssp CCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHH
T ss_pred cCCEECHHHhcCCCCCCEEEecCcCCcCCCchHH
Confidence 8888778888888888888888888888776543
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.4e-21 Score=223.81 Aligned_cols=189 Identities=15% Similarity=0.135 Sum_probs=128.1
Q ss_pred cCCCCCcEEecccccCcccChhhhcCCCCCceeeecccc-------------cccccCcccccCCCCCcEEE-cccCCCC
Q 043388 61 GLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNR-------------FSGSLPFDILVNLPNLKELY-LTFCSLK 126 (854)
Q Consensus 61 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~~l~~L~~L~-l~~n~l~ 126 (854)
..+++|+.|+|++|+|+ .+|+.++++++|+.|++++|. +. ..++..+.++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~-~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPL-LYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTG-GGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccc-cCCHHHHHHHHhcccCcchhhcccc
Confidence 55778888888888887 678888888888888887764 34 23445677888888888 7888888
Q ss_pred CCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccC
Q 043388 127 NLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTN 206 (854)
Q Consensus 127 ~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~ 206 (854)
+|+.+.+++|.| +.+|. ..|+.|+|++|+|++++ . |..+++|++|+|++|+|+.++ ..+.+
T Consensus 424 ~L~~l~l~~n~i-----~~l~~-----~~L~~L~Ls~n~l~~lp-~-~~~l~~L~~L~Ls~N~l~~lp-------~~~~~ 484 (567)
T 1dce_A 424 DLRSKFLLENSV-----LKMEY-----ADVRVLHLAHKDLTVLC-H-LEQLLLVTHLDLSHNRLRALP-------PALAA 484 (567)
T ss_dssp HHHHHHHHHHHH-----HHHHH-----TTCSEEECTTSCCSSCC-C-GGGGTTCCEEECCSSCCCCCC-------GGGGG
T ss_pred hhhhhhhhcccc-----cccCc-----cCceEEEecCCCCCCCc-C-ccccccCcEeecCcccccccc-------hhhhc
Confidence 888888888877 33332 25888999999888754 3 888888888888888776443 24566
Q ss_pred CCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccC-CccccccccCCeeeccccccccCC
Q 043388 207 CSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTI-PSGIRNLVNLIALTIEVNQLHGII 273 (854)
Q Consensus 207 l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~ 273 (854)
+++|+.|+|++|+|++ +| .+..++ .|+.|+|++|+|++.. |..|+++++|+.|+|++|+|++.+
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~-~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLP-RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCS-SCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCC-CCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 6677777777776663 44 444443 4555555555555444 555555555555555555555443
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=1.2e-19 Score=187.72 Aligned_cols=125 Identities=24% Similarity=0.252 Sum_probs=73.4
Q ss_pred CcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcE
Q 043388 38 NLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKE 117 (854)
Q Consensus 38 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 117 (854)
.+.++..+++++|.+++. + .+..+++|++|++++|.|+. +| .+..+++|++|+|++|+|+ .+|. |.++++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQIS-DLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccC-CChh--hccCCCCCE
Confidence 456677777777777743 3 56777777777777777774 34 5777777777777777776 4443 555555555
Q ss_pred EEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEeccccccc
Q 043388 118 LYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLG 191 (854)
Q Consensus 118 L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 191 (854)
|++++|+++.+ |. +.. ++|++|+|++|+|+++. .|..+++|++|+|++|+|+
T Consensus 90 L~L~~N~l~~l------------------~~-~~~-~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 90 LSVNRNRLKNL------------------NG-IPS-ACLSRLFLDNNELRDTD--SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp EECCSSCCSCC------------------TT-CCC-SSCCEEECCSSCCSBSG--GGTTCTTCCEEECTTSCCC
T ss_pred EECCCCccCCc------------------Cc-ccc-CcccEEEccCCccCCCh--hhcCcccccEEECCCCcCC
Confidence 55555554432 11 111 55556666666555432 3444444444444444443
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=1.1e-19 Score=214.71 Aligned_cols=199 Identities=22% Similarity=0.198 Sum_probs=109.6
Q ss_pred ecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCcc
Q 043388 70 NVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDS 149 (854)
Q Consensus 70 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~ 149 (854)
+++.|.+. ..|+.|..+++|+.|+|++|+|+ .+|..+| ++++|++|+|++|.+ +.+|..
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~-~l~~L~~L~Ls~N~l------------------~~lp~~ 265 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIF-KYDFLTRLYLNGNSL------------------TELPAE 265 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGG-GCCSCSCCBCTTSCC------------------SCCCGG
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhc-CCCCCCEEEeeCCcC------------------cccChh
Confidence 44455555 56778888888888888888887 7887765 555555555555544 346788
Q ss_pred ccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhh
Q 043388 150 LSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIA 229 (854)
Q Consensus 150 ~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 229 (854)
|.++++|++|+|++|+|+ .+|..|..+++|++|+|++|.|+.++. .|..+++|++|+|++|.|++.+|..+.
T Consensus 266 ~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~-------~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (727)
T 4b8c_D 266 IKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPW-------EFGNLCNLQFLGVEGNPLEKQFLKILT 337 (727)
T ss_dssp GGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCS-------STTSCTTCCCEECTTSCCCSHHHHHHH
T ss_pred hhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccCh-------hhhcCCCccEEeCCCCccCCCChHHHh
Confidence 888999999999999998 447788999999999999998876654 378889999999999999988888887
Q ss_pred hhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccch
Q 043388 230 NLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLAD 309 (854)
Q Consensus 230 ~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 309 (854)
.+......++|++|.+++.+|.. |..|+++.|... -..+ +.+.+..+..+..+..+..
T Consensus 338 ~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~ 395 (727)
T 4b8c_D 338 EKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTF 395 (727)
T ss_dssp HHHHHHHHHHHHHCCCCCCCCCC---------------------------------------------------------
T ss_pred hcchhhhHHhhccCcccCcCccc------cceeEeeccccc---cccc-------------CCccccccchhhcccccce
Confidence 76544445677777777766653 344555555111 0111 1233334444556666777
Q ss_pred hccccceecc
Q 043388 310 LALSFNNLQG 319 (854)
Q Consensus 310 L~L~~N~l~~ 319 (854)
..+++|-+.+
T Consensus 396 ~~ls~Nil~~ 405 (727)
T 4b8c_D 396 TVLSYNTLCQ 405 (727)
T ss_dssp ------CCCG
T ss_pred eeeecccccc
Confidence 7778887653
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=5.5e-19 Score=174.34 Aligned_cols=153 Identities=16% Similarity=0.190 Sum_probs=76.3
Q ss_pred cCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCc
Q 043388 37 GNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLK 116 (854)
Q Consensus 37 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 116 (854)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|+|++|++++..| ..|..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKI-PNLSGLTSLT 115 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGS-CCCTTCTTCC
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccC-hhhcCCCCCC
Confidence 44445555555555555 333 35555555555555554441 1245555555555555555542222 2244444444
Q ss_pred EEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCc-CcccCCcCccccCCCCeEecccccccCCCC
Q 043388 117 ELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQ-FKGKVSIDFSSLKNLWWLNLEQNNLGMGTA 195 (854)
Q Consensus 117 ~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~-i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~ 195 (854)
+|++++|+++. ..|..|.++++|++|+|++|+ ++.+. .|..+++|++|++++|.++.++
T Consensus 116 ~L~Ls~n~i~~-----------------~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~~~- 175 (197)
T 4ezg_A 116 LLDISHSAHDD-----------------SILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHDYR- 175 (197)
T ss_dssp EEECCSSBCBG-----------------GGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCCCT-
T ss_pred EEEecCCccCc-----------------HhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcChH-
Confidence 44444444321 124455556666666666665 44432 4556666666666666655432
Q ss_pred CChhhhhhccCCCCCcEEEcccCcCc
Q 043388 196 NDLDFVTLLTNCSSLKALSLCDNQFG 221 (854)
Q Consensus 196 ~~~~~~~~~~~l~~L~~L~L~~N~l~ 221 (854)
.+..+++|++|++++|++.
T Consensus 176 -------~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 176 -------GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp -------TGGGCSSCCEEEECBC---
T ss_pred -------HhccCCCCCEEEeeCcccC
Confidence 2455566666666666654
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=2.2e-19 Score=212.25 Aligned_cols=236 Identities=20% Similarity=0.189 Sum_probs=123.9
Q ss_pred CCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcc
Q 043388 154 SNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSS 233 (854)
Q Consensus 154 ~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 233 (854)
+.++.|+|++|.+..+. ...|+.++|+.|.|. .++++.|.+. ..|..+..+.
T Consensus 173 ~~~~~l~L~~n~~~~~~------~~~l~~l~Ls~~~i~--------------------~~~~~~n~~~-~~~~~~~~l~- 224 (727)
T 4b8c_D 173 PLTPKIELFANGKDEAN------QALLQHKKLSQYSID--------------------EDDDIENRMV-MPKDSKYDDQ- 224 (727)
T ss_dssp ----------------------------------------------------------------------------CCC-
T ss_pred CccceEEeeCCCCCcch------hhHhhcCccCccccc--------------------Ccccccccee-cChhhhccCC-
Confidence 56788888888887532 233566667766653 3345566665 5566666665
Q ss_pred cccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccc
Q 043388 234 TMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALS 313 (854)
Q Consensus 234 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 313 (854)
.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|+ .+|..|+++++|++|+|+
T Consensus 225 ~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 225 LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 6888888888887 66777778999999999999999 67888999999999999999999 779999999999999999
Q ss_pred cceecccCCCCCcCCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeecc
Q 043388 314 FNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDIS 393 (854)
Q Consensus 314 ~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls 393 (854)
+|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+.........+++++|.+++.+|.. |..|+++
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-------------l~~l~l~ 367 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-------------RRFIEIN 367 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------------
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-------------cceeEee
Confidence 99998 678889999999999999999999888887766555445788888888776643 4456666
Q ss_pred CcccccCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCC
Q 043388 394 SNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVP 450 (854)
Q Consensus 394 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 450 (854)
.|... -. ..+.|++..+..+.++..+....+++|-+.+...
T Consensus 368 ~n~~~---~~-------------~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~ 408 (727)
T 4b8c_D 368 TDGEP---QR-------------EYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYA 408 (727)
T ss_dssp --------------------------------------------------CCCGGGC
T ss_pred ccccc---cc-------------ccCCccccccchhhcccccceeeeeccccccccC
Confidence 66111 01 1123444445555666677777888888765444
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=3.6e-21 Score=220.47 Aligned_cols=211 Identities=16% Similarity=0.123 Sum_probs=137.5
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.+++|+.|+|++|+|+ .+|..++++++|+.|++++|......|. .+..+.+.+..|..++++++|+.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~L 414 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKAV 414 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhcccC
Confidence 3455555555555554 4555555555555555544431000000 000011445566666666666666
Q ss_pred e-ecccccccccCcccccCCCCCcEEEcccCCC-----CCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCc
Q 043388 94 Y-LTVNRFSGSLPFDILVNLPNLKELYLTFCSL-----KNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFK 167 (854)
Q Consensus 94 ~-L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l-----~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~ 167 (854)
+ ++.|.+. .++ .+.++.|.+ ..|+.|+|++|.| +.+|. |.++++|++|+|++|+|+
T Consensus 415 ~~l~~n~~~-~L~-----------~l~l~~n~i~~l~~~~L~~L~Ls~n~l-----~~lp~-~~~l~~L~~L~Ls~N~l~ 476 (567)
T 1dce_A 415 DPMRAAYLD-DLR-----------SKFLLENSVLKMEYADVRVLHLAHKDL-----TVLCH-LEQLLLVTHLDLSHNRLR 476 (567)
T ss_dssp CGGGHHHHH-HHH-----------HHHHHHHHHHHHHHTTCSEEECTTSCC-----SSCCC-GGGGTTCCEEECCSSCCC
T ss_pred cchhhcccc-hhh-----------hhhhhcccccccCccCceEEEecCCCC-----CCCcC-ccccccCcEeecCccccc
Confidence 6 5555443 222 122222221 1245566666666 34676 899999999999999999
Q ss_pred ccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccC-ChhhhhhcccccEEEccCCccc
Q 043388 168 GKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGEL-PHSIANLSSTMIQFRIGGNQIS 246 (854)
Q Consensus 168 ~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~~L~~L~l~~N~l~ 246 (854)
..|..|..+++|++|+|++|+|+.++ .+.++++|++|+|++|+|++.. |..+..++ .|+.|+|++|.|+
T Consensus 477 -~lp~~~~~l~~L~~L~Ls~N~l~~lp--------~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~-~L~~L~L~~N~l~ 546 (567)
T 1dce_A 477 -ALPPALAALRCLEVLQASDNALENVD--------GVANLPRLQELLLCNNRLQQSAAIQPLVSCP-RLVLLNLQGNSLC 546 (567)
T ss_dssp -CCCGGGGGCTTCCEEECCSSCCCCCG--------GGTTCSSCCEEECCSSCCCSSSTTGGGGGCT-TCCEEECTTSGGG
T ss_pred -ccchhhhcCCCCCEEECCCCCCCCCc--------ccCCCCCCcEEECCCCCCCCCCCcHHHhcCC-CCCEEEecCCcCC
Confidence 45678999999999999999998643 4788999999999999999776 99999987 7999999999999
Q ss_pred ccCCcc---ccccccCCeeec
Q 043388 247 GTIPSG---IRNLVNLIALTI 264 (854)
Q Consensus 247 ~~~~~~---~~~l~~L~~L~L 264 (854)
+.+|.. +..+++|+.|++
T Consensus 547 ~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 547 QEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp GSSSCTTHHHHHCTTCSEEEC
T ss_pred CCccHHHHHHHHCcccCccCC
Confidence 765532 334777887764
No 373
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3.2e-18 Score=173.07 Aligned_cols=156 Identities=22% Similarity=0.255 Sum_probs=134.5
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
.-+.+++++++++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|...|.++++|++|+|
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~L 95 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDL 95 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEEC
Confidence 4678999999998 6777664 89999999999999999999999999999999999998 899888999999998888
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChhh
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDF 200 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~ 200 (854)
++|+++.+ .+..|..+++|++|+|++|+|+. .|..+..+++|++|+|++|+|+.++..
T Consensus 96 s~N~l~~l-----------------~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~l~~L~~L~L~~N~l~~~~~~---- 153 (229)
T 3e6j_A 96 GTNQLTVL-----------------PSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSIPHG---- 153 (229)
T ss_dssp CSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCCCS-CCTTGGGCTTCSEEECCSSCCCCCCTT----
T ss_pred CCCcCCcc-----------------ChhHhCcchhhCeEeccCCcccc-cCcccccCCCCCEEECCCCcCCccCHH----
Confidence 88877644 24567889999999999999994 467789999999999999999877654
Q ss_pred hhhccCCCCCcEEEcccCcCcccC
Q 043388 201 VTLLTNCSSLKALSLCDNQFGGEL 224 (854)
Q Consensus 201 ~~~~~~l~~L~~L~L~~N~l~~~~ 224 (854)
.|..+++|+.|+|++|.+....
T Consensus 154 --~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 154 --AFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp --TTTTCTTCCEEECTTSCBCTTB
T ss_pred --HHhCCCCCCEEEeeCCCccCCc
Confidence 5778899999999999987543
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=6e-19 Score=181.78 Aligned_cols=137 Identities=19% Similarity=0.189 Sum_probs=105.4
Q ss_pred ccccCccCCCcceEEEEeEECCCceE--EEEEEeeccccc------------------------chHHHHHHHHHHHhcc
Q 043388 550 FASSNMIGQGSFGSVYKGILGGEEMI--VAVKVINLKQKG------------------------AFRSFVAECEALRNIR 603 (854)
Q Consensus 550 ~~~~~~lg~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 603 (854)
|.+.+.||+|+||.||+|.+..+|+. ||||+++..... ....+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999557888 999997543111 0135789999999998
Q ss_pred CCCe--eeEEEEeeccCCCCCceeeEEEeeccC-C----CHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHH-hc
Q 043388 604 HRNL--IKIITICSSIDSKGADFKALVFEYMEN-G----SLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLH-HH 675 (854)
Q Consensus 604 h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH-~~ 675 (854)
|+++ ..++++ . ..++||||+.+ | +|.++... .++.++..++.|++.||+||| +.
T Consensus 129 ~~~i~~p~~~~~----~-----~~~lVmE~~g~~g~~~~~L~~~~~~---------~~~~~~~~i~~qi~~~l~~lH~~~ 190 (258)
T 1zth_A 129 EAGVSVPQPYTY----M-----KNVLLMEFIGEDELPAPTLVELGRE---------LKELDVEGIFNDVVENVKRLYQEA 190 (258)
T ss_dssp HTTCCCCCEEEE----E-----TTEEEEECCEETTEECCBHHHHGGG---------GGGSCHHHHHHHHHHHHHHHHHTS
T ss_pred hCCCCCCeEEEc----C-----CCEEEEEecCCCCCccccHHHHhhc---------cChHHHHHHHHHHHHHHHHHHHHC
Confidence 8753 444443 1 35899999942 4 67665432 123456789999999999999 88
Q ss_pred CCCCeEeecCCCCceEecCCccccccccccccc
Q 043388 676 CQPPIVHGDLKPSNVLLDHDMVAHQNFSLSHQL 708 (854)
Q Consensus 676 ~~~~ivH~Dlkp~NIll~~~~~~~~Dfg~~~~~ 708 (854)
+|+||||||+|||++. .++++|||+|...
T Consensus 191 ---givHrDlkp~NILl~~-~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 ---ELVHADLSEYNIMYID-KVYFIDMGQAVTL 219 (258)
T ss_dssp ---CEECSSCSTTSEEESS-SEEECCCTTCEET
T ss_pred ---CEEeCCCCHHHEEEcC-cEEEEECcccccC
Confidence 9999999999999999 6666799999754
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=1.7e-18 Score=185.78 Aligned_cols=265 Identities=10% Similarity=0.025 Sum_probs=180.4
Q ss_pred hhhc-CCCCCEEeccccccc--ccCCccccCcCCCCeeecccccccccCCcCccC--------CCCCcEEecccccCccc
Q 043388 11 EIGS-LLNLQTLAIDFNYLT--GQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGL--------LRNLVYLNVAENQFSGM 79 (854)
Q Consensus 11 ~~~~-l~~L~~L~L~~n~l~--~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--------l~~L~~L~Ls~N~l~~~ 79 (854)
.+.. +++|++|||++|+|. ...+..+ +.+..+.+..|.| .+.+|.+ +++|+.|+|.+ .++.+
T Consensus 43 ~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I 115 (329)
T 3sb4_A 43 HLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNI 115 (329)
T ss_dssp HHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEE
T ss_pred HHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccch
Confidence 3444 788999999999998 3333333 3356667777744 4678888 99999999999 89989
Q ss_pred ChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCC----CCCCceeeccCccCCCCCCCCCCccccCCCC
Q 043388 80 FPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCS----LKNLWWLNLEQNNLGMGTASSIPDSLSNASN 155 (854)
Q Consensus 80 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~----l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~ 155 (854)
.+.+|.++++|++|+|++|.++ .++..+|.++.++..+.+..+. +..+ -+.+|.++.+
T Consensus 116 ~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i-----------------~~~~f~~~~~ 177 (329)
T 3sb4_A 116 EDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRW-----------------EHFAFIEGEP 177 (329)
T ss_dssp CTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTT-----------------TTSCEEESCC
T ss_pred hHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhccccc-----------------cccccccccc
Confidence 9999999999999999999998 8999999998888877765421 1111 1234555666
Q ss_pred CC-EEecCCCcCcccCCcCc---cccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhh
Q 043388 156 LE-RLDLSGNQFKGKVSIDF---SSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANL 231 (854)
Q Consensus 156 L~-~L~Ls~N~i~~~~~~~f---~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 231 (854)
|+ .+++....- +....| ....+++.+.+.++-.. .++......+++|+.|+|++|+++...+.+|.++
T Consensus 178 L~~~i~~~~~~~--l~~~~~~~~~~~~~~~~l~~~~~l~~------~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~ 249 (329)
T 3sb4_A 178 LETTIQVGAMGK--LEDEIMKAGLQPRDINFLTIEGKLDN------ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQK 249 (329)
T ss_dssp CEEEEEECTTCC--HHHHHHHTTCCGGGCSEEEEEECCCH------HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTC
T ss_pred cceeEEecCCCc--HHHHHhhcccCccccceEEEeeeecH------HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCC
Confidence 66 444443211 111111 12455566666554211 1111222236777777777777774444455555
Q ss_pred cccccEEEccCCcccccCCccccccccCC-eeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchh
Q 043388 232 SSTMIQFRIGGNQISGTIPSGIRNLVNLI-ALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADL 310 (854)
Q Consensus 232 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 310 (854)
. .|+.+++.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.+++++|.++.+.+.+|.++++|+.+
T Consensus 250 ~-~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 250 K-YLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp T-TCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred C-CCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 4 6777777776 6667777788888888 888877 6777777888888888888888888887777788888888776
Q ss_pred c
Q 043388 311 A 311 (854)
Q Consensus 311 ~ 311 (854)
+
T Consensus 327 y 327 (329)
T 3sb4_A 327 Y 327 (329)
T ss_dssp E
T ss_pred c
Confidence 5
No 376
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.76 E-value=2e-17 Score=181.02 Aligned_cols=265 Identities=12% Similarity=0.090 Sum_probs=167.4
Q ss_pred CCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEE
Q 043388 40 SALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELY 119 (854)
Q Consensus 40 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~ 119 (854)
..++.+.+.+ .++.+...+|.+. +|+.++|..| ++.+...+|.+. +|+.+.|.+ .++ .|+..+|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCeee
Confidence 4455555543 3444555555553 5666666555 555555566553 466666654 444 55556666666666655
Q ss_pred cccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCCCCChh
Q 043388 120 LTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLD 199 (854)
Q Consensus 120 l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~ 199 (854)
+..|+++.+. ..+|. .++|+.+.|..| ++.+...+|.++++|+.+++..| ++.+...
T Consensus 187 l~~n~l~~I~-----------------~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~--- 243 (401)
T 4fdw_A 187 LSKTKITKLP-----------------ASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQE--- 243 (401)
T ss_dssp CTTSCCSEEC-----------------TTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTT---
T ss_pred cCCCcceEec-----------------hhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccc---
Confidence 5555444331 12233 355666666533 55556666666666666666543 4444433
Q ss_pred hhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCccc-----ccCCccccccccCCeeeccccccccCCC
Q 043388 200 FVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQIS-----GTIPSGIRNLVNLIALTIEVNQLHGIIP 274 (854)
Q Consensus 200 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 274 (854)
+|.+ ++|+.+.+ .|.++...+.+|.++. .|+.+.+.+|.+. .+.+.+|.++++|+.++|. +.++.+..
T Consensus 244 ---aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~-~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~ 316 (401)
T 4fdw_A 244 ---AFRE-SGITTVKL-PNGVTNIASRAFYYCP-ELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQ 316 (401)
T ss_dssp ---TTTT-CCCSEEEE-ETTCCEECTTTTTTCT-TCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECT
T ss_pred ---cccc-CCccEEEe-CCCccEEChhHhhCCC-CCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhh
Confidence 3444 45666666 3334433344444443 5666666655553 4677889999999999998 55888888
Q ss_pred CCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCC-CCcccccCCCccc
Q 043388 275 DGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQ-NLKGFDASHNKLT 342 (854)
Q Consensus 275 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~ 342 (854)
.+|.++++|+.+.|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 89999999999999665 776778889999 999999999998877778888885 6788888777654
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.74 E-value=5.1e-17 Score=177.80 Aligned_cols=267 Identities=12% Similarity=0.126 Sum_probs=199.0
Q ss_pred cCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 14 SLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 14 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.+..++.+.+.. .++.+...+|.+ .+|+.+.+..| ++.+...+|.+. +|+.++|.+ .++.+.+.+|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 446777777765 355455667776 47888888766 776777788774 688888886 6777777888888888888
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcC
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSID 173 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~ 173 (854)
+|++|+++ .++..+|. ..+|+.+.+.. .++.+ -..+|.++++|+.++|..| ++.+...+
T Consensus 186 ~l~~n~l~-~I~~~aF~-~~~L~~l~lp~-~l~~I-----------------~~~aF~~~~~L~~l~l~~~-l~~I~~~a 244 (401)
T 4fdw_A 186 DLSKTKIT-KLPASTFV-YAGIEEVLLPV-TLKEI-----------------GSQAFLKTSQLKTIEIPEN-VSTIGQEA 244 (401)
T ss_dssp ECTTSCCS-EECTTTTT-TCCCSEEECCT-TCCEE-----------------CTTTTTTCTTCCCEECCTT-CCEECTTT
T ss_pred ecCCCcce-EechhhEe-ecccCEEEeCC-chhee-----------------hhhHhhCCCCCCEEecCCC-ccCccccc
Confidence 88888888 88888887 47777777763 24333 1356778888888888764 67777788
Q ss_pred ccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCc-----ccCChhhhhhcccccEEEccCCccccc
Q 043388 174 FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFG-----GELPHSIANLSSTMIQFRIGGNQISGT 248 (854)
Q Consensus 174 f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~~L~~L~l~~N~l~~~ 248 (854)
|.+ .+|+.+.+ .|.++.+... +|.+|++|+.+++.+|.+. ...+.+|..+. .|+.+.+. +.++.+
T Consensus 245 F~~-~~L~~i~l-p~~i~~I~~~------aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~-~L~~l~l~-~~i~~I 314 (401)
T 4fdw_A 245 FRE-SGITTVKL-PNGVTNIASR------AFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCP-KLARFEIP-ESIRIL 314 (401)
T ss_dssp TTT-CCCSEEEE-ETTCCEECTT------TTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCT-TCCEECCC-TTCCEE
T ss_pred ccc-CCccEEEe-CCCccEEChh------HhhCCCCCCEEEeCCccccCCcccEECHHHhhCCc-cCCeEEeC-CceEEE
Confidence 887 77888888 4556665554 6778888888888877664 23455666665 68888888 457777
Q ss_pred CCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCcc-ccchhccccceec
Q 043388 249 IPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLT-KLADLALSFNNLQ 318 (854)
Q Consensus 249 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 318 (854)
...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++.+|.+....+..|.+++ .++.|++..+.+.
T Consensus 315 ~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 315 GQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7888999999999999655 777888889998 899999999988877777788774 6788888777655
No 378
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=8.3e-18 Score=165.85 Aligned_cols=153 Identities=16% Similarity=0.171 Sum_probs=67.5
Q ss_pred cCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCC
Q 043388 61 GLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGM 140 (854)
Q Consensus 61 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~ 140 (854)
+.+++|++|++++|.|+ .+| .+..+++|++|++++|.++ .++ .|..+++|++|++++|+++.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~------------- 102 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTS------------- 102 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBG-------------
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCc-------------
Confidence 44444555555555554 223 3444555555555555443 222 23444444444444443321
Q ss_pred CCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEeccccc-ccCCCCCChhhhhhccCCCCCcEEEcccCc
Q 043388 141 GTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNN-LGMGTANDLDFVTLLTNCSSLKALSLCDNQ 219 (854)
Q Consensus 141 ~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 219 (854)
..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|. ++.++ .+..+++|++|++++|+
T Consensus 103 ----~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--------~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 103 ----DKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--------PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp ----GGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--------GGGGCSSCCEEECTTBC
T ss_pred ----ccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--------hhcCCCCCCEEECCCCC
Confidence 123344445555555555555544444444555555555555554 43221 23444455555555555
Q ss_pred CcccCChhhhhhcccccEEEccCCccc
Q 043388 220 FGGELPHSIANLSSTMIQFRIGGNQIS 246 (854)
Q Consensus 220 l~~~~p~~~~~l~~~L~~L~l~~N~l~ 246 (854)
+++ ++ .+..++ +|+.|++++|+|.
T Consensus 171 i~~-~~-~l~~l~-~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 171 VHD-YR-GIEDFP-KLNQLYAFSQTIG 194 (197)
T ss_dssp CCC-CT-TGGGCS-SCCEEEECBC---
T ss_pred CcC-hH-HhccCC-CCCEEEeeCcccC
Confidence 542 22 333433 4555555555443
No 379
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=2.6e-17 Score=161.34 Aligned_cols=133 Identities=20% Similarity=0.279 Sum_probs=115.9
Q ss_pred cEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCc-cccccccCCeeeccccccccCCCCCccCcccCceeeCc
Q 043388 211 KALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPS-GIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMF 289 (854)
Q Consensus 211 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 289 (854)
+++++++|+++ .+|..+.. .++.|++++|+|++..+. .|..+++|++|+|++|+|+++.|.+|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 67777777776 67765543 688888888888877665 48899999999999999999999999999999999999
Q ss_pred cccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccch
Q 043388 290 RNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQ 347 (854)
Q Consensus 290 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~ 347 (854)
+|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|++++|.+++..+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 9999988888899999999999999999998899999999999999999999876553
No 380
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=8.6e-18 Score=164.79 Aligned_cols=80 Identities=23% Similarity=0.326 Sum_probs=44.4
Q ss_pred CeeeccccccccCCCCCccCcccCceeeCccccccccCCc-cccCccccchhccccceecccCCCCCcCCCCCcccccCC
Q 043388 260 IALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPP-SLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASH 338 (854)
Q Consensus 260 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~ 338 (854)
+.+++++|+++. +|..+.. +|++|++++|+|++..+. .|..+++|+.|+|++|.|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 566666666653 3333322 566666666666644443 355566666666666666555555555555555555555
Q ss_pred Cccc
Q 043388 339 NKLT 342 (854)
Q Consensus 339 N~l~ 342 (854)
|+++
T Consensus 88 N~l~ 91 (192)
T 1w8a_A 88 NKIK 91 (192)
T ss_dssp CCCC
T ss_pred CcCC
Confidence 5554
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=4.5e-17 Score=156.11 Aligned_cols=136 Identities=18% Similarity=0.198 Sum_probs=85.9
Q ss_pred CCCCEEeccccccc-ccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceee
Q 043388 16 LNLQTLAIDFNYLT-GQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIY 94 (854)
Q Consensus 16 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 94 (854)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 55666666677777777777776643 6666667777777777777665666666666666666
Q ss_pred ecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCC---
Q 043388 95 LTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVS--- 171 (854)
Q Consensus 95 L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~--- 171 (854)
|++|+|+ .+|. +..+..+++|++|+|++|+++++++
T Consensus 102 Ls~N~l~-~~~~----------------------------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~ 140 (168)
T 2ell_A 102 LSGNKLK-DIST----------------------------------------LEPLKKLECLKSLDLFNCEVTNLNDYRE 140 (168)
T ss_dssp CBSSSCC-SSGG----------------------------------------GGGGSSCSCCCEEECCSSGGGTSTTHHH
T ss_pred ccCCccC-cchh----------------------------------------HHHHhcCCCCCEEEeeCCcCcchHHHHH
Confidence 6666665 3331 1345555666666666666665544
Q ss_pred cCccccCCCCeEecccccccCCC
Q 043388 172 IDFSSLKNLWWLNLEQNNLGMGT 194 (854)
Q Consensus 172 ~~f~~l~~L~~L~L~~N~l~~~~ 194 (854)
..|..+++|++|++++|.+..++
T Consensus 141 ~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 141 SVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp HHHTTCSSCCEETTEETTSCBCC
T ss_pred HHHHhCccCcEecCCCCChhhcc
Confidence 35666666666666666665444
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.68 E-value=1.1e-16 Score=153.35 Aligned_cols=140 Identities=23% Similarity=0.208 Sum_probs=95.7
Q ss_pred CCCcEEecccccCc-ccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCC
Q 043388 64 RNLVYLNVAENQFS-GMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGT 142 (854)
Q Consensus 64 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~ 142 (854)
++|++|+|++|.++ +.+|..+..+++|++|+|++|+|+ .+ ..|..+++|++|++++|++..
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-~~--~~~~~l~~L~~L~Ls~N~l~~--------------- 85 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV--SNLPKLPKLKKLELSENRIFG--------------- 85 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-CC--SSCCCCSSCCEEEEESCCCCS---------------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-Ch--hhhccCCCCCEEECcCCcCch---------------
Confidence 45555555555554 344555555555555555555555 33 334445555555544444432
Q ss_pred CCCCCccccCCCCCCEEecCCCcCcccCC-cCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCc
Q 043388 143 ASSIPDSLSNASNLERLDLSGNQFKGKVS-IDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFG 221 (854)
Q Consensus 143 ~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~-~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 221 (854)
.+|..+.++++|++|+|++|+|+++.. ..|..+++|++|++++|.++..+.- ....+..+++|++|++++|.+.
T Consensus 86 --~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~---~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 86 --GLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDY---RESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp --CCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTH---HHHHHTTCSSCCEETTEETTSC
T ss_pred --HHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHH---HHHHHHhCccCcEecCCCCChh
Confidence 246777789999999999999998754 7899999999999999999865430 1136889999999999999998
Q ss_pred ccCChh
Q 043388 222 GELPHS 227 (854)
Q Consensus 222 ~~~p~~ 227 (854)
.+|.+
T Consensus 161 -~~~~~ 165 (168)
T 2ell_A 161 -EAPDS 165 (168)
T ss_dssp -BCCSS
T ss_pred -hcccc
Confidence 66654
No 383
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.67 E-value=2.4e-15 Score=165.55 Aligned_cols=329 Identities=12% Similarity=0.094 Sum_probs=192.8
Q ss_pred ccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCC
Q 043388 34 DFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLP 113 (854)
Q Consensus 34 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~ 113 (854)
.+|.++++|+.+.|.. .++.+-..+|.++++|+.++|..+ ++.+...+|.++++|+.+.+..+ ++ .+...+|.+..
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~aF~~~~ 140 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVEAFKGCD 140 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTTTCC
T ss_pred HHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecceeeeccc
Confidence 3444444555555442 244344444555555555555433 33344444555555544444433 22 34444444433
Q ss_pred CCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCC
Q 043388 114 NLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMG 193 (854)
Q Consensus 114 ~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~ 193 (854)
.++..... ... ..-..+|.++++|+.+.+.++ +..+....|.++.+|+.+++..| +..+
T Consensus 141 ~~~~~~~~--~~~-----------------~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I 199 (394)
T 4fs7_A 141 FKEITIPE--GVT-----------------VIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKII 199 (394)
T ss_dssp CSEEECCT--TCC-----------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEE
T ss_pred ccccccCc--ccc-----------------ccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEe
Confidence 22211111 000 011346888888888888765 44577888888888888888776 5544
Q ss_pred CCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCC
Q 043388 194 TANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGII 273 (854)
Q Consensus 194 ~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 273 (854)
... +|.++..|+.+.+..+... +...+.... .++.+.+..+ ++.+....|.++.+|+.+.+..+... +.
T Consensus 200 ~~~------~F~~~~~L~~i~~~~~~~~--i~~~~~~~~-~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~ 268 (394)
T 4fs7_A 200 RDY------CFAECILLENMEFPNSLYY--LGDFALSKT-GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IG 268 (394)
T ss_dssp CTT------TTTTCTTCCBCCCCTTCCE--ECTTTTTTC-CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-EC
T ss_pred Cch------hhccccccceeecCCCceE--eehhhcccC-CCceEEECCC-ceecccccccccccceeEEcCCCcce-ee
Confidence 443 5778888888877766543 223333332 5777766543 34456667778888888888776544 66
Q ss_pred CCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhcchh
Q 043388 274 PDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVLSIT 353 (854)
Q Consensus 274 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~ 353 (854)
..+|..+..++.+....+.+ ....|..+.+|+.+.+..+ ++.+...+|.++.+|+.+++..+ ++ .++.
T Consensus 269 ~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~------ 336 (394)
T 4fs7_A 269 GSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGK------ 336 (394)
T ss_dssp SCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECT------
T ss_pred ccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhH------
Confidence 67778888888777766543 3446777777777777655 55566677778888887777543 33 2221
Q ss_pred hhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhcCcc
Q 043388 354 TLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLS 433 (854)
Q Consensus 354 ~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 433 (854)
..|.+ |.+|+.+++..| ++.+...+|.++.+|+.+++..+ ++ .+...|.+++
T Consensus 337 ------------------~aF~~-------c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~ 388 (394)
T 4fs7_A 337 ------------------RSFRG-------CTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTT 388 (394)
T ss_dssp ------------------TTTTT-------CTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTC
T ss_pred ------------------HhccC-------CCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCC
Confidence 12222 556777777766 66566677777888888877654 33 3455677777
Q ss_pred CCCee
Q 043388 434 FLEFL 438 (854)
Q Consensus 434 ~L~~L 438 (854)
+|+.+
T Consensus 389 ~L~~I 393 (394)
T 4fs7_A 389 KFKWI 393 (394)
T ss_dssp EEEEE
T ss_pred CCcEE
Confidence 66643
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=2.7e-16 Score=154.00 Aligned_cols=128 Identities=19% Similarity=0.258 Sum_probs=112.7
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
-+++++++|.|+ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|+|+++.+.+|.++++|++|+|++
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 468999999999 6787664 68999999999998 7789999999999999999999999999999999999999999
Q ss_pred cccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCc
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFK 167 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~ 167 (854)
|+|+ .++...|.++++|++|+|++|.++.+ .+..|..+++|++|+|++|.+.
T Consensus 88 N~l~-~i~~~~f~~l~~L~~L~L~~N~l~~~-----------------~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 88 NRLR-CIPPRTFDGLKSLRLLSLHGNDISVV-----------------PEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SCCC-BCCTTTTTTCTTCCEEECCSSCCCBC-----------------CTTTTTTCTTCCEEECCSSCEE
T ss_pred CccC-EeCHHHhCCCCCCCEEECCCCCCCee-----------------ChhhhhcCccccEEEeCCCCee
Confidence 9999 88888899999999988888877644 2346888899999999999886
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=9.7e-17 Score=150.40 Aligned_cols=129 Identities=22% Similarity=0.245 Sum_probs=86.2
Q ss_pred CCCCCEEeccccccc-ccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCcee
Q 043388 15 LLNLQTLAIDFNYLT-GQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFI 93 (854)
Q Consensus 15 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 93 (854)
.++|++|++++|.++ +.+|..++.+++|++|++++|.+++. ..|+.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356777777777776 56777777777777777777777744 667777777777777777776667766667777777
Q ss_pred eecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCC--
Q 043388 94 YLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVS-- 171 (854)
Q Consensus 94 ~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~-- 171 (854)
+|++|+|+ .+| .|..+..+++|++|++++|+++++++
T Consensus 94 ~ls~N~i~-~~~----------------------------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 132 (149)
T 2je0_A 94 NLSGNKIK-DLS----------------------------------------TIEPLKKLENLKSLDLFNCEVTNLNDYR 132 (149)
T ss_dssp ECTTSCCC-SHH----------------------------------------HHGGGGGCTTCCEEECTTCGGGGSTTHH
T ss_pred ECCCCcCC-ChH----------------------------------------HHHHHhhCCCCCEEeCcCCcccchHHHH
Confidence 77777765 322 12445556666666666666665554
Q ss_pred -cCccccCCCCeEecc
Q 043388 172 -IDFSSLKNLWWLNLE 186 (854)
Q Consensus 172 -~~f~~l~~L~~L~L~ 186 (854)
..|..+++|+.|+++
T Consensus 133 ~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 133 ENVFKLLPQLTYLDGY 148 (149)
T ss_dssp HHHHHHCTTCCEETTB
T ss_pred HHHHHHCCCcccccCC
Confidence 455666666666654
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=5.1e-16 Score=152.02 Aligned_cols=128 Identities=26% Similarity=0.361 Sum_probs=95.9
Q ss_pred CCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcc
Q 043388 42 LGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLT 121 (854)
Q Consensus 42 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~ 121 (854)
-+++++++|+|+ .+|..+. ++|++|+|++|+|+ .+|.+|.++++|++|+|++|+|+ .++...|.++++|++|+|+
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCC-EeCHhHccCCCCCCEEECC
Confidence 367889999998 6676553 68999999999998 56788889999999999999988 7777777777777777776
Q ss_pred cCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEeccccccc
Q 043388 122 FCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLG 191 (854)
Q Consensus 122 ~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 191 (854)
+|+++.+ .|..|.++++|++|+|++|+|+.+++..|..+++|+.|+|++|.+.
T Consensus 87 ~N~l~~i-----------------~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 87 YNRLRCI-----------------PPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBC-----------------CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCEe-----------------CHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 6666543 2456777777777777777777766666777777777777666653
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=1.7e-16 Score=168.95 Aligned_cols=135 Identities=15% Similarity=0.194 Sum_probs=99.0
Q ss_pred ccccCccCCCcceEEEEeEECCCceEEEEEEeecccc--------------cchHH--------HHHHHHHHHhccCCCe
Q 043388 550 FASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK--------------GAFRS--------FVAECEALRNIRHRNL 607 (854)
Q Consensus 550 ~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~ni 607 (854)
|++.+.||+|++|.||+|... +|+.||||+++.... ..... ..+|...|.++.+.++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 888999999999999999987 789999999753210 00111 2356777777755443
Q ss_pred --eeEEEEeeccCCCCCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecC
Q 043388 608 --IKIITICSSIDSKGADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDL 685 (854)
Q Consensus 608 --v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dl 685 (854)
...+++. ..+|||||++|++|.++... .....++.|++.+|.|||+. |||||||
T Consensus 176 ~vp~p~~~~---------~~~LVME~i~G~~L~~l~~~------------~~~~~l~~qll~~l~~lH~~---gIVHrDL 231 (397)
T 4gyi_A 176 PVPEPIAQS---------RHTIVMSLVDALPMRQVSSV------------PDPASLYADLIALILRLAKH---GLIHGDF 231 (397)
T ss_dssp SCCCEEEEE---------TTEEEEECCSCEEGGGCCCC------------SCHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCCeeeecc---------CceEEEEecCCccHhhhccc------------HHHHHHHHHHHHHHHHHHHC---CCcCCCC
Confidence 2333321 23799999999888765321 12356889999999999999 9999999
Q ss_pred CCCceEecCCc-----------ccccccccccccc
Q 043388 686 KPSNVLLDHDM-----------VAHQNFSLSHQLD 709 (854)
Q Consensus 686 kp~NIll~~~~-----------~~~~Dfg~~~~~~ 709 (854)
||.|||+++++ ..+|||+-+....
T Consensus 232 Kp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 232 NEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp STTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 99999998775 4567999776543
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=1.2e-15 Score=147.50 Aligned_cols=103 Identities=24% Similarity=0.279 Sum_probs=59.3
Q ss_pred CCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecc
Q 043388 18 LQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTV 97 (854)
Q Consensus 18 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 97 (854)
.+.+++++|+++ .+|..+. ++|++|++++|++++..+..|+.+++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 456666666666 4454333 4666666666666655555566666666666666666655555566666666666666
Q ss_pred cccccccCcccccCCCCCcEEEcccCC
Q 043388 98 NRFSGSLPFDILVNLPNLKELYLTFCS 124 (854)
Q Consensus 98 N~l~~~~~~~~~~~l~~L~~L~l~~n~ 124 (854)
|+|+ .+|...|.++++|++|++++|+
T Consensus 86 N~l~-~~~~~~~~~l~~L~~L~l~~N~ 111 (177)
T 2o6r_A 86 NKLQ-SLPNGVFDKLTQLKELALDTNQ 111 (177)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSC
T ss_pred CCcc-ccCHHHhhCCcccCEEECcCCc
Confidence 6665 4444444444444444443333
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=4.9e-16 Score=150.06 Aligned_cols=134 Identities=20% Similarity=0.184 Sum_probs=77.7
Q ss_pred ccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCC
Q 043388 36 VGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNL 115 (854)
Q Consensus 36 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 115 (854)
+.+..+|+.|++++|+++ .+|......++|++|+|++|+|+++ +.|..+++|++|+|++|+|+ .+|..+|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCccc-ccCcchhhcCCCC
Confidence 445556666666666665 2333222223666666666666644 45666666666666666665 5555555555555
Q ss_pred cEEEcccCCCCCCceeeccCccCCCCCCCCCCc--cccCCCCCCEEecCCCcCcccCCc---CccccCCCCeEecccccc
Q 043388 116 KELYLTFCSLKNLWWLNLEQNNLGMGTASSIPD--SLSNASNLERLDLSGNQFKGKVSI---DFSSLKNLWWLNLEQNNL 190 (854)
Q Consensus 116 ~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~--~~~~l~~L~~L~Ls~N~i~~~~~~---~f~~l~~L~~L~L~~N~l 190 (854)
++|++++|.+..+ |. .+..+++|++|+|++|+++.+++. .+..+++|++|++++|.+
T Consensus 91 ~~L~L~~N~i~~~------------------~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 91 TELILTNNSLVEL------------------GDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CEEECCSCCCCCG------------------GGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CEEECCCCcCCcc------------------hhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 5555555554322 33 566677777777777777654332 366666666666666655
Q ss_pred c
Q 043388 191 G 191 (854)
Q Consensus 191 ~ 191 (854)
.
T Consensus 153 ~ 153 (176)
T 1a9n_A 153 K 153 (176)
T ss_dssp H
T ss_pred H
Confidence 3
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.3e-15 Score=147.34 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=114.1
Q ss_pred CcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCc
Q 043388 210 LKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMF 289 (854)
Q Consensus 210 L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 289 (854)
.+.+++++|+++ .+|..+. +.++.|++++|++++..+..|.++++|++|++++|+|+++.+..|..+++|++|+|+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 467777777777 5665443 378888999998887777788999999999999999998888889999999999999
Q ss_pred cccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccc
Q 043388 290 RNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIP 346 (854)
Q Consensus 290 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p 346 (854)
+|++++..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|++.+..|
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999998777788999999999999999997777778899999999999999986554
No 391
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.61 E-value=1.9e-14 Score=158.32 Aligned_cols=329 Identities=12% Similarity=0.055 Sum_probs=242.0
Q ss_pred hhhhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCC
Q 043388 10 EEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISS 89 (854)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 89 (854)
..|.++++|+.+.|..+ ++.+-..+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+...+|.+...
T Consensus 65 ~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~ 141 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDF 141 (394)
T ss_dssp TTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCC
T ss_pred HHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccc
Confidence 46889999999999754 77566778999999999999865 77677889999999999998876 55588889988876
Q ss_pred CceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCccc
Q 043388 90 LEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGK 169 (854)
Q Consensus 90 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~ 169 (854)
++....... . .+...+|.++++|+.+.+..+ +..+ -...|.++++|+.+++..| ++.+
T Consensus 142 ~~~~~~~~~--~-~i~~~aF~~c~~L~~i~l~~~-~~~I-----------------~~~~F~~c~~L~~i~l~~~-~~~I 199 (394)
T 4fs7_A 142 KEITIPEGV--T-VIGDEAFATCESLEYVSLPDS-METL-----------------HNGLFSGCGKLKSIKLPRN-LKII 199 (394)
T ss_dssp SEEECCTTC--C-EECTTTTTTCTTCCEEECCTT-CCEE-----------------CTTTTTTCTTCCBCCCCTT-CCEE
T ss_pred cccccCccc--c-ccchhhhcccCCCcEEecCCc-ccee-----------------ccccccCCCCceEEEcCCC-ceEe
Confidence 555444333 3 677788999999998888543 2222 1356888999999999877 7778
Q ss_pred CCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccC
Q 043388 170 VSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTI 249 (854)
Q Consensus 170 ~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~ 249 (854)
...+|.+...|+.+.+..+..... . .+....+|+.+.+..+- +......+.... .++.+.+..+..+ +.
T Consensus 200 ~~~~F~~~~~L~~i~~~~~~~~i~-~-------~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~-~l~~~~~~~~~~~-i~ 268 (394)
T 4fs7_A 200 RDYCFAECILLENMEFPNSLYYLG-D-------FALSKTGVKNIIIPDSF-TELGKSVFYGCT-DLESISIQNNKLR-IG 268 (394)
T ss_dssp CTTTTTTCTTCCBCCCCTTCCEEC-T-------TTTTTCCCCEEEECTTC-CEECSSTTTTCS-SCCEEEECCTTCE-EC
T ss_pred CchhhccccccceeecCCCceEee-h-------hhcccCCCceEEECCCc-eecccccccccc-cceeEEcCCCcce-ee
Confidence 888999999999998887654321 1 23455788888886543 323344455544 7888888877655 77
Q ss_pred CccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCC
Q 043388 250 PSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQ 329 (854)
Q Consensus 250 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 329 (854)
...|..+..++.+.+..+.+ ...+|..+.+|+.+.+.++ ++.+...+|.++++|+.++|..+ ++.+...+|.++.
T Consensus 269 ~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~ 343 (394)
T 4fs7_A 269 GSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCT 343 (394)
T ss_dssp SCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCT
T ss_pred ccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCC
Confidence 78888889999888877654 3457888899999988765 66567778999999999999755 6667778899999
Q ss_pred CCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCC
Q 043388 330 NLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMK 409 (854)
Q Consensus 330 ~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 409 (854)
+|+.+++..| ++ .++.. .|.+ |.+|+.+++..+ ++ .+..+|.+++
T Consensus 344 ~L~~i~lp~~-l~-~I~~~------------------------aF~~-------C~~L~~i~lp~~-~~-~~~~~F~~c~ 388 (394)
T 4fs7_A 344 SLSNINFPLS-LR-KIGAN------------------------AFQG-------CINLKKVELPKR-LE-QYRYDFEDTT 388 (394)
T ss_dssp TCCEECCCTT-CC-EECTT------------------------TBTT-------CTTCCEEEEEGG-GG-GGGGGBCTTC
T ss_pred CCCEEEECcc-cc-EehHH------------------------HhhC-------CCCCCEEEECCC-CE-EhhheecCCC
Confidence 9999888766 44 22221 2222 667888888755 33 3346777777
Q ss_pred CCCEE
Q 043388 410 SIKEL 414 (854)
Q Consensus 410 ~L~~L 414 (854)
+|+.+
T Consensus 389 ~L~~I 393 (394)
T 4fs7_A 389 KFKWI 393 (394)
T ss_dssp EEEEE
T ss_pred CCcEE
Confidence 77654
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=6.6e-16 Score=149.11 Aligned_cols=135 Identities=18% Similarity=0.154 Sum_probs=115.2
Q ss_pred hhhcCCCCCEEecccccccccCCccccCcC-CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCC
Q 043388 11 EIGSLLNLQTLAIDFNYLTGQLPDFVGNLS-ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISS 89 (854)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 89 (854)
.+.++.+|++|+|++|.++ .+|. +..+. +|+.|+|++|.|++. ..|..+++|++|+|++|+|+++.+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4677899999999999999 4565 55554 999999999999965 78999999999999999999877777899999
Q ss_pred CceeeecccccccccCc-ccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCcc----ccCCCCCCEEecCCC
Q 043388 90 LEFIYLTVNRFSGSLPF-DILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDS----LSNASNLERLDLSGN 164 (854)
Q Consensus 90 L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~----~~~l~~L~~L~Ls~N 164 (854)
|++|+|++|+|+ .+|. ..|..+++|+.|++++|.+.. +|.. +..+++|++||+++|
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~------------------~~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN------------------KKHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG------------------STTHHHHHHHHCTTCSEETTEEC
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC------------------cHhHHHHHHHHCCccceeCCCcC
Confidence 999999999997 7775 467788888888887777643 3554 889999999999999
Q ss_pred cCcc
Q 043388 165 QFKG 168 (854)
Q Consensus 165 ~i~~ 168 (854)
.+..
T Consensus 151 ~~~~ 154 (176)
T 1a9n_A 151 KLKE 154 (176)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 8864
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=2.6e-17 Score=162.46 Aligned_cols=157 Identities=23% Similarity=0.257 Sum_probs=123.3
Q ss_pred hhhcCCCCCEEecccccccccCCc------cccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhh
Q 043388 11 EIGSLLNLQTLAIDFNYLTGQLPD------FVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWI 84 (854)
Q Consensus 11 ~~~~l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 84 (854)
.+.....++.++++.+.+++.+|. .|+.+++|++|+|++|++++ +| .|..+++|++|+|++|+|+ .+|..+
T Consensus 13 ~~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 13 IFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHH
T ss_pred HHHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchh
Confidence 367788999999999999988887 88999999999999999985 66 8899999999999999998 577788
Q ss_pred cCCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCC
Q 043388 85 CNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGN 164 (854)
Q Consensus 85 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N 164 (854)
..+++|++|+|++|+|+ .+| .|..+++|++|++++|+++.+. ....+..+++|++|++++|
T Consensus 90 ~~~~~L~~L~L~~N~l~-~l~--~~~~l~~L~~L~l~~N~i~~~~----------------~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 90 AVADTLEELWISYNQIA-SLS--GIEKLVNLRVLYMSNNKITNWG----------------EIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHHHHCSEEEEEEEECC-CHH--HHHHHHHSSEEEESEEECCCHH----------------HHHHHTTTTTCSEEEECSC
T ss_pred hcCCcCCEEECcCCcCC-cCC--ccccCCCCCEEECCCCcCCchh----------------HHHHHhcCCCCCEEEecCC
Confidence 88899999999999998 566 3667777777777777665431 0136778888888888888
Q ss_pred cCcccCCcC----------ccccCCCCeEeccccccc
Q 043388 165 QFKGKVSID----------FSSLKNLWWLNLEQNNLG 191 (854)
Q Consensus 165 ~i~~~~~~~----------f~~l~~L~~L~L~~N~l~ 191 (854)
++++..|.. +..+++|+.|| +|.++
T Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 151 PLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 887765543 66666666665 55554
No 394
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=2.3e-15 Score=140.98 Aligned_cols=128 Identities=21% Similarity=0.246 Sum_probs=92.2
Q ss_pred CCCCCEEecCCCcCc-ccCCcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhh
Q 043388 153 ASNLERLDLSGNQFK-GKVSIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANL 231 (854)
Q Consensus 153 l~~L~~L~Ls~N~i~-~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 231 (854)
.++|++|++++|+++ +..|..|..+++|++|++++|.++.+ ..+..+++|++|+|++|.+++.+|..+..+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 87 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--------ANLPKLNKLKKLELSDNRVSGGLEVLAEKC 87 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--------TTCCCCTTCCEEECCSSCCCSCTHHHHHHC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--------hhhhcCCCCCEEECCCCcccchHHHHhhhC
Confidence 367888888888887 56666778888888888888888755 246778888888888888886566666555
Q ss_pred cccccEEEccCCccccc-CCccccccccCCeeeccccccccCCC---CCccCcccCceeeCc
Q 043388 232 SSTMIQFRIGGNQISGT-IPSGIRNLVNLIALTIEVNQLHGIIP---DGVGELQHLQQLYMF 289 (854)
Q Consensus 232 ~~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 289 (854)
+ .|+.|++++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 88 ~-~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 88 P-NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp T-TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred C-CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4 677777777777753 23667777777777777777776555 456667777777665
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.53 E-value=2.7e-14 Score=136.64 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=97.5
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
..++|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 5689999999999 6887764 899999999999998889999999999999999999999888899999999999999
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCC
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLK 126 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 126 (854)
+|+|+ .+|.+.|.++++|++|+|++|.+.
T Consensus 87 ~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 87 DNQLK-SIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccC-EeCHHHhcCCCCCCEEEeCCCCCC
Confidence 99999 899889999999999998888765
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=1.7e-16 Score=156.60 Aligned_cols=156 Identities=22% Similarity=0.272 Sum_probs=113.8
Q ss_pred ccccccCCeeeccccccccCCCC------CccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCc
Q 043388 253 IRNLVNLIALTIEVNQLHGIIPD------GVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLG 326 (854)
Q Consensus 253 ~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 326 (854)
+.....++.++++.|.+++..|. .|..+++|++|++++|.+++ +| .+..+++|+.|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44455667777777777776665 67777788888888888775 55 7777788888888888887 5666667
Q ss_pred CCCCCcccccCCCcccCccchhhcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCC-ccc
Q 043388 327 NCQNLKGFDASHNKLTGAIPQQVLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIP-FSL 405 (854)
Q Consensus 327 ~l~~L~~L~ls~N~l~~~~p~~~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p-~~~ 405 (854)
.+++|+.|++++|++++ +| .+ +. +.+|++|+|++|++++..+ ..+
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~-------------------------~~-------l~~L~~L~l~~N~i~~~~~~~~l 136 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GI-------------------------EK-------LVNLRVLYMSNNKITNWGEIDKL 136 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HH-------------------------HH-------HHHSSEEEESEEECCCHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-cc-------------------------cc-------CCCCCEEECCCCcCCchhHHHHH
Confidence 77788888888888773 33 11 11 3458888888888885433 467
Q ss_pred ccCCCCCEEEccCcccccccch----------hhcCccCCCeeecccccCcc
Q 043388 406 GFMKSIKELNVSSNNLSGQIPE----------FLQNLSFLEFLNLSYNHLEG 447 (854)
Q Consensus 406 ~~l~~L~~L~Ls~N~l~~~~p~----------~~~~l~~L~~L~ls~N~l~~ 447 (854)
..+++|++|++++|.+++.+|. .+..+++|+.|| +|+++.
T Consensus 137 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 137 AALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp TTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred hcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 8888999999999999877665 378889999887 777654
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=5.2e-14 Score=135.09 Aligned_cols=106 Identities=19% Similarity=0.203 Sum_probs=97.0
Q ss_pred CCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 17 NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 17 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
.-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 13 ~~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 13 DQTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp CSSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 3478999999998 7888775 899999999999998889999999999999999999998888889999999999999
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCC
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLK 126 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 126 (854)
+|+|+ .+|...|..+++|++|++++|.+.
T Consensus 90 ~N~l~-~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 90 DNHLK-SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SSCCC-CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCccc-eeCHHHhccccCCCEEEeCCCCcc
Confidence 99999 899888999999999998888765
No 398
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.49 E-value=1.5e-12 Score=142.98 Aligned_cols=329 Identities=13% Similarity=0.109 Sum_probs=159.0
Q ss_pred cccCc-CCCCeeecccccccccCCcCccCCCCCcEEeccccc---CcccChhhhcCCCCCceeeecccccccccCccccc
Q 043388 35 FVGNL-SALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQ---FSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILV 110 (854)
Q Consensus 35 ~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 110 (854)
+|.+. ..|+.+.+-.+ ++.+-..+|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++ .++..+|.
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I~~~aF~ 134 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EIDSEAFH 134 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EECTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-eehhhhhh
Confidence 44443 23555555432 444445555555555555555442 44444455555555555554433 33 44555555
Q ss_pred CCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccc
Q 043388 111 NLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNL 190 (854)
Q Consensus 111 ~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l 190 (854)
++.+|+.+.+..+ +..+ -...|..+.+|+.+.+..+ ++.+...+|.. .+|+.+.+..+-.
T Consensus 135 ~c~~L~~i~lp~~-~~~I-----------------~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~ 194 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSV-----------------ADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT 194 (394)
T ss_dssp TCTTCCEEECCTT-CCEE-----------------CTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC
T ss_pred hhcccccccccce-eeee-----------------cccceecccccccccccce-eeEeccccccc-cceeEEEECCccc
Confidence 5555555544311 1111 1234555555666655543 44455555543 3455555544322
Q ss_pred cCCCCCChhhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccccc
Q 043388 191 GMGTANDLDFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQLH 270 (854)
Q Consensus 191 ~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 270 (854)
. +.. .+|.++.+++......+... .+...+.... .........+.....+..+.+. +.++
T Consensus 195 ~-i~~------~af~~c~~l~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ip-~~v~ 254 (394)
T 4gt6_A 195 R-IGT------NAFSECFALSTITSDSESYP-AIDNVLYEKS-----------ANGDYALIRYPSQREDPAFKIP-NGVA 254 (394)
T ss_dssp E-ECT------TTTTTCTTCCEEEECCSSSC-BSSSCEEEEC-----------TTSCEEEEECCTTCCCSEEECC-TTEE
T ss_pred c-ccc------chhhhccccceecccccccc-cccceeeccc-----------ccccccccccccccccceEEcC-Ccce
Confidence 1 111 14555555555555444433 1111111100 0000000011122233334333 2344
Q ss_pred cCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchhhc
Q 043388 271 GIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQVL 350 (854)
Q Consensus 271 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 350 (854)
.+...+|.++.+|+.+.+.++... +...+|.+++.|+.+.+. +.++.+...+|.++.+|+.+++..+ ++ .+..
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~--- 327 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILD--- 327 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECT---
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehH---
Confidence 455667777777777777655444 556667777777777775 3455455667777777777776543 32 1111
Q ss_pred chhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchhhc
Q 043388 351 SITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQ 430 (854)
Q Consensus 351 ~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 430 (854)
..|.+ |.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..+.
T Consensus 328 ---------------------~aF~~-------C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~ 375 (394)
T 4gt6_A 328 ---------------------DAFAG-------CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAIS 375 (394)
T ss_dssp ---------------------TTTTT-------CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCB
T ss_pred ---------------------hHhhC-------CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhh
Confidence 12222 556777777544 554556677788888888887776541 4566
Q ss_pred CccCCCeeecccccC
Q 043388 431 NLSFLEFLNLSYNHL 445 (854)
Q Consensus 431 ~l~~L~~L~ls~N~l 445 (854)
.+.+|+.+.+..|.+
T Consensus 376 ~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 376 TDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCCCC----------
T ss_pred ccCCCCEEEeCCCCE
Confidence 667777777766654
No 399
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.5e-13 Score=131.45 Aligned_cols=109 Identities=21% Similarity=0.251 Sum_probs=95.8
Q ss_pred CCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEc
Q 043388 41 ALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 41 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
..+++++++|+++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|.++|.++++|++|+|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L 85 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLT-VLPAGVFDKLTQLTQLSL 85 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcC-ccChhhccCCCCCCEEEC
Confidence 4679999999999 5777664 89999999999999999999999999999999999999 899999999999999999
Q ss_pred ccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccC
Q 043388 121 TFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKV 170 (854)
Q Consensus 121 ~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~ 170 (854)
++|+++.+ .+..|.++++|++|+|++|.++...
T Consensus 86 ~~N~l~~~-----------------~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 86 NDNQLKSI-----------------PRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CSSCCCCC-----------------CTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCCccCEe-----------------CHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 88887644 2456889999999999999987543
No 400
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.1e-13 Score=130.88 Aligned_cols=107 Identities=19% Similarity=0.303 Sum_probs=94.3
Q ss_pred CCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcc
Q 043388 42 LGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLT 121 (854)
Q Consensus 42 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~ 121 (854)
-+.+++++|+++ .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+ .+|..+|.++++|++|+|+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCC-ccChhHhCCcchhhEEECC
Confidence 478999999998 7787775 89999999999999999999999999999999999999 8999999999999999988
Q ss_pred cCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCccc
Q 043388 122 FCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGK 169 (854)
Q Consensus 122 ~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~ 169 (854)
+|+++.+ .+..|.++++|++|+|++|.+...
T Consensus 90 ~N~l~~l-----------------~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 90 DNHLKSI-----------------PRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SSCCCCC-----------------CTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CCcccee-----------------CHHHhccccCCCEEEeCCCCcccc
Confidence 8877644 234588999999999999998744
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.43 E-value=2.7e-12 Score=141.05 Aligned_cols=302 Identities=10% Similarity=0.080 Sum_probs=188.0
Q ss_pred hhhhcCC-CCCEEecccccccccCCccccCcCCCCeeeccccc---ccccCCcCccCCCCCcEEecccccCcccChhhhc
Q 043388 10 EEIGSLL-NLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNS---LGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWIC 85 (854)
Q Consensus 10 ~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~---l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 85 (854)
..|.+++ .|+.+.+-.+ ++.+-..+|.++++|+.+.+..|. ++.+-..+|..+.+|+.+.+..+ ++.+...+|.
T Consensus 57 ~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 57 RVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhh
Confidence 4677774 5999999765 775677899999999999999874 77777889999999999999876 6668888999
Q ss_pred CCCCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCc
Q 043388 86 NISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQ 165 (854)
Q Consensus 86 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~ 165 (854)
++.+|+.+.+..+ ++ .++...|.+..+|+.+.+..+ ++.+. ..+|. ..+|+.+.+..+-
T Consensus 135 ~c~~L~~i~lp~~-~~-~I~~~~F~~c~~L~~i~~~~~-~~~I~-----------------~~aF~-~~~l~~i~ip~~~ 193 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VT-SVADGMFSYCYSLHTVTLPDS-VTAIE-----------------ERAFT-GTALTQIHIPAKV 193 (394)
T ss_dssp TCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CCEEC-----------------TTTTT-TCCCSEEEECTTC
T ss_pred hhcccccccccce-ee-eecccceecccccccccccce-eeEec-----------------ccccc-ccceeEEEECCcc
Confidence 9999999999865 44 788999999999999988643 32221 12333 2567777776543
Q ss_pred CcccCCcCccccCCCCeEecccccccCCCCCChh-------hhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEE
Q 043388 166 FKGKVSIDFSSLKNLWWLNLEQNNLGMGTANDLD-------FVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQF 238 (854)
Q Consensus 166 i~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~-------~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L 238 (854)
+.+...+|....+|.......+....+....+. ....+.....+..+.+.. .++.....+|.... .|+.+
T Consensus 194 -~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~-~L~~i 270 (394)
T 4gt6_A 194 -TRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCA-YLASV 270 (394)
T ss_dssp -CEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCS-SCCEE
T ss_pred -cccccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecc-cccEE
Confidence 335666677777777666655544322211000 000011122233333321 12212233344433 45555
Q ss_pred EccCCcccccCCccccccccCCeeeccccccccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceec
Q 043388 239 RIGGNQISGTIPSGIRNLVNLIALTIEVNQLHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQ 318 (854)
Q Consensus 239 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 318 (854)
.+..+..+ +...+|.++++|+.+.+. +.++.+...+|.++.+|+.+.+..+ ++.+...+|.++++|+.+.+..+ ++
T Consensus 271 ~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~ 346 (394)
T 4gt6_A 271 KMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT 346 (394)
T ss_dssp ECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC
T ss_pred ecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC
Confidence 55544333 555566666666666664 3455555566666666666666544 44455556666666666666543 44
Q ss_pred ccCCCCCcCCCCCcccccCCCcc
Q 043388 319 GNIPSSLGNCQNLKGFDASHNKL 341 (854)
Q Consensus 319 ~~~~~~~~~l~~L~~L~ls~N~l 341 (854)
.+...+|.+|++|+.+++.+|..
T Consensus 347 ~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 347 KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp BCCGGGGTTCTTCCEEEESSCHH
T ss_pred EEhHhHhhCCCCCCEEEECCcee
Confidence 44455666666666666666543
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=6.5e-15 Score=159.52 Aligned_cols=175 Identities=17% Similarity=0.154 Sum_probs=90.1
Q ss_pred CCCcEEecccccCcccChhhhcCC-----CCCceeeecccccccccCcccccCCCCCcEEEcccCCCCCCceeeccCccC
Q 043388 64 RNLVYLNVAENQFSGMFPRWICNI-----SSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLTFCSLKNLWWLNLEQNNL 138 (854)
Q Consensus 64 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l 138 (854)
+.|++|+|++|.|+......|... ++|++|+|++|.|++.-...++..+++|++|+|++|.+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~------------ 139 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLG------------ 139 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCC------------
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCC------------
Confidence 556677777776664443333322 566777777776652222222233344444444444332
Q ss_pred CCCCCCCCCccc-cCCCCCCEEecCCCcCcccC----CcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEE
Q 043388 139 GMGTASSIPDSL-SNASNLERLDLSGNQFKGKV----SIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKAL 213 (854)
Q Consensus 139 ~~~~~~~~p~~~-~~l~~L~~L~Ls~N~i~~~~----~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L 213 (854)
......+...+ ...++|++|+|++|+|+... +..+...++|++|+|++|.|+..... .+...+..+++|++|
T Consensus 140 -~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--~L~~~L~~~~~L~~L 216 (372)
T 3un9_A 140 -PEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--LLAAQLDRNRQLQEL 216 (372)
T ss_dssp -HHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--HHHHHGGGCSCCCEE
T ss_pred -HHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--HHHHHHhcCCCcCeE
Confidence 11111122222 23566777777777665432 22335566677777777766532211 233455666677777
Q ss_pred EcccCcCcccCChh----hhhhcccccEEEccCCcccccCCcccc
Q 043388 214 SLCDNQFGGELPHS----IANLSSTMIQFRIGGNQISGTIPSGIR 254 (854)
Q Consensus 214 ~L~~N~l~~~~p~~----~~~l~~~L~~L~l~~N~l~~~~~~~~~ 254 (854)
+|++|.|+...... +...+ .|+.|+|++|.|+......+.
T Consensus 217 ~Ls~N~i~~~g~~~l~~~L~~~~-~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 217 NVAYNGAGDTAALALARAAREHP-SLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp ECCSSCCCHHHHHHHHHHHHHCS-SCCEEECTTSSCCHHHHHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHhCC-CCCEEeccCCCCCHHHHHHHH
Confidence 77777776432222 22233 577777777777654444443
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.34 E-value=2.1e-14 Score=155.58 Aligned_cols=189 Identities=14% Similarity=0.056 Sum_probs=124.2
Q ss_pred CCCCEEecccccccccCCccccCc-----CCCCeeecccccccccCCcC-ccCCCCCcEEecccccCcccChhhhc----
Q 043388 16 LNLQTLAIDFNYLTGQLPDFVGNL-----SALGMLLIRWNSLGGQIPTT-LGLLRNLVYLNVAENQFSGMFPRWIC---- 85 (854)
Q Consensus 16 ~~L~~L~L~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~---- 85 (854)
++|++|+|++|.|+......+... ++|++|+|++|.|+...... ...+++|++|+|++|.|++.....++
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 578999999999875544444333 68999999999987543333 34567899999999999865555553
Q ss_pred -CCCCCceeeecccccccccCcc----cccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEe
Q 043388 86 -NISSLEFIYLTVNRFSGSLPFD----ILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLD 160 (854)
Q Consensus 86 -~l~~L~~L~L~~N~l~~~~~~~----~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~ 160 (854)
..++|++|+|++|.|+ ..... .+..+++|++|+|++|.+. ..++..++..+...++|++|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~-~~~~~~l~~~L~~~~~L~~L~Ls~N~l~-------------~~g~~~L~~~L~~~~~L~~L~ 217 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLT-AAGVAVLMEGLAGNTSVTHLSLLHTGLG-------------DEGLELLAAQLDRNRQLQELN 217 (372)
T ss_dssp STTCCCCEEECCSSCCH-HHHHHHHHHHHHTCSSCCEEECTTSSCH-------------HHHHHHHHHHGGGCSCCCEEE
T ss_pred hcCCccceeeCCCCCCC-hHHHHHHHHHHhcCCCcCEEeCCCCCCC-------------cHHHHHHHHHHhcCCCcCeEE
Confidence 4678999999999886 32211 2345566666666555543 323344567788889999999
Q ss_pred cCCCcCcccCC----cCccccCCCCeEecccccccCCCCCChhhhhhccCCCC--CcEEE--cccCcCc
Q 043388 161 LSGNQFKGKVS----IDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSS--LKALS--LCDNQFG 221 (854)
Q Consensus 161 Ls~N~i~~~~~----~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~--L~~L~--L~~N~l~ 221 (854)
|++|+|+.... ..+...++|++|+|++|.|+...... ...+..... |+.+. +..|.+.
T Consensus 218 Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~---L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 218 VAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQV---LRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp CCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHH---HHHCC------CEEECCCC----CH
T ss_pred CCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHH---HHHHhcCCCccchhhHhhhcCCccC
Confidence 99999986543 34456789999999999987543321 112222232 77887 7777776
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2.2e-12 Score=139.29 Aligned_cols=104 Identities=22% Similarity=0.187 Sum_probs=93.9
Q ss_pred CEEecccc-cccccCCccccCcCCCCeeeccc-ccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeec
Q 043388 19 QTLAIDFN-YLTGQLPDFVGNLSALGMLLIRW-NSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLT 96 (854)
Q Consensus 19 ~~L~L~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 96 (854)
..++++++ +|+ .+|. ++.+++|+.|+|++ |+|+++.+..|+.+++|++|+|++|+|+++.|.+|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 46799998 899 5888 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred ccccccccCcccccCCCCCcEEEcccCCCC
Q 043388 97 VNRFSGSLPFDILVNLPNLKELYLTFCSLK 126 (854)
Q Consensus 97 ~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 126 (854)
+|+|+ .+|...|..++ |+.|+|.+|.+.
T Consensus 89 ~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALE-SLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCS-CCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccc-eeCHHHcccCC-ceEEEeeCCCcc
Confidence 99999 89988888776 888777777665
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.28 E-value=2.3e-10 Score=124.94 Aligned_cols=101 Identities=7% Similarity=-0.056 Sum_probs=70.2
Q ss_pred hhcCCCCCEEecccccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCc
Q 043388 12 IGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLE 91 (854)
Q Consensus 12 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 91 (854)
+....+|+.+.+.. .++.+...+|.++.+|+.+.|..+ ++.+-..+|.+. +|+.+.+..+ ++.+...+|.+. +|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-Ccc
Confidence 55667888888864 466455668888889999988754 766777788876 6888877655 665677777764 788
Q ss_pred eeeecccccccccCcccccCCCCCcEEEc
Q 043388 92 FIYLTVNRFSGSLPFDILVNLPNLKELYL 120 (854)
Q Consensus 92 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~l 120 (854)
.+.+..+ ++ .+...+|.+. +|+.+.+
T Consensus 117 ~i~lp~~-~~-~i~~~~F~~~-~l~~~~~ 142 (379)
T 4h09_A 117 DFEFPGA-TT-EIGNYIFYNS-SVKRIVI 142 (379)
T ss_dssp EEECCTT-CC-EECTTTTTTC-CCCEEEE
T ss_pred cccCCCc-cc-cccccccccc-eeeeeec
Confidence 8888765 33 5666666654 3444443
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=5.8e-12 Score=135.97 Aligned_cols=97 Identities=21% Similarity=0.165 Sum_probs=90.0
Q ss_pred CcccccCchhhhcCCCCCEEeccc-ccccccCCccccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccC
Q 043388 2 NKLEGQIPEEIGSLLNLQTLAIDF-NYLTGQLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMF 80 (854)
Q Consensus 2 n~~~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 80 (854)
|+|+ .+|. |..+++|++|+|++ |.|++..+..|+.+++|+.|+|++|+|+++.|..|..+++|++|+|++|+|+++.
T Consensus 19 n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 96 (347)
T 2ifg_A 19 GALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLS 96 (347)
T ss_dssp CCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCC
T ss_pred CCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeC
Confidence 3677 4888 99999999999996 9999877789999999999999999999999999999999999999999999888
Q ss_pred hhhhcCCCCCceeeecccccc
Q 043388 81 PRWICNISSLEFIYLTVNRFS 101 (854)
Q Consensus 81 p~~~~~l~~L~~L~L~~N~l~ 101 (854)
+..|..++ |++|+|++|.+.
T Consensus 97 ~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 97 WKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp STTTCSCC-CCEEECCSSCCC
T ss_pred HHHcccCC-ceEEEeeCCCcc
Confidence 88888877 999999999997
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=1.9e-11 Score=126.18 Aligned_cols=147 Identities=17% Similarity=0.146 Sum_probs=112.4
Q ss_pred HHHHHHhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCC
Q 043388 542 ELSKATSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSK 620 (854)
Q Consensus 542 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 620 (854)
.+......|++...++.|+.+.||++... +..+++|+...........+.+|+++++.+. +..+.++++++...+
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~-- 83 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG-- 83 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT--
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC--
Confidence 34566778988899999999999999754 5679999987532233356889999999994 677889998876543
Q ss_pred CCceeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC------------------------
Q 043388 621 GADFKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------------------------ 676 (854)
Q Consensus 621 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~------------------------ 676 (854)
..|+||||++|.++.+.+... .+...++.+++++|+.||+..
T Consensus 84 ---~~~lv~e~i~G~~l~~~~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (263)
T 3tm0_A 84 ---WSNLLMSEADGVLCSEEYEDE-----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNND 149 (263)
T ss_dssp ---EEEEEEECCSSEEHHHHCCTT-----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTT
T ss_pred ---ceEEEEEecCCeehhhccCCc-----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcc
Confidence 679999999999998763211 123468889999999999810
Q ss_pred --------------------------------CCCeEeecCCCCceEecCCccc-cccccccc
Q 043388 677 --------------------------------QPPIVHGDLKPSNVLLDHDMVA-HQNFSLSH 706 (854)
Q Consensus 677 --------------------------------~~~ivH~Dlkp~NIll~~~~~~-~~Dfg~~~ 706 (854)
.+.++|+|++|.||+++.+.+. +|||+.+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 150 LADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1359999999999999877654 66998653
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.16 E-value=1.4e-09 Score=118.77 Aligned_cols=310 Identities=11% Similarity=0.092 Sum_probs=170.9
Q ss_pred cccCcCCCCeeecccccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccccccccCcccccCCCC
Q 043388 35 FVGNLSALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPN 114 (854)
Q Consensus 35 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 114 (854)
++....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+...+|.++ +|+.+.+..+ ++ .++..+|.+. +
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~~-~ 114 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQGT-D 114 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTTC-C
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-ee-EeccceeccC-C
Confidence 355566788777764 466666778888888888888654 666777788776 6777777644 55 6777777654 6
Q ss_pred CcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEecccccccCCC
Q 043388 115 LKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLGMGT 194 (854)
Q Consensus 115 L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~~~~ 194 (854)
|+.+.+..+ +..+ -...|.+ .+|+.+.+-.+ ++.+....|....+++.+.+..+......
T Consensus 115 L~~i~lp~~-~~~i-----------------~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~ 174 (379)
T 4h09_A 115 LDDFEFPGA-TTEI-----------------GNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVA 174 (379)
T ss_dssp CSEEECCTT-CCEE-----------------CTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEE
T ss_pred cccccCCCc-cccc-----------------ccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeec
Confidence 776666432 1111 0122333 35555555443 45566667777777777766655432211
Q ss_pred CCCh------hhhhhccCCCCCcEEEcccCcCcccCChhhhhhcccccEEEccCCcccccCCccccccccCCeeeccccc
Q 043388 195 ANDL------DFVTLLTNCSSLKALSLCDNQFGGELPHSIANLSSTMIQFRIGGNQISGTIPSGIRNLVNLIALTIEVNQ 268 (854)
Q Consensus 195 ~~~~------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 268 (854)
.... .....+..+.++. .+.+..+. .......+....+|+.+.+..+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~- 227 (379)
T 4h09_A 175 ENYVLYNKNKTILESYPAAKTGT-------------------------EFTIPSTV-KTVTAYGFSYGKNLKKITITSG- 227 (379)
T ss_dssp ETTEEEETTSSEEEECCTTCCCS-------------------------EEECCTTC-CEECTTTTTTCSSCSEEECCTT-
T ss_pred ccceecccccceecccccccccc-------------------------ccccccce-eEEeecccccccccceeeeccc-
Confidence 1100 0001112222222 22222221 2234445555666666666443
Q ss_pred cccCCCCCccCcccCceeeCccccccccCCccccCccccchhccccceecccCCCCCcCCCCCcccccCCCcccCccchh
Q 043388 269 LHGIIPDGVGELQHLQQLYMFRNFLQGSIPPSLGNLTKLADLALSFNNLQGNIPSSLGNCQNLKGFDASHNKLTGAIPQQ 348 (854)
Q Consensus 269 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~ 348 (854)
+..+...+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +......+|.++.+|+.+.+.++.++ .++..
T Consensus 228 ~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~ 304 (379)
T 4h09_A 228 VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPR 304 (379)
T ss_dssp CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTT
T ss_pred eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhh
Confidence 33355556666666666666554 44455556666666666666543 44345556666666766666665554 22221
Q ss_pred hcchhhhHHHHHhhcCCCCCCcCccccccccccccccccceeeccCcccccCCCcccccCCCCCEEEccCcccccccchh
Q 043388 349 VLSITTLSVYLALAHNLLNDSLPLQVGNLKNLVITCVSLEYLDISSNSFHGVIPFSLGFMKSIKELNVSSNNLSGQIPEF 428 (854)
Q Consensus 349 ~~~~~~l~~~l~l~~n~l~~~~p~~~~~l~~l~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 428 (854)
.|.+ |.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++..-..+
T Consensus 305 ------------------------aF~~-------c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~a 351 (379)
T 4h09_A 305 ------------------------VFMD-------CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGA 351 (379)
T ss_dssp ------------------------TTTT-------CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred ------------------------hhcC-------CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhH
Confidence 1112 445666666543 55455567777777777777554 55444556
Q ss_pred hcCcc
Q 043388 429 LQNLS 433 (854)
Q Consensus 429 ~~~l~ 433 (854)
|.+++
T Consensus 352 F~~c~ 356 (379)
T 4h09_A 352 FEGSS 356 (379)
T ss_dssp TTTSS
T ss_pred hhCCC
Confidence 66654
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.05 E-value=2.6e-10 Score=117.56 Aligned_cols=137 Identities=13% Similarity=0.088 Sum_probs=97.3
Q ss_pred HhhccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCC--eeeEEEEeeccCCCCCce
Q 043388 547 TSEFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN--LIKIITICSSIDSKGADF 624 (854)
Q Consensus 547 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~ 624 (854)
..+|.+....+.|..+.||++... +|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++....+ .
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~-----~ 89 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG-----R 89 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-----C
T ss_pred cCCCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC-----C
Confidence 345555444456667999999764 5677999987543 2345788999999996544 556888765433 5
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC----------------------------
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC---------------------------- 676 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~---------------------------- 676 (854)
.++||||++|.++. ... .+ ...++.++++.|+.||+..
T Consensus 90 ~~~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (264)
T 1nd4_A 90 DWLLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQ 155 (264)
T ss_dssp EEEEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCT
T ss_pred CEEEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccc
Confidence 79999999998884 211 11 1256778888888888752
Q ss_pred ---------------------------CCCeEeecCCCCceEecCCccc-cccccccc
Q 043388 677 ---------------------------QPPIVHGDLKPSNVLLDHDMVA-HQNFSLSH 706 (854)
Q Consensus 677 ---------------------------~~~ivH~Dlkp~NIll~~~~~~-~~Dfg~~~ 706 (854)
++.++|+|++|+||+++.+.+. ++||+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 156 DDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887765 66998764
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=1.7e-10 Score=123.66 Aligned_cols=67 Identities=18% Similarity=0.130 Sum_probs=29.8
Q ss_pred CCCCCEEecCCCcCcccCCcCcc---ccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccCcCc
Q 043388 153 ASNLERLDLSGNQFKGKVSIDFS---SLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFG 221 (854)
Q Consensus 153 l~~L~~L~Ls~N~i~~~~~~~f~---~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 221 (854)
+++|++|+|++|++....+..+. .+++|++|+|+.|.|+..... .+...+..+++|+.|+|++|.++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~--~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR--LLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH--HHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH--HHHhhcccCCcceEEECCCCcCC
Confidence 45666666666665532222221 345555555555555422111 11111233445555555555544
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=2.7e-10 Score=122.09 Aligned_cols=182 Identities=19% Similarity=0.191 Sum_probs=117.2
Q ss_pred chhhhcCCCCCEEeccccccc---------ccCCccccCcCCCCeeeccccc-ccccCCcCccCCCCCcEEecccccCcc
Q 043388 9 PEEIGSLLNLQTLAIDFNYLT---------GQLPDFVGNLSALGMLLIRWNS-LGGQIPTTLGLLRNLVYLNVAENQFSG 78 (854)
Q Consensus 9 p~~~~~l~~L~~L~L~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 78 (854)
.+++..+++|+.|.+..+... +.++..+..+++|+.|+|++|. +. ++. +. +++|++|+|..|.++.
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCCh
Confidence 445677889999999765431 1244456777899999999884 33 333 43 8999999999999875
Q ss_pred cChhhhc--CCCCCceeeecc--cccccccCc----ccc--cCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCc
Q 043388 79 MFPRWIC--NISSLEFIYLTV--NRFSGSLPF----DIL--VNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPD 148 (854)
Q Consensus 79 ~~p~~~~--~l~~L~~L~L~~--N~l~~~~~~----~~~--~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~ 148 (854)
.....+. .+++|++|+|+. |...+.... ..+ ..+|+|++|++..|.+..- .+.
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~-----------------~~~ 270 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNV-----------------VVE 270 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHH-----------------HHH
T ss_pred HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchH-----------------HHH
Confidence 5445555 789999999864 222111100 112 2356666666665554310 111
Q ss_pred cc---cCCCCCCEEecCCCcCcccC----CcCccccCCCCeEecccccccCCCCCChhhhhhccC-CCCCcEEEcccCc
Q 043388 149 SL---SNASNLERLDLSGNQFKGKV----SIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTN-CSSLKALSLCDNQ 219 (854)
Q Consensus 149 ~~---~~l~~L~~L~Ls~N~i~~~~----~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~-l~~L~~L~L~~N~ 219 (854)
.+ ..+++|++|+|+.|+|.... +..+..+++|+.|+|++|.|+.... .++.. + ...+++++|+
T Consensus 271 ~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~------~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK------KELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH------HHHHHHC--CSEEECCSBC
T ss_pred HHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHH------HHHHHHc--CCEEEecCCc
Confidence 11 24789999999999998643 3344567999999999998864222 12222 2 4568999887
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=5e-10 Score=118.14 Aligned_cols=191 Identities=16% Similarity=0.124 Sum_probs=121.3
Q ss_pred cCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhc-cCCC--eeeEEEEeeccCCCCCceeeEEE
Q 043388 553 SNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNI-RHRN--LIKIITICSSIDSKGADFKALVF 629 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--iv~~~~~~~~~~~~~~~~~~lv~ 629 (854)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+ .+.. +.+++.+....+ .....|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~--~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE--TYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS--SCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC--CCCcceEEE
Confidence 4568899999999874 24888986432 2346788999999988 3332 455555443221 112458999
Q ss_pred eeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 043388 630 EYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC--------------------------------- 676 (854)
Q Consensus 630 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~--------------------------------- 676 (854)
|+++|.++.+.... .++..++..++.++++.++.||+..
T Consensus 96 ~~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN--------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHHH--------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCccccc--------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 99999888653321 4677778888999999999998611
Q ss_pred ----------------------CCCeEeecCCCCceEecC--Ccc-cccccccccccccCCCCCCccc-----------c
Q 043388 677 ----------------------QPPIVHGDLKPSNVLLDH--DMV-AHQNFSLSHQLDSASKTPSSSI-----------G 720 (854)
Q Consensus 677 ----------------------~~~ivH~Dlkp~NIll~~--~~~-~~~Dfg~~~~~~~~~~~~~~~~-----------~ 720 (854)
.+.++|+|++|.||+++. +.. .++||+.+........-..... .
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 247 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSK 247 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHH
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHH
Confidence 135899999999999988 443 4569998875433211000000 0
Q ss_pred cCCcccccC-ccccCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 043388 721 IKGTVGYVA-PEYGMGSEASMTGDVYSFGILLLEMFTGRRPTD 762 (854)
Q Consensus 721 ~~gt~~y~a-PE~~~~~~~~~~sDv~slGvvl~elltg~~pf~ 762 (854)
+....++.. |+.... .....+.|++|.++|.+.+|..+|.
T Consensus 248 ~l~~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 248 ILNHYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000001111 221111 1223689999999999999988753
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=4.6e-09 Score=113.61 Aligned_cols=144 Identities=15% Similarity=0.180 Sum_probs=104.0
Q ss_pred cCccCCCcceEEEEeEECCCceEEEEEEee--ccc-ccchHHHHHHHHHHHhcc--CCCeeeEEEEeeccCCCCCceeeE
Q 043388 553 SNMIGQGSFGSVYKGILGGEEMIVAVKVIN--LKQ-KGAFRSFVAECEALRNIR--HRNLIKIITICSSIDSKGADFKAL 627 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~l 627 (854)
.+.++.|.++.||++... +..+++|+.. ... ......+.+|+.+++.+. +..+.++++++.+... ....++
T Consensus 43 ~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~--~g~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV--IGRAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT--TSSCEE
T ss_pred EEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc--cCCeEE
Confidence 467899999999999875 3468888775 322 122356788999999996 4568899988865431 124689
Q ss_pred EEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC-------------------------------
Q 043388 628 VFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC------------------------------- 676 (854)
Q Consensus 628 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~------------------------------- 676 (854)
||||++|..+.+... ..++..++..++.+++++|+.||+..
T Consensus 119 vme~v~G~~l~~~~~--------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (359)
T 3dxp_A 119 IMEFVSGRVLWDQSL--------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE 190 (359)
T ss_dssp EEECCCCBCCCCTTC--------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCeecCCCcc--------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence 999999977754211 14677888899999999999999731
Q ss_pred ------------------------CCCeEeecCCCCceEecCCc---cccccccccccc
Q 043388 677 ------------------------QPPIVHGDLKPSNVLLDHDM---VAHQNFSLSHQL 708 (854)
Q Consensus 677 ------------------------~~~ivH~Dlkp~NIll~~~~---~~~~Dfg~~~~~ 708 (854)
.+.++|+|++|.||+++.++ +.++||+.+...
T Consensus 191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 24799999999999998764 245699988654
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.63 E-value=3.4e-09 Score=107.34 Aligned_cols=107 Identities=22% Similarity=0.211 Sum_probs=77.4
Q ss_pred hhcCCCCCE--Eeccccccc---ccCCccccCcCCCCeeecccccccc--cCCcCccCCCCCcEEecccccCcccChhhh
Q 043388 12 IGSLLNLQT--LAIDFNYLT---GQLPDFVGNLSALGMLLIRWNSLGG--QIPTTLGLLRNLVYLNVAENQFSGMFPRWI 84 (854)
Q Consensus 12 ~~~l~~L~~--L~L~~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 84 (854)
|...+.|+. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455555 667777443 2222233567889999999999987 4557778899999999999999865 334
Q ss_pred cCCC--CCceeeecccccccccCc------ccccCCCCCcEEEc
Q 043388 85 CNIS--SLEFIYLTVNRFSGSLPF------DILVNLPNLKELYL 120 (854)
Q Consensus 85 ~~l~--~L~~L~L~~N~l~~~~~~------~~~~~l~~L~~L~l 120 (854)
..++ +|++|+|++|.+.+.+|. .++..+|+|+.||-
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLDG 258 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEESS
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeECC
Confidence 4444 899999999999876663 35778888888773
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=3.8e-07 Score=96.58 Aligned_cols=136 Identities=16% Similarity=0.170 Sum_probs=98.4
Q ss_pred hccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccC----CCeeeEEEEeeccCCCCCce
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRH----RNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~~ 624 (854)
.....+.++.|....||++ +..+++|+..... ....+.+|.++++.+.+ ..+.+++++ + .
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~-----~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----S-----D 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C-----S
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----C-----C
Confidence 4455678999999999998 3458888764321 23568899999999866 234566554 1 3
Q ss_pred eeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCC---------------------------
Q 043388 625 KALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQ--------------------------- 677 (854)
Q Consensus 625 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~--------------------------- 677 (854)
.++||||++|.++.+.... .++..++..++.+++..++.||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQYH--------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCccccccccc--------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 5899999999888643221 45666777888888888888885421
Q ss_pred ---------------------------------CCeEeecCCCCceEecCCcc-ccccccccccc
Q 043388 678 ---------------------------------PPIVHGDLKPSNVLLDHDMV-AHQNFSLSHQL 708 (854)
Q Consensus 678 ---------------------------------~~ivH~Dlkp~NIll~~~~~-~~~Dfg~~~~~ 708 (854)
+.++|+|++|.||+++.+.+ .++||+.+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998775 56699987544
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=1.3e-08 Score=98.27 Aligned_cols=72 Identities=21% Similarity=0.290 Sum_probs=36.9
Q ss_pred ccccCCCCCCEEecCCCcCcccC----CcCccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEc--ccCcCc
Q 043388 148 DSLSNASNLERLDLSGNQFKGKV----SIDFSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSL--CDNQFG 221 (854)
Q Consensus 148 ~~~~~l~~L~~L~Ls~N~i~~~~----~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L--~~N~l~ 221 (854)
..+...++|++|+|++|+|.... ...+...++|++|+|++|.|+.... ..+..++...++|++|+| ++|.|+
T Consensus 59 ~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~--~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 59 EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI--LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH--HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH--HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 44455566666666666665322 2223334556666666665543211 123344555556666666 556655
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=1.5e-08 Score=97.79 Aligned_cols=128 Identities=17% Similarity=0.172 Sum_probs=89.5
Q ss_pred cChhhhcCCCCCceeeeccc-ccccccC---cccccCCCCCcEEEcccCCCCCCceeeccCccCCCCCCCCCCccccCCC
Q 043388 79 MFPRWICNISSLEFIYLTVN-RFSGSLP---FDILVNLPNLKELYLTFCSLKNLWWLNLEQNNLGMGTASSIPDSLSNAS 154 (854)
Q Consensus 79 ~~p~~~~~l~~L~~L~L~~N-~l~~~~~---~~~~~~l~~L~~L~l~~n~l~~L~~L~L~~N~l~~~~~~~~p~~~~~l~ 154 (854)
.+...+...++|++|+|++| .|...-- ...+...++|++ |+|++|.|+..++..+...+...+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~-------------L~Ls~n~i~~~g~~~l~~~L~~n~ 93 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKK-------------FSIVGTRSNDPVAFALAEMLKVNN 93 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCE-------------EECTTSCCCHHHHHHHHHHHHHCS
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCE-------------EECcCCCCChHHHHHHHHHHHhCC
Confidence 45567788999999999999 8862110 122333444554 455555554444445566777788
Q ss_pred CCCEEecCCCcCccc----CCcCccccCCCCeEec--ccccccCCCCCChhhhhhccCCCCCcEEEcccCcCc
Q 043388 155 NLERLDLSGNQFKGK----VSIDFSSLKNLWWLNL--EQNNLGMGTANDLDFVTLLTNCSSLKALSLCDNQFG 221 (854)
Q Consensus 155 ~L~~L~Ls~N~i~~~----~~~~f~~l~~L~~L~L--~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 221 (854)
+|++|+|++|+|... ....+...++|++|+| ++|.|+..... .+...+...++|++|+|++|.+.
T Consensus 94 ~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~--~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 94 TLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEM--EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH--HHHHHHHHCSSCCEEECCCSSHH
T ss_pred CcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH--HHHHHHHhCCCcCEEeccCCCCC
Confidence 999999999999864 2456777889999999 88998743322 34556777889999999999886
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.42 E-value=8.6e-08 Score=97.08 Aligned_cols=86 Identities=17% Similarity=0.140 Sum_probs=70.4
Q ss_pred CchhhhcCCCCCEEecccccccc--cCCccccCcCCCCeeecccccccccCCcCccCCC--CCcEEecccccCcccCh--
Q 043388 8 IPEEIGSLLNLQTLAIDFNYLTG--QLPDFVGNLSALGMLLIRWNSLGGQIPTTLGLLR--NLVYLNVAENQFSGMFP-- 81 (854)
Q Consensus 8 ~p~~~~~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p-- 81 (854)
++....++++|++|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..++ +|++|+|++|.+++..|
T Consensus 162 l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~ 239 (267)
T 3rw6_A 162 LRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQ 239 (267)
T ss_dssp HHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSH
T ss_pred HHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcc
Confidence 33344678999999999999997 4567888999999999999999965 4455555 99999999999997655
Q ss_pred -----hhhcCCCCCceeee
Q 043388 82 -----RWICNISSLEFIYL 95 (854)
Q Consensus 82 -----~~~~~l~~L~~L~L 95 (854)
..+..+++|+.||=
T Consensus 240 ~~y~~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 240 STYISAIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHHHHHHCTTCCEESS
T ss_pred hhHHHHHHHHCcccCeECC
Confidence 35788999998873
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.39 E-value=1e-06 Score=91.21 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=60.4
Q ss_pred ccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCC---CeeeEEEEeeccCCCCCceeeEE
Q 043388 552 SSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR---NLIKIITICSSIDSKGADFKALV 628 (854)
Q Consensus 552 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv 628 (854)
..+.||.|.++.||++... +|+.++||+...........+.+|++.++.+.+. .+.+++++. ..++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~lv 88 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTLA 88 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEEE
T ss_pred ceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEEE
Confidence 3567999999999999886 6788999997544333446789999999999765 578888763 24899
Q ss_pred EeeccCCCH
Q 043388 629 FEYMENGSL 637 (854)
Q Consensus 629 ~e~~~~gsL 637 (854)
|||++++++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999875
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=1.6e-06 Score=89.41 Aligned_cols=142 Identities=15% Similarity=0.063 Sum_probs=98.5
Q ss_pred HHhhccccCccCCCcce-EEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCCCCc
Q 043388 546 ATSEFASSNMIGQGSFG-SVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSKGAD 623 (854)
Q Consensus 546 ~~~~~~~~~~lg~G~~g-~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 623 (854)
....|+. +.+..|..| .||+.....++..+++|+-... ....+.+|+..++.+. +--|.++++++.+.+
T Consensus 23 ~l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~----- 93 (272)
T 4gkh_A 23 DLYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD----- 93 (272)
T ss_dssp HHTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT-----
T ss_pred cccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC-----
Confidence 3344443 234445554 6999888767778999987543 2356788999999884 334778888876654
Q ss_pred eeeEEEeeccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcC---------------------------
Q 043388 624 FKALVFEYMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHC--------------------------- 676 (854)
Q Consensus 624 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~--------------------------- 676 (854)
..++|||+++|.++.+...... .....++.+++..|+.||+..
T Consensus 94 ~~~lvme~l~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (272)
T 4gkh_A 94 DAWLLTTAIPGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVD 163 (272)
T ss_dssp EEEEEEECCCSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCC
T ss_pred eEEEEEEeeCCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhh
Confidence 6799999999988877654321 123356667777777777531
Q ss_pred ----------------------------CCCeEeecCCCCceEecCCccc-cccccccc
Q 043388 677 ----------------------------QPPIVHGDLKPSNVLLDHDMVA-HQNFSLSH 706 (854)
Q Consensus 677 ----------------------------~~~ivH~Dlkp~NIll~~~~~~-~~Dfg~~~ 706 (854)
.+.++|+|+.+.||+++.+.+. +|||+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 164 ASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp GGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred hhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1138999999999999988765 56998654
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.29 E-value=2.3e-06 Score=89.76 Aligned_cols=135 Identities=15% Similarity=0.130 Sum_probs=89.9
Q ss_pred CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCC---CeeeEEEEeeccCCCCCceeeEEEe
Q 043388 554 NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR---NLIKIITICSSIDSKGADFKALVFE 630 (854)
Q Consensus 554 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~lv~e 630 (854)
+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .|.+++.++.... ...++|||
T Consensus 25 ~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~----g~~~~v~e 93 (306)
T 3tdw_A 25 ESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD----GNPFVGYR 93 (306)
T ss_dssp EEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT----SCEEEEEE
T ss_pred eecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC----CceEEEEe
Confidence 45788888899998 3447888753 222346788999999999642 3667777664221 24689999
Q ss_pred eccCCCHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhc-----------------------------------
Q 043388 631 YMENGSLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHH----------------------------------- 675 (854)
Q Consensus 631 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~----------------------------------- 675 (854)
|++|.++.+.... .++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~ 165 (306)
T 3tdw_A 94 KVQGQILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLD 165 (306)
T ss_dssp CCCSEECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSC
T ss_pred ccCCeECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccc
Confidence 9999888763211 233444455555555555555542
Q ss_pred ----------------------CCCCeEeecCCCCceEecC----Ccc-cccccccccc
Q 043388 676 ----------------------CQPPIVHGDLKPSNVLLDH----DMV-AHQNFSLSHQ 707 (854)
Q Consensus 676 ----------------------~~~~ivH~Dlkp~NIll~~----~~~-~~~Dfg~~~~ 707 (854)
.++.++|+|++|.||+++. +.+ .++||+.+..
T Consensus 166 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 166 ESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 343 4569987643
No 422
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.13 E-value=1.3e-05 Score=87.54 Aligned_cols=76 Identities=14% Similarity=0.093 Sum_probs=50.0
Q ss_pred cCccCCCcceEEEEeEECCCceEEEEEEeecccc-------cchHHHHHHHHHHHhccC--C-CeeeEEEEeeccCCCCC
Q 043388 553 SNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQK-------GAFRSFVAECEALRNIRH--R-NLIKIITICSSIDSKGA 622 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~~~~~~~~~~~~~~ 622 (854)
.+.+|.|..+.||++....+++.|+||....... ...+++.+|.++++.+.. + .+.+++.+.. +
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~--~---- 108 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT--E---- 108 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET--T----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC--C----
Confidence 4578999999999998765667899998653211 223567889999988842 3 4456665421 1
Q ss_pred ceeeEEEeeccCC
Q 043388 623 DFKALVFEYMENG 635 (854)
Q Consensus 623 ~~~~lv~e~~~~g 635 (854)
..++||||+++.
T Consensus 109 -~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 -MAVTVMEDLSHL 120 (397)
T ss_dssp -TTEEEECCCTTS
T ss_pred -ccEEEEEeCCCc
Confidence 247999999764
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.04 E-value=1.3e-05 Score=86.05 Aligned_cols=76 Identities=8% Similarity=0.070 Sum_probs=55.9
Q ss_pred ccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCC--CeeeEEEEeeccCCCCCceeeEEE
Q 043388 552 SSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR--NLIKIITICSSIDSKGADFKALVF 629 (854)
Q Consensus 552 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~ 629 (854)
..+.++.|....+|+... ++..+++|+.... ..+.+|+.+++.+... .+.++++++.... ...++||
T Consensus 45 ~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~ 113 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCIS 113 (362)
T ss_dssp EEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEE
T ss_pred eEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEE
Confidence 346688899999999886 4678899987432 3588999999998643 3567777665432 2578999
Q ss_pred eeccCCCHH
Q 043388 630 EYMENGSLE 638 (854)
Q Consensus 630 e~~~~gsL~ 638 (854)
||++|.++.
T Consensus 114 e~l~G~~l~ 122 (362)
T 3ovc_A 114 RRAQGVTLQ 122 (362)
T ss_dssp ECCCSEETT
T ss_pred EecCCCCcc
Confidence 999986654
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.96 E-value=2.4e-05 Score=84.12 Aligned_cols=85 Identities=11% Similarity=0.021 Sum_probs=57.1
Q ss_pred cCcc-CCCcceEEEEeEEC--C----CceEEEEEEeeccc---ccchHHHHHHHHHHHhcc-C--CCeeeEEEEeeccCC
Q 043388 553 SNMI-GQGSFGSVYKGILG--G----EEMIVAVKVINLKQ---KGAFRSFVAECEALRNIR-H--RNLIKIITICSSIDS 619 (854)
Q Consensus 553 ~~~l-g~G~~g~V~~~~~~--~----~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~ 619 (854)
.+.| +.|....+|+.... . ++..+++|+..... ......+.+|+.+++.+. + -.+.++++++.+...
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88889999998753 1 15678899875432 111245788999999884 3 357788887754321
Q ss_pred CCCceeeEEEeeccCCCHHH
Q 043388 620 KGADFKALVFEYMENGSLED 639 (854)
Q Consensus 620 ~~~~~~~lv~e~~~~gsL~~ 639 (854)
....++||||++|.++.+
T Consensus 105 --~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 --LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp --TSSCEEEEECCCCBCCCB
T ss_pred --cCCceEEEEecCCCChhh
Confidence 124589999999877653
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.85 E-value=3.2e-06 Score=79.16 Aligned_cols=84 Identities=10% Similarity=0.003 Sum_probs=56.4
Q ss_pred CCCCeeecccccccccCCcCccCCCCCcEEeccccc-CcccChhhhcCC----CCCceeeecccc-cccccCcccccCCC
Q 043388 40 SALGMLLIRWNSLGGQIPTTLGLLRNLVYLNVAENQ-FSGMFPRWICNI----SSLEFIYLTVNR-FSGSLPFDILVNLP 113 (854)
Q Consensus 40 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~~l~ 113 (854)
-.|+.|||++|.|+..--..+..+++|++|+|++|. |++.--..++.+ ++|++|+|+++. |+ .---..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT-D~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT-DKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC-HHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC-HHHHHHHhcCC
Confidence 467788888887776555566777888888888874 665444555554 368888888864 65 22223356677
Q ss_pred CCcEEEcccCC
Q 043388 114 NLKELYLTFCS 124 (854)
Q Consensus 114 ~L~~L~l~~n~ 124 (854)
+|++|++++|.
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 88888887764
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.83 E-value=3.2e-05 Score=80.34 Aligned_cols=79 Identities=16% Similarity=0.122 Sum_probs=58.4
Q ss_pred hccccCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc-C--CCeeeEEEEeeccCCCCCcee
Q 043388 549 EFASSNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR-H--RNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 549 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~~~~~~~~~ 625 (854)
+....+.+|.|..+.||+.+.. +|+.|++|+...........+.+|+..|+.+. . --+.+++++. ..
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~~ 85 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DR 85 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------Cc
Confidence 3445677899999999999987 78889999876554444456889999999884 2 2456666642 23
Q ss_pred eEEEeeccCCCH
Q 043388 626 ALVFEYMENGSL 637 (854)
Q Consensus 626 ~lv~e~~~~gsL 637 (854)
++||||++++..
T Consensus 86 ~lv~e~l~~~~~ 97 (288)
T 3f7w_A 86 TLAMEWVDERPP 97 (288)
T ss_dssp EEEEECCCCCCC
T ss_pred eEEEEeecccCC
Confidence 789999987643
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=9.7e-06 Score=75.86 Aligned_cols=92 Identities=9% Similarity=0.082 Sum_probs=71.9
Q ss_pred CchhhhcCCCCCEEecccccccccCCccccCcCCCCeeeccccc-ccccCCcCccCC----CCCcEEeccccc-CcccCh
Q 043388 8 IPEEIGSLLNLQTLAIDFNYLTGQLPDFVGNLSALGMLLIRWNS-LGGQIPTTLGLL----RNLVYLNVAENQ-FSGMFP 81 (854)
Q Consensus 8 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p 81 (854)
+|.....-.+|++|||+++.|+..--..+..+++|++|+|++|. |++.--..++.+ ++|++|+|++|. |++.--
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45433333579999999999987666778899999999999995 775444555554 479999999985 887666
Q ss_pred hhhcCCCCCceeeecccc
Q 043388 82 RWICNISSLEFIYLTVNR 99 (854)
Q Consensus 82 ~~~~~l~~L~~L~L~~N~ 99 (854)
..+..+++|++|+|+++.
T Consensus 133 ~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HHGGGCTTCCEEEEESCT
T ss_pred HHHhcCCCCCEEECCCCC
Confidence 678889999999999885
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.72 E-value=6.7e-06 Score=78.51 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=19.6
Q ss_pred CceeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCc
Q 043388 128 LWWLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFK 167 (854)
Q Consensus 128 L~~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~ 167 (854)
|+.|+|++|.|+..++..+...+..-+.|++|+|++|+|.
T Consensus 72 L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 72 IEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3334444444444444444445555555555555555554
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.68 E-value=7.4e-06 Score=78.19 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=44.0
Q ss_pred CCCCccccCCCCCCEEecCCCcCcccCCcC----ccccCCCCeEecccccccCCCCCChhhhhhccCCCCCcEEEcccC
Q 043388 144 SSIPDSLSNASNLERLDLSGNQFKGKVSID----FSSLKNLWWLNLEQNNLGMGTANDLDFVTLLTNCSSLKALSLCDN 218 (854)
Q Consensus 144 ~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~----f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~~l~~L~~L~L~~N 218 (854)
..+-..+..-+.|+.|+|++|+|....... +..-+.|++|+|+.|.|+.... ..+..++..-+.|++|+|++|
T Consensus 60 ~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga--~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 60 RSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL--ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH--HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH--HHHHHHHhhCCceeEEECCCC
Confidence 344456666677888888888877444333 3345667777777777753222 233445556666777777654
No 430
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.00024 Score=73.99 Aligned_cols=75 Identities=17% Similarity=0.115 Sum_probs=57.6
Q ss_pred cCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhcc---CCCeeeEEEEeeccCCCCCceeeEEE
Q 043388 553 SNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIR---HRNLIKIITICSSIDSKGADFKALVF 629 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~lv~ 629 (854)
.+.|+.|....+|+.... +..+++|+.... ....+.+|++.|+.+. ...+.++++++...+ ..++||
T Consensus 41 ~~~l~gG~~n~~y~v~~~--~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g-----~~~lvm 110 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE--VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG-----HSFLLL 110 (312)
T ss_dssp EEEECCSSSSEEEEEESS--SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS-----EEEEEE
T ss_pred eEEeCCccceeeeEEEEC--CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC-----ceEEEE
Confidence 356899999999999763 557888987643 2467889999999884 356888888875533 579999
Q ss_pred eeccCCCH
Q 043388 630 EYMENGSL 637 (854)
Q Consensus 630 e~~~~gsL 637 (854)
||+++..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998764
No 431
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.48 E-value=0.00044 Score=73.63 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=42.1
Q ss_pred CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccC--CCeeeEEEEeeccC-CCCCceeeEEEe
Q 043388 554 NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRH--RNLIKIITICSSID-SKGADFKALVFE 630 (854)
Q Consensus 554 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~-~~~~~~~~lv~e 630 (854)
+.|+.|..+.||++... ++ .+++|+.... ......|..+++.+.. -.+.+++....... .......++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~-~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD-SG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET-TE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC-CC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34666778999999875 34 4889988642 2344566777766631 23344443110000 000125689999
Q ss_pred eccCCCH
Q 043388 631 YMENGSL 637 (854)
Q Consensus 631 ~~~~gsL 637 (854)
|++|.++
T Consensus 112 ~i~G~~~ 118 (346)
T 2q83_A 112 WIEGRPF 118 (346)
T ss_dssp CCCCBCC
T ss_pred eecCccC
Confidence 9998654
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.35 E-value=0.00053 Score=75.24 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=49.4
Q ss_pred CCCeEeecCCCCceEecCCcccccccccccccccCCCCCCcccccCCcccccCccccCCC---CCCccchhHHHHHHHHH
Q 043388 677 QPPIVHGDLKPSNVLLDHDMVAHQNFSLSHQLDSASKTPSSSIGIKGTVGYVAPEYGMGS---EASMTGDVYSFGILLLE 753 (854)
Q Consensus 677 ~~~ivH~Dlkp~NIll~~~~~~~~Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDv~slGvvl~e 753 (854)
.+.++|+|++|.|||++.+...+|||+.+........-..... .-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~~~lID~e~a~~G~p~~Dla~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDSTQVIDPEFSFYGPMGFDIGAYLG--NLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSCEEECCCTTCEEECHHHHHHHHHH--HHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCCCEEEeCcccccCchHHHHHHHHH--HHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 3489999999999999988877789998875543211000000 011346666655321 12234566788888888
Q ss_pred HHhCC
Q 043388 754 MFTGR 758 (854)
Q Consensus 754 lltg~ 758 (854)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.20 E-value=0.00045 Score=61.57 Aligned_cols=62 Identities=21% Similarity=0.296 Sum_probs=50.1
Q ss_pred ceeeccCcccc-cCCCcccccCCCCCEEEccCcccccccchhhcCccCCCeeecccccCcccCCC
Q 043388 388 EYLDISSNSFH-GVIPFSLGFMKSIKELNVSSNNLSGQIPEFLQNLSFLEFLNLSYNHLEGEVPT 451 (854)
Q Consensus 388 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 451 (854)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+...++.|..+++|+.|+|++|+|.+..-.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCcc
Confidence 47889999987 34554432 4699999999999988888899999999999999999886543
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.15 E-value=0.0012 Score=68.76 Aligned_cols=71 Identities=10% Similarity=0.094 Sum_probs=44.7
Q ss_pred cCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCe-eeEEEEeeccCCCCCceeeEEEee
Q 043388 553 SNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL-IKIITICSSIDSKGADFKALVFEY 631 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 631 (854)
.+.|+.|....+|++ ..+++|+........ .+..+|+.+++.+....+ .++++++.+ ..++|+||
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~~-------~~~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDPA-------TGVMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECTT-------TCCEEEEC
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEECC-------CCEEEEee
Confidence 567888999999999 248889876432221 223578888887743222 466655322 23789999
Q ss_pred c-cCCCH
Q 043388 632 M-ENGSL 637 (854)
Q Consensus 632 ~-~~gsL 637 (854)
+ +|.++
T Consensus 89 i~~g~~l 95 (301)
T 3dxq_A 89 IAGAQTM 95 (301)
T ss_dssp CTTCEEC
T ss_pred cCCCccC
Confidence 9 65444
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.14 E-value=0.00058 Score=60.82 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=40.2
Q ss_pred eeeccCccCCCCCCCCCCccccCCCCCCEEecCCCcCcccCCcCccccCCCCeEeccccccc
Q 043388 130 WLNLEQNNLGMGTASSIPDSLSNASNLERLDLSGNQFKGKVSIDFSSLKNLWWLNLEQNNLG 191 (854)
Q Consensus 130 ~L~L~~N~l~~~~~~~~p~~~~~l~~L~~L~Ls~N~i~~~~~~~f~~l~~L~~L~L~~N~l~ 191 (854)
.++.+++.|+. ..+|..+ -++|++|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~---~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTW---ASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCT---TTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCcc---ccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 44555555510 1456543 346889999999999888888888888888888888763
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.12 E-value=0.00086 Score=70.62 Aligned_cols=166 Identities=13% Similarity=0.103 Sum_probs=89.4
Q ss_pred CcccHHHHHHHHhhccc-----cCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCC--ee
Q 043388 536 PMISYAELSKATSEFAS-----SNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN--LI 608 (854)
Q Consensus 536 ~~~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv 608 (854)
..++.+++......|.. .+.|+.|....+|+.... ++ .+++|+..... ..+.+..|+.++..+.... +.
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 34566777777777765 235667888899999875 34 58899886521 2245667888888874322 33
Q ss_pred eEEEEeeccCC--CCCceeeEEEeeccCCCHHH--------------HhhhcC-Ccccc-----cccCHHHHHH------
Q 043388 609 KIITICSSIDS--KGADFKALVFEYMENGSLED--------------WLHQSN-DHLEV-----CKLTLIQRVN------ 660 (854)
Q Consensus 609 ~~~~~~~~~~~--~~~~~~~lv~e~~~~gsL~~--------------~l~~~~-~~~~~-----~~~~~~~~~~------ 660 (854)
+++... +... ......+++|+|++|..+.. .++... ..... ....|.....
T Consensus 81 ~~~~~~-~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 81 LPLPRK-DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CBCCBT-TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred cccCCC-CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 333211 0000 00124689999999865321 011110 00000 0011222100
Q ss_pred ------HHHHHHHHHHHHHhc----CCCCeEeecCCCCceEecCCcc-ccccccccc
Q 043388 661 ------IAIDVASAIEYLHHH----CQPPIVHGDLKPSNVLLDHDMV-AHQNFSLSH 706 (854)
Q Consensus 661 ------i~~~ia~~L~~LH~~----~~~~ivH~Dlkp~NIll~~~~~-~~~Dfg~~~ 706 (854)
+...+...++++++. .+.+++|+|+++.||+++.+.+ .+|||+.+.
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 111244556666532 2347999999999999998776 467998653
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.96 E-value=0.0059 Score=64.30 Aligned_cols=97 Identities=11% Similarity=0.065 Sum_probs=60.2
Q ss_pred CCcccHHHHHHHHhhcccc-----CccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCC--Ce
Q 043388 535 FPMISYAELSKATSEFASS-----NMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHR--NL 607 (854)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~~-----~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--ni 607 (854)
+...+.+.+....+.|... ..++ |....||++... +|+.+++|+...... ....+..|..++..+... .+
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCee
Confidence 4556777777777777542 2355 777899988765 455789999864321 235677899888888432 24
Q ss_pred eeEEEEeeccCC--CCCceeeEEEeeccCCC
Q 043388 608 IKIITICSSIDS--KGADFKALVFEYMENGS 636 (854)
Q Consensus 608 v~~~~~~~~~~~--~~~~~~~lv~e~~~~gs 636 (854)
++++.. +... ......++||||++|.+
T Consensus 85 p~~~~~--~g~~~~~~~g~~~~l~~~i~G~~ 113 (328)
T 1zyl_A 85 AAPVAF--NGQTLLNHQGFYFAVFPSVGGRQ 113 (328)
T ss_dssp CCCCCB--TTBSCEEETTEEEEEEECCCCEE
T ss_pred cceeec--CCcEEEEECCEEEEEEEecCCCC
Confidence 444433 1110 00124578999998754
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.85 E-value=0.007 Score=63.90 Aligned_cols=78 Identities=5% Similarity=-0.045 Sum_probs=41.0
Q ss_pred CccCCCcceE-EEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccC--CCeeeEEEEeeccCCCCCceeeEEEe
Q 043388 554 NMIGQGSFGS-VYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRH--RNLIKIITICSSIDSKGADFKALVFE 630 (854)
Q Consensus 554 ~~lg~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 630 (854)
+.|+.|.... +|+.... ++..+++|....... ..+..|+.+++.+.. -.+.+++.+.... .++|||
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~-------g~ll~e 92 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR-------GLLLIE 92 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT-------TEEEEC
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC-------CEEEEe
Confidence 4565565544 6677643 355677776543321 234567777777742 2356677653221 268999
Q ss_pred eccCCCHHHHhh
Q 043388 631 YMENGSLEDWLH 642 (854)
Q Consensus 631 ~~~~gsL~~~l~ 642 (854)
++.+.++.+++.
T Consensus 93 ~l~~~~l~~~l~ 104 (333)
T 3csv_A 93 DLGDALFTEVIN 104 (333)
T ss_dssp CCCSCBHHHHHH
T ss_pred eCCCcchHHHhc
Confidence 998777765543
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.76 E-value=0.0031 Score=69.02 Aligned_cols=74 Identities=22% Similarity=0.159 Sum_probs=50.5
Q ss_pred cCccCCCcceEEEEeEECC-------CceEEEEEEeecccccchHHHHHHHHHHHhccCCC-eeeEEEEeeccCCCCCce
Q 043388 553 SNMIGQGSFGSVYKGILGG-------EEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN-LIKIITICSSIDSKGADF 624 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~ 624 (854)
.+.|+.|....||++...+ ++..+++|+.... ...+.+.+|..+++.+...+ ..++++.+. +
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~------ 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G------ 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C------
Confidence 3567888899999998753 2467899988432 11255668999999884333 356776542 1
Q ss_pred eeEEEeeccCCCH
Q 043388 625 KALVFEYMENGSL 637 (854)
Q Consensus 625 ~~lv~e~~~~gsL 637 (854)
.+||||++|.++
T Consensus 148 -g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 -GRLEEYIPSRPL 159 (429)
T ss_dssp -EEEECCCCEEEC
T ss_pred -CEEEEEeCCccc
Confidence 389999987443
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.69 E-value=0.0021 Score=69.03 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=45.6
Q ss_pred cCccCCCcceEEEEeEECCC--------ceEEEEEEeecccccchHHHHHHHHHHHhccCCC-eeeEEEEeeccCCCCCc
Q 043388 553 SNMIGQGSFGSVYKGILGGE--------EMIVAVKVINLKQKGAFRSFVAECEALRNIRHRN-LIKIITICSSIDSKGAD 623 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~ 623 (854)
.+.++.|....+|++...+. +..+++|+....... ..+..+|.++++.+...+ +.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~------ 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N------ 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T------
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C------
Confidence 35678888889999987631 267889987543221 123467888888885333 44666543 1
Q ss_pred eeeEEEeeccCCCH
Q 043388 624 FKALVFEYMENGSL 637 (854)
Q Consensus 624 ~~~lv~e~~~~gsL 637 (854)
-++||||++|.++
T Consensus 109 -~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 -GGRIEEWLYGDPL 121 (369)
T ss_dssp -TEEEEECCCSEEC
T ss_pred -CcEEEEEecCCcC
Confidence 2689999987543
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.59 E-value=0.014 Score=55.76 Aligned_cols=102 Identities=19% Similarity=0.159 Sum_probs=65.0
Q ss_pred CHHHHhhhcCCcccccccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCcccccccccccccccCCCCC
Q 043388 636 SLEDWLHQSNDHLEVCKLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQNFSLSHQLDSASKTP 715 (854)
Q Consensus 636 sL~~~l~~~~~~~~~~~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~Dfg~~~~~~~~~~~~ 715 (854)
||.++|...+. ++++++++.++.|.+.+|.-.-.... + ..+=+.|..|++..+|.+-..+..+.
T Consensus 34 SL~eIL~~~~~-----PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~~~s~--------- 97 (229)
T 2yle_A 34 SLEEILRLYNQ-----PINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAPAADD--------- 97 (229)
T ss_dssp EHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECCC------------
T ss_pred cHHHHHHHcCC-----CcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccccccc---------
Confidence 89999987754 89999999999999999877622111 1 12223468888888776654322111
Q ss_pred CcccccCCcccccCccccCCCCCCccchhHHHHHHHHHHHhCCCC
Q 043388 716 SSSIGIKGTVGYVAPEYGMGSEASMTGDVYSFGILLLEMFTGRRP 760 (854)
Q Consensus 716 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDv~slGvvl~elltg~~p 760 (854)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1233466888764 3567888999999999999874444
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.57 E-value=0.005 Score=65.84 Aligned_cols=142 Identities=13% Similarity=0.131 Sum_probs=79.3
Q ss_pred CccCCCcceEEEEeEECC-------CceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCCCCcee
Q 043388 554 NMIGQGSFGSVYKGILGG-------EEMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSKGADFK 625 (854)
Q Consensus 554 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 625 (854)
+.+..|-...+|++.... ++..|++|+.... ........+|.++++.+. +.-..++++++..
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~--------- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE--------- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT---------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC---------
Confidence 457778888999998752 3467899986332 223456679999998884 3334567766531
Q ss_pred eEEEeeccCCCHHHH-----------------hhhcCCccccccc--CHHHHHHHHHHHHH-------------------
Q 043388 626 ALVFEYMENGSLEDW-----------------LHQSNDHLEVCKL--TLIQRVNIAIDVAS------------------- 667 (854)
Q Consensus 626 ~lv~e~~~~gsL~~~-----------------l~~~~~~~~~~~~--~~~~~~~i~~~ia~------------------- 667 (854)
.+||||++|.++..- ++....... ... -+.++.++..++..
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~-~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFT-KEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKD 204 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSC-CSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCC-CCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHH
Confidence 389999998655311 011110000 011 23444444443321
Q ss_pred HHHHHHh----c-CCCCeEeecCCCCceEecCC-----ccccccccccc
Q 043388 668 AIEYLHH----H-CQPPIVHGDLKPSNVLLDHD-----MVAHQNFSLSH 706 (854)
Q Consensus 668 ~L~~LH~----~-~~~~ivH~Dlkp~NIll~~~-----~~~~~Dfg~~~ 706 (854)
.++.|.+ . .+..++|+|+.+.||+++.+ .+.+|||..+.
T Consensus 205 ~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 205 EMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2333322 1 23468999999999999876 45566987654
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.56 E-value=0.0059 Score=67.12 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=49.2
Q ss_pred cCccCCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccCCCe-eeEEEEeeccCCCCCceeeEEEee
Q 043388 553 SNMIGQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRHRNL-IKIITICSSIDSKGADFKALVFEY 631 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 631 (854)
.+.|+.|-...+|++...+.+..+++|+........ -+..+|..+++.+...++ .++++++. + .+||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~-------G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N-------GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T-------EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C-------eEEEEe
Confidence 356788888999999987445788899875432221 122589999999864444 56777652 1 359999
Q ss_pred ccCCCH
Q 043388 632 MENGSL 637 (854)
Q Consensus 632 ~~~gsL 637 (854)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987544
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.38 E-value=0.026 Score=59.57 Aligned_cols=73 Identities=11% Similarity=0.113 Sum_probs=43.1
Q ss_pred CCCcceEEEEeEECCCceEEEEEEeecccccchHHHHHHHHHHHhccC---CCeeeEEEEeeccC-CCCCceeeEEEeec
Q 043388 557 GQGSFGSVYKGILGGEEMIVAVKVINLKQKGAFRSFVAECEALRNIRH---RNLIKIITICSSID-SKGADFKALVFEYM 632 (854)
Q Consensus 557 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~~~~~~~~~~-~~~~~~~~lv~e~~ 632 (854)
|.|....||+.... ++ .+++|+...... .+|+.++..+.. |.|++.+....... .......++||+|+
T Consensus 32 G~g~~N~vy~v~~~-~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i 103 (339)
T 3i1a_A 32 GADTNAFAYQADSE-SK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFI 103 (339)
T ss_dssp TSCSSCEEEEEECS-SC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECC
T ss_pred cCccccceEEEEeC-CC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEecc
Confidence 34446799999865 45 799998765432 357777777632 22445443211100 00123578999999
Q ss_pred cCCCH
Q 043388 633 ENGSL 637 (854)
Q Consensus 633 ~~gsL 637 (854)
+|..+
T Consensus 104 ~G~~~ 108 (339)
T 3i1a_A 104 HAPNG 108 (339)
T ss_dssp CCCBT
T ss_pred CCCcC
Confidence 98765
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.89 E-value=0.072 Score=57.05 Aligned_cols=75 Identities=13% Similarity=0.118 Sum_probs=46.8
Q ss_pred CccCCCcceEEEEeEECC-------CceEEEEEEeeccccc------------------chHHHHHHHHHHHhcc-CCCe
Q 043388 554 NMIGQGSFGSVYKGILGG-------EEMIVAVKVINLKQKG------------------AFRSFVAECEALRNIR-HRNL 607 (854)
Q Consensus 554 ~~lg~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~ni 607 (854)
+.|..|-...+|++.... .+..|.+++.-..... ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988753 1367888887432211 0122345888888884 4445
Q ss_pred eeEEEEeeccCCCCCceeeEEEeeccCCCH
Q 043388 608 IKIITICSSIDSKGADFKALVFEYMENGSL 637 (854)
Q Consensus 608 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL 637 (854)
.++++++. + .+|+||++|.+|
T Consensus 138 Pkl~~~~~--~-------G~i~efI~G~~L 158 (401)
T 3f2s_A 138 PKLYGIFP--Q-------GRLEQFIPSRRL 158 (401)
T ss_dssp CCEEEEET--T-------EEEEECCCEEEC
T ss_pred CeEEEEeC--C-------CeEEEecCCccC
Confidence 67777652 1 389999987554
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.14 E-value=0.082 Score=57.23 Aligned_cols=75 Identities=13% Similarity=0.134 Sum_probs=49.0
Q ss_pred cCccCCCcceEEEEeEECCC-------ceEEEEEEeecccccchHHHHHHHHHHHhcc-CCCeeeEEEEeeccCCCCCce
Q 043388 553 SNMIGQGSFGSVYKGILGGE-------EMIVAVKVINLKQKGAFRSFVAECEALRNIR-HRNLIKIITICSSIDSKGADF 624 (854)
Q Consensus 553 ~~~lg~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 624 (854)
.+.+..|-...+|+...... +..|++|+....... .-+..+|..+++.+. +.-..++++.+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~--------- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP--------- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC---------
Confidence 35567788889999988621 467899987543222 223467888888884 333456665431
Q ss_pred eeEEEeeccCCCH
Q 043388 625 KALVFEYMENGSL 637 (854)
Q Consensus 625 ~~lv~e~~~~gsL 637 (854)
-+.||||++|.++
T Consensus 145 ~~~I~efI~G~~l 157 (424)
T 3mes_A 145 EGRIEEFIDGEPL 157 (424)
T ss_dssp TEEEEECCCSEEC
T ss_pred CCEEEEEeCCccC
Confidence 2689999998654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.08 E-value=0.64 Score=50.05 Aligned_cols=28 Identities=25% Similarity=0.350 Sum_probs=20.2
Q ss_pred CeEeecCCCCceEecC------C-ccccccccccc
Q 043388 679 PIVHGDLKPSNVLLDH------D-MVAHQNFSLSH 706 (854)
Q Consensus 679 ~ivH~Dlkp~NIll~~------~-~~~~~Dfg~~~ 706 (854)
.++|+|+.+.||++.. + .+.+|||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 3679999999999943 2 34456887654
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.03 E-value=0.15 Score=55.97 Aligned_cols=61 Identities=13% Similarity=0.074 Sum_probs=17.8
Q ss_pred ccCccCCCcceEEEEeEECCCceEEEE------EEeecc--cccchHHHHHHHHHHHhccCCCeeeEEEEee
Q 043388 552 SSNMIGQGSFGSVYKGILGGEEMIVAV------KVINLK--QKGAFRSFVAECEALRNIRHRNLIKIITICS 615 (854)
Q Consensus 552 ~~~~lg~G~~g~V~~~~~~~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 615 (854)
..+.+| ||.||+|.+.....+||+ |..+.. .......+.+|..+++.++|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 356676 999999999765567888 665432 2233456888999999999999999888754
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.53 E-value=3.7 Score=27.82 Aligned_cols=10 Identities=40% Similarity=0.385 Sum_probs=4.0
Q ss_pred HHHHHhhhcc
Q 043388 512 TIVFARRRRS 521 (854)
Q Consensus 512 ~~~~~~rrr~ 521 (854)
.+++++|||+
T Consensus 30 ~~~~~~RRr~ 39 (44)
T 2ks1_B 30 GIGLFMRRRH 39 (44)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHhhhhH
Confidence 3334444433
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=67.70 E-value=5.6 Score=32.79 Aligned_cols=44 Identities=20% Similarity=0.176 Sum_probs=20.9
Q ss_pred CcccChhhhcCCCCCceeeecccccccccCcccccCCCCCcEEEcc
Q 043388 76 FSGMFPRWICNISSLEFIYLTVNRFSGSLPFDILVNLPNLKELYLT 121 (854)
Q Consensus 76 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~l~ 121 (854)
++.+...+|.++++|+.+.|-.+ ++ .|...+|.++.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEc
Confidence 34444445555555555555443 23 4444455555555544443
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=66.37 E-value=11 Score=30.94 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=38.8
Q ss_pred cccccccCCcCccCCCCCcEEecccccCcccChhhhcCCCCCceeeecccc
Q 043388 49 WNSLGGQIPTTLGLLRNLVYLNVAENQFSGMFPRWICNISSLEFIYLTVNR 99 (854)
Q Consensus 49 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 99 (854)
+..++.+-..+|.++++|+.+.|-.+ ++.+...+|.++++|+.+.+....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 34566677788888888888888876 566788888888888888887653
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=63.46 E-value=18 Score=34.35 Aligned_cols=82 Identities=16% Similarity=0.197 Sum_probs=57.8
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHhcCCCCeEeecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccCc
Q 043388 652 KLTLIQRVNIAIDVASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVAP 730 (854)
Q Consensus 652 ~~~~~~~~~i~~~ia~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~aP 730 (854)
..+...+++++..|+....++++. +|--+.|+||+++.++.+++ =.|+- .=++|
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik--------------------~~l~P 131 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQ--------------------NVVDP 131 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEET--------------------TTBSC
T ss_pred hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCc--------------------cCCCC
Confidence 678889999999999988666644 68889999999999987766 32321 11223
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 043388 731 EYGMGSEASMTGDVYSFGILLLEMFTGRRPTDA 763 (854)
Q Consensus 731 E~~~~~~~~~~sDv~slGvvl~elltg~~pf~~ 763 (854)
. ..+...=.-.+=+++..+++++..|+.
T Consensus 132 ~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 132 L-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp C-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred C-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 2 122222344677889999999998864
No 453
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=54.56 E-value=10 Score=25.67 Aligned_cols=9 Identities=33% Similarity=0.420 Sum_probs=3.5
Q ss_pred HHHHhhhcc
Q 043388 513 IVFARRRRS 521 (854)
Q Consensus 513 ~~~~~rrr~ 521 (854)
+++++|||+
T Consensus 30 ~~~~~RRRr 38 (44)
T 2l2t_A 30 FAVYVRRKS 38 (44)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhhhh
Confidence 334444333
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=46.24 E-value=47 Score=31.63 Aligned_cols=81 Identities=16% Similarity=0.171 Sum_probs=55.6
Q ss_pred ccCHHHHHHHHHHHHHHHH-HHHhcCCCCeEeecCCCCceEecCCccccc-ccccccccccCCCCCCcccccCCcccccC
Q 043388 652 KLTLIQRVNIAIDVASAIE-YLHHHCQPPIVHGDLKPSNVLLDHDMVAHQ-NFSLSHQLDSASKTPSSSIGIKGTVGYVA 729 (854)
Q Consensus 652 ~~~~~~~~~i~~~ia~~L~-~LH~~~~~~ivH~Dlkp~NIll~~~~~~~~-Dfg~~~~~~~~~~~~~~~~~~~gt~~y~a 729 (854)
..+..++++++..|+.... +++. -+|--+.|+||+++.++.+++ -.| -..-++
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~f~~~~~p~i~hRG--------------------i~~~lp 135 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLMFNRALEPFFLHVG--------------------VKESLP 135 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEEECTTCCEEESCCE--------------------ETTTBS
T ss_pred hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEEEeCCCcEEEEEcC--------------------CcccCC
Confidence 5678889999999888766 5554 477889999999999888776 333 223334
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 043388 730 PEYGMGSEASMTGDVYSFGILLLEMFTGRRPTD 762 (854)
Q Consensus 730 PE~~~~~~~~~~sDv~slGvvl~elltg~~pf~ 762 (854)
|.-+ +..-=.-.+=+++..++.++..|+
T Consensus 136 P~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 136 PDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp SCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred CCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 4321 222223456788888898888775
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=29.16 E-value=18 Score=23.89 Aligned_cols=11 Identities=27% Similarity=0.235 Sum_probs=4.0
Q ss_pred hhhHHHHHHHH
Q 043388 498 IPVVVSCLILS 508 (854)
Q Consensus 498 i~~~~~~~~~~ 508 (854)
+++++++++++
T Consensus 17 ~~vv~Gv~ll~ 27 (41)
T 2k9y_A 17 GGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHH
T ss_pred eehhHHHHHHH
Confidence 33333333333
Done!