Your job contains 1 sequence.
>043389
MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK
VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
SLQKIMQEFERQNEKMEMVTEVMGDAIDDALEGDDEEEETEELVNQVLDEIGIDINQELV
NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLRRM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043389
(223 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2054612 - symbol:VPS2.1 species:3702 "Arabidop... 899 4.0e-90 1
UNIPROTKB|E2RIU2 - symbol:CHMP2A "Uncharacterized protein... 570 2.9e-55 1
UNIPROTKB|O43633 - symbol:CHMP2A "Charged multivesicular ... 569 3.7e-55 1
MGI|MGI:1916203 - symbol:Chmp2a "charged multivesicular b... 569 3.7e-55 1
RGD|1305050 - symbol:Chmp2a "charged multivesicular body ... 569 3.7e-55 1
DICTYBASE|DDB_G0292400 - symbol:vps2B "SNF7 family protei... 567 6.1e-55 1
UNIPROTKB|Q3T0U5 - symbol:CHMP2A "Chromatin modifying pro... 565 9.9e-55 1
ZFIN|ZDB-GENE-040426-2922 - symbol:bc2 "putative breast a... 555 1.1e-53 1
WB|WBGene00012903 - symbol:vps-2 species:6239 "Caenorhabd... 553 1.9e-53 1
ASPGD|ASPL0000001940 - symbol:AN6898 species:162425 "Emer... 549 4.9e-53 1
UNIPROTKB|Q5ZHN1 - symbol:CHMP2A "Charged multivesicular ... 534 1.9e-51 1
FB|FBgn0039402 - symbol:vps2 "vps2" species:7227 "Drosoph... 496 4.2e-51 2
SGD|S000001485 - symbol:DID4 "Class E Vps protein of the ... 452 9.3e-43 1
CGD|CAL0003689 - symbol:VPS2 species:5476 "Candida albica... 443 8.4e-42 1
UNIPROTKB|Q5A501 - symbol:VPS2 "Putative uncharacterized ... 443 8.4e-42 1
POMBASE|SPAC4F8.01 - symbol:did4 "ESCRT III complex subun... 374 1.7e-34 1
UNIPROTKB|I3LSS2 - symbol:CHMP2A "Uncharacterized protein... 369 5.8e-34 1
TAIR|locus:2024107 - symbol:VPS2.3 "vacuolar protein sort... 366 1.2e-33 1
TAIR|locus:2163396 - symbol:VPS2.2 species:3702 "Arabidop... 359 6.7e-33 1
ZFIN|ZDB-GENE-040426-2539 - symbol:chmp2bb "chromatin mod... 309 1.3e-27 1
UNIPROTKB|F1NR65 - symbol:CHMP2B "Charged multivesicular ... 297 2.5e-26 1
DICTYBASE|DDB_G0290087 - symbol:vps2A "SNF7 family protei... 294 5.2e-26 1
UNIPROTKB|Q5F3A2 - symbol:CHMP2B "Charged multivesicular ... 294 5.2e-26 1
ZFIN|ZDB-GENE-070628-3 - symbol:chmp2ba "chromatin modify... 289 1.8e-25 1
FB|FBgn0035589 - symbol:CHMP2B "Charged multivesicular bo... 287 2.9e-25 1
UNIPROTKB|Q9UQN3 - symbol:CHMP2B "Charged multivesicular ... 287 2.9e-25 1
UNIPROTKB|E2R417 - symbol:CHMP2B "Uncharacterized protein... 284 5.9e-25 1
UNIPROTKB|F2Z5Q1 - symbol:CHMP2B "Uncharacterized protein... 284 5.9e-25 1
MGI|MGI:1916192 - symbol:Chmp2b "charged multivesicular b... 284 5.9e-25 1
UNIPROTKB|Q3SX42 - symbol:CHMP2B "Charged multivesicular ... 281 1.2e-24 1
WB|WBGene00007216 - symbol:C01A2.4 species:6239 "Caenorha... 280 1.6e-24 1
TAIR|locus:2172686 - symbol:VPS24.1 species:3702 "Arabido... 214 1.6e-17 1
DICTYBASE|DDB_G0284769 - symbol:vps24 "SNF7 family protei... 211 3.2e-17 1
WB|WBGene00020866 - symbol:T27F7.1 species:6239 "Caenorha... 211 3.2e-17 1
ZFIN|ZDB-GENE-040426-2600 - symbol:chmp3 "charged multive... 211 3.2e-17 1
RGD|708556 - symbol:Chmp3 "charged multivesicular body pr... 210 4.1e-17 1
FB|FBgn0036805 - symbol:Chmp1 "Chmp1" species:7227 "Droso... 208 6.7e-17 1
UNIPROTKB|Q58CS7 - symbol:CHMP3 "Charged multivesicular b... 207 8.6e-17 1
UNIPROTKB|Q9Y3E7 - symbol:CHMP3 "Charged multivesicular b... 206 1.1e-16 1
RGD|1593500 - symbol:Chmp1b "charged multivesicular body ... 206 1.1e-16 1
UNIPROTKB|E1C230 - symbol:VPS24 "Uncharacterized protein"... 205 1.4e-16 1
MGI|MGI:1913950 - symbol:Chmp3 "charged multivesicular bo... 204 1.8e-16 1
UNIPROTKB|E2RDX0 - symbol:CHMP3 "Uncharacterized protein"... 203 2.3e-16 1
UNIPROTKB|I3LFQ9 - symbol:CHMP3 "Uncharacterized protein"... 202 2.9e-16 1
ZFIN|ZDB-GENE-030131-8370 - symbol:chmp1b "chromatin modi... 201 3.7e-16 1
UNIPROTKB|Q7LBR1 - symbol:CHMP1B "Charged multivesicular ... 200 4.7e-16 1
MGI|MGI:1914278 - symbol:2610002M06Rik "RIKEN cDNA 261000... 200 4.7e-16 1
RGD|1566265 - symbol:RGD1566265 "similar to RIKEN cDNA 26... 200 4.7e-16 1
WB|WBGene00017735 - symbol:F23C8.6 species:6239 "Caenorha... 200 4.7e-16 1
UNIPROTKB|F1NVQ6 - symbol:CHMP1B "Charged multivesicular ... 199 6.0e-16 1
UNIPROTKB|Q5ZKX1 - symbol:CHMP1B "Charged multivesicular ... 199 6.0e-16 1
UNIPROTKB|Q5E994 - symbol:CHMP1B "Charged multivesicular ... 198 7.7e-16 1
MGI|MGI:1914314 - symbol:Chmp1b "charged multivesicular b... 198 7.7e-16 1
FB|FBgn0037231 - symbol:vps24 "Charged multivesicular bod... 194 2.0e-15 1
DICTYBASE|DDB_G0267394 - symbol:vps46 "SNF7 family protei... 191 4.2e-15 1
UNIPROTKB|F1SVC7 - symbol:CHMP3 "Uncharacterized protein"... 186 1.4e-14 1
POMBASE|SPBC13G1.12 - symbol:did2 "ESCRT III complex subu... 168 1.2e-12 1
UNIPROTKB|H9L0W3 - symbol:CHMP2A "Charged multivesicular ... 165 2.4e-12 1
UNIPROTKB|C9J0A7 - symbol:CHMP2B "Charged multivesicular ... 164 3.1e-12 1
ZFIN|ZDB-GENE-040426-1474 - symbol:chmp1a "chromatin modi... 162 5.0e-12 1
CGD|CAL0000893 - symbol:orf19.4307 species:5476 "Candida ... 161 1.4e-11 1
UNIPROTKB|Q5AG72 - symbol:DID2 "Putative uncharacterized ... 161 1.4e-11 1
UNIPROTKB|I3LU89 - symbol:CHMP1A "Uncharacterized protein... 154 3.5e-11 1
TAIR|locus:2007883 - symbol:VPS46.1 "vacuolar protein sor... 154 3.5e-11 1
UNIPROTKB|Q32KR9 - symbol:CHMP1A "Uncharacterized protein... 153 4.5e-11 1
MGI|MGI:1920159 - symbol:Chmp1a "charged multivesicular b... 153 4.5e-11 1
RGD|1311083 - symbol:Chmp1a "charged multivesicular body ... 153 4.5e-11 1
UNIPROTKB|E1BZL2 - symbol:CHMP1A "Uncharacterized protein... 152 5.8e-11 1
UNIPROTKB|F1NPS5 - symbol:CHMP1A "Uncharacterized protein... 152 5.8e-11 1
UNIPROTKB|E2RTK6 - symbol:CHMP1A "Uncharacterized protein... 152 5.8e-11 1
UNIPROTKB|Q9HD42 - symbol:CHMP1A "Charged multivesicular ... 152 5.8e-11 1
SGD|S000001524 - symbol:VPS24 "Subunit of the ESCRT-III c... 152 5.8e-11 1
TAIR|locus:2032607 - symbol:VPS46.2 species:3702 "Arabido... 151 7.4e-11 1
UNIPROTKB|G4MKS3 - symbol:MGG_06670 "Charged multivesicul... 143 5.6e-09 1
RGD|1306781 - symbol:Chmp2b "charged multivesicular body ... 132 7.6e-09 1
SGD|S000006435 - symbol:DID2 "Class E protein of the vacu... 139 8.7e-09 1
TAIR|locus:2075924 - symbol:VPS24.2 species:3702 "Arabido... 136 2.3e-08 1
POMBASE|SPAC9E9.14 - symbol:vps24 "ESCRT III complex subu... 133 2.0e-07 1
ASPGD|ASPL0000002845 - symbol:vps24 species:162425 "Emeri... 128 9.5e-07 1
UNIPROTKB|F8VUA2 - symbol:CHMP1A "Charged multivesicular ... 122 1.4e-06 1
UNIPROTKB|F8VVT7 - symbol:CHMP1A "Charged multivesicular ... 123 1.5e-06 1
UNIPROTKB|F5H875 - symbol:CHMP1A "Charged multivesicular ... 112 1.5e-06 1
TAIR|locus:2119956 - symbol:SNF7.1 species:3702 "Arabidop... 113 7.5e-05 1
UNIPROTKB|Q96FZ7 - symbol:CHMP6 "Charged multivesicular b... 112 7.5e-05 1
TAIR|locus:2051970 - symbol:SNF7.2 species:3702 "Arabidop... 108 0.00029 1
RGD|1565325 - symbol:Chmp6 "charged multivesicular body p... 107 0.00031 1
MGI|MGI:3583942 - symbol:Chmp6 "charged multivesicular bo... 105 0.00057 1
ZFIN|ZDB-GENE-040426-1374 - symbol:chmp5b "charged multiv... 105 0.00076 1
UNIPROTKB|Q148L0 - symbol:CHMP6 "Chromatin modifying prot... 104 0.00078 1
FB|FBgn0036740 - symbol:CG6259 species:7227 "Drosophila m... 105 0.00082 1
>TAIR|locus:2054612 [details] [associations]
symbol:VPS2.1 species:3702 "Arabidopsis thaliana"
[GO:0015031 "protein transport" evidence=IEA;IMP] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005771 "multivesicular body" evidence=IDA] [GO:0006944
"cellular membrane fusion" evidence=RCA] [GO:0009644 "response to
high light intensity" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] [GO:0048193 "Golgi vesicle transport" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0005771 GO:GO:0000815
eggNOG:COG5491 KO:K12191 OMA:MEWLFGK EMBL:AC006420 EMBL:AY090953
EMBL:AY088685 EMBL:AJ628449 EMBL:AJ628450 EMBL:AJ628451
EMBL:AJ628452 EMBL:AJ628453 EMBL:AJ628454 EMBL:AJ628455
EMBL:AJ628456 EMBL:AJ628457 EMBL:AJ628458 EMBL:AJ628459
EMBL:AJ628460 EMBL:AJ628461 EMBL:AJ628462 EMBL:AJ628463
EMBL:AJ628464 EMBL:AJ628465 EMBL:AJ628466 EMBL:AJ628467
EMBL:AJ628468 EMBL:AJ628469 EMBL:AJ628470 EMBL:AJ628471
EMBL:AJ628472 EMBL:AJ628473 EMBL:AJ628474 EMBL:AJ628475
EMBL:AJ628476 EMBL:AJ628477 EMBL:AJ628478 EMBL:AJ628479
EMBL:AJ628480 EMBL:AJ628481 EMBL:AJ628482 EMBL:AJ628483
EMBL:AJ628484 EMBL:AJ628485 EMBL:AJ628486 EMBL:AJ628487
EMBL:AJ628488 EMBL:AJ628489 EMBL:AJ628490 EMBL:AJ628491
EMBL:AJ628492 EMBL:AJ628493 EMBL:AJ628494 EMBL:AJ628495
EMBL:AJ628496 EMBL:AJ628497 EMBL:AJ628498 EMBL:AJ628499
EMBL:AJ628500 EMBL:AJ628501 EMBL:AJ628502 EMBL:AJ628503
EMBL:AJ628504 EMBL:AJ628505 EMBL:AJ628506 EMBL:AJ628507
EMBL:AJ628508 EMBL:AJ628509 EMBL:AJ628510 EMBL:AJ628511
EMBL:AJ628512 EMBL:AJ628513 EMBL:AJ628514 EMBL:AJ628515
EMBL:AJ628516 EMBL:AJ628517 EMBL:AJ628518 EMBL:AJ628519
EMBL:AJ628520 EMBL:AJ628521 EMBL:AJ628522 EMBL:AJ628523
EMBL:AJ628524 EMBL:AJ628525 EMBL:AJ628526 EMBL:AJ628527
EMBL:AJ628528 EMBL:AJ628529 EMBL:AJ628530 EMBL:AJ628531
EMBL:AJ628532 EMBL:AJ628533 EMBL:AJ628534 EMBL:AJ628535
EMBL:AJ628536 EMBL:AJ628537 EMBL:AJ628538 EMBL:AJ628539
EMBL:AJ628540 EMBL:AJ628541 EMBL:AJ628542 EMBL:AJ628543
EMBL:AJ628544 EMBL:AJ628545 EMBL:AJ628546 IPI:IPI00528753
PIR:D84478 RefSeq:NP_565336.1 UniGene:At.20774
ProteinModelPortal:Q9SKI2 SMR:Q9SKI2 IntAct:Q9SKI2 STRING:Q9SKI2
PaxDb:Q9SKI2 PRIDE:Q9SKI2 EnsemblPlants:AT2G06530.1 GeneID:815211
KEGG:ath:AT2G06530 TAIR:At2g06530 InParanoid:Q9SKI2
PhylomeDB:Q9SKI2 ProtClustDB:CLSN2688018 Genevestigator:Q9SKI2
Uniprot:Q9SKI2
Length = 225
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 187/224 (83%), Positives = 195/224 (87%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ +FGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLI+EIKK+AKQGQMGAVK
Sbjct: 2 MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVK 61
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 62 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 121
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
SLQKIMQEFERQNEKMEMV+EVM V+QVLDEIGIDINQELV
Sbjct: 122 SLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELV 181
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDD-GGIDSDLQARLDNLRRM 223
NAPS VA PA K KV QAEATG +D GGIDSDLQARLDNLR+M
Sbjct: 182 NAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRKM 225
>UNIPROTKB|E2RIU2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 CTD:27243 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AAEX03000690 RefSeq:XP_850536.1
ProteinModelPortal:E2RIU2 Ensembl:ENSCAFT00000003684 GeneID:476364
KEGG:cfa:476364 NextBio:20852037 Uniprot:E2RIU2
Length = 222
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 118/223 (52%), Positives = 157/223 (70%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV+
Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVR 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFERQ E M+M E+M V+QVLDE+G+ + EL
Sbjct: 121 QIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELS 180
Query: 181 NAPSSTVA-APAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
N PS+ + + A GK A+A A+ D D+DL+ RL NLRR
Sbjct: 181 NLPSTGGSLSVAASGKKAEAAASALVDA--DADLEERLKNLRR 221
>UNIPROTKB|O43633 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0016197 GO:GO:0016044
EMBL:CH471135 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ EMBL:AF042384
EMBL:AJ277113 EMBL:AY364248 EMBL:BT007298 EMBL:CR457002
EMBL:AK311974 EMBL:BC002502 IPI:IPI00004416 RefSeq:NP_055268.1
RefSeq:NP_940818.1 UniGene:Hs.12107 ProteinModelPortal:O43633
SMR:O43633 DIP:DIP-48533N IntAct:O43633 MINT:MINT-5005843
STRING:O43633 PhosphoSite:O43633 OGP:O43633 PaxDb:O43633
PeptideAtlas:O43633 PRIDE:O43633 DNASU:27243
Ensembl:ENST00000312547 GeneID:27243 KEGG:hsa:27243 UCSC:uc002qti.3
GeneCards:GC19M059062 HGNC:HGNC:30216 HPA:HPA041153 HPA:HPA042031
MIM:610893 neXtProt:NX_O43633 PharmGKB:PA142672111
InParanoid:O43633 OMA:MEWLFGK PhylomeDB:O43633 ChiTaRS:CHMP2A
GenomeRNAi:27243 NextBio:50143 Bgee:O43633 CleanEx:HS_CHMP2A
Genevestigator:O43633 GermOnline:ENSG00000130724 Uniprot:O43633
Length = 222
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 118/223 (52%), Positives = 157/223 (70%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV+
Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVR 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFERQ E M+M E+M V+QVLDE+G+ + EL
Sbjct: 121 QIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELS 180
Query: 181 NAPSSTVA-APAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
N PS+ + + A GK A+A A+ D D+DL+ RL NLRR
Sbjct: 181 NLPSTGGSLSVAAGGKKAEAAASALADA--DADLEERLKNLRR 221
>MGI|MGI:1916203 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1916203 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK EMBL:AK005267 EMBL:BC012230 IPI:IPI00119020
RefSeq:NP_081161.1 UniGene:Mm.295670 ProteinModelPortal:Q9DB34
SMR:Q9DB34 STRING:Q9DB34 PaxDb:Q9DB34 PRIDE:Q9DB34
Ensembl:ENSMUST00000005711 GeneID:68953 KEGG:mmu:68953
UCSC:uc009ffc.2 GeneTree:ENSGT00550000074737 InParanoid:Q9DB34
NextBio:328271 Bgee:Q9DB34 CleanEx:MM_CHMP2A Genevestigator:Q9DB34
GermOnline:ENSMUSG00000033916 Uniprot:Q9DB34
Length = 222
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 118/223 (52%), Positives = 157/223 (70%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV+
Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVR 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFERQ E M+M E+M V+QVLDE+G+ + EL
Sbjct: 121 QIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELS 180
Query: 181 NAPSSTVA-APAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
N PS+ + + A GK A+A A+ D D+DL+ RL NLRR
Sbjct: 181 NLPSTGGSLSVAAGGKKAEATASALADA--DADLEERLKNLRR 221
>RGD|1305050 [details] [associations]
symbol:Chmp2a "charged multivesicular body protein 2A"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1305050 GO:GO:0005829
GO:GO:0015031 eggNOG:COG5491 CTD:27243 HOGENOM:HOG000177218
HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
GeneTree:ENSGT00550000074737 EMBL:BC167093 EMBL:CH474090
IPI:IPI00360875 RefSeq:NP_001102376.1 UniGene:Rn.203178 SMR:B2RZB5
STRING:B2RZB5 Ensembl:ENSRNOT00000030931 GeneID:365191
KEGG:rno:365191 UCSC:RGD:1305050 NextBio:686824
Genevestigator:B2RZB5 Uniprot:B2RZB5
Length = 222
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 118/223 (52%), Positives = 157/223 (70%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV+
Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVR 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFERQ E M+M E+M V+QVLDE+G+ + EL
Sbjct: 121 QIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELS 180
Query: 181 NAPSSTVA-APAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
N PS+ + + A GK A+A A+ D D+DL+ RL NLRR
Sbjct: 181 NLPSTGGSLSVAAGGKKAEATASALADA--DADLEERLKNLRR 221
>DICTYBASE|DDB_G0292400 [details] [associations]
symbol:vps2B "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0010008
"endosome membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0292400 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0010008 EMBL:AAFI02000190 eggNOG:COG5491 KO:K12191
OMA:MEWLFGK RefSeq:XP_629585.1 ProteinModelPortal:Q54DB1
STRING:Q54DB1 EnsemblProtists:DDB0234176 GeneID:8628645
KEGG:ddi:DDB_G0292400 ProtClustDB:CLSZ2429397 Uniprot:Q54DB1
Length = 198
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 116/194 (59%), Positives = 146/194 (75%)
Query: 3 FLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVM 62
FLFGK+KTP E+LREN+R L+KS+REI+RER LQ QEKK+I +IKK AKQGQM + K+M
Sbjct: 2 FLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIM 61
Query: 63 AKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
AKDL+RTR+ I+KFY++K+QLQ VSLRIQTL+STQAM EAMKGVTKAM MNRQMNLP
Sbjct: 62 AKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQF 121
Query: 123 QKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNA 182
KIM EFE+Q++KM+M E+M +NQVLDEIGID+ +LV+A
Sbjct: 122 TKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDA 181
Query: 183 PSSTVAAPAVKGKV 196
P++ + A K +V
Sbjct: 182 PTTVGTSVASKHQV 195
>UNIPROTKB|Q3T0U5 [details] [associations]
symbol:CHMP2A "Chromatin modifying protein 2A" species:9913
"Bos taurus" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0015031 eggNOG:COG5491 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191 OrthoDB:EOG4HMJBJ
OMA:MEWLFGK GeneTree:ENSGT00550000074737 EMBL:DAAA02047921
EMBL:BC102258 IPI:IPI00705335 RefSeq:NP_001029722.1 UniGene:Bt.5624
STRING:Q3T0U5 Ensembl:ENSBTAT00000018429 GeneID:523847
KEGG:bta:523847 InParanoid:Q3T0U5 NextBio:20873841 Uniprot:Q3T0U5
Length = 222
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 118/223 (52%), Positives = 156/223 (69%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV+
Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVR 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFERQ E M+M E+M V QVLDE+G+ + EL
Sbjct: 121 QIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVAQVLDELGLSLTDELS 180
Query: 181 NAPSSTVA-APAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
N PS+ + + A GK A+A A+ D D+DL+ RL NLRR
Sbjct: 181 NLPSTGGSLSVAAGGKKAEATASALVDA--DADLEERLKNLRR 221
>ZFIN|ZDB-GENE-040426-2922 [details] [associations]
symbol:bc2 "putative breast adenocarcinoma marker"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-2922 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 HOGENOM:HOG000177218 HOVERGEN:HBG107298 KO:K12191
OrthoDB:EOG4HMJBJ EMBL:BC045320 IPI:IPI00492134 RefSeq:NP_998682.1
UniGene:Dr.75361 ProteinModelPortal:Q7ZW25 STRING:Q7ZW25
PRIDE:Q7ZW25 GeneID:798901 KEGG:dre:798901 InParanoid:Q7ZW25
NextBio:20933600 ArrayExpress:Q7ZW25 Uniprot:Q7ZW25
Length = 220
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 112/222 (50%), Positives = 156/222 (70%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP E+LR+N+R L++++R+++RERQ L+ QEKK+I++IKK AKQGQM AVK
Sbjct: 1 MESLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVK 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR ++KF +++ +Q VSL+IQTLKS +M +AMKGVTKAM MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFERQ+E M+M E+M V+QVLDE+G+ ++ EL
Sbjct: 121 QIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLSDELS 180
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
N P++ + GK A+ + T D D+DL+ RL+NLRR
Sbjct: 181 NLPATGGSLSVAAGKKAEPQPTLAD---ADADLEERLNNLRR 219
>WB|WBGene00012903 [details] [associations]
symbol:vps-2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0009792 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 EMBL:AL110485 RefSeq:NP_496717.1
ProteinModelPortal:Q9U2F6 SMR:Q9U2F6 IntAct:Q9U2F6 STRING:Q9U2F6
PaxDb:Q9U2F6 EnsemblMetazoa:Y46G5A.12.1 EnsemblMetazoa:Y46G5A.12.2
EnsemblMetazoa:Y46G5A.12.3 GeneID:174908 KEGG:cel:CELE_Y46G5A.12
UCSC:Y46G5A.12.1 CTD:174908 WormBase:Y46G5A.12 InParanoid:Q9U2F6
NextBio:885996 Uniprot:Q9U2F6
Length = 237
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 121/236 (51%), Positives = 155/236 (65%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M FLFG+RKTPAELLR+N+R L+K+IRE++RER ++ QEKK+I++IK AK+ QM +VK
Sbjct: 1 MDFLFGRRKTPAELLRQNQRALNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVK 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
VMAKDL+RTR I+KF +K+ +Q VSL++QTLKS AM AMKGVTKAM MNRQ+NLP
Sbjct: 61 VMAKDLVRTRRYIKKFIVMKANIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFE+Q+E M+M EVM VNQVLDE+GI + +E+
Sbjct: 121 QIQKIMMEFEKQSEIMDMKEEVMGDAIDDALGDAGDEEETDQIVNQVLDELGIQMGEEMA 180
Query: 181 NAPSSTVAAPA----VKGKVAQA--------EATGNDDGG--IDSDLQARLDNLRR 222
PS+ A + G+ A A G GG +D DLQARLD LRR
Sbjct: 181 GLPSAAGGLNAGGERIGGRQAVAAGGSGGAHHGAGGAGGGNDVDDDLQARLDQLRR 236
>ASPGD|ASPL0000001940 [details] [associations]
symbol:AN6898 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0043936 "asexual
sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0000815
"ESCRT III complex" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0015031 EMBL:BN001301 GO:GO:0000815 OMA:MEWLFGK GO:GO:0070676
EnsemblFungi:CADANIAT00007700 Uniprot:C8V2X5
Length = 226
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 112/223 (50%), Positives = 151/223 (67%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
+ + FGKR TPAE LR+++R LD++ RE++RER L+ QEKKLI +IKKSAK GQ+GA K
Sbjct: 4 VEWAFGKRMTPAERLRKHQRALDRTQRELDRERTKLENQEKKLIQDIKKSAKNGQIGACK 63
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+ AKDL+RTR I+KFY++++QLQ +SLRIQT++S + M ++MKG T +G MNRQMNLP
Sbjct: 64 IQAKDLVRTRRYIQKFYQMRTQLQAISLRIQTVRSNEQMMQSMKGATMLLGSMNRQMNLP 123
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+LQ+I EFER+N+ M+ E+M V +VLDEIG+D++Q L
Sbjct: 124 ALQRIAMEFERENDIMDQRQEMMDDAIDEATGIEGEEEEGEDIVKEVLDEIGVDLSQALG 183
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSD-LQARLDNLRR 222
PS +G+VAQA G G D D LQARLD+LRR
Sbjct: 184 ETPSGIQKESVSEGRVAQAIGAGGAGGASDDDDLQARLDSLRR 226
>UNIPROTKB|Q5ZHN1 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0031902 GO:GO:0015031
eggNOG:COG5491 EMBL:AJ721103 IPI:IPI00594797 RefSeq:NP_001074361.1
UniGene:Gga.7026 ProteinModelPortal:Q5ZHN1 STRING:Q5ZHN1
PRIDE:Q5ZHN1 GeneID:776036 KEGG:gga:776036 CTD:27243
HOGENOM:HOG000177218 HOVERGEN:HBG107298 InParanoid:Q5ZHN1 KO:K12191
OrthoDB:EOG4HMJBJ NextBio:20922661 Uniprot:Q5ZHN1
Length = 220
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 112/222 (50%), Positives = 149/222 (67%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M LFG+RKTP ELLR+N+R L +++RE++RERQ L+ QEKK+I +IKK AKQGQM AVK
Sbjct: 1 MDLLFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVK 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR ++KF +++ +Q VSL+IQTLKS +M AMKGVTKAM MNRQ+ LP
Sbjct: 61 IMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMKGVTKAMATMNRQLKLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKIM EFE+Q M+M E+M V+QVLDE+G+++ EL
Sbjct: 121 QIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLTDELA 180
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
P + A +G+ A+A A D D+DL+ RL NLRR
Sbjct: 181 TLPPPGGSLAAGEGRAAEAAAALAD---ADADLEERLKNLRR 219
>FB|FBgn0039402 [details] [associations]
symbol:vps2 "vps2" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014297 GO:GO:0015031 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 FlyBase:FBgn0039402 EMBL:BT003747
RefSeq:NP_651455.1 UniGene:Dm.10330 SMR:Q9VBI3 IntAct:Q9VBI3
MINT:MINT-1674416 STRING:Q9VBI3 EnsemblMetazoa:FBtr0084967
GeneID:43164 KEGG:dme:Dmel_CG14542 UCSC:CG14542-RA CTD:43164
InParanoid:Q9VBI3 GenomeRNAi:43164 NextBio:832507 Uniprot:Q9VBI3
Length = 256
Score = 496 (179.7 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 100/211 (47%), Positives = 146/211 (69%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M +LFGK+ +P E+LR+N+R L+K++R+++RER ++ QEKK+I++IKK AK+GQM AVK
Sbjct: 1 MDWLFGKKISPDEMLRKNQRALNKAMRDLDRERMKMEQQEKKIIADIKKMAKEGQMDAVK 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
+MAKDL+RTR +KF +K+ +Q VSL+IQTLKS M +AMKGVTKAM MNRQ+NLP
Sbjct: 61 IMAKDLVRTRRYAKKFMLMKANIQAVSLKIQTLKSQNTMAQAMKGVTKAMQNMNRQLNLP 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+QKI+Q+FE+Q+E M+M E++ V+QVLDE+G+ + ++L
Sbjct: 121 QIQKILQDFEKQSEMMDMKEEMINDAIDDAMEDEGDEEETDAVVSQVLDELGLQLGEQLG 180
Query: 181 NAPSSTVAAPAVKG---KVAQAEATGNDDGG 208
+ PS++ + G + AQA A G GG
Sbjct: 181 DLPSASGSLSIAGGAGAQKAQAVAAGGVGGG 211
Score = 52 (23.4 bits), Expect = 4.2e-51, Sum P(2) = 4.2e-51
Identities = 10/13 (76%), Positives = 12/13 (92%)
Query: 210 DSDLQARLDNLRR 222
D+DLQARLD LR+
Sbjct: 243 DADLQARLDKLRK 255
>SGD|S000001485 [details] [associations]
symbol:DID4 "Class E Vps protein of the ESCRT-III complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0000815 "ESCRT III complex" evidence=IDA] [GO:0045324 "late
endosome to vacuole transport" evidence=IPI] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000001485 GO:GO:0015031
EMBL:BK006944 GO:GO:0045324 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 OMA:MEWLFGK
GeneTree:ENSGT00550000074737 GO:GO:0043162 OrthoDB:EOG4WT0M1
GO:GO:0045053 EMBL:Z28002 PIR:S37812 RefSeq:NP_012924.2 PDB:2V6X
PDBsum:2V6X ProteinModelPortal:P36108 SMR:P36108 DIP:DIP-1916N
IntAct:P36108 MINT:MINT-404147 STRING:P36108 PaxDb:P36108
EnsemblFungi:YKL002W GeneID:853868 KEGG:sce:YKL002W CYGD:YKL002w
EvolutionaryTrace:P36108 NextBio:975133 Genevestigator:P36108
GermOnline:YKL002W GO:GO:0070676 Uniprot:P36108
Length = 232
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 99/225 (44%), Positives = 141/225 (62%)
Query: 3 FLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVM 62
++FGK TP E L++N+R L+++ RE+ERE++ L+ Q+KKL+SEIKKSAK GQ+ A KV
Sbjct: 6 WVFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQ 65
Query: 63 AKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 122
AKDL+RTR+ I+KF +K+QLQ +SLRIQ ++S+ M +M T + MNR MNLP L
Sbjct: 66 AKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQL 125
Query: 123 QKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXX-VNQVLDEIGIDINQELVN 181
Q+I EFE+Q++ M E M VN+VLDEIG+D+N +L +
Sbjct: 126 QRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDEDEEADEIVNKVLDEIGVDLNSQLQS 185
Query: 182 APSSTVA-APAVKGKVAQAEATGNDD---GGIDSDLQARLDNLRR 222
P + V+ AP + + E G G D DLQARL+ L++
Sbjct: 186 TPQNLVSNAPIAETAMGIPEPIGAGSEFHGNPDDDLQARLNTLKK 230
>CGD|CAL0003689 [details] [associations]
symbol:VPS2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0006623 "protein targeting to
vacuole" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0045053 "protein retention in Golgi apparatus"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0043328 "protein targeting to vacuole involved in
ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689 GO:GO:0006623
EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 100/227 (44%), Positives = 140/227 (61%)
Query: 5 FGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAK 64
FGK+ TP E LR+N+R L+K+ RE+ RE LQ QEKKLIS+IKKSAK GQ+ + K+ AK
Sbjct: 9 FGKKLTPQERLRKNQRALEKTQRELSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAK 68
Query: 65 DLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQK 124
DLIRT+ + KF +K+QLQ +SLRIQ+++S Q M +M+ T+ +G MNR MNLP L +
Sbjct: 69 DLIRTKSYVSKFTSMKTQLQAISLRIQSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSR 128
Query: 125 IMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQ----VLDEIGIDINQELV 180
I QEF ++++ M+ E M V++ VLDEIG+D+N L
Sbjct: 129 IAQEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLK 188
Query: 181 NAPSSTVAA---PAVKGKVAQAE-ATGNDDGGIDSD-LQARLDNLRR 222
+ P+ A A + +VA+A A G D D LQARLD+L++
Sbjct: 189 DTPTGINAGNIEQADRARVAEAVGANGASSHDADEDDLQARLDSLKK 235
>UNIPROTKB|Q5A501 [details] [associations]
symbol:VPS2 "Putative uncharacterized protein DID4"
species:237561 "Candida albicans SC5314" [GO:0000815 "ESCRT III
complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0003689
GO:GO:0006623 EMBL:AACQ01000063 EMBL:AACQ01000062 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12191 RefSeq:XP_716784.1
RefSeq:XP_716844.1 ProteinModelPortal:Q5A501 STRING:Q5A501
GeneID:3641513 GeneID:3641546 KEGG:cal:CaO19.8560
KEGG:cal:CaO19.945 Uniprot:Q5A501
Length = 235
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 100/227 (44%), Positives = 140/227 (61%)
Query: 5 FGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAK 64
FGK+ TP E LR+N+R L+K+ RE+ RE LQ QEKKLIS+IKKSAK GQ+ + K+ AK
Sbjct: 9 FGKKLTPQERLRKNQRALEKTQRELSREITKLQQQEKKLISDIKKSAKSGQISSAKIQAK 68
Query: 65 DLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQK 124
DLIRT+ + KF +K+QLQ +SLRIQ+++S Q M +M+ T+ +G MNR MNLP L +
Sbjct: 69 DLIRTKSYVSKFTSMKTQLQAISLRIQSVRSNQQMAMSMRDATRVLGGMNRSMNLPQLSR 128
Query: 125 IMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQ----VLDEIGIDINQELV 180
I QEF ++++ M+ E M V++ VLDEIG+D+N L
Sbjct: 129 IAQEFAKESDMMDQKQEFMDDAIDDAMAMDEDELGEEEQVDEILSKVLDEIGVDLNTTLK 188
Query: 181 NAPSSTVAA---PAVKGKVAQAE-ATGNDDGGIDSD-LQARLDNLRR 222
+ P+ A A + +VA+A A G D D LQARLD+L++
Sbjct: 189 DTPTGINAGNIEQADRARVAEAVGANGASSHDADEDDLQARLDSLKK 235
>POMBASE|SPAC4F8.01 [details] [associations]
symbol:did4 "ESCRT III complex subunit Did4" species:4896
"Schizosaccharomyces pombe" [GO:0000815 "ESCRT III complex"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900 "membrane
budding" evidence=IC] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC4F8.01 EMBL:CU329670
GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491 HOGENOM:HOG000177218
KO:K12191 OMA:MEWLFGK GO:GO:0006900 PIR:T38831 RefSeq:NP_593871.3
ProteinModelPortal:O14177 STRING:O14177 EnsemblFungi:SPAC4F8.01.1
GeneID:2543521 KEGG:spo:SPAC4F8.01 OrthoDB:EOG4WT0M1
NextBio:20804531 GO:GO:0045053 Uniprot:O14177
Length = 210
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 78/192 (40%), Positives = 121/192 (63%)
Query: 2 SFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
S+LFG K+P E LR ++R L ++ RE++RER L +E+ LI EIK SAK G GA ++
Sbjct: 5 SWLFGGGKSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARI 64
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
A+DL+R R+ +K K+QLQ +SLR+QT+++++ M ++M+G T+ + MN+ MN+P+
Sbjct: 65 QARDLMRLRNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPA 124
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+ +I Q+FER+NE ME E M VN+VLDEIG+D++Q L +
Sbjct: 125 MARITQQFERENEIMEQRQE-MIDENMDDALEEDDEEEADELVNKVLDEIGVDLSQGLPD 183
Query: 182 APSSTVAAPAVK 193
A + P +K
Sbjct: 184 AATQIGTVPELK 195
>UNIPROTKB|I3LSS2 [details] [associations]
symbol:CHMP2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0015031 GeneTree:ENSGT00550000074737
Ensembl:ENSSSCT00000030728 OMA:FITMRAN Uniprot:I3LSS2
Length = 167
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 81/166 (48%), Positives = 106/166 (63%)
Query: 58 AVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 117
AV++MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+
Sbjct: 3 AVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQL 62
Query: 118 NLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQ 177
LP +QKIM EFERQ E M+M E+M V QVLDE+G+ +
Sbjct: 63 KLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVAQVLDELGLSLTD 122
Query: 178 ELVNAPSSTVA-APAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
EL N PS+ + + A GK A+A A+ D D+DL+ RL NLRR
Sbjct: 123 ELSNLPSTGGSLSVAASGKKAEAAASALVDA--DADLEERLKNLRR 166
>TAIR|locus:2024107 [details] [associations]
symbol:VPS2.3 "vacuolar protein sorting-associated
protein 2.3" species:3702 "Arabidopsis thaliana" [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0000815 "ESCRT III complex"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC003027 GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177218 KO:K12192 OMA:DPQKTLK
EMBL:AY052238 EMBL:AY060501 IPI:IPI00517467 PIR:D86170
RefSeq:NP_563696.1 UniGene:At.26425 ProteinModelPortal:Q941D5
SMR:Q941D5 IntAct:Q941D5 PRIDE:Q941D5 EnsemblPlants:AT1G03950.1
GeneID:839362 KEGG:ath:AT1G03950 TAIR:At1g03950 InParanoid:Q941D5
PhylomeDB:Q941D5 ProtClustDB:CLSN2687652 Genevestigator:Q941D5
Uniprot:Q941D5
Length = 210
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 82/218 (37%), Positives = 126/218 (57%)
Query: 4 LFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMA 63
+F K+ P E+LRE+KR + ++ R IE+E LQ++EKKL+ EIK++AK G GA K++A
Sbjct: 3 IFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILA 62
Query: 64 KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
+ LIR R QI ++Q++G++ Q + + ++ M+G TKAM M++ M+
Sbjct: 63 RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQA 122
Query: 124 KIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP 183
K+M+EF++Q+ +M+M TE+M NQVLDEIGIDI +L +AP
Sbjct: 123 KVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSAP 182
Query: 184 SSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
KGK+ +A GID +L+ RL LR
Sbjct: 183 ---------KGKIGGKKAEDVGSSGID-ELEKRLAALR 210
>TAIR|locus:2163396 [details] [associations]
symbol:VPS2.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0015031
EMBL:AB017065 EMBL:AB024024 GO:GO:0000815 eggNOG:COG5491
HOGENOM:HOG000177218 KO:K12191 EMBL:AK227410 EMBL:BT005848
IPI:IPI00548186 IPI:IPI00892046 RefSeq:NP_001119371.1
RefSeq:NP_199269.1 UniGene:At.30067 ProteinModelPortal:Q0WTY4
IntAct:Q0WTY4 STRING:Q0WTY4 PaxDb:Q0WTY4 PRIDE:Q0WTY4
EnsemblPlants:AT5G44560.1 GeneID:834483 KEGG:ath:AT5G44560
TAIR:At5g44560 InParanoid:Q0WTY4 OMA:APKGRIG PhylomeDB:Q0WTY4
ProtClustDB:CLSN2916725 Genevestigator:Q0WTY4 Uniprot:Q0WTY4
Length = 222
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 77/221 (34%), Positives = 125/221 (56%)
Query: 4 LFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMA 63
+F K+ TP + LR +KR + + R IERE LQ +EK+L++EIKK+AK G A K++A
Sbjct: 3 IFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILA 62
Query: 64 KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
+ L+R R QI ++Q++GV+ Q L ++ ++ MKG TKAM MN+QM P+ Q
Sbjct: 63 RQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQM-APTKQ 121
Query: 124 -KIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNA 182
K++++F++Q+ +++M E+M NQVLDEIG+ + +L +A
Sbjct: 122 AKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSA 181
Query: 183 PSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLRRM 223
P +A + A N + +L+ RL +LRR+
Sbjct: 182 PKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLRRI 222
>ZFIN|ZDB-GENE-040426-2539 [details] [associations]
symbol:chmp2bb "chromatin modifying protein 2Bb"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2539
GO:GO:0015031 GeneTree:ENSGT00550000074737 EMBL:CR762462
IPI:IPI00493945 Ensembl:ENSDART00000125682 ArrayExpress:F1QLN0
Bgee:F1QLN0 Uniprot:F1QLN0
Length = 263
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 74/215 (34%), Positives = 118/215 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E + L + R+I R+R L+ QEK+L EIKK AK G A K
Sbjct: 50 MTSLF-KKKTVDDVIKEQNKELRGTQRQIARDRTALEKQEKQLEMEIKKMAKTGNRDACK 108
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L++ R Q + Y + S++ +S + + + S M AM TK M +N++M+
Sbjct: 109 VLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMKMAGAMATTTKTMQAVNKKMDPK 168
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ +Q F+++ KM+M E+M VNQVLDEIGI+I+ ++
Sbjct: 169 KTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMA 228
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
+APS+ P+ A A+A G D I+ L+A
Sbjct: 229 HAPSAARKTPSA----ATAKADGISDEDIERQLKA 259
>UNIPROTKB|F1NR65 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005739 GO:GO:0005634 GO:GO:0015031
GeneTree:ENSGT00550000074737 OMA:DPQKTLK IPI:IPI00591923
EMBL:AADN02042324 Ensembl:ENSGALT00000024990 Uniprot:F1NR65
Length = 214
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 73/215 (33%), Positives = 116/215 (53%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A K
Sbjct: 1 MASLF-KKKTVDDIIKEQNRELRGTQRTITRDRAALEKQEKQLELEIKKMAKTGNKEACK 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L++ R Q + Y + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ P+ + ++A+ D I+ L+A
Sbjct: 180 KAPSAARGLPSA----STSKASTISDEEIERQLKA 210
>DICTYBASE|DDB_G0290087 [details] [associations]
symbol:vps2A "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0290087 GO:GO:0015031 GenomeReviews:CM000154_GR
GO:GO:0000815 eggNOG:COG5491 KO:K12191 EMBL:AAFI02000152
RefSeq:XP_635908.2 ProteinModelPortal:Q54GK9 STRING:Q54GK9
EnsemblProtists:DDB0234032 GeneID:8627474 KEGG:ddi:DDB_G0290087
OMA:QDMFEDD Uniprot:Q54GK9
Length = 206
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 61/143 (42%), Positives = 90/143 (62%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
MSF G +KTP + L+++KR L K RE++RE L+ E++ I +IK+ AK G+ K
Sbjct: 1 MSFFGGNKKTPEQELKDSKRELSKGQREMDRELNRLKIVEQEYIGKIKQLAKAGRNDEAK 60
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
MA DL++ R Q+E+ K+ L VS + T+K+ Q M AM TKAM MN+Q +L
Sbjct: 61 RMANDLVKLRGQMERMRATKTTLSAVSTKTTTIKANQTMANAMASATKAMSTMNKQTDLV 120
Query: 121 SLQKIMQEFERQNEKMEMVTEVM 143
LQK M E+E+Q +++EM E+M
Sbjct: 121 QLQKTMMEYEKQTQRVEMTEEMM 143
>UNIPROTKB|Q5F3A2 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628 KO:K12192
OrthoDB:EOG469QW1 EMBL:AJ851748 IPI:IPI00591923
RefSeq:NP_001025963.1 UniGene:Gga.9706 ProteinModelPortal:Q5F3A2
STRING:Q5F3A2 GeneID:418461 KEGG:gga:418461 InParanoid:Q5F3A2
NextBio:20821640 Uniprot:Q5F3A2
Length = 214
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 72/215 (33%), Positives = 116/215 (53%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QE++L EIKK AK G A K
Sbjct: 1 MASLF-KKKTVDDIIKEQNRELRGTQRTITRDRAALEKQERQLELEIKKMAKTGNKEACK 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L++ R Q + Y + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ P+ + ++A+ D I+ L+A
Sbjct: 180 KAPSAARGLPSA----STSKASTISDEEIERQLKA 210
>ZFIN|ZDB-GENE-070628-3 [details] [associations]
symbol:chmp2ba "chromatin modifying protein 2Ba"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-070628-3 GO:GO:0015031 eggNOG:COG5491
HOGENOM:HOG000177218 GeneTree:ENSGT00550000074737
HOVERGEN:HBG102628 KO:K12192 OrthoDB:EOG469QW1 EMBL:CR361551
IPI:IPI00509438 RefSeq:NP_001116769.1 UniGene:Dr.144266
Ensembl:ENSDART00000055866 GeneID:569532 KEGG:dre:569532
OMA:SADEEEC NextBio:20889725 Uniprot:B0UXH0
Length = 216
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 68/215 (31%), Positives = 116/215 (53%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E + L + R+I R+R L+ QE+++ EIKK AK G A K
Sbjct: 1 MASLF-KKKTVDDIIKEQSKELRGTQRQITRDRAALERQERQMEMEIKKMAKTGNREACK 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
++AK L++ R Q + Y + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 ILAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQTVNKRMDPK 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ+F+++N KM M +++ VNQVLDEIGI+I+ ++V
Sbjct: 120 KTLQTMQDFQKENMKMGMTEDMLNSTLDEIFDESADEEECQDIVNQVLDEIGIEISGKMV 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ P A+++ D I+ L+A
Sbjct: 180 RAPSTGKILPGASP--AKSKTATISDAEIERQLKA 212
>FB|FBgn0035589 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
EMBL:AE014296 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
eggNOG:NOG268821 KO:K12192 OMA:DPQKTLK EMBL:AY061433
RefSeq:NP_647947.1 UniGene:Dm.850 SMR:Q9VRJ5 STRING:Q9VRJ5
EnsemblMetazoa:FBtr0077166 GeneID:38599 KEGG:dme:Dmel_CG4618
UCSC:CG4618-RA FlyBase:FBgn0035589 InParanoid:Q9VRJ5
OrthoDB:EOG4MPG6C GenomeRNAi:38599 NextBio:809457 Uniprot:Q9VRJ5
Length = 212
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 62/192 (32%), Positives = 107/192 (55%)
Query: 4 LFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMA 63
+FGK+ T E REN R L K+ R+IERER+ ++ +E+KL EI+++A G A +++A
Sbjct: 5 IFGKKPTVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRRNAAAGNNDACRILA 64
Query: 64 KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
K L+ R Q + Y ++Q + + + + + A+ EAM K MG+MN+ M ++
Sbjct: 65 KQLVEIRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAIG 124
Query: 124 KIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP 183
+ +++F+ N KMEM E++ VN+VLDEIGI+I+ ++ + P
Sbjct: 125 ETVRQFQAANMKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIP 184
Query: 184 SSTVAAPAVKGK 195
++ + GK
Sbjct: 185 ATGSSDFETSGK 196
>UNIPROTKB|Q9UQN3 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0008219 "cell death" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IPI] [GO:0005829 "cytosol" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
[GO:0016197 "endosomal transport" evidence=TAS] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0005739 GO:GO:0005634 GO:GO:0031902
GO:GO:0015031 GO:GO:0008219 GO:GO:0016197 Orphanet:803
GO:GO:0016044 HOGENOM:HOG000177218 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK EMBL:AF151842
EMBL:AL080122 EMBL:AK296072 EMBL:CR533456 EMBL:AK222654
EMBL:AC123511 EMBL:AC130885 EMBL:BC001553 IPI:IPI00550181
PIR:T12468 RefSeq:NP_001231573.1 RefSeq:NP_054762.2
UniGene:Hs.476930 PDB:2JQK PDBsum:2JQK ProteinModelPortal:Q9UQN3
SMR:Q9UQN3 IntAct:Q9UQN3 MINT:MINT-1430090 STRING:Q9UQN3
PhosphoSite:Q9UQN3 DMDM:73917746 PaxDb:Q9UQN3 PRIDE:Q9UQN3
DNASU:25978 Ensembl:ENST00000263780 Ensembl:ENST00000471660
GeneID:25978 KEGG:hsa:25978 UCSC:uc003dqp.4 GeneCards:GC03P087360
HGNC:HGNC:24537 HPA:HPA035069 MIM:600795 MIM:609512 MIM:614696
neXtProt:NX_Q9UQN3 Orphanet:275864 PharmGKB:PA142672112
InParanoid:Q9UQN3 PhylomeDB:Q9UQN3 ChiTaRS:CHMP2B
EvolutionaryTrace:Q9UQN3 GenomeRNAi:25978 NextBio:47630
ArrayExpress:Q9UQN3 Bgee:Q9UQN3 CleanEx:HS_CHMP2B
Genevestigator:Q9UQN3 GermOnline:ENSG00000083937 Uniprot:Q9UQN3
Length = 213
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 73/215 (33%), Positives = 118/215 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A K
Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACK 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L+ R Q + + + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ + P+ + ++AT +D+ I+ L+A
Sbjct: 180 KAPSAARSLPSA----STSKATISDEE-IERQLKA 209
>UNIPROTKB|E2R417 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737 CTD:25978
KO:K12192 OMA:DPQKTLK EMBL:AAEX03016386 EMBL:AAEX03016387
RefSeq:XP_544799.3 ProteinModelPortal:E2R417 SMR:E2R417
Ensembl:ENSCAFT00000012434 GeneID:487675 KEGG:cfa:487675
NextBio:20861232 Uniprot:E2R417
Length = 213
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/215 (33%), Positives = 118/215 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A +
Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACR 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L+ R Q + + + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ + P+ + ++AT +D+ I+ L+A
Sbjct: 180 KAPSAARSLPSA----STSKATISDEE-IERQLKA 209
>UNIPROTKB|F2Z5Q1 [details] [associations]
symbol:CHMP2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005739 GO:GO:0005634
GO:GO:0015031 GeneTree:ENSGT00550000074737 OMA:DPQKTLK
EMBL:CU633644 ProteinModelPortal:F2Z5Q1 SMR:F2Z5Q1
Ensembl:ENSSSCT00000013128 Uniprot:F2Z5Q1
Length = 213
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/215 (33%), Positives = 118/215 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A +
Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACR 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L+ R Q + + + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ + P+ + ++AT +D+ I+ L+A
Sbjct: 180 KAPSAARSLPSA----STSKATISDEE-IERQLKA 209
>MGI|MGI:1916192 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=ISO] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1916192 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 CTD:25978 eggNOG:NOG268821
HOVERGEN:HBG102628 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
ChiTaRS:CHMP2B EMBL:AK004506 EMBL:AK084111 EMBL:BC042626
EMBL:BC055809 IPI:IPI00222386 RefSeq:NP_081155.1 UniGene:Mm.432944
ProteinModelPortal:Q8BJF9 SMR:Q8BJF9 STRING:Q8BJF9
PhosphoSite:Q8BJF9 PaxDb:Q8BJF9 PRIDE:Q8BJF9
Ensembl:ENSMUST00000004965 GeneID:68942 KEGG:mmu:68942
UCSC:uc007zqj.1 InParanoid:Q8BJF9 NextBio:328237 Bgee:Q8BJF9
CleanEx:MM_CHMP2B Genevestigator:Q8BJF9
GermOnline:ENSMUSG00000004843 Uniprot:Q8BJF9
Length = 213
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 72/215 (33%), Positives = 118/215 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A +
Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACR 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L+ R Q + + + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ + P+ + ++AT +D+ I+ L+A
Sbjct: 180 KAPSAARSLPSA----STSKATISDEE-IERQLKA 209
>UNIPROTKB|Q3SX42 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0031902 GO:GO:0015031 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 EMBL:BC104514 IPI:IPI00696266
RefSeq:NP_001030549.1 UniGene:Bt.19768 ProteinModelPortal:Q3SX42
STRING:Q3SX42 Ensembl:ENSBTAT00000010436 GeneID:615954
KEGG:bta:615954 CTD:25978 eggNOG:NOG268821 HOVERGEN:HBG102628
InParanoid:Q3SX42 KO:K12192 OMA:DPQKTLK OrthoDB:EOG469QW1
NextBio:20899880 Uniprot:Q3SX42
Length = 213
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 71/215 (33%), Positives = 118/215 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A +
Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACR 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L+ R Q + + + S++ +S + + + S M AM K M +N++M+
Sbjct: 60 VLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQ 119
Query: 121 SLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
+ MQ F+++N KMEM E++ VNQVLDEIGI+I+ ++
Sbjct: 120 KTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMA 179
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
APS+ + P+ + +++T +D+ I+ L+A
Sbjct: 180 KAPSAARSLPSA----STSKSTISDEE-IERQLKA 209
>WB|WBGene00007216 [details] [associations]
symbol:C01A2.4 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000177218
GeneTree:ENSGT00550000074737 KO:K12192 EMBL:Z81029 PIR:T18795
RefSeq:NP_493357.2 ProteinModelPortal:O02208 SMR:O02208
IntAct:O02208 STRING:O02208 PaxDb:O02208 EnsemblMetazoa:C01A2.4.1
EnsemblMetazoa:C01A2.4.2 GeneID:182050 KEGG:cel:CELE_C01A2.4
UCSC:C01A2.4 CTD:182050 WormBase:C01A2.4 InParanoid:O02208
OMA:EVERNRT NextBio:916198 Uniprot:O02208
Length = 207
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 77/218 (35%), Positives = 110/218 (50%)
Query: 4 LFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMA 63
+F K P EL R NKR L K+ R++E +R+ + +EK+L EIKK A +G A + +A
Sbjct: 3 IFSK-PDPKELERANKRELRKTNRDLESDRRQMDRREKELEQEIKKLAAKGHNDAARHLA 61
Query: 64 KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
K L++ R+Q K + +++ GV + ++S MG AM K M MN QM L +
Sbjct: 62 KQLVQLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAMGTTVKTMKAMNAQMPLEKVA 121
Query: 124 KIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP 183
M+EF+ EKM + E+M VNQVLDEIGI++N +L N P
Sbjct: 122 ANMREFQMAQEKMGLTEEMMNDTLDSILDAPGDADEQDAIVNQVLDEIGIEMNSKLANVP 181
Query: 184 SSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
A P A A+ D DL+A+L LR
Sbjct: 182 ----ALPTKVSSTAPAD--------FD-DLEAQLARLR 206
>TAIR|locus:2172686 [details] [associations]
symbol:VPS24.1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=RCA]
InterPro:IPR005024 Pfam:PF03357 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AB005243
EMBL:AY054614 EMBL:AY128742 EMBL:AF083749 EMBL:AK220831
IPI:IPI00546218 RefSeq:NP_197686.1 UniGene:At.8736
ProteinModelPortal:Q9FFB3 SMR:Q9FFB3 IntAct:Q9FFB3 STRING:Q9FFB3
PaxDb:Q9FFB3 PRIDE:Q9FFB3 EnsemblPlants:AT5G22950.1 GeneID:832359
KEGG:ath:AT5G22950 TAIR:At5g22950 InParanoid:Q9FFB3 OMA:MKIVNNL
PhylomeDB:Q9FFB3 ProtClustDB:CLSN2686097 Genevestigator:Q9FFB3
Uniprot:Q9FFB3
Length = 229
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 56/216 (25%), Positives = 106/216 (49%)
Query: 11 PAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTR 70
P +LLR+ +R L + R IER+ + +Q +E+ + IK++AK+ M + K +AK+++ +R
Sbjct: 14 PKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSR 73
Query: 71 HQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEF 129
+ + Y+ K+Q+ +S+ + +++ + +G K + M +N M P + MQEF
Sbjct: 74 RTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSA-EVMKLVNNLMKAPQMAATMQEF 132
Query: 130 ERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQEL-VNAPSSTVA 188
++ K ++ E + V++VL I + EL V +
Sbjct: 133 SKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPVAVRKERIK 192
Query: 189 APAVKGKVAQAE---ATGNDDGGIDSDLQARLDNLR 221
PA K ++ E A G DD +++ARL +R
Sbjct: 193 VPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVR 228
>DICTYBASE|DDB_G0284769 [details] [associations]
symbol:vps24 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0000815 "ESCRT III complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0284769 GenomeReviews:CM000153_GR EMBL:AAFI02000071
GO:GO:0015031 GO:GO:0000815 eggNOG:COG5491 KO:K12193 OMA:MSKEMMK
RefSeq:XP_638395.1 ProteinModelPortal:Q54P63 STRING:Q54P63
PRIDE:Q54P63 EnsemblProtists:DDB0234036 GeneID:8624764
KEGG:ddi:DDB_G0284769 InParanoid:Q54P63 ProtClustDB:CLSZ2437297
Uniprot:Q54P63
Length = 207
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 53/185 (28%), Positives = 94/185 (50%)
Query: 3 FLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVM 62
F F K+ TP EL+++ KR L + R ++ + + + QEKK + IK+ K G + K +
Sbjct: 2 FSFLKKPTPEELVKKWKRELRREDRGLDTQLRAIDMQEKKTVRMIKERVKAGDQKSAKTL 61
Query: 63 AKDLIRTRHQIEKFYKLKSQLQGVSLRIQT-LKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
AK+++ +R E+ Y K+Q+ VS+++Q+ L T+ G K T+ M MN + LP
Sbjct: 62 AKEIVNSRKAKERIYTAKAQMNSVSMQLQSNLAMTKVQGNLAKS-TEIMKMMNDLIKLPE 120
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
L K+M + K ++ E++ VN+++DEI + ++ +
Sbjct: 121 LNKVMMAMGSEMTKAGIMEEMISDVFDMQGEDLEEEAEME--VNKIMDEILVS-GPQVSS 177
Query: 182 APSST 186
AP T
Sbjct: 178 APLET 182
>WB|WBGene00020866 [details] [associations]
symbol:T27F7.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0015031
GO:GO:0018996 GO:GO:0040011 GO:GO:0040018 GO:GO:0019915
eggNOG:COG5491 GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
KO:K12193 OMA:MSKEMMK EMBL:FO081509 NextBio:881441
RefSeq:NP_494919.1 ProteinModelPortal:Q9GYK4 SMR:Q9GYK4
IntAct:Q9GYK4 STRING:Q9GYK4 PaxDb:Q9GYK4 EnsemblMetazoa:T27F7.1.1
EnsemblMetazoa:T27F7.1.2 EnsemblMetazoa:T27F7.1.3 GeneID:173863
KEGG:cel:CELE_T27F7.1 UCSC:T27F7.1.1 CTD:173863 WormBase:T27F7.1
InParanoid:Q9GYK4 Uniprot:Q9GYK4
Length = 208
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 42/140 (30%), Positives = 84/140 (60%)
Query: 4 LFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMA 63
LFGK+K P E +RE +R + + +R ++R+ +Q +E+K+ EIK++AK+G ++A
Sbjct: 3 LFGKKKDPKEEVRELQRKMRQEMRSLDRQVYSIQREEQKVTKEIKEAAKKGDKDVCLILA 62
Query: 64 KDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQ 123
K +I++R I K + K+Q+ V + +Q +T M +++ T+ M M + + +P +
Sbjct: 63 KSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQKSTEVMKSMQQLVKVPEIM 122
Query: 124 KIMQEFERQNEKMEMVTEVM 143
K M+E + K+ ++ E++
Sbjct: 123 KTMREMSAEMMKLGIIEEMI 142
>ZFIN|ZDB-GENE-040426-2600 [details] [associations]
symbol:chmp3 "charged multivesicular body protein
3" species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2600
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:BC066696 IPI:IPI00491816 RefSeq:NP_998485.1 UniGene:Dr.48763
ProteinModelPortal:Q6NY88 SMR:Q6NY88 STRING:Q6NY88 PRIDE:Q6NY88
Ensembl:ENSDART00000055487 GeneID:406621 KEGG:dre:406621
InParanoid:Q6NY88 NextBio:20818164 Bgee:Q6NY88 Uniprot:Q6NY88
Length = 221
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 59/222 (26%), Positives = 108/222 (48%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P +L+ E + K +R I+R+ + +Q +E+K+ IK +AK+GQ +
Sbjct: 3 LFGKTQEKPPKDLINEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCII 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++I+++ I K Y K+Q+ V L ++ S + A++ T+ M M + +P
Sbjct: 63 LAKEMIQSKRAINKLYASKAQMNSVLLSMKNQLSVLRVAGALQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M++ ++ K ++ E++ V+++L EI L
Sbjct: 123 IQATMRDLSKEMMKAGIIEEMLEDTLEGMDDEEEMEEAAEAEVDKILFEITAGA---LGK 179
Query: 182 APSST--VAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS + P G A E ++ I+ ++Q+RL LR
Sbjct: 180 APSKVTDLPDPVAIGATAAPEEESEEEEEIE-EMQSRLAALR 220
>RGD|708556 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10116 "Rattus norvegicus" [GO:0000815 "ESCRT III complex"
evidence=IC] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IMP]
[GO:0005769 "early endosome" evidence=IDA] [GO:0005770 "late
endosome" evidence=IDA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030496 "midbody" evidence=IDA] [GO:0031902 "late
endosome membrane" evidence=IEA] [GO:0051036 "regulation of
endosome size" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
RGD:708556 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0005770
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 GO:GO:0000815
eggNOG:COG5491 CTD:51652 GeneTree:ENSGT00550000074896
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AY150169 IPI:IPI00192445 RefSeq:NP_758834.1
UniGene:Rn.162751 ProteinModelPortal:Q8CGS4 SMR:Q8CGS4
STRING:Q8CGS4 PhosphoSite:Q8CGS4 Ensembl:ENSRNOT00000010253
GeneID:282834 KEGG:rno:282834 UCSC:RGD:708556 InParanoid:Q8CGS4
NextBio:624897 Genevestigator:Q8CGS4 GermOnline:ENSRNOG00000007356
Uniprot:Q8CGS4
Length = 223
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 58/223 (26%), Positives = 106/223 (47%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V
Sbjct: 3 LFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVV 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 63 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 123 IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGA---LGK 179
Query: 182 APSSTVAA---PAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS A P G +A +E DD +Q+RL LR
Sbjct: 180 APSKVTDALPEPEPAGAMAASEGDEEDDEEDLEAMQSRLATLR 222
>FB|FBgn0036805 [details] [associations]
symbol:Chmp1 "Chmp1" species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014296 GO:GO:0015031 eggNOG:COG5491 KO:K12197
GeneTree:ENSGT00550000074957 OMA:AKMATIT EMBL:AY060798
RefSeq:NP_649051.3 UniGene:Dm.3851 STRING:Q95SH2
EnsemblMetazoa:FBtr0075092 GeneID:40036 KEGG:dme:Dmel_CG4108
UCSC:CG4108-RA CTD:40036 FlyBase:FBgn0036805 InParanoid:Q95SH2
OrthoDB:EOG4GTHW3 GenomeRNAi:40036 NextBio:816669 Uniprot:Q95SH2
Length = 203
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 45/178 (25%), Positives = 91/178 (51%)
Query: 25 SIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQ 84
+++E+ER + + +EK ++ KK+ ++G M ++ A++ IR ++Q + ++ +++
Sbjct: 16 AVKELERNSKKCEKEEKLEKAKAKKAIQKGNMDVARIHAENAIRQKNQAVNYLRMSARVD 75
Query: 85 GVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMX 144
V+ R+Q+ +T+ + +M GV KAM + MNL + +M++FE Q E +++ + VM
Sbjct: 76 AVASRVQSALTTRKVTGSMAGVVKAMDAAMKGMNLEKISSLMEKFESQFEDLDVQSSVME 135
Query: 145 XXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEAT 202
+ QV DE G+++N EL + S + Q E T
Sbjct: 136 GTMSDTVTTSVPQGDVDNLLQQVADEAGLELNMELPSGVQSQSVGASTAVSQEQDELT 193
>UNIPROTKB|Q58CS7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:COG5491
EMBL:BT021870 EMBL:BC114072 IPI:IPI00688889 RefSeq:NP_001030223.2
UniGene:Bt.28232 ProteinModelPortal:Q58CS7 SMR:Q58CS7 STRING:Q58CS7
Ensembl:ENSBTAT00000018071 GeneID:507722 KEGG:bta:507722 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 InParanoid:Q58CS7 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB NextBio:20868194 Uniprot:Q58CS7
Length = 222
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V
Sbjct: 3 LFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVV 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 63 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 123 IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGA---LGK 179
Query: 182 APSSTVAA---PAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS A P G +A +E ++ +++ +Q+RL LR
Sbjct: 180 APSKVTDALPEPEPLGAMAASEDEEEEEEALEA-MQSRLATLR 221
>UNIPROTKB|Q9Y3E7 [details] [associations]
symbol:CHMP3 "Charged multivesicular body protein 3"
species:9606 "Homo sapiens" [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0006915 EMBL:CH471053 GO:GO:0031902 GO:GO:0015031
GO:GO:0016197 GO:GO:0007049 GO:GO:0000910 GO:GO:0005546
GO:GO:0008333 GO:GO:0030496 GO:GO:0005769 GO:GO:0051036
GO:GO:0016044 EMBL:AC064848 eggNOG:COG5491 CTD:51652
HOGENOM:HOG000177219 HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK
OrthoDB:EOG4VT5ZB EMBL:AF219226 EMBL:AY364249 EMBL:AF151907
EMBL:AK290725 EMBL:AK294389 EMBL:AK312353 EMBL:AK315835
EMBL:AC015971 EMBL:AC068288 EMBL:BC004419 IPI:IPI00100673
IPI:IPI00478935 IPI:IPI00979305 IPI:IPI00981241
RefSeq:NP_001005753.1 RefSeq:NP_001180446.1 RefSeq:NP_001185883.1
RefSeq:NP_057163.1 UniGene:Hs.591582 PDB:2GD5 PDB:2XZE PDB:3FRT
PDB:3FRV PDBsum:2GD5 PDBsum:2XZE PDBsum:3FRT PDBsum:3FRV
ProteinModelPortal:Q9Y3E7 SMR:Q9Y3E7 DIP:DIP-48532N IntAct:Q9Y3E7
MINT:MINT-1185988 STRING:Q9Y3E7 PhosphoSite:Q9Y3E7 DMDM:73917763
PaxDb:Q9Y3E7 PRIDE:Q9Y3E7 DNASU:51652 Ensembl:ENST00000263856
Ensembl:ENST00000409225 Ensembl:ENST00000409727
Ensembl:ENST00000439940 GeneID:100526767 GeneID:51652
KEGG:hsa:100526767 KEGG:hsa:51652 UCSC:uc002srj.3 CTD:100526767
GeneCards:GC02M086730 HGNC:HGNC:29865 HPA:HPA015673 MIM:610052
neXtProt:NX_Q9Y3E7 PharmGKB:PA134920495 PhylomeDB:Q9Y3E7
ChiTaRS:CHMP3 EvolutionaryTrace:Q9Y3E7 NextBio:55614 Bgee:Q9Y3E7
CleanEx:HS_VPS24 Genevestigator:Q9Y3E7 GermOnline:ENSG00000115561
Uniprot:Q9Y3E7
Length = 222
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/223 (25%), Positives = 109/223 (48%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V
Sbjct: 3 LFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIV 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 63 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 123 IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGA---LGK 179
Query: 182 APSSTVAA---PAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS A P G +A +E ++ +++ +Q+RL LR
Sbjct: 180 APSKVTDALPEPEPPGAMAASEDEEEEEEALEA-MQSRLATLR 221
>RGD|1593500 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10116 "Rattus norvegicus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1593500
GO:GO:0015031 eggNOG:COG5491 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T EMBL:BC168175 IPI:IPI00764309
UniGene:Rn.39132 STRING:B4F787 UCSC:RGD:1593500
Genevestigator:B4F787 Uniprot:B4F787
Length = 230
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 51/200 (25%), Positives = 99/200 (49%)
Query: 11 PAELLRENKRM--LDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIR 68
PA L K + L + +E+ R + +EK ++IKK+ ++G M ++ A++ IR
Sbjct: 29 PATLSNMEKHLFNLKFAAKELNRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 88
Query: 69 TRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQE 128
++Q F ++ +++ V+ R+QT + + ++M GV K+M + MNL + +M +
Sbjct: 89 QKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDK 148
Query: 129 FERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA 188
FE Q E +++ T+ M + ++ DE G+D+N EL + +V
Sbjct: 149 FEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVG 208
Query: 189 ---APAVKGKVAQAEATGND 205
A A + +++Q A D
Sbjct: 209 TSVASAEQDELSQRLARLRD 228
>UNIPROTKB|E1C230 [details] [associations]
symbol:VPS24 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK CTD:40542
EMBL:AADN02014773 IPI:IPI00579079 RefSeq:XP_420858.2
UniGene:Gga.12935 Ensembl:ENSGALT00000025484 GeneID:422918
KEGG:gga:422918 NextBio:20825474 Uniprot:E1C230
Length = 218
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 60/221 (27%), Positives = 108/221 (48%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R I+R+ + +Q +E+K+ IK +AK+GQ +
Sbjct: 3 LFGKTPEKPPKELVNEWSLKIRKEMRVIDRQIRDIQREEEKVKRSIKDAAKKGQKDVCVI 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK+LIR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 63 LAKELIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 123 IQATMRELSKEMMKAGIIEEMLEDTFESMEDEEEMEEEAEMEIDKILFEITAGA---LGK 179
Query: 182 APSS-TVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS T A P + A A +D I++ +Q+RL LR
Sbjct: 180 APSKVTDALPEPEAMGAAAAVDEEED--IEA-MQSRLATLR 217
>MGI|MGI:1913950 [details] [associations]
symbol:Chmp3 "charged multivesicular body protein 3"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005770 "late endosome" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030496 "midbody" evidence=ISO]
[GO:0051036 "regulation of endosome size" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1913950 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 GO:GO:0000910 GO:GO:0005546 GO:GO:0008333
GO:GO:0030496 GO:GO:0005769 GO:GO:0051036 eggNOG:COG5491 CTD:51652
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219
HOVERGEN:HBG107031 KO:K12193 OMA:MSKEMMK OrthoDB:EOG4VT5ZB
EMBL:AK009414 EMBL:AK014818 EMBL:AK016677 EMBL:AK018611
EMBL:AK083562 EMBL:BC049964 IPI:IPI00347275 RefSeq:NP_080059.2
UniGene:Mm.181278 ProteinModelPortal:Q9CQ10 SMR:Q9CQ10
IntAct:Q9CQ10 STRING:Q9CQ10 PhosphoSite:Q9CQ10 PaxDb:Q9CQ10
PRIDE:Q9CQ10 Ensembl:ENSMUST00000059462 Ensembl:ENSMUST00000065364
GeneID:66700 KEGG:mmu:66700 UCSC:uc009cgw.1 InParanoid:Q9CQ10
NextBio:322405 Bgee:Q9CQ10 CleanEx:MM_VPS24 Genevestigator:Q9CQ10
GermOnline:ENSMUSG00000053119 Uniprot:Q9CQ10
Length = 224
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 57/224 (25%), Positives = 108/224 (48%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V
Sbjct: 3 LFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVV 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 63 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 123 IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGA---LGK 179
Query: 182 APSSTVAA---PAVKGKVAQAEATGNDDGGIDSD-LQARLDNLR 221
APS A P G +A +E ++ D + +Q+RL LR
Sbjct: 180 APSKVTDALPEPEPAGAMAASEEGEEEEDEEDLEAMQSRLATLR 223
>UNIPROTKB|E2RDX0 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 OMA:NIDRQIR EMBL:AAEX03010929
Ensembl:ENSCAFT00000011979 NextBio:20851539 Uniprot:E2RDX0
Length = 292
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 56/221 (25%), Positives = 106/221 (47%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V
Sbjct: 74 LFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVV 133
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 134 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 193
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 194 IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGA---LGK 250
Query: 182 APSS-TVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS T A P + A A + ++ +Q+RL LR
Sbjct: 251 APSKVTDALPEPEPSGAMAASEDEEEEEALEAMQSRLATLR 291
>UNIPROTKB|I3LFQ9 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:CU467088
RefSeq:XP_003354782.1 Ensembl:ENSSSCT00000031530 GeneID:100522249
KEGG:ssc:100522249 Uniprot:I3LFQ9
Length = 221
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 56/221 (25%), Positives = 106/221 (47%)
Query: 4 LFGK--RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFGK K P EL+ E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V
Sbjct: 3 LFGKTQEKPPKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVV 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P
Sbjct: 63 LAKEMIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
+Q M+E ++ K ++ E++ ++++L EI L
Sbjct: 123 IQATMRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGA---LGK 179
Query: 182 APSS-TVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
APS T A P + A A + ++ +Q+RL LR
Sbjct: 180 APSKVTDALPEPEPPGAMAASEDEEEEEALEAMQSRLATLR 220
>ZFIN|ZDB-GENE-030131-8370 [details] [associations]
symbol:chmp1b "chromatin modifying protein 1B"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-030131-8370
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T EMBL:AY398326
EMBL:BC045934 EMBL:BC065462 EMBL:BC067569 IPI:IPI00508359
RefSeq:NP_956308.1 UniGene:Dr.8435 ProteinModelPortal:Q7ZVB1
STRING:Q7ZVB1 PRIDE:Q7ZVB1 GeneID:336426 KEGG:dre:336426
InParanoid:Q7ZVB1 OMA:EHLFNLK NextBio:20811727 Uniprot:Q7ZVB1
Length = 199
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 46/182 (25%), Positives = 92/182 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E++R + +EK ++KK+ ++G M ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K M + MNL + +M++FERQ E +++ T M
Sbjct: 76 AARVQTAVTMNQVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDVQTAQMEDS 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA---APAVKGKVAQAEATG 203
+ ++ DE G+D+N EL + +V A A + +++Q A
Sbjct: 136 MSSTTTLTTPQGQVDTLMMEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLAKL 195
Query: 204 ND 205
D
Sbjct: 196 RD 197
>UNIPROTKB|Q7LBR1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9606 "Homo sapiens" [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 CTD:57132 HOVERGEN:HBG080200 KO:K12197 OMA:EHLFNLK
EMBL:AF306520 EMBL:AF281064 EMBL:BC065933 EMBL:BC012733
IPI:IPI00156984 RefSeq:NP_065145.2 UniGene:Hs.656244 PDB:3EAB
PDBsum:3EAB ProteinModelPortal:Q7LBR1 SMR:Q7LBR1 DIP:DIP-48534N
IntAct:Q7LBR1 MINT:MINT-6946813 PhosphoSite:Q7LBR1 DMDM:73917735
PeptideAtlas:Q7LBR1 PRIDE:Q7LBR1 DNASU:57132
Ensembl:ENST00000526991 GeneID:57132 KEGG:hsa:57132 UCSC:uc002kqe.3
GeneCards:GC18P011851 HGNC:HGNC:24287 MIM:606486 neXtProt:NX_Q7LBR1
PharmGKB:PA142672110 EvolutionaryTrace:Q7LBR1 GenomeRNAi:57132
NextBio:63047 ArrayExpress:Q7LBR1 Bgee:Q7LBR1 CleanEx:HS_C18orf2
CleanEx:HS_CHMP1B Genevestigator:Q7LBR1 Uniprot:Q7LBR1
Length = 199
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 46/182 (25%), Positives = 92/182 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G M ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M + MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA---APAVKGKVAQAEATG 203
+ ++ DE G+D+N EL + +V A A + +++Q A
Sbjct: 136 MSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARL 195
Query: 204 ND 205
D
Sbjct: 196 RD 197
>MGI|MGI:1914278 [details] [associations]
symbol:2610002M06Rik "RIKEN cDNA 2610002M06 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1914278
GO:GO:0005829 GO:GO:0051301 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 HOVERGEN:HBG080200 KO:K12197
GermOnline:ENSMUSG00000031242 EMBL:AK011297 EMBL:AK019383
EMBL:AL669851 EMBL:AL844897 EMBL:BC016070 IPI:IPI00173121
RefSeq:NP_080197.2 UniGene:Mm.37274 ProteinModelPortal:Q9CQD4
SMR:Q9CQD4 STRING:Q9CQD4 PRIDE:Q9CQD4 Ensembl:ENSMUST00000120722
GeneID:67028 KEGG:mmu:67028 UCSC:uc009ucj.2
GeneTree:ENSGT00550000074957 InParanoid:Q9CQD4 NextBio:323352
Bgee:Q9CQD4 CleanEx:MM_2610002M06RIK Genevestigator:Q9CQD4
Uniprot:Q9CQD4
Length = 199
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 42/163 (25%), Positives = 83/163 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M R MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAA 189
+ ++ DE G+D+N EL + +V A
Sbjct: 136 MSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGA 178
>RGD|1566265 [details] [associations]
symbol:RGD1566265 "similar to RIKEN cDNA 2610002M06"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1566265
GO:GO:0015031 KO:K12197 GeneTree:ENSGT00550000074957 EMBL:CH473969
RefSeq:NP_001128061.1 UniGene:Rn.8881 SMR:G3V6A6
Ensembl:ENSRNOT00000003188 GeneID:363487 KEGG:rno:363487 CTD:363487
NextBio:683469 Uniprot:G3V6A6
Length = 199
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 42/163 (25%), Positives = 83/163 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M R MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAA 189
+ ++ DE G+D+N EL + +V A
Sbjct: 136 MSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGA 178
>WB|WBGene00017735 [details] [associations]
symbol:F23C8.6 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0015031 GO:GO:0040011
eggNOG:COG5491 HOGENOM:HOG000241980 KO:K12197
GeneTree:ENSGT00550000074957 EMBL:FO081207 OMA:AKMATIT PIR:T33826
RefSeq:NP_490974.1 ProteinModelPortal:Q9TXI3 STRING:Q9TXI3
PaxDb:Q9TXI3 EnsemblMetazoa:F23C8.6 GeneID:171801
KEGG:cel:CELE_F23C8.6 UCSC:F23C8.6 CTD:171801 WormBase:F23C8.6
InParanoid:Q9TXI3 NextBio:872753 Uniprot:Q9TXI3
Length = 205
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 53/197 (26%), Positives = 93/197 (47%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ Q + EK ++ + K+G +V A++ IR +++ + K+ +++ V
Sbjct: 22 KQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAENAIRKKNEAVNYIKMAARIDAV 81
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + + +M GV KAM + MNL +Q++M FER E +++ T+ M
Sbjct: 82 AARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQLMDRFERDFEDLDVTTKTMEKT 141
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDD 206
+ + D+ GI++NQEL PS+ V A TG
Sbjct: 142 MDGTTVLNAPKSQVDALIAEAADKAGIELNQEL---PSN----------VPTALPTGTQA 188
Query: 207 GGIDSDLQARLDNLRRM 223
D DL RL LR M
Sbjct: 189 VSEDKDLTERLAALRNM 205
>UNIPROTKB|F1NVQ6 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074957 IPI:IPI00582566 OMA:EHLFNLK
EMBL:AADN02013150 Ensembl:ENSGALT00000006500 Uniprot:F1NVQ6
Length = 199
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 46/182 (25%), Positives = 92/182 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G M ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M + MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA---APAVKGKVAQAEATG 203
+ ++ DE G+D+N EL + +V A A + +++Q A
Sbjct: 136 MSNTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARL 195
Query: 204 ND 205
D
Sbjct: 196 RD 197
>UNIPROTKB|Q5ZKX1 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 CTD:57132 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
EMBL:AJ719963 IPI:IPI00582566 RefSeq:NP_001006428.1
UniGene:Gga.6697 ProteinModelPortal:Q5ZKX1 STRING:Q5ZKX1
GeneID:422143 KEGG:gga:422143 InParanoid:Q5ZKX1 NextBio:20824822
Uniprot:Q5ZKX1
Length = 199
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 46/182 (25%), Positives = 92/182 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G M ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M + MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMENT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA---APAVKGKVAQAEATG 203
+ ++ DE G+D+N EL + +V A A + +++Q A
Sbjct: 136 MSNTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARL 195
Query: 204 ND 205
D
Sbjct: 196 RD 197
>UNIPROTKB|Q5E994 [details] [associations]
symbol:CHMP1B "Charged multivesicular body protein 1b"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0007049 CTD:57132
HOVERGEN:HBG080200 KO:K12197 EMBL:BT021026 EMBL:BC105547
IPI:IPI00713299 RefSeq:NP_001014904.1 UniGene:Bt.803
ProteinModelPortal:Q5E994 GeneID:512033 KEGG:bta:512033
NextBio:20870218 Uniprot:Q5E994
Length = 199
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 46/182 (25%), Positives = 92/182 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G M ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M + MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA---APAVKGKVAQAEATG 203
+ ++ DE G+D+N EL + +V A A + +++Q A
Sbjct: 136 MSSTTTLTTPQGQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARL 195
Query: 204 ND 205
D
Sbjct: 196 RD 197
>MGI|MGI:1914314 [details] [associations]
symbol:Chmp1b "charged multivesicular body protein 1B"
species:10090 "Mus musculus" [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
MGI:MGI:1914314 GO:GO:0005829 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0007049 EMBL:AK014091 EMBL:AK151071
EMBL:CT010307 EMBL:BC002229 IPI:IPI00117187 RefSeq:NP_077152.1
UniGene:Mm.73777 ProteinModelPortal:Q99LU0 SMR:Q99LU0 IntAct:Q99LU0
STRING:Q99LU0 PhosphoSite:Q99LU0 PaxDb:Q99LU0 PRIDE:Q99LU0
GeneID:67064 KEGG:mmu:67064 UCSC:uc008flu.2 CTD:57132
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200
InParanoid:Q99LU0 KO:K12197 OrthoDB:EOG4PVP0T NextBio:323464
CleanEx:MM_CHMP1B Genevestigator:Q99LU0
GermOnline:ENSMUSG00000031242 Uniprot:Q99LU0
Length = 199
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 46/182 (25%), Positives = 92/182 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+E+ R + +EK ++IKK+ ++G M ++ A++ IR ++Q F ++ +++ V
Sbjct: 16 KELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMSARVDAV 75
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + ++M GV K+M + MNL + +M +FE Q E +++ T+ M
Sbjct: 76 AARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDT 135
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA---APAVKGKVAQAEATG 203
+ ++ DE G+D+N EL + +V A A + +++Q A
Sbjct: 136 MSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARL 195
Query: 204 ND 205
D
Sbjct: 196 RD 197
>FB|FBgn0037231 [details] [associations]
symbol:vps24 "Charged multivesicular body protein 3"
species:7227 "Drosophila melanogaster" [GO:0015031 "protein
transport" evidence=IEA] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] InterPro:IPR005024 Pfam:PF03357 EMBL:AE014297
GO:GO:0006911 GO:GO:0015031 eggNOG:COG5491
GeneTree:ENSGT00550000074896 KO:K12193 OMA:MSKEMMK EMBL:AY058381
RefSeq:NP_649451.1 UniGene:Dm.20141 SMR:Q9VN02 IntAct:Q9VN02
MINT:MINT-896357 STRING:Q9VN02 EnsemblMetazoa:FBtr0078958
GeneID:40542 KEGG:dme:Dmel_CG9779 UCSC:CG9779-RA CTD:40542
FlyBase:FBgn0037231 InParanoid:Q9VN02 OrthoDB:EOG4Z614S
GenomeRNAi:40542 NextBio:819274 Uniprot:Q9VN02
Length = 223
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 53/223 (23%), Positives = 110/223 (49%)
Query: 4 LFGKR--KTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
LFG+ K P E ++E + K +++R+ + +Q +E+K+ +K++A++ +
Sbjct: 3 LFGRTPSKDPKEQVQEWTHKIRKEGNQLDRQIRSIQREEEKVKRSLKQAAQKNDRDTCVI 62
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK+++ R I + Y K+ L + ++++ ST + +++ T+ + M + P
Sbjct: 63 LAKEIVNARKAINRIYTSKAHLNSIQMQMKNQLSTLRVAGSLQKSTEVLQAMQSLVRYPE 122
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
L IM++ ++ K ++ E++ V++VL EI + +L
Sbjct: 123 LAGIMRDMSKEMMKAGIIEEMLDETMDSLEESEELEEEASKEVDKVLWEI---TDGKLGE 179
Query: 182 APSSTVAAPAVKGKV--AQAEATGNDDGGID-SDLQARLDNLR 221
AP A PA K A+ EA +D+ G + ++Q+RL +LR
Sbjct: 180 APLPPEATPADKASASAARVEAEQDDEEGEELQEMQSRLASLR 222
>DICTYBASE|DDB_G0267394 [details] [associations]
symbol:vps46 "SNF7 family protein" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0045324 "late endosome to vacuole transport" evidence=ISS]
[GO:0006623 "protein targeting to vacuole" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
dictyBase:DDB_G0267394 GenomeReviews:CM000150_GR EMBL:AAFI02000003
GO:GO:0010008 GO:GO:0005770 GO:GO:0006623 GO:GO:0045324
eggNOG:COG5491 KO:K12197 OMA:EHLFNLK EMBL:AF081802
RefSeq:XP_647634.1 ProteinModelPortal:O96552 STRING:O96552
PRIDE:O96552 EnsemblProtists:DDB0191317 GeneID:8616449
KEGG:ddi:DDB_G0267394 Uniprot:O96552
Length = 192
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 38/161 (23%), Positives = 87/161 (54%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E++ + + EK ++KK+ +QG M ++ A++ IR ++Q + +L S++ V
Sbjct: 13 KQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYLRLASRIDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R++T +++ +M + K+M + R M+L + ++M +FERQ E +++ + +
Sbjct: 73 ASRVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDLDVQSVYVENA 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTV 187
++QV DE G+++ ++ +APS V
Sbjct: 133 MNQTTTLSTPADQVDLLISQVADEHGLNVGMQMGSAPSEKV 173
>UNIPROTKB|F1SVC7 [details] [associations]
symbol:CHMP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00550000074896 EMBL:CU467088
Ensembl:ENSSSCT00000009004 Uniprot:F1SVC7
Length = 217
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 51/217 (23%), Positives = 102/217 (47%)
Query: 6 GKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKD 65
GK +P + E + K +R ++R+ + +Q +E+K+ +K +AK+GQ V+AK+
Sbjct: 3 GKGSSPMTQVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKE 62
Query: 66 LIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKI 125
+IR+R + K Y K+ + V + ++ + + +++ T+ M M + +P +Q
Sbjct: 63 MIRSRKAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQAT 122
Query: 126 MQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSS 185
M+E ++ K ++ E++ ++++L EI L APS
Sbjct: 123 MRELSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGA---LGKAPSK 179
Query: 186 -TVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
T A P + A A + ++ +Q+RL LR
Sbjct: 180 VTDALPEPEPPGAMAASEDEEEEEALEAMQSRLATLR 216
>POMBASE|SPBC13G1.12 [details] [associations]
symbol:did2 "ESCRT III complex subunit Did2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISM] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005770 "late endosome" evidence=ISO] [GO:0006623
"protein targeting to vacuole" evidence=IC] [GO:0006900 "membrane
budding" evidence=IC] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0032511 "late endosome to vacuole transport via
multivesicular body sorting pathway" evidence=ISO] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IC]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPBC13G1.12 EMBL:CU329671
GO:GO:0012505 GenomeReviews:CU329671_GR GO:GO:0005770 GO:GO:0006623
GO:GO:0000815 eggNOG:COG5491 HOGENOM:HOG000241980 GO:GO:0032511
PIR:T39413 RefSeq:NP_596562.2 STRING:O60074 GeneID:2539670
OrthoDB:EOG42Z80Q NextBio:20800824 GO:GO:0006900 GO:GO:0043162
Uniprot:O60074
Length = 200
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/164 (25%), Positives = 78/164 (47%)
Query: 33 RQGLQT--QEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRI 90
+Q L+ +E+ ++KK+ +G ++ A + IR + + KL S++ VS R+
Sbjct: 20 KQSLKAAKEERAEREKVKKAITKGNSEIARIYASNAIRKQQESLNLLKLSSRIDAVSSRL 79
Query: 91 QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXX 150
QT + +A+ M GV + M + + MNL + ++M +FE Q + + + T M
Sbjct: 80 QTAVTMRAVSGNMAGVVRGMDRAMKTMNLEMISQVMDKFEAQFDDVNVQTGYMNKAMGSV 139
Query: 151 XXXXXXXXXXXXXVNQVLDEIGIDINQELVN---APSSTVAAPA 191
+ V DE G++ NQ + N P+++V PA
Sbjct: 140 TAVDTPQEDVDLLMQTVADEAGLEFNQNMNNNLSVPAASVPTPA 183
>UNIPROTKB|H9L0W3 [details] [associations]
symbol:CHMP2A "Charged multivesicular body protein 2a"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 GeneTree:ENSGT00550000074737
EMBL:AADN02053084 EMBL:AADN02053085 Ensembl:ENSGALT00000029274
OMA:EMMNDAT Uniprot:H9L0W3
Length = 104
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 40/106 (37%), Positives = 56/106 (52%)
Query: 117 MNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDIN 176
+ LP +QKIM EFE+Q E M+M E+M V+QVLDE+G+++
Sbjct: 1 LKLPQIQKIMMEFEKQAEIMDMKEELMNDAIDDAMGDEDDEEESDAVVSQVLDELGLNLT 60
Query: 177 QELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 222
EL P + A +G+ A+A A D D+DL+ RL NLRR
Sbjct: 61 DELATLPPPGGSLAAGEGRAAEAAAALAD---ADADLEERLKNLRR 103
>UNIPROTKB|C9J0A7 [details] [associations]
symbol:CHMP2B "Charged multivesicular body protein 2b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOGENOM:HOG000177218 EMBL:AC123511 EMBL:AC130885 HGNC:HGNC:24537
ChiTaRS:CHMP2B IPI:IPI00947040 ProteinModelPortal:C9J0A7
STRING:C9J0A7 PRIDE:C9J0A7 Ensembl:ENST00000494980
ArrayExpress:C9J0A7 Bgee:C9J0A7 Uniprot:C9J0A7
Length = 183
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/143 (32%), Positives = 76/143 (53%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LF K+KT ++++E R L + R I R+R L+ QEK+L EIKK AK G A K
Sbjct: 1 MASLF-KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKEACK 59
Query: 61 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120
V+AK L+ R Q + + + +Q V+ ++ K+ Q M K K +M +M
Sbjct: 60 VLAKQLVHLRKQKTRTF---ATMQAVNKKMDPQKTLQTMQNFQKENMKM--EMTEEMIND 114
Query: 121 SLQKIMQEFERQNEKMEMVTEVM 143
+L I + + E ++V +V+
Sbjct: 115 TLDDIFDGSDDEEESQDIVNQVL 137
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 40 EKKLISEIKKSAKQGQMGAVKVMAKD---LIRTRHQIEKFYKLKSQLQGVSLRIQTLKST 96
+KK + ++ K + G + + +D L + Q+E K +++ G + L
Sbjct: 6 KKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKI-GNKEACKVLAKQ 64
Query: 97 QAMGEAMKGVTKA-MGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXX 155
K T A M +N++M+ + MQ F+++N KMEM E++
Sbjct: 65 LVHLRKQKTRTFATMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSD 124
Query: 156 XXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
VNQVLDEIGI+I+ ++ APS+ + P+ + ++AT +D+ I+ L+A
Sbjct: 125 DEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSA----STSKATISDEE-IERQLKA 179
>ZFIN|ZDB-GENE-040426-1474 [details] [associations]
symbol:chmp1a "chromatin modifying protein 1A"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-1474 GO:GO:0015031 GO:GO:0010008 GO:GO:0021549
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197
GeneTree:ENSGT00550000074957 EMBL:AY398372 EMBL:BC056577
EMBL:BC067665 IPI:IPI00505457 RefSeq:NP_956857.1 UniGene:Dr.10291
ProteinModelPortal:Q6PHF0 STRING:Q6PHF0 PRIDE:Q6PHF0
Ensembl:ENSDART00000122477 GeneID:393535 KEGG:dre:393535 CTD:5119
NextBio:20814556 ArrayExpress:Q6PHF0 Bgee:Q6PHF0 Uniprot:Q6PHF0
Length = 198
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 35/174 (20%), Positives = 84/174 (48%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++ER + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLERLAKKAEKDSKSEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M +FE Q + +++ T VM
Sbjct: 73 ASKVQTALTMKGVAKNMTQVTKALDKALSSMDLQKVSAVMDKFETQVQNLDVHTSVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAE 200
+ Q+ +E G+++ +L P+ A + + E
Sbjct: 133 MSSATTLSTPQQQVDDLILQIAEESGLEVEDQLSQLPAGASALGETSARAQEKE 186
>CGD|CAL0000893 [details] [associations]
symbol:orf19.4307 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005770 "late endosome" evidence=IEA] [GO:0032511
"late endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0000893
GO:GO:0005739 GO:GO:0015031 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:COG5491 KO:K12197 RefSeq:XP_720614.1 RefSeq:XP_720742.1
ProteinModelPortal:Q5AG72 STRING:Q5AG72 GeneID:3637690
GeneID:3637809 KEGG:cal:CaO19.11783 KEGG:cal:CaO19.4307
Uniprot:Q5AG72
Length = 292
Score = 161 (61.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 42/184 (22%), Positives = 85/184 (46%)
Query: 15 LRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIE 74
L ++ L + +++ R+ +E + ++IKK+ QG ++ A++ IR ++
Sbjct: 95 LEQSLFQLKFTAKQLNRQATKASKEELQEKAKIKKALSQGNNDIAQLYAQNAIRKSNERI 154
Query: 75 KFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 134
+L S++ V+ R+QT + +++ M V + M + + MNL + +M +FE Q E
Sbjct: 155 NLLRLASRIDAVASRVQTAVTMRSVTGNMTQVIRGMDKALQTMNLERISLVMDKFETQFE 214
Query: 135 KMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKG 194
++ T +NQV DE GI++ Q L NA + +P
Sbjct: 215 DLDASTNYYETTTNNVNALTTPQDQVDELLNQVADEAGIEMKQGL-NATKVEITSPVAPN 273
Query: 195 KVAQ 198
+++
Sbjct: 274 SISE 277
>UNIPROTKB|Q5AG72 [details] [associations]
symbol:DID2 "Putative uncharacterized protein DID2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR005024 Pfam:PF03357 CGD:CAL0000893
GO:GO:0005739 GO:GO:0015031 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:COG5491 KO:K12197 RefSeq:XP_720614.1 RefSeq:XP_720742.1
ProteinModelPortal:Q5AG72 STRING:Q5AG72 GeneID:3637690
GeneID:3637809 KEGG:cal:CaO19.11783 KEGG:cal:CaO19.4307
Uniprot:Q5AG72
Length = 292
Score = 161 (61.7 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 42/184 (22%), Positives = 85/184 (46%)
Query: 15 LRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIE 74
L ++ L + +++ R+ +E + ++IKK+ QG ++ A++ IR ++
Sbjct: 95 LEQSLFQLKFTAKQLNRQATKASKEELQEKAKIKKALSQGNNDIAQLYAQNAIRKSNERI 154
Query: 75 KFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 134
+L S++ V+ R+QT + +++ M V + M + + MNL + +M +FE Q E
Sbjct: 155 NLLRLASRIDAVASRVQTAVTMRSVTGNMTQVIRGMDKALQTMNLERISLVMDKFETQFE 214
Query: 135 KMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKG 194
++ T +NQV DE GI++ Q L NA + +P
Sbjct: 215 DLDASTNYYETTTNNVNALTTPQDQVDELLNQVADEAGIEMKQGL-NATKVEITSPVAPN 273
Query: 195 KVAQ 198
+++
Sbjct: 274 SISE 277
>UNIPROTKB|I3LU89 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045014 "negative regulation of
transcription by glucose" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV EMBL:FP325274
RefSeq:NP_001230289.1 UniGene:Ssc.54250 Ensembl:ENSSSCT00000027461
GeneID:100628127 KEGG:ssc:100628127 Uniprot:I3LU89
Length = 196
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 36/174 (20%), Positives = 88/174 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M +FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDKFEQQVQNLDVHTAVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 133 MSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQ 186
>TAIR|locus:2007883 [details] [associations]
symbol:VPS46.1 "vacuolar protein sorting 46.1"
species:3702 "Arabidopsis thaliana" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009790 "embryo development" evidence=IGI]
[GO:0032509 "endosome transport via multivesicular body sorting
pathway" evidence=IGI] [GO:0040007 "growth" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002684 GO:GO:0040007 GO:GO:0015031
GO:GO:0000578 eggNOG:COG5491 KO:K12197 GO:GO:0032509 OMA:AKMATIT
EMBL:AY085606 EMBL:AK118350 IPI:IPI00533081 RefSeq:NP_173215.1
UniGene:At.41817 IntAct:Q8LE58 STRING:Q8LE58
EnsemblPlants:AT1G17730.1 GeneID:838349 KEGG:ath:AT1G17730
TAIR:At1g17730 InParanoid:Q8LE58 ProtClustDB:CLSN2682103
Genevestigator:Q8LE58 Uniprot:Q8LE58
Length = 203
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/176 (21%), Positives = 79/176 (44%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+ ++R+ + + +E+ ++KK+ ++G M ++ A++ IR R + + +L S+L V
Sbjct: 19 KSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLSSRLDAV 78
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
R+ T + ++M + K++ NL + + M FE+Q ME+ E M
Sbjct: 79 VARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSETMDSFEKQFVNMEVQAEFMDNA 138
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEAT 202
+ QV D+ G++++ L P+ + KV + + T
Sbjct: 139 MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAGHAIPTKTEEKVEEDDLT 193
>UNIPROTKB|Q32KR9 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045749 "negative regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045014 "negative regulation of
transcription by glucose" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014
eggNOG:COG5491 HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197
OrthoDB:EOG4PVP0T GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV
EMBL:DAAA02046271 EMBL:BC109956 IPI:IPI00706934
RefSeq:NP_001178189.1 RefSeq:XP_003583421.1 UniGene:Bt.31614
UniGene:Bt.66111 STRING:Q32KR9 Ensembl:ENSBTAT00000047273
Ensembl:ENSBTAT00000047394 GeneID:504669 GeneID:789414
KEGG:bta:504669 KEGG:bta:789414 InParanoid:Q32KR9 NextBio:20929673
Uniprot:Q32KR9
Length = 196
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 36/174 (20%), Positives = 87/174 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQVQNLDVHTSVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 133 MSSATTLTTPQEQVDSLILQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQ 186
>MGI|MGI:1920159 [details] [associations]
symbol:Chmp1a "charged multivesicular body protein 1A"
species:10090 "Mus musculus" [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000910 "cytokinesis" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005815 "microtubule organizing center" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=ISO] [GO:0012505 "endomembrane system"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016363 "nuclear matrix" evidence=ISO]
[GO:0016458 "gene silencing" evidence=ISO] [GO:0019904 "protein
domain specific binding" evidence=ISO] [GO:0045014 "negative
regulation of transcription by glucose" evidence=ISO] [GO:0045749
"negative regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 MGI:MGI:1920159
GO:GO:0045892 GO:GO:0051301 GO:GO:0016192 GO:GO:0015031
GO:GO:0012505 GO:GO:0006351 GO:GO:0010008 GO:GO:0005815
GO:GO:0000794 GO:GO:0016363 GO:GO:0007076 GO:GO:0005769
GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 eggNOG:COG5491
HOGENOM:HOG000241980 HOVERGEN:HBG080200 KO:K12197 OrthoDB:EOG4PVP0T
GeneTree:ENSGT00550000074957 CTD:5119 ChiTaRS:CHMP1A EMBL:AK046416
EMBL:AK159830 EMBL:BC010524 EMBL:BC023807 EMBL:BC036138
EMBL:BC036152 IPI:IPI00122318 RefSeq:NP_663581.1 UniGene:Mm.41596
ProteinModelPortal:Q921W0 STRING:Q921W0 PhosphoSite:Q921W0
PaxDb:Q921W0 PRIDE:Q921W0 DNASU:234852 Ensembl:ENSMUST00000000759
GeneID:234852 KEGG:mmu:234852 UCSC:uc009nuk.2 InParanoid:Q921W0
OMA:DKFEQQV NextBio:382397 Bgee:Q921W0 CleanEx:MM_CHMP1A
Genevestigator:Q921W0 GermOnline:ENSMUSG00000000743 Uniprot:Q921W0
Length = 196
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 36/174 (20%), Positives = 87/174 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHTSVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 133 VSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQ 186
>RGD|1311083 [details] [associations]
symbol:Chmp1a "charged multivesicular body protein 1A"
species:10116 "Rattus norvegicus" [GO:0000794 "condensed nuclear
chromosome" evidence=IEA;ISO] [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0005769 "early endosome" evidence=IEA;ISO]
[GO:0005815 "microtubule organizing center" evidence=IEA;ISO]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;ISO]
[GO:0012505 "endomembrane system" evidence=IEA;ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA;ISO] [GO:0016363 "nuclear matrix"
evidence=IEA;ISO] [GO:0016458 "gene silencing" evidence=IEA;ISO]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IEA;ISO] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1311083 GO:GO:0016192
GO:GO:0015031 GO:GO:0012505 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 KO:K12197 OrthoDB:EOG4PVP0T
GeneTree:ENSGT00550000074957 CTD:5119 IPI:IPI00360574
RefSeq:NP_001076782.1 UniGene:Rn.6239 ProteinModelPortal:D4AE79
PRIDE:D4AE79 Ensembl:ENSRNOT00000021483 GeneID:365024
KEGG:rno:365024 UCSC:RGD:1311083 NextBio:686501 Uniprot:D4AE79
Length = 196
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 36/174 (20%), Positives = 87/174 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDKALSAMDLQKVSAVMDRFEQQVQNLDVHTSVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 133 VSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQ 186
>UNIPROTKB|E1BZL2 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 EMBL:AADN02054137
EMBL:AADN02054138 IPI:IPI00679422 RefSeq:NP_001020611.1
UniGene:Gga.12873 Ensembl:ENSGALT00000009948 GeneID:415841
KEGG:gga:415841 NextBio:20819384 ArrayExpress:E1BZL2 Uniprot:E1BZL2
Length = 196
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 34/162 (20%), Positives = 81/162 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M +FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA 188
+ Q+ +E G++I +L P A
Sbjct: 133 MSSATTLTTPQEQVDSLIVQIAEENGLEIMDQLNQLPEGASA 174
>UNIPROTKB|F1NPS5 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IEA] [GO:0045014 "negative
regulation of transcription by glucose" evidence=IEA] [GO:0045749
"negative regulation of S phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0016192
GO:GO:0015031 GO:GO:0012505 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 GeneTree:ENSGT00550000074957
OMA:DKFEQQV EMBL:AADN02054137 EMBL:AADN02054138 IPI:IPI00639789
Ensembl:ENSGALT00000033674 ArrayExpress:F1NPS5 Uniprot:F1NPS5
Length = 204
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 34/162 (20%), Positives = 81/162 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 21 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAV 80
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M +FE+Q + +++ T VM
Sbjct: 81 ASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDS 140
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA 188
+ Q+ +E G++I +L P A
Sbjct: 141 MSSATTLTTPQEQVDSLIVQIAEENGLEIMDQLNQLPEGASA 182
>UNIPROTKB|E2RTK6 [details] [associations]
symbol:CHMP1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0045014 "negative regulation of transcription by
glucose" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0016192 GO:GO:0015031 GO:GO:0012505
GO:GO:0005815 GO:GO:0000794 GO:GO:0016363 GO:GO:0007076
GO:GO:0005769 GO:GO:0045749 GO:GO:0016458 GO:GO:0045014 KO:K12197
GeneTree:ENSGT00550000074957 CTD:5119 OMA:DKFEQQV EMBL:AAEX03003952
RefSeq:XP_546776.2 Ensembl:ENSCAFT00000037000 GeneID:489656
KEGG:cfa:489656 NextBio:20862808 Uniprot:E2RTK6
Length = 196
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/174 (20%), Positives = 87/174 (50%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ +Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDRALSTMDLQKVSAVMDRFEQQVQNLDVHTAVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 133 MSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLNQLPEGASAVGESSVRSQEDQ 186
>UNIPROTKB|Q9HD42 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0016458 "gene silencing" evidence=IDA] [GO:0000794 "condensed
nuclear chromosome" evidence=IDA] [GO:0045749 "negative regulation
of S phase of mitotic cell cycle" evidence=IMP] [GO:0005769 "early
endosome" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=IDA] [GO:0005815 "microtubule organizing center"
evidence=IDA] [GO:0012505 "endomembrane system" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045014 "negative
regulation of transcription by glucose" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0008237 "metallopeptidase activity"
evidence=TAS] [GO:0008270 "zinc ion binding" evidence=TAS]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0051301 GO:GO:0016192
GO:GO:0015031 GO:GO:0008270 GO:GO:0012505 GO:GO:0008237
GO:GO:0006351 GO:GO:0010008 GO:GO:0005815 GO:GO:0000794
GO:GO:0016363 GO:GO:0007076 GO:GO:0005769 GO:GO:0045749
GO:GO:0016458 GO:GO:0045014 EMBL:AC010538 HOGENOM:HOG000241980
HOVERGEN:HBG080200 OrthoDB:EOG4PVP0T CTD:5119 EMBL:U58048
EMBL:AF281063 EMBL:D38554 EMBL:BT006841 EMBL:BC007527 EMBL:BC010000
EMBL:BC132711 EMBL:BC132713 IPI:IPI00382452 IPI:IPI01015759
PIR:JC4963 RefSeq:NP_002759.2 UniGene:Hs.589427 PDB:2JQ9 PDB:2YMB
PDB:4A5X PDBsum:2JQ9 PDBsum:2YMB PDBsum:4A5X
ProteinModelPortal:Q9HD42 DIP:DIP-50647N IntAct:Q9HD42
MINT:MINT-6946738 STRING:Q9HD42 PhosphoSite:Q9HD42 DMDM:62510514
PaxDb:Q9HD42 PRIDE:Q9HD42 DNASU:5119 Ensembl:ENST00000397901
GeneID:5119 KEGG:hsa:5119 UCSC:uc002fnu.3 GeneCards:GC16M089710
H-InvDB:HIX0013363 HGNC:HGNC:8740 MIM:164010 neXtProt:NX_Q9HD42
PharmGKB:PA33085 eggNOG:NOG331649 ChiTaRS:CHMP1A
EvolutionaryTrace:Q9HD42 GenomeRNAi:5119 NextBio:19738
ArrayExpress:Q9HD42 Bgee:Q9HD42 CleanEx:HS_CHMP1A
Genevestigator:Q9HD42 Uniprot:Q9HD42
Length = 196
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 36/174 (20%), Positives = 86/174 (49%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++ T VM
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDS 132
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 133 MSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQ 186
>SGD|S000001524 [details] [associations]
symbol:VPS24 "Subunit of the ESCRT-III complex" species:4932
"Saccharomyces cerevisiae" [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000815
"ESCRT III complex" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0070676 "intralumenal vesicle formation" evidence=IMP]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
SGD:S000001524 GO:GO:0015031 GO:GO:0012505 EMBL:BK006944
GO:GO:0045324 GO:GO:0000815 EMBL:X71621 eggNOG:COG5491
GeneTree:ENSGT00550000074896 HOGENOM:HOG000177219 KO:K12193
GO:GO:0043162 GO:GO:0070676 OrthoDB:EOG4F7RVD EMBL:Z28041
EMBL:AY557901 PIR:S37862 RefSeq:NP_012883.1
ProteinModelPortal:P36095 SMR:P36095 DIP:DIP-7295N IntAct:P36095
MINT:MINT-468346 STRING:P36095 PaxDb:P36095 EnsemblFungi:YKL041W
GeneID:853825 KEGG:sce:YKL041W CYGD:YKL041w OMA:NIDRQIR
NextBio:975014 Genevestigator:P36095 GermOnline:YKL041W
Uniprot:P36095
Length = 224
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 11 PAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTR 70
P E R + +L K+ R IE+ + L + K IKKSAK+ + V++ AK+L +
Sbjct: 13 PKEQQRRIRSVLRKNGRNIEKSLRELTVLQNKTQQLIKKSAKKNDVRTVRLYAKELYQIN 72
Query: 71 HQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFE 130
Q ++ Y ++QL V ++I + M M ++N + LP L+ M E E
Sbjct: 73 KQYDRMYTSRAQLDSVRMKIDEAIRMNTLSNQMADSAGLMREVNSLVRLPQLRNTMIELE 132
Query: 131 RQNEKMEMVTEVM 143
++ K +++E++
Sbjct: 133 KELMKSGIISEMV 145
>TAIR|locus:2032607 [details] [associations]
symbol:VPS46.2 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS;RCA] [GO:0000578 "embryonic axis specification"
evidence=IGI] [GO:0009793 "embryo development ending in seed
dormancy" evidence=IGI] [GO:0032509 "endosome transport via
multivesicular body sorting pathway" evidence=IGI] [GO:0040007
"growth" evidence=IGI] [GO:0006623 "protein targeting to vacuole"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002684 GO:GO:0040007 GO:GO:0015031 GO:GO:0009793
EMBL:AC008017 GO:GO:0000578 KO:K12197 OMA:EHLFNLK GO:GO:0032509
ProtClustDB:CLSN2682103 UniGene:At.22952 UniGene:At.71264
EMBL:AY059851 EMBL:AY081673 IPI:IPI00527973 PIR:G96755
RefSeq:NP_565053.1 ProteinModelPortal:Q9SSM4 IntAct:Q9SSM4
STRING:Q9SSM4 PRIDE:Q9SSM4 EnsemblPlants:AT1G73030.1 GeneID:843634
KEGG:ath:AT1G73030 TAIR:At1g73030 InParanoid:Q9SSM4
PhylomeDB:Q9SSM4 ArrayExpress:Q9SSM4 Genevestigator:Q9SSM4
Uniprot:Q9SSM4
Length = 203
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 33/150 (22%), Positives = 70/150 (46%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+ ++R+ + + +EK ++KK+ ++G M ++ A++ IR R + + +L S+L V
Sbjct: 19 KSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSEQMNYLRLASRLDAV 78
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
R+ T + ++M + K++ NL + + M FE+Q ME+ E M
Sbjct: 79 VARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMENA 138
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDIN 176
+ QV D+ G++++
Sbjct: 139 MAGSTSLSTPEGEVNSLMQQVADDYGLEVS 168
>UNIPROTKB|G4MKS3 [details] [associations]
symbol:MGG_06670 "Charged multivesicular body protein 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:CM001231 KO:K12193 RefSeq:XP_003709375.1
ProteinModelPortal:G4MKS3 EnsemblFungi:MGG_06670T0 GeneID:2684843
KEGG:mgr:MGG_06670 Uniprot:G4MKS3
Length = 234
Score = 143 (55.4 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 50/221 (22%), Positives = 99/221 (44%)
Query: 8 RKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLI-SEIKKSAKQGQMGA-----VKV 61
RK A ++R+N R LD+ I ++++ ++T+ K LI + K++A+ A V+
Sbjct: 18 RKCNA-MIRQNIRKLDRDIAQVKQ----VETKTKNLIVAADKRAARNPAQAAQAQKEVRA 72
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
A++L+R R + K+QL V +++ + + + +++ M ++N + LP
Sbjct: 73 FARELVRARKTSARLVTSKAQLSSVQMQVNEAFAVRKIEGSIRASVGVMREVNSLVRLPE 132
Query: 122 LQKIMQEFERQNEKMEMVTE-VMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELV 180
L MQ+ + K ++ E V V++VL EI D +
Sbjct: 133 LAGTMQQLSVELMKAGIIEEMVQESFPEADALAEYEEEAGEGEVDKVLGEILKDKTETTG 192
Query: 181 NAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
P++ V+ + K + E D + ++ RL+ LR
Sbjct: 193 KLPTAPVSQEPIPAKAQEDEEEEEDTQAMMDQMRNRLEALR 233
>RGD|1306781 [details] [associations]
symbol:Chmp2b "charged multivesicular body protein 2B"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
InterPro:IPR005024 Pfam:PF03357 RGD:1306781 GO:GO:0005739
GO:GO:0005634 GO:GO:0015031 GeneTree:ENSGT00550000074737
IPI:IPI00766292 Ensembl:ENSRNOT00000000904 Uniprot:F1M8B7
Length = 107
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 34/108 (31%), Positives = 58/108 (53%)
Query: 108 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQV 167
K M +N++M+ + MQ F+++N KMEM E++ VNQV
Sbjct: 1 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQV 60
Query: 168 LDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 215
LDEIGI+I+ ++ APS+ + P+ + ++AT +D+ I+ L+A
Sbjct: 61 LDEIGIEISGKMAKAPSAARSLPSA----STSKATISDEE-IERQLKA 103
>SGD|S000006435 [details] [associations]
symbol:DID2 "Class E protein of the vacuolar protein-sorting
(Vps) pathway" species:4932 "Saccharomyces cerevisiae" [GO:0006623
"protein targeting to vacuole" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0012505 "endomembrane system"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0032511 "late endosome to vacuole transport via multivesicular
body sorting pathway" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005770 "late endosome"
evidence=IDA] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0005768 "endosome" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 SGD:S000006435 GO:GO:0012505
EMBL:BK006944 GO:GO:0010008 GO:GO:0005770 GO:GO:0006623
eggNOG:COG5491 HOGENOM:HOG000241980 KO:K12197
GeneTree:ENSGT00550000074957 GO:GO:0032511 OrthoDB:EOG42Z80Q
EMBL:Z28260 RefSeq:NP_012961.3 RefSeq:NP_012963.3 PDB:3GGZ
PDBsum:3GGZ ProteinModelPortal:P69771 IntAct:P69771
MINT:MINT-4493543 STRING:P69771 PaxDb:P69771 EnsemblFungi:YKR035W-A
GeneID:853906 GeneID:853909 KEGG:sce:YKR035W-A KEGG:sce:YKR037C
CYGD:YKR035w-a KO:K11573 EvolutionaryTrace:P69771 NextBio:975236
Genevestigator:P69771 GermOnline:YKR035W-A Uniprot:P69771
Length = 204
Score = 139 (54.0 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 35/159 (22%), Positives = 79/159 (49%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
++++++ +EK+ +++K++ + + ++ A + IR +++ + KL S++ V
Sbjct: 21 KQLQKQANKASKEEKQETNKLKRALNENE-DISRIYASNAIRKKNERLQLLKLASRVDSV 79
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ R+QT + + + +M V K M + + MNL + IM +FE+Q E ++ V
Sbjct: 80 ASRVQTAVTMRQVSASMGQVCKGMDKALQNMNLQQITMIMDKFEQQFEDLDTSVNVYEDM 139
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQ--ELVNAP 183
+++V DE G+++ Q +L N P
Sbjct: 140 GVNSDAMLVDNDKVDELMSKVADENGMELKQSAKLDNVP 178
>TAIR|locus:2075924 [details] [associations]
symbol:VPS24.2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0000815
"ESCRT III complex" evidence=ISS] InterPro:IPR005024 Pfam:PF03357
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015031 GO:GO:0000815
eggNOG:COG5491 HOGENOM:HOG000177219 KO:K12193 EMBL:AL353992
IPI:IPI00548688 PIR:T48976 RefSeq:NP_190086.1 UniGene:At.53746
ProteinModelPortal:Q9LXH5 SMR:Q9LXH5 EnsemblPlants:AT3G45000.1
GeneID:823635 KEGG:ath:AT3G45000 TAIR:At3g45000 InParanoid:Q9LXH5
OMA:AFSKEMT PhylomeDB:Q9LXH5 ArrayExpress:Q9LXH5
Genevestigator:Q9LXH5 Uniprot:Q9LXH5
Length = 200
Score = 136 (52.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/191 (20%), Positives = 85/191 (44%)
Query: 36 LQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLK 94
++ +E+ + IK S K+ + K +A++++ +R +++ Y+ K+Q+ +S+ + +++
Sbjct: 10 IEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIA 69
Query: 95 STQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXX 154
+ +G K + M +N M P + MQ F ++ K ++ E +
Sbjct: 70 TAVTVGNLSKS-GEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVDNALDSE 128
Query: 155 XXXXXXXXXVNQVLDEIGIDINQELVNAP-SSTVAAPAVKGKVAQAEATGNDDGGIDSDL 213
V++VL I + EL A + PA K + E + + +L
Sbjct: 129 DIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEEL 188
Query: 214 QA---RLDNLR 221
+A RL N+R
Sbjct: 189 EAIRYRLANVR 199
>POMBASE|SPAC9E9.14 [details] [associations]
symbol:vps24 "ESCRT III complex subunit Vps24"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006900 "membrane budding" evidence=IC]
[GO:0012505 "endomembrane system" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IMP] [GO:0045324 "late endosome to vacuole
transport" evidence=IMP] InterPro:IPR005024 Pfam:PF03357
PomBase:SPAC9E9.14 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0012505 GO:GO:0000815 GO:GO:0043328 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 GO:GO:0006900 OMA:MKIVNNL PIR:T39221
RefSeq:NP_594587.1 ProteinModelPortal:O14296 STRING:O14296
EnsemblFungi:SPAC9E9.14.1 GeneID:2542234 KEGG:spo:SPAC9E9.14
OrthoDB:EOG4F7RVD NextBio:20803301 Uniprot:O14296
Length = 231
Score = 133 (51.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/141 (24%), Positives = 73/141 (51%)
Query: 2 SFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKV 61
S+ FG TP E R+ + ++ K R+++R+ L+ KK ++K+ AKQ + +++
Sbjct: 6 SYFFGP--TPQEQNRKWQSIIRKEQRQLDRQVYHLKAGRKKAEVQLKQLAKQSDITNMRI 63
Query: 62 MAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+AK++ R ++ + K+ L +SL++ + + M+ TK M ++ + LP
Sbjct: 64 LAKEIARANRHGKRLAESKALLGSLSLQLNDQMAMLKIQGTMQSSTKIMQDVSSLIRLPQ 123
Query: 122 LQKIMQEFERQNEKMEMVTEV 142
L + M+ + K ++ E+
Sbjct: 124 LSETMRNLSMELTKAGVLEEM 144
>ASPGD|ASPL0000002845 [details] [associations]
symbol:vps24 species:162425 "Emericella nidulans"
[GO:0071467 "cellular response to pH" evidence=IMP;IPI] [GO:0043936
"asexual sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0070676 "intralumenal vesicle formation"
evidence=IEA] [GO:0030448 "hyphal growth" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0000815 "ESCRT III complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 EMBL:BN001301 eggNOG:COG5491
HOGENOM:HOG000177219 KO:K12193 OMA:MSKEMMK EMBL:AACD01000115
OrthoDB:EOG4F7RVD RefSeq:XP_664524.1 ProteinModelPortal:Q5AXR0
STRING:Q5AXR0 EnsemblFungi:CADANIAT00007726 GeneID:2870630
KEGG:ani:AN6920.2 Uniprot:Q5AXR0
Length = 228
Score = 128 (50.1 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 45/213 (21%), Positives = 94/213 (44%)
Query: 13 ELLRENKRMLDKSIREIE----RERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIR 68
+L+R N R LD+ I +++ + RQ + K+ + AKQ + A K++A++L+R
Sbjct: 22 QLIRANTRQLDRDIAQLKALDGKTRQTIVNASKRAQRNPAR-AKQANLEA-KMLARELVR 79
Query: 69 TRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQE 128
R Q + ++QLQ V +++ + + + +++ T M +N + LP L M +
Sbjct: 80 VRRQTTRLTTSRAQLQSVQMQVNEAFAVRKIQGSLQKSTGIMKDVNTLIRLPQLSATMHQ 139
Query: 129 FERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAPSSTVA 188
+ + ++ E++ V+++L EI + +L
Sbjct: 140 LATELVRAGIIEEMVDDAIPNNELLEDEEAEADEEVDKILQEI---LQGKLSQVDEVKPE 196
Query: 189 APAVKGKVAQAEATGNDDGGIDSDLQARLDNLR 221
P + + QAE D + ++ RL+ L+
Sbjct: 197 RPLEEPQ--QAEEEFEDQEAALAQMRGRLEALK 227
>UNIPROTKB|F8VUA2 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 HGNC:HGNC:8740 ChiTaRS:CHMP1A IPI:IPI01022903
ProteinModelPortal:F8VUA2 Ensembl:ENST00000549328 OMA:IMFFFLF
ArrayExpress:F8VUA2 Bgee:F8VUA2 Uniprot:F8VUA2
Length = 181
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/116 (22%), Positives = 65/116 (56%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEV 142
+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++ T V
Sbjct: 73 ASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSV 128
>UNIPROTKB|F8VVT7 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 HGNC:HGNC:8740 ChiTaRS:CHMP1A IPI:IPI01022543
ProteinModelPortal:F8VVT7 Ensembl:ENST00000550102
ArrayExpress:F8VVT7 Bgee:F8VVT7 Uniprot:F8VVT7
Length = 187
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 34/174 (19%), Positives = 82/174 (47%)
Query: 27 REIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 86
+++E+ + + K +++KK+ Q + +V A++ IR +++ + ++ S++ V
Sbjct: 13 KQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAV 72
Query: 87 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXX 146
+ ++ T+ M + K + KA+ M+ Q + +M FE+Q + +++ T VM
Sbjct: 73 ASKV-----TKNMAQVTKALDKALSTMDLQ----KVSSVMDRFEQQVQNLDVHTSVMEDS 123
Query: 147 XXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKVAQ 198
+ Q+ +E G+++ +L P +S V +V+ + Q
Sbjct: 124 MSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQ 177
>UNIPROTKB|F5H875 [details] [associations]
symbol:CHMP1A "Charged multivesicular body protein 1a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AC010538 IPI:IPI01015759 HGNC:HGNC:8740 ChiTaRS:CHMP1A
ProteinModelPortal:F5H875 SMR:F5H875 Ensembl:ENST00000535997
ArrayExpress:F5H875 Bgee:F5H875 Uniprot:F5H875
Length = 132
Score = 112 (44.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/122 (22%), Positives = 58/122 (47%)
Query: 79 LKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEM 138
+ S++ V+ ++QT + + + + M VTKA+ + M+L + +M FE+Q + +++
Sbjct: 1 MASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDV 60
Query: 139 VTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVNAP--SSTVAAPAVKGKV 196
T VM + Q+ +E G+++ +L P +S V +V+ +
Sbjct: 61 HTSVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQE 120
Query: 197 AQ 198
Q
Sbjct: 121 DQ 122
>TAIR|locus:2119956 [details] [associations]
symbol:SNF7.1 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR005024
Pfam:PF03357 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL078470
EMBL:AL161574 GO:GO:0015031 GO:GO:0000815 eggNOG:NOG291419
KO:K12194 HOGENOM:HOG000209960 EMBL:AY042853 EMBL:AY072490
EMBL:AY088519 IPI:IPI00528225 IPI:IPI00548294 PIR:T08971
RefSeq:NP_001078468.1 RefSeq:NP_194645.1 RefSeq:NP_974635.1
UniGene:At.3412 ProteinModelPortal:Q9SZE4 SMR:Q9SZE4 IntAct:Q9SZE4
STRING:Q9SZE4 PaxDb:Q9SZE4 PRIDE:Q9SZE4 EnsemblPlants:AT4G29160.1
EnsemblPlants:AT4G29160.3 GeneID:829037 KEGG:ath:AT4G29160
TAIR:At4g29160 InParanoid:Q9SZE4 OMA:DEINENM PhylomeDB:Q9SZE4
ProtClustDB:CLSN2685332 Genevestigator:Q9SZE4 Uniprot:Q9SZE4
Length = 219
Score = 113 (44.8 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 34/146 (23%), Positives = 71/146 (48%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LFGK K A L+ + L++++ +E++ + L KK +E++K+ + + +
Sbjct: 2 MNRLFGKPKQEANALQTLDK-LNETLEMLEKKEKVLL---KKAGAEVEKAKEYSRAKNKR 57
Query: 61 VMAKDLIRTR---HQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 117
+ L R R Q+E+ + ++ + ++ K+T +A++ AM M +
Sbjct: 58 AAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKAT 117
Query: 118 NLPSLQKIMQEFERQNEKMEMVTEVM 143
N+ + K M E Q E M+ + E +
Sbjct: 118 NIDDVDKTMDEINEQTENMKQIQEAL 143
>UNIPROTKB|Q96FZ7 [details] [associations]
symbol:CHMP6 "Charged multivesicular body protein 6"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 GO:GO:0012505 GO:GO:0016197
GO:GO:0016044 CTD:79643 eggNOG:NOG291677 HOGENOM:HOG000208642
HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6 EMBL:AY329087
EMBL:AK021811 EMBL:CR457284 EMBL:AK223187 EMBL:AK292105
EMBL:BC010108 IPI:IPI00305423 RefSeq:NP_078867.2 UniGene:Hs.514560
PDB:2K3W PDB:3HTU PDBsum:2K3W PDBsum:3HTU ProteinModelPortal:Q96FZ7
SMR:Q96FZ7 IntAct:Q96FZ7 MINT:MINT-5003442 STRING:Q96FZ7
PhosphoSite:Q96FZ7 DMDM:73917777 PaxDb:Q96FZ7 PRIDE:Q96FZ7
DNASU:79643 Ensembl:ENST00000325167 GeneID:79643 KEGG:hsa:79643
UCSC:uc002jyw.4 GeneCards:GC17P078965 HGNC:HGNC:25675 HPA:HPA023001
HPA:HPA024460 MIM:610901 neXtProt:NX_Q96FZ7 PharmGKB:PA142672114
InParanoid:Q96FZ7 OMA:DAITQEQ PhylomeDB:Q96FZ7
EvolutionaryTrace:Q96FZ7 GenomeRNAi:79643 NextBio:68773 Bgee:Q96FZ7
CleanEx:HS_CHMP6 Genevestigator:Q96FZ7 GermOnline:ENSG00000176108
Uniprot:Q96FZ7
Length = 201
Score = 112 (44.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 32/150 (21%), Positives = 82/150 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKS---AKQGQMG 57
M LFG++K R ++ DK+I +++++R L+ +K++ ++++ A+Q
Sbjct: 1 MGNLFGRKKQS----RVTEQ--DKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRD 54
Query: 58 AVKVMAKDLIRT-RHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGV---TKAMGQM 113
K AK L++ R+Q + + ++Q+ + +Q+++ TQ + M+G+ + + +M
Sbjct: 55 GRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKM 114
Query: 114 NRQMNLPSLQKIMQEFERQNEKMEMVTEVM 143
++ M++ +++I+ E + E + E++
Sbjct: 115 HQVMSIEEVERILDETQEAVEYQRQIDELL 144
>TAIR|locus:2051970 [details] [associations]
symbol:SNF7.2 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0000815 "ESCRT III complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
EMBL:AC005169 GO:GO:0000815 eggNOG:NOG291419 KO:K12194 OMA:MKELEAW
HOGENOM:HOG000209960 EMBL:AY045911 EMBL:AY079421 IPI:IPI00526112
PIR:F84581 RefSeq:NP_179573.1 UniGene:At.20997
ProteinModelPortal:O82197 SMR:O82197 IntAct:O82197 STRING:O82197
PaxDb:O82197 PRIDE:O82197 EnsemblPlants:AT2G19830.1 GeneID:816502
KEGG:ath:AT2G19830 TAIR:At2g19830 InParanoid:O82197
PhylomeDB:O82197 Genevestigator:O82197 Uniprot:O82197
Length = 213
Score = 108 (43.1 bits), Expect = 0.00029, P = 0.00029
Identities = 33/146 (22%), Positives = 68/146 (46%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVK 60
M+ LFGK K L+ + L++++ +E++ L KK E++K+ + + +
Sbjct: 3 MNRLFGKPKQETSTLQTLDK-LNETLEMLEKKENVLL---KKATGEVEKAKEFSRAKNKR 58
Query: 61 VMAKDLIRTR---HQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQM 117
+ L R R Q+E+ + ++ + ++ K+T +A++ AM M +
Sbjct: 59 AAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKAT 118
Query: 118 NLPSLQKIMQEFERQNEKMEMVTEVM 143
N+ + K M E Q E M+ + E +
Sbjct: 119 NIDDVDKTMDEINEQTENMKQIQEAL 144
>RGD|1565325 [details] [associations]
symbol:Chmp6 "charged multivesicular body protein 6"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA;ISO] InterPro:IPR005024 Pfam:PF03357 RGD:1565325
GO:GO:0015031 EMBL:CH473948 CTD:79643 KO:K12195 OrthoDB:EOG4DBTG6
GeneTree:ENSGT00530000063571 IPI:IPI00364337 RefSeq:NP_001099326.1
UniGene:Rn.7707 Ensembl:ENSRNOT00000005379 GeneID:287873
KEGG:rno:287873 NextBio:627155 Uniprot:D3ZDR2
Length = 200
Score = 107 (42.7 bits), Expect = 0.00031, P = 0.00031
Identities = 41/207 (19%), Positives = 100/207 (48%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKS---AKQGQMG 57
M LFG++K R ++ D++I +++++R L+ +K++ ++++ A+Q
Sbjct: 1 MGNLFGRKKQS----RVTEQ--DRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRD 54
Query: 58 AVKVMAKDLIRTRHQIEKFY-KLKSQLQGVSLRIQTLKSTQAMGEAMKGV---TKAMGQM 113
K AK L++ + E+ + ++Q+ + +Q+++ TQ + M+G+ + + +M
Sbjct: 55 GRKERAKLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKM 114
Query: 114 NRQMNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGI 173
++ M++ +++I+ E + E + E++ Q+ E+
Sbjct: 115 HQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELNAITQEQI--ELP- 171
Query: 174 DINQELVNAPSSTVAAPAVKGKVAQAE 200
++ E + P ++ APA K + QAE
Sbjct: 172 EVPSEPL--PDTSPEAPA-KARSRQAE 195
>MGI|MGI:3583942 [details] [associations]
symbol:Chmp6 "charged multivesicular body protein 6"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0005768 "endosome" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0047485
"protein N-terminus binding" evidence=ISO] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:3583942 GO:GO:0031902 GO:GO:0015031
GO:GO:0012505 HOGENOM:HOG000238748 CTD:79643 eggNOG:NOG291677
HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6 OMA:DAITQEQ
EMBL:BI157958 IPI:IPI00110956 RefSeq:NP_001078967.1
UniGene:Mm.306673 ProteinModelPortal:P0C0A3 SMR:P0C0A3
STRING:P0C0A3 PhosphoSite:P0C0A3 PaxDb:P0C0A3 PRIDE:P0C0A3
Ensembl:ENSMUST00000026434 GeneID:208092 KEGG:mmu:208092
GeneTree:ENSGT00530000063571 InParanoid:P0C0A3 NextBio:372136
Bgee:P0C0A3 CleanEx:MM_CHMP6 Genevestigator:P0C0A3
GermOnline:ENSMUSG00000025371 Uniprot:P0C0A3
Length = 200
Score = 105 (42.0 bits), Expect = 0.00057, P = 0.00057
Identities = 30/150 (20%), Positives = 81/150 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKS---AKQGQMG 57
M LFG++K R ++ D++I +++++R L+ +K++ ++++ A+Q
Sbjct: 1 MGNLFGRKKQS----RVTEQ--DRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRD 54
Query: 58 AVKVMAKDLIRTRHQIEKFY-KLKSQLQGVSLRIQTLKSTQAMGEAMKGV---TKAMGQM 113
K AK L++ + E+ + ++Q+ + +Q+++ TQ + M+G+ + + +M
Sbjct: 55 GRKERAKLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKM 114
Query: 114 NRQMNLPSLQKIMQEFERQNEKMEMVTEVM 143
++ M++ +++I+ E + E + E++
Sbjct: 115 HQVMSIEEVERILDETQEAVEYQRQIDELL 144
>ZFIN|ZDB-GENE-040426-1374 [details] [associations]
symbol:chmp5b "charged multivesicular body protein
5b" species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 ZFIN:ZDB-GENE-040426-1374 GO:GO:0005829 GO:GO:0015031
GO:GO:0010008 EMBL:BC053265 IPI:IPI00493434 RefSeq:NP_956674.1
UniGene:Dr.11471 ProteinModelPortal:Q7T339 STRING:Q7T339
PRIDE:Q7T339 Ensembl:ENSDART00000061396 GeneID:393351
KEGG:dre:393351 CTD:393351 eggNOG:NOG300000
GeneTree:ENSGT00550000074817 HOGENOM:HOG000191086
HOVERGEN:HBG055759 InParanoid:Q7T339 KO:K12198 OMA:NQSFNME
OrthoDB:EOG4PK290 NextBio:20814401 Bgee:Q7T339 Uniprot:Q7T339
Length = 220
Score = 105 (42.0 bits), Expect = 0.00076, P = 0.00076
Identities = 46/206 (22%), Positives = 84/206 (40%)
Query: 6 GKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKD 65
GK K P L + +D ++++ L + K ++KK VK A
Sbjct: 8 GKPKGPPPNLTDCISGVDSRAESVDKKIARLDAELMKYKDQMKKMRDGPSKNMVKQKAMR 67
Query: 66 LIRTRHQIE-KFYKLKSQ---LQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 121
+++ + E + +L Q ++ + IQTLK T+ EAMK K M + + + +
Sbjct: 68 VLKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAYKNVKIDQ 127
Query: 122 LQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGIDINQELVN 181
++ + + E + ME EV ++ + DE+ +D + ++
Sbjct: 128 IEDLQDQLE---DMMEDANEVQEALSRSYGTPEIDEDDLEAELDALGDELLLDDDNSYLD 184
Query: 182 APSSTVAAPAVKGKVAQAEATGNDDG 207
SS A P +G A + T N DG
Sbjct: 185 EASSAPAIP--EG--APGDRTTNRDG 206
>UNIPROTKB|Q148L0 [details] [associations]
symbol:CHMP6 "Chromatin modifying protein 6" species:9913
"Bos taurus" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 CTD:79643 eggNOG:NOG291677
HOGENOM:HOG000208642 HOVERGEN:HBG080510 KO:K12195 OrthoDB:EOG4DBTG6
OMA:DAITQEQ GeneTree:ENSGT00530000063571 EMBL:DAAA02049440
EMBL:BC118185 IPI:IPI00705933 RefSeq:NP_001068925.1
UniGene:Bt.26731 STRING:Q148L0 Ensembl:ENSBTAT00000018623
GeneID:510596 KEGG:bta:510596 InParanoid:Q148L0 NextBio:20869528
Uniprot:Q148L0
Length = 201
Score = 104 (41.7 bits), Expect = 0.00078, P = 0.00078
Identities = 30/150 (20%), Positives = 81/150 (54%)
Query: 1 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKS---AKQGQMG 57
M LFG++K R ++ DK+I +++++R L+ +K++ ++++ A+Q
Sbjct: 1 MGNLFGRKKQS----RVTEQ--DKAILQLKQQRDKLKQYQKRITQQLEREREIARQLLRD 54
Query: 58 AVKVMAKDLIRTRHQIEKFY-KLKSQLQGVSLRIQTLKSTQAMGEAMKGV---TKAMGQM 113
K AK L++ + E+ K ++Q+ + +Q+++ TQ + ++G+ + + +M
Sbjct: 55 GRKERAKLLLKKKRYREQLLDKTENQITSLETMVQSIEFTQIEMKVIEGLKIGNECLNKM 114
Query: 114 NRQMNLPSLQKIMQEFERQNEKMEMVTEVM 143
++ M++ +++I+ E + + + E++
Sbjct: 115 HQVMSIEEVERILDETQEAVDYQRQIDELL 144
>FB|FBgn0036740 [details] [associations]
symbol:CG6259 species:7227 "Drosophila melanogaster"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 EMBL:AE014296 GO:GO:0015031 GO:GO:0010008
eggNOG:NOG300000 GeneTree:ENSGT00550000074817 KO:K12198 OMA:NQSFNME
EMBL:AY071206 RefSeq:NP_648997.1 UniGene:Dm.6057
ProteinModelPortal:Q9VVI9 SMR:Q9VVI9 IntAct:Q9VVI9
MINT:MINT-1595967 STRING:Q9VVI9 PaxDb:Q9VVI9
EnsemblMetazoa:FBtr0075201 EnsemblMetazoa:FBtr0333123 GeneID:39964
KEGG:dme:Dmel_CG6259 UCSC:CG6259-RA FlyBase:FBgn0036740
InParanoid:Q9VVI9 OrthoDB:EOG4D2560 PhylomeDB:Q9VVI9
GenomeRNAi:39964 NextBio:816311 Bgee:Q9VVI9 Uniprot:Q9VVI9
Length = 226
Score = 105 (42.0 bits), Expect = 0.00082, P = 0.00082
Identities = 47/219 (21%), Positives = 88/219 (40%)
Query: 1 MSFLFG--KRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGA 58
M+ LFG K K P L + +D IE + L+ + +K ++ K + +
Sbjct: 1 MNRLFGRGKPKEPGPSLNDCIAGVDARATNIEEKISNLEAELRKYREQMSKMREGPAKNS 60
Query: 59 VKVMAKDLIRTRHQIEKFYK-LKSQ---LQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMN 114
VK A +++ + E+ + L++Q ++ + Q+LK TQA AMK K M
Sbjct: 61 VKQKALRVLKQKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEY 120
Query: 115 RQMNLPSLQKIMQEFERQNEKMEMVTEVMXXXXXXXXXXXXXXXXXXXXVNQVLDEIGID 174
+++N+ ++ I + + E EV ++ + DEI +D
Sbjct: 121 KKINIDQIEDIQDDMA---DMFEQADEVQEALGRTYGMPEVDDDDLQAELDALGDEIALD 177
Query: 175 IN----QELVNAPSSTVAAPAVKGKVAQAEATGNDDGGI 209
+ ++V AP + P V D+ G+
Sbjct: 178 DDTSYLDDVVKAPEAPSREPGADSIVPGKSTIETDEFGL 216
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.330 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 223 203 0.00092 111 3 10 23 0.38 33
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 90
No. of states in DFA: 536 (57 KB)
Total size of DFA: 165 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.31u 0.09s 31.40t Elapsed: 00:00:03
Total cpu time: 31.32u 0.09s 31.41t Elapsed: 00:00:03
Start: Fri May 10 00:40:08 2013 End: Fri May 10 00:40:11 2013