Query 043390
Match_columns 150
No_of_seqs 145 out of 2167
Neff 11.1
Searched_HMMs 29240
Date Mon Mar 25 07:26:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043390.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043390hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 5.9E-33 2E-37 174.5 13.9 137 4-150 26-162 (169)
2 4gpm_A Engineered protein OR26 100.0 4.9E-31 1.7E-35 165.8 15.3 126 15-150 4-129 (169)
3 2jab_A H10-2-G3; HER2, darpin, 100.0 2.9E-29 9.9E-34 152.4 14.7 127 11-147 10-136 (136)
4 1d9s_A Cyclin-dependent kinase 100.0 6.9E-30 2.4E-34 155.2 11.1 128 11-149 8-136 (136)
5 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.9E-28 6.3E-33 152.6 12.8 135 5-149 28-162 (162)
6 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.2E-28 1.4E-32 152.2 13.9 125 15-149 14-138 (169)
7 2y1l_E Darpin-8.4; hydrolase-i 100.0 8.7E-28 3E-32 150.8 15.3 133 5-147 37-169 (169)
8 4b93_B Ankyrin repeat domain-c 100.0 3.9E-28 1.3E-32 162.8 14.3 138 3-150 74-211 (269)
9 1n0r_A 4ANK, 4 ankyrin repeats 100.0 1.2E-27 4.2E-32 142.9 15.0 124 16-149 3-126 (126)
10 3v31_A Ankyrin repeat family A 100.0 1E-27 3.5E-32 150.1 14.7 124 15-148 36-159 (167)
11 1bi7_B P16INK4A, MTS1, multipl 100.0 1.9E-28 6.5E-33 152.0 10.8 126 13-149 10-136 (156)
12 1awc_B Protein (GA binding pro 100.0 2.5E-27 8.5E-32 146.4 15.7 122 17-149 4-125 (153)
13 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-27 4.5E-32 149.3 14.5 127 14-149 7-133 (165)
14 3v30_A DNA-binding protein rfx 100.0 4.8E-28 1.6E-32 152.2 12.0 127 13-149 34-160 (172)
15 3v31_A Ankyrin repeat family A 100.0 5E-28 1.7E-32 151.5 11.1 125 16-150 4-128 (167)
16 3f6q_A Integrin-linked protein 100.0 2.6E-27 8.8E-32 149.9 14.4 123 18-149 8-130 (179)
17 2rfm_A Putative ankyrin repeat 100.0 1.2E-27 3.9E-32 153.0 12.5 120 17-146 70-189 (192)
18 3v30_A DNA-binding protein rfx 100.0 4E-27 1.4E-31 148.0 14.7 124 18-150 5-128 (172)
19 3twr_A Tankyrase-2; ankyrin re 100.0 1.3E-27 4.5E-32 149.3 12.4 128 10-148 37-164 (165)
20 2rfm_A Putative ankyrin repeat 100.0 2.2E-27 7.4E-32 151.7 13.2 128 13-150 33-160 (192)
21 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.3E-27 8E-32 147.6 12.5 124 15-149 5-128 (162)
22 2dzn_A Probable 26S proteasome 100.0 4.7E-27 1.6E-31 153.5 14.1 130 13-149 70-200 (228)
23 1awc_B Protein (GA binding pro 99.9 1.2E-26 4.2E-31 143.3 14.3 122 12-143 31-152 (153)
24 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.9E-26 6.5E-31 142.7 14.7 119 15-145 36-154 (156)
25 1yyh_A HN1;, notch 1, ankyrin 99.9 7E-27 2.4E-31 155.2 13.0 123 18-149 93-215 (253)
26 3aji_A 26S proteasome non-ATPa 99.9 1.5E-26 5.1E-31 151.4 14.2 124 16-149 74-197 (231)
27 1dcq_A PYK2-associated protein 99.9 2.5E-26 8.5E-31 154.7 15.5 125 17-149 132-263 (278)
28 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.5E-26 5.2E-31 143.2 13.3 121 16-146 3-123 (156)
29 3f6q_A Integrin-linked protein 99.9 4.9E-27 1.7E-31 148.6 11.2 129 12-150 36-164 (179)
30 1ikn_D Protein (I-kappa-B-alph 99.9 6.9E-27 2.4E-31 153.7 12.4 130 15-149 45-176 (236)
31 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.2E-26 4E-31 132.2 11.7 93 50-149 1-93 (93)
32 1oy3_D Transcription factor in 99.9 6.5E-27 2.2E-31 157.0 11.8 96 47-149 154-250 (282)
33 2f8y_A Notch homolog 1, transl 99.9 2.3E-26 7.9E-31 149.8 14.0 61 85-147 154-214 (223)
34 3hra_A Ankyrin repeat family p 99.9 2.4E-26 8.1E-31 147.6 13.4 128 14-149 38-170 (201)
35 3c5r_A BARD-1, BRCA1-associate 99.9 1.4E-27 4.8E-32 145.1 6.8 128 11-148 6-133 (137)
36 2vge_A RELA-associated inhibit 99.9 5.6E-27 1.9E-31 153.9 10.1 125 15-149 21-148 (229)
37 3lvq_E ARF-GAP with SH3 domain 99.9 3.5E-26 1.2E-30 164.9 15.2 123 17-149 134-265 (497)
38 2f8y_A Notch homolog 1, transl 99.9 4.1E-26 1.4E-30 148.6 14.1 137 4-149 47-183 (223)
39 1yyh_A HN1;, notch 1, ankyrin 99.9 4.6E-26 1.6E-30 151.3 14.5 130 12-150 54-183 (253)
40 1ycs_B 53BP2, P53BP2; ankyrin 99.9 4.6E-27 1.6E-31 155.1 9.4 127 13-149 35-164 (239)
41 2rfa_A Transient receptor pote 99.9 5.4E-26 1.8E-30 148.9 14.4 131 16-150 4-147 (232)
42 3utm_A Tankyrase-1; tankyrase, 99.9 3.1E-26 1.1E-30 157.7 13.8 135 6-149 15-149 (351)
43 2pnn_A Transient receptor pote 99.9 2.6E-26 9E-31 153.9 13.1 127 13-149 99-258 (273)
44 2etb_A Transient receptor pote 99.9 2.7E-26 9.3E-31 152.5 12.9 126 13-148 88-245 (256)
45 3jxi_A Vanilloid receptor-rela 99.9 2.6E-26 8.9E-31 152.8 12.4 125 14-148 92-249 (260)
46 2dzn_A Probable 26S proteasome 99.9 7.4E-26 2.5E-30 147.8 14.1 130 12-147 33-163 (228)
47 3hra_A Ankyrin repeat family p 99.9 1.2E-25 4.2E-30 144.2 14.7 125 14-147 71-201 (201)
48 1ikn_D Protein (I-kappa-B-alph 99.9 6.2E-26 2.1E-30 149.1 13.5 140 2-149 65-209 (236)
49 1k1a_A B-cell lymphoma 3-encod 99.9 8.8E-26 3E-30 148.5 14.2 129 13-149 77-208 (241)
50 3aaa_C Myotrophin, protein V-1 99.9 2E-26 6.9E-31 137.5 10.1 116 14-139 6-121 (123)
51 2rfa_A Transient receptor pote 99.9 7.8E-26 2.7E-30 148.2 13.8 137 5-149 27-183 (232)
52 3b7b_A Euchromatic histone-lys 99.9 1.1E-25 3.9E-30 147.8 14.4 128 13-149 75-202 (237)
53 1s70_B 130 kDa myosin-binding 99.9 6.8E-26 2.3E-30 153.4 13.7 133 12-149 70-257 (299)
54 2xai_A ASB-9, ankyrin repeat a 99.9 1.1E-25 3.9E-30 150.1 13.7 126 12-148 33-158 (261)
55 3deo_A Signal recognition part 99.9 1.5E-25 5E-30 142.4 13.1 124 12-146 41-181 (183)
56 4b93_B Ankyrin repeat domain-c 99.9 6E-27 2E-31 157.1 7.1 133 5-147 109-242 (269)
57 3ehr_A Osteoclast-stimulating 99.9 2.2E-26 7.4E-31 150.2 9.2 126 14-149 72-198 (222)
58 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-25 4.5E-30 152.7 13.4 122 17-148 153-283 (301)
59 3aji_A 26S proteasome non-ATPa 99.9 4.5E-25 1.5E-29 144.4 15.5 127 13-149 38-164 (231)
60 1oy3_D Transcription factor in 99.9 1.3E-25 4.5E-30 150.6 12.9 131 14-149 44-217 (282)
61 3ljn_A Hypothetical protein; a 99.9 1.3E-25 4.5E-30 156.0 13.2 131 13-148 136-268 (364)
62 1n11_A Ankyrin; clathrin, BAND 99.9 2.1E-25 7E-30 158.2 14.1 127 13-149 243-369 (437)
63 1n11_A Ankyrin; clathrin, BAND 99.9 3.6E-25 1.2E-29 157.0 15.1 136 4-149 3-138 (437)
64 3b7b_A Euchromatic histone-lys 99.9 6.2E-25 2.1E-29 144.2 15.2 123 17-148 13-135 (237)
65 4hbd_A KN motif and ankyrin re 99.9 7.4E-26 2.5E-30 152.2 11.0 127 13-147 109-273 (276)
66 1ycs_B 53BP2, P53BP2; ankyrin 99.9 6.1E-26 2.1E-30 149.7 10.4 126 14-150 4-129 (239)
67 2xai_A ASB-9, ankyrin repeat a 99.9 2.8E-25 9.6E-30 148.2 13.7 134 5-150 59-192 (261)
68 3d9h_A CDNA FLJ77766, highly s 99.9 3.9E-25 1.3E-29 149.3 13.8 57 17-76 61-117 (285)
69 3ui2_A Signal recognition part 99.9 1.8E-25 6.1E-30 147.9 11.4 124 13-147 43-183 (244)
70 2etb_A Transient receptor pote 99.9 6.5E-26 2.2E-30 150.7 8.8 131 11-149 39-206 (256)
71 3kea_A K1L; tropism, ANK repea 99.9 4.2E-25 1.4E-29 149.1 12.7 125 13-149 29-154 (285)
72 1wdy_A 2-5A-dependent ribonucl 99.9 2.1E-24 7E-29 144.7 16.0 124 16-149 6-130 (285)
73 1k1a_A B-cell lymphoma 3-encod 99.9 2.2E-24 7.5E-29 141.8 15.6 129 15-149 46-175 (241)
74 3utm_A Tankyrase-1; tankyrase, 99.9 2.3E-24 7.9E-29 148.4 16.3 65 83-149 241-305 (351)
75 1sw6_A Regulatory protein SWI6 99.9 2.1E-25 7.1E-30 153.3 11.0 139 4-150 119-309 (327)
76 3jue_A Arfgap with coiled-coil 99.9 7.8E-25 2.7E-29 152.3 13.9 122 17-148 201-325 (368)
77 1wdy_A 2-5A-dependent ribonucl 99.9 1E-24 3.5E-29 146.2 13.8 129 14-150 147-279 (285)
78 1s70_B 130 kDa myosin-binding 99.9 2.7E-24 9.1E-29 145.6 15.9 124 16-149 41-224 (299)
79 3d9h_A CDNA FLJ77766, highly s 99.9 1.7E-24 5.9E-29 146.1 14.8 135 5-150 82-216 (285)
80 3ljn_A Hypothetical protein; a 99.9 9.5E-25 3.3E-29 151.6 13.5 135 10-149 15-198 (364)
81 4hbd_A KN motif and ankyrin re 99.9 8E-25 2.7E-29 147.2 12.6 129 18-149 79-242 (276)
82 3jxi_A Vanilloid receptor-rela 99.9 1.1E-25 3.8E-30 149.8 8.2 129 13-149 44-210 (260)
83 2fo1_E LIN-12 protein; beta-ba 99.9 2E-24 6.8E-29 150.7 13.4 130 12-149 232-371 (373)
84 3kea_A K1L; tropism, ANK repea 99.9 3.5E-25 1.2E-29 149.5 9.3 124 14-149 94-220 (285)
85 2pnn_A Transient receptor pote 99.9 1.3E-24 4.5E-29 145.6 11.8 130 12-149 51-218 (273)
86 3c5r_A BARD-1, BRCA1-associate 99.9 2.7E-24 9.3E-29 130.5 11.7 98 46-150 5-102 (137)
87 3t8k_A Uncharacterized protein 99.9 5.3E-25 1.8E-29 140.2 8.7 126 13-147 36-177 (186)
88 2fo1_E LIN-12 protein; beta-ba 99.9 8.7E-25 3E-29 152.6 10.5 104 45-149 229-338 (373)
89 2l6b_A NR1C; ankyrin, consensu 99.9 7.7E-25 2.6E-29 129.2 8.1 97 46-149 4-100 (115)
90 3eu9_A Huntingtin-interacting 99.9 1.3E-23 4.5E-28 137.7 14.3 123 18-149 12-134 (240)
91 1d9s_A Cyclin-dependent kinase 99.9 2.1E-24 7.1E-29 130.9 9.5 101 42-150 3-104 (136)
92 4g8k_A 2-5A-dependent ribonucl 99.9 1.9E-23 6.4E-28 143.8 15.0 127 15-149 168-298 (337)
93 3t8k_A Uncharacterized protein 99.9 1.2E-24 4.3E-29 138.5 7.7 123 17-150 8-147 (186)
94 3eu9_A Huntingtin-interacting 99.9 1.5E-23 5.1E-28 137.5 12.4 129 16-149 77-235 (240)
95 3aaa_C Myotrophin, protein V-1 99.9 1.3E-23 4.5E-28 125.2 10.7 96 48-150 4-99 (123)
96 2vge_A RELA-associated inhibit 99.9 3E-23 1E-27 136.1 11.3 111 33-150 2-113 (229)
97 2jab_A H10-2-G3; HER2, darpin, 99.9 4E-23 1.4E-27 125.2 9.7 97 47-150 10-106 (136)
98 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.8E-22 9.7E-27 119.4 12.0 94 50-150 1-94 (126)
99 2zgd_A 3 repeat synthetic anky 99.9 1E-22 3.5E-27 119.3 9.6 93 44-143 17-109 (110)
100 4g8k_A 2-5A-dependent ribonucl 99.9 9.8E-22 3.3E-26 135.2 15.9 124 16-149 26-150 (337)
101 3ehr_A Osteoclast-stimulating 99.9 1.2E-22 4.2E-27 132.3 9.8 98 47-150 69-166 (222)
102 3deo_A Signal recognition part 99.9 1.7E-22 5.7E-27 128.2 8.5 95 48-150 41-136 (183)
103 1bi7_B P16INK4A, MTS1, multipl 99.9 1.7E-22 5.8E-27 125.1 7.7 98 45-150 6-104 (156)
104 1sw6_A Regulatory protein SWI6 99.9 2.2E-22 7.4E-27 138.3 8.6 114 26-147 107-228 (327)
105 2aja_A Ankyrin repeat family p 99.9 2.6E-23 8.8E-28 145.1 4.0 127 16-148 93-223 (376)
106 3ui2_A Signal recognition part 99.9 3.8E-22 1.3E-26 131.9 8.2 95 48-150 42-137 (244)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.6E-21 2.3E-25 108.2 11.0 90 16-114 3-92 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 2E-21 6.9E-26 114.4 7.6 106 13-128 7-112 (115)
109 2b0o_E UPLC1; arfgap, structur 99.8 2.5E-21 8.6E-26 131.6 6.3 110 12-137 187-299 (301)
110 2aja_A Ankyrin repeat family p 99.8 3.4E-22 1.2E-26 139.5 -2.2 118 15-148 128-249 (376)
111 3jue_A Arfgap with coiled-coil 99.8 6E-19 2E-23 122.8 9.4 94 50-150 198-294 (368)
112 2zgd_A 3 repeat synthetic anky 99.8 2.1E-18 7.1E-23 100.8 10.2 89 12-109 21-109 (110)
113 3lvq_E ARF-GAP with SH3 domain 99.8 2.7E-18 9.3E-23 123.8 11.7 93 51-150 132-233 (497)
114 1dcq_A PYK2-associated protein 99.8 7.9E-18 2.7E-22 113.2 11.9 97 52-150 131-231 (278)
115 1gp8_A Protein (scaffolding pr 64.8 5.3 0.00018 17.9 1.9 24 11-35 9-32 (40)
116 3zrh_A Ubiquitin thioesterase 59.0 28 0.00095 24.9 5.6 49 26-74 32-92 (454)
117 3mkq_B Coatomer subunit alpha; 40.1 65 0.0022 19.9 9.2 48 88-144 91-138 (177)
118 3zrh_A Ubiquitin thioesterase 23.9 2.1E+02 0.0071 20.7 6.1 53 59-112 30-91 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.9e-33 Score=174.52 Aligned_cols=137 Identities=23% Similarity=0.252 Sum_probs=110.7
Q ss_pred cccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccc
Q 043390 4 IGIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMT 83 (150)
Q Consensus 4 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~ 83 (150)
.|++....+....++++.|+. .++.+.++.++..+.+ ++.+|..|+||||+|+..|+.+++++|++.|++ ++
T Consensus 26 ~Gadvn~~d~~g~t~l~~a~~-~~~~~~~~~ll~~gad--~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad-----vn 97 (169)
T 4gpm_A 26 NGADVNASDSDGRTPLHHAAE-NGHKEVVKLLISKGAD--VNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-----VN 97 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TT
T ss_pred CCCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHhcccc--hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCC-----CC
Confidence 344444444555666777777 7777777777776544 667888899999999999999999999999988 68
Q ss_pred cCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 84 RQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 84 ~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
.+|..|+||||+|+..|+. +++++|++.|++ ++.+|..|+|||++|++.|+.+++++|+++|+.+
T Consensus 98 ~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 98 AKDSDGRTPLHHAAENGHK-EVVKLLISKGAD-VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 8899999999999999996 999999999865 8899999999999999999999999999999864
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=4.9e-31 Score=165.77 Aligned_cols=126 Identities=25% Similarity=0.350 Sum_probs=117.5
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
+.++|+.|+. .|+.+.|+.|++.+.+ ++.+|..|+||||+|+..++.+++++|+..|++ ++.+|..|+||||
T Consensus 4 lg~~L~~Aa~-~G~~~~v~~Ll~~Gad--vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-----~~~~d~~g~TpLh 75 (169)
T 4gpm_A 4 LGKRLIEAAE-NGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-----VNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHH
T ss_pred HHHHHHHHHH-cCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-----hhhhccCCCCHHH
Confidence 3457999999 9999999999998655 788999999999999999999999999999998 6889999999999
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
+|+..|+. +++++|++.|++ ++.+|..|+||||+|++.|+.+++++|+++|+.+
T Consensus 76 ~A~~~g~~-~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~ 129 (169)
T 4gpm_A 76 HAAENGHK-EVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV 129 (169)
T ss_dssp HHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHcCCH-HHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 99999996 999999999965 9999999999999999999999999999999863
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=2.9e-29 Score=152.43 Aligned_cols=127 Identities=22% Similarity=0.229 Sum_probs=115.0
Q ss_pred hhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCC
Q 043390 11 AKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGN 90 (150)
Q Consensus 11 ~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~ 90 (150)
+.....++++.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.+|..|.
T Consensus 10 ~~~~~~t~l~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~d~~g~ 81 (136)
T 2jab_A 10 HGSDLGKKLLEAAR-AGQDDEVRILMANGAD--VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-----VNAVDAIGF 81 (136)
T ss_dssp --CHHHHHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCC
T ss_pred ccccccHHHHHHHH-hCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCC
Confidence 34455667999999 9999999999998655 678899999999999999999999999999998 688999999
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 043390 91 TILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKN 147 (150)
Q Consensus 91 t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~ 147 (150)
||||+|+..|+. +++++|++.++. ++.+|..|.|||++|+..|+.+++++|++.|
T Consensus 82 t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 82 TPLHLAAFIGHL-EIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CHHHHHHHcCCH-HHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999996 999999999865 9999999999999999999999999999886
No 4
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=6.9e-30 Score=155.17 Aligned_cols=128 Identities=15% Similarity=0.109 Sum_probs=117.2
Q ss_pred hhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCC-C
Q 043390 11 AKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKA-G 89 (150)
Q Consensus 11 ~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~-g 89 (150)
.+....++|+.|+. .|+.+.++.|++.+.+ ++.++..|+||||+|+. ++.+++++|++.|++ ++.+|.. |
T Consensus 8 ~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-----~~~~~~~~g 78 (136)
T 1d9s_A 8 LGGSSDAGLATAAA-RGQVETVRQLLEAGAD--PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-----PNCADPATL 78 (136)
T ss_dssp CCCCCSCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-----SSCCBTTTT
T ss_pred CCCCCccHHHHHHH-cCCHHHHHHHHHcCCC--cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-----CCCcCCCCC
Confidence 34455667999999 9999999999998544 77889999999999999 999999999999998 6889999 9
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 90 NTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 90 ~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.||||+|+..|+. +++++|++.++. ++.+|..|.||||+|+..++.+++++|+++|+.
T Consensus 79 ~t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFL-DTLVVLHRAGAR-LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp BCHHHHHHHHTCH-HHHHHHHHTCCC-CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHcCCH-HHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999996 999999999965 999999999999999999999999999999974
No 5
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.9e-28 Score=152.63 Aligned_cols=135 Identities=20% Similarity=0.183 Sum_probs=102.5
Q ss_pred ccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccccc
Q 043390 5 GIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTR 84 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~ 84 (150)
|.+....+....++++.|+. |+.+.++.|+..+.+ ++.++..|+||||+|+..++.+++++|++.|++ ++.
T Consensus 28 ~~~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~ 98 (162)
T 1ihb_A 28 NVNVNAQNGFGRTALQVMKL--GNPEIARRLLLRGAN--PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD-----VNI 98 (162)
T ss_dssp CCCTTCCCTTSCCHHHHCCS--SCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTC
T ss_pred CCCccccCccCccHHHHHHc--CcHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCC
Confidence 33333334444555666543 777777777776443 566778888888888888888888888888877 577
Q ss_pred CCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 85 QNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 85 ~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+|..|.||||+|+..|+. +++++|++.++..++.++..|.|||++|+..|+.+++++|+++|+.
T Consensus 99 ~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 99 EDNEGNLPLHLAAKEGHL-RVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CCTTSCCHHHHHHHTTCH-HHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cCCCCCCHHHHHHHcCCH-HHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 888888888888888886 8888888888765678888888888888888888888888888874
No 6
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=4.2e-28 Score=152.23 Aligned_cols=125 Identities=24% Similarity=0.257 Sum_probs=87.4
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
..+.++.|+. .|+.+.++.|++.+.+ ++..|..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||
T Consensus 14 ~~~~l~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~ 85 (169)
T 2y1l_E 14 LGKKLLEAAR-AGRDDEVRILMANGAD--VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-----VNAVDHAGMTPLR 85 (169)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHH
T ss_pred ccchHHHHHH-cCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHH
Confidence 3445777777 7777777777776433 556677777777777777777777777777766 4666777777777
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+|+..|+. +++++|++.++. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 86 ~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 138 (169)
T 2y1l_E 86 LAALFGHL-EIVEVLLKNGAD-VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138 (169)
T ss_dssp HHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCH-HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777775 777777777644 666777777777777777777777777776654
No 7
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=8.7e-28 Score=150.81 Aligned_cols=133 Identities=21% Similarity=0.207 Sum_probs=118.5
Q ss_pred ccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccccc
Q 043390 5 GIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTR 84 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~ 84 (150)
|.+....+....++|+.|+. .|+.+.++.|++.+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.
T Consensus 37 g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~ 108 (169)
T 2y1l_E 37 GADVNAEDASGWTPLHLAAF-NGHLEIVEVLLKNGAD--VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-----VNA 108 (169)
T ss_dssp TCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTC
T ss_pred CCCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCC
Confidence 44433444556678999999 9999999999998554 678899999999999999999999999999998 688
Q ss_pred CCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 043390 85 QNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKN 147 (150)
Q Consensus 85 ~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~ 147 (150)
+|..|.||||+|+..|+. +++++|++.++. ++.+|..|.|||++|+..|+.+++++|++.|
T Consensus 109 ~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 109 NDMEGHTPLHLAAMFGHL-EIVEVLLKNGAD-VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCTTSCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999996 999999999965 9999999999999999999999999999876
No 8
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=3.9e-28 Score=162.84 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=120.7
Q ss_pred CcccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccc
Q 043390 3 SIGIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKM 82 (150)
Q Consensus 3 s~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~ 82 (150)
..|++....+....++||.|+. .|+.+.++.|+..+.+ ++..+..|.||+|+|+..++.+++++|++.|++ +
T Consensus 74 ~~Gadvn~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~~a~--~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~-----~ 145 (269)
T 4b93_B 74 ASGLGVNVTSQDGSSPLHVAAL-HGRADLIPLLLKHGAN--AGARNADQAVPLHLACQQGHFQVVKCLLDSNAK-----P 145 (269)
T ss_dssp -CCCCTTCCCTTSCCHHHHHHH-TTCTTHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----S
T ss_pred HCCCCCCCcCCCCCCHHHHHHH-cCcHHHHHHHHhcCCC--cCccCCCCCCccccccccChHHHHHHHHHCCCC-----C
Confidence 3444444445556678999999 9999999999988655 677888999999999999999999999999988 6
Q ss_pred ccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 83 TRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 83 ~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
+.+|..|.||||+|+..|+. +++++|++.|++ ++.++..|.||||+|+..|+.+++++|+++|+.+
T Consensus 146 n~~d~~g~TpL~~A~~~g~~-~~v~~Ll~~gad-vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 146 NKKDLSGNTPLIYACSGGHH-ELVALLLQHGAS-INASNNKGNTALHEAVIEKHVFVVELLLLHGASV 211 (269)
T ss_dssp CCCCTTCCCHHHHHHHTTCG-GGHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred CCCCCCCCCHHHHHHHCCCH-HHHHHHHHCCCC-CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 88999999999999999997 999999999965 9999999999999999999999999999999863
No 9
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=1.2e-27 Score=142.88 Aligned_cols=124 Identities=27% Similarity=0.284 Sum_probs=114.8
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.++|+.|+. .|+.+.++.++..+.+ ++..+..|.||||+|+..++.+++++|++.|.+ ++.++..|.||||+
T Consensus 3 ~t~L~~A~~-~~~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 3 RTPLHLAAR-NGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHL 74 (126)
T ss_dssp CCHHHHHHH-HTCHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHH
T ss_pred ccHHHHHHH-cCcHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-----CcccCCCCCcHHHH
Confidence 456999999 9999999999998655 677899999999999999999999999999988 68899999999999
Q ss_pred HHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 96 TASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|+..|+. +++++|++.++. ++.+|..|.|||++|+..|+.+++++|+++|+.
T Consensus 75 A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 75 AARNGHL-EVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHcChH-HHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999996 999999999965 999999999999999999999999999999974
No 10
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=1e-27 Score=150.06 Aligned_cols=124 Identities=17% Similarity=0.101 Sum_probs=70.6
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
..++|+.|+. .|+.+.++.|++.+.+ ++..+..|.||||+|+..++.+++++|++.|++ ++.+|..|.||||
T Consensus 36 g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~ 107 (167)
T 3v31_A 36 GFTPLMWAAA-HGQIAVVEFLLQNGAD--PQLLGKGRESALSLACSKGYTDIVKMLLDCGVD-----VNEYDWNGGTPLL 107 (167)
T ss_dssp SCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCCCTTSCCHHH
T ss_pred CCCHHHHHHH-CCCHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CCcCCCCCCCHHH
Confidence 3444555555 5555555555555332 444555555666666666666666666655555 3555555666666
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
+|+..|+. +++++|++.|+. ++.++..|.|||++|+..|+.+++++|++++.
T Consensus 108 ~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 108 YAVHGNHV-KCVKMLLESGAD-PTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159 (167)
T ss_dssp HHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHH
Confidence 66666654 666666665543 55555566666666666666666666655543
No 11
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.9e-28 Score=152.02 Aligned_cols=126 Identities=16% Similarity=0.086 Sum_probs=114.0
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCCh-
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNT- 91 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t- 91 (150)
....++|+.|+. .|+.+.++.|+..+.+ ++..+..|+||||+|+ .++.+++++|++.|++ ++.+|..|.|
T Consensus 10 ~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-----~~~~d~~g~tt 80 (156)
T 1bi7_B 10 EPSADWLATAAA-RGRVEEVRALLEAGAN--PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-----PNCADPATLTR 80 (156)
T ss_dssp CCSTTHHHHHHH-HTCHHHHHHHHTTTCC--TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-----CCCCCTTTCCC
T ss_pred ccchHHHHHHHH-cCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-----CCCcCCCCCcH
Confidence 344667999999 9999999999988544 7788999999999985 8999999999999988 6889999999
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|||+|+..|+. +++++|++.|+. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 81 pL~~A~~~~~~-~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~ 136 (156)
T 1bi7_B 81 PVHDAAREGFL-DTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG 136 (156)
T ss_dssp HHHHHHHHTCH-HHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--
T ss_pred HHHHHHHCCCH-HHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC
Confidence 99999999996 999999999965 999999999999999999999999999999985
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.5e-27 Score=146.44 Aligned_cols=122 Identities=20% Similarity=0.166 Sum_probs=83.2
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHH
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHET 96 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a 96 (150)
+.|+.|+. .|+.+.++.+++.+.+. + .+..|.||||+|+..|+.+++++|++.|.+ ++.++..|.||||+|
T Consensus 4 ~~L~~A~~-~g~~~~v~~Ll~~g~~~--~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 4 KKLLEAAR-AGQDDEVRILMANGAPF--T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-----RDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHHTCCC--C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHH
T ss_pred HHHHHHHH-cCCHHHHHHHHHcCCCC--C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHH
Confidence 45667777 77777777777765442 1 366677777777777777777777777666 456666777777777
Q ss_pred HHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 97 ASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 97 ~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+..|+. +++++|++.|+. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 75 ~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 125 (153)
T 1awc_B 75 ASEGHA-NIVEVLLKHGAD-VNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125 (153)
T ss_dssp HHHTCH-HHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHcChH-HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 777774 777777776644 666777777777777777777777777776654
No 13
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=1.3e-27 Score=149.30 Aligned_cols=127 Identities=26% Similarity=0.253 Sum_probs=98.7
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHH
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTIL 93 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l 93 (150)
...++|+.|+. .|+.+.++.++...+ ...+..+..|+||||+|+..++.+++++|++.|.+ ++.+|..|.|||
T Consensus 7 ~~~~~l~~A~~-~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L 79 (165)
T 3twr_A 7 EADRQLLEAAK-AGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-----VHAKDKGGLVPL 79 (165)
T ss_dssp HHHHHHHHHHH-HTCHHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHH
T ss_pred hhhHHHHHHHH-hCCHHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-----CCccCCCCCCHH
Confidence 34556888888 888888888777532 33555677778888888888888888888888877 577788888888
Q ss_pred HHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 94 HETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 94 ~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|+|+..|+. +++++|++.++. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 80 ~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 133 (165)
T 3twr_A 80 HNACSYGHY-EVAELLVKHGAV-VNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD 133 (165)
T ss_dssp HHHHHTTCH-HHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCcH-HHHHHHHhCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888888885 888888888754 778888888888888888888888888888765
No 14
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=4.8e-28 Score=152.22 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=104.7
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++|+.|+. .|+.+.++.|++.+.+ ++..+..|+||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 34 ~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~ 105 (172)
T 3v30_A 34 ERGFTPLIWASA-FGEIETVRFLLEWGAD--PHILAKERESALSLASTGGYTDIVGLLLERDVD-----INIYDWNGGTP 105 (172)
T ss_dssp TTSCCHHHHHHH-TTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCTTSCCH
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHHcCCC--chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCCCCCCCCCH
Confidence 445567888888 8888888888887544 667788888888888888888888888888887 57788888888
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.|+. ++.++..|.|||++|+..|+.+++++|+++|++
T Consensus 106 L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 106 LLYAVRGNHV-KCVEALLARGAD-LTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp HHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCH-HHHHHHHHcCCC-ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 8888888886 888888888855 888888888888888888888888888887753
No 15
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5e-28 Score=151.47 Aligned_cols=125 Identities=17% Similarity=0.070 Sum_probs=115.7
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.++||.|+. .|+.+.++.+++.+.. ++..|..|+||||+|+..++.+++++|++.|++ ++.++..|.||||+
T Consensus 4 ~t~L~~A~~-~g~~~~v~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 4 SLSVHQLAA-QGEMLYLATRIEQENV--INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-----PQLLGKGRESALSL 75 (167)
T ss_dssp CCCHHHHHH-TTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHH
T ss_pred cchHHHHHH-CCCHHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCCcCCCCCcHHHH
Confidence 446999999 9999999999998644 778899999999999999999999999999988 57889999999999
Q ss_pred HHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 96 TASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|+..|+. +++++|++.++. ++.++..|.||||+|+..|+.+++++|+++|+.+
T Consensus 76 A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 128 (167)
T 3v31_A 76 ACSKGYT-DIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADP 128 (167)
T ss_dssp HHHHTCH-HHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHcCCH-HHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999996 999999999965 9999999999999999999999999999998763
No 16
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=2.6e-27 Score=149.87 Aligned_cols=123 Identities=19% Similarity=0.164 Sum_probs=100.8
Q ss_pred HHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHH
Q 043390 18 ELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETA 97 (150)
Q Consensus 18 ~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~ 97 (150)
+|+.|+. .|+.+.++.++...+. +++..+..|+||||+|+..++.+++++|++.|++ ++.++..|.||||+|+
T Consensus 8 ~l~~A~~-~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 8 DIFTQCR-EGNAVAVRLWLDNTEN-DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-----INVMNRGDDTPLHLAA 80 (179)
T ss_dssp CHHHHHH-HTCHHHHHHHHHCTTS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHhcCcc-cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHH
Confidence 4888888 8888888888876432 3667788888888888888888888888888877 5778888888888888
Q ss_pred HcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 98 SSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 98 ~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
..|+. +++++|++.++. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 81 ~~~~~-~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 130 (179)
T 3f6q_A 81 SHGHR-DIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGAL 130 (179)
T ss_dssp HTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcCCH-HHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 88885 888888888854 888888888888888888888888888888875
No 17
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=1.2e-27 Score=152.98 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=60.6
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHH
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHET 96 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a 96 (150)
++|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.+|..|.||||+|
T Consensus 70 t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A 141 (192)
T 2rfm_A 70 TALIWAVK-NNRLGIAEKLLSKGSN--VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGAN-----VNDRNLEGETPLIVA 141 (192)
T ss_dssp CHHHHHHH-TTCHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SSCCCTTCCCHHHHH
T ss_pred cHHHHHHH-cCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHH
Confidence 34555555 5555555555544322 344444555555555555555555555555544 344555555555555
Q ss_pred HHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhc
Q 043390 97 ASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGK 146 (150)
Q Consensus 97 ~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~ 146 (150)
+..|+. +++++|++.|+. ++.+|..|.|||++|+..|+.+++++|+++
T Consensus 142 ~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 142 SKYGRS-EIVKKLLELGAD-ISARDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHTCH-HHHHHHHHTTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HHcCCH-HHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 555553 555555555433 555555555555555555555555555543
No 18
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=4e-27 Score=147.99 Aligned_cols=124 Identities=18% Similarity=0.118 Sum_probs=114.3
Q ss_pred HHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHH
Q 043390 18 ELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETA 97 (150)
Q Consensus 18 ~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~ 97 (150)
+|+.|+. .|+.+.++.++..++. .++..+..|+||||+|+..++.+++++|++.|++ ++.++..|.||||+|+
T Consensus 5 ~L~~A~~-~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 5 SIHQLAA-QGELDQLKEHLRKGDN-LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-----PHILAKERESALSLAS 77 (172)
T ss_dssp CHHHHHH-TTCHHHHHHHHTTCSG-GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTCCCHHHHHH
T ss_pred hHHHHHH-cCCHHHHHHHHHcCcc-cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----chhhcccCCCHHHHHH
Confidence 4999999 9999999999998543 2667899999999999999999999999999998 6889999999999999
Q ss_pred HcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 98 SSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 98 ~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
..|+. +++++|++.++. ++.++..|.||||+|+..|+.+++++|+++|+.+
T Consensus 78 ~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 128 (172)
T 3v30_A 78 TGGYT-DIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADL 128 (172)
T ss_dssp HTTCH-HHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HCCCH-HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 99996 999999999965 9999999999999999999999999999998763
No 19
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.3e-27 Score=149.29 Aligned_cols=128 Identities=19% Similarity=0.121 Sum_probs=114.5
Q ss_pred hhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCC
Q 043390 10 DAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAG 89 (150)
Q Consensus 10 ~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g 89 (150)
..+....++|+.|+. .|+.+.++.|++.+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.+|..|
T Consensus 37 ~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g 108 (165)
T 3twr_A 37 DIEGRQSTPLHFAAG-YNRVSVVEYLLQHGAD--VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-----VNVADLWK 108 (165)
T ss_dssp CTTTTCCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTC
T ss_pred ccccCCCCHHHHHHH-cChHHHHHHHHhcCCC--CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-----CCCcCCCC
Confidence 334445678999999 9999999999998655 778899999999999999999999999999998 68899999
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 90 NTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 90 ~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
.||||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+. |+.+++++|+++|+
T Consensus 109 ~t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 109 FTPLHEAAAKGKY-EICKLLLQHGAD-PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCHHHHHHHcCCH-HHHHHHHHcCCC-CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999996 999999999965 99999999999999776 99999999999986
No 20
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=2.2e-27 Score=151.71 Aligned_cols=128 Identities=21% Similarity=0.166 Sum_probs=117.5
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++|+.|+. .|+.+.++.|+..+.+ ++..+..|+||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 33 ~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~ 104 (192)
T 2rfm_A 33 SYNRTPLMVACM-LGMENAIDKLVENFDK--LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-----VNTKDFSGKTP 104 (192)
T ss_dssp TTCCCHHHHHHH-HTCGGGHHHHHHHHCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTSCCH
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHHhccc--cccccccCccHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCcH
Confidence 345667999999 9999999999998655 677899999999999999999999999999988 68899999999
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
||+|+..|+. +++++|++.++. ++.+|..|.||||+|+..|+.+++++|+++|+.+
T Consensus 105 L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 105 LMWSIIFGYS-EMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADI 160 (192)
T ss_dssp HHHHHHHTCH-HHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHcCCH-HHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999999996 999999999865 9999999999999999999999999999998763
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=2.3e-27 Score=147.62 Aligned_cols=124 Identities=18% Similarity=0.289 Sum_probs=114.2
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
..++|+.|+. .|+.+.++.+++.+.+ ++..+..|+||||+|+. ++.+++++|++.|++ ++.++..|.||||
T Consensus 5 ~~~~L~~A~~-~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 5 WGNELASAAA-RGDLEQLTSLLQNNVN--VNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-----PDLKDRTGFAVIH 75 (162)
T ss_dssp CHHHHHHHHH-HTCHHHHHHHTTSCCC--TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-----TTCCCTTSCCHHH
T ss_pred HhhHHHHHHH-cCCHHHHHHHHhCCCC--ccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-----CCCCCCCCCCHHH
Confidence 4567999999 9999999999987544 67889999999999999 999999999999988 6889999999999
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+|+..|+. +++++|++.+.. ++.++..|.||||+|++.|+.+++++|+++|+.
T Consensus 76 ~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 76 DAARAGFL-DTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp HHHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred HHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 99999996 999999999965 999999999999999999999999999999874
No 22
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=4.7e-27 Score=153.47 Aligned_cols=130 Identities=18% Similarity=0.101 Sum_probs=99.6
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++++.|+. .|+.+.++.++..+...+++..+..|.||||+|+..++.+++++|++.|++ ++.++..|.||
T Consensus 70 ~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~ 143 (228)
T 2dzn_A 70 DSGWTPFHIACS-VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-----VRIKDKFNQIP 143 (228)
T ss_dssp TTSCCHHHHHHH-HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----SCCCCTTSCCH
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC-----ccccCCCCCCH
Confidence 344556777777 777777777777654445666777777888888877778888888877776 57778888888
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHH-hccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLA-GKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~-~~~~~ 149 (150)
||+|+..|+. +++++|++.+..+++.+|..|+||||+|+..|+.+++++|+ +.|+.
T Consensus 144 L~~A~~~~~~-~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~ 200 (228)
T 2dzn_A 144 LHRAASVGSL-KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200 (228)
T ss_dssp HHHHHHTTCH-HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCH-HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 8888888885 88888888885557888888888888888888888888888 77765
No 23
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.2e-26 Score=143.32 Aligned_cols=122 Identities=22% Similarity=0.128 Sum_probs=112.1
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCCh
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNT 91 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t 91 (150)
+....++++.|+. .|+.+.++.|++.+.+ ++..+..|+||||+|+..++.+++++|+++|++ ++.+|..|.|
T Consensus 31 ~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t 102 (153)
T 1awc_B 31 DWLGTSPLHLAAQ-YGHFSTTEVLLRAGVS--RDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-----VNAKDMLKMT 102 (153)
T ss_dssp CTTCCCHHHHHHH-HTCHHHHHHHHTTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-----TTCCCTTSCC
T ss_pred CCCCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-----CCCCCCCCCC
Confidence 4455678999999 9999999999987555 678899999999999999999999999999998 6889999999
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHH
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFL 143 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L 143 (150)
|||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+..|+.+++++|
T Consensus 103 ~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 103 ALHWATEHNHQ-EVVELLIKYGAD-VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999996 999999999865 999999999999999999999999987
No 24
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.9e-26 Score=142.73 Aligned_cols=119 Identities=22% Similarity=0.205 Sum_probs=72.3
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
..++++. +. .|+.+.++.|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||
T Consensus 36 g~t~L~~-~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~ 106 (156)
T 1bd8_A 36 GKTALQV-MM-FGSTAIALELLKQGAS--PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-----VNVPDGTGALPIH 106 (156)
T ss_dssp SCCHHHH-SC-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----SCCCCTTSCCHHH
T ss_pred CCcHHHH-HH-cCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----CCCcCCCCCcHHH
Confidence 3444555 55 5666666666655333 455566666666666666666666666666655 4556666666666
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHh
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAG 145 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~ 145 (150)
+|+..|+. +++++|++. + +++.+|..|.|||++|+..|+.+++++|++
T Consensus 107 ~A~~~~~~-~~v~~Ll~~-~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 107 LAVQEGHT-AVVSFLAAE-S-DLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHTCH-HHHHHHHTT-S-CTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHhChH-HHHHHHHhc-c-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 66666664 666666665 3 366666666666666666666666666654
No 25
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.95 E-value=7e-27 Score=155.23 Aligned_cols=123 Identities=22% Similarity=0.198 Sum_probs=67.7
Q ss_pred HHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHH
Q 043390 18 ELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETA 97 (150)
Q Consensus 18 ~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~ 97 (150)
+|+.|+. .|+.+.++.|+..++ .+++..+..|.||||+|+..++.+++++|+..|++ ++.+|..|.||||+|+
T Consensus 93 ~L~~A~~-~~~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~d~~g~t~L~~A~ 165 (253)
T 1yyh_A 93 PLHAAVS-ADAQGVFQILIRNRA-TDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-----VNAVDDLGKSALHWAA 165 (253)
T ss_dssp HHHHHHH-HTCHHHHHHHHHSTT-SCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC-----TTCBCTTSCBHHHHHH
T ss_pred HHHHHHH-cCCHHHHHHHHHcCC-CCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHH
Confidence 3444444 444444444443322 11333344444444444444444444444444444 4556666666666666
Q ss_pred HcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 98 SSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 98 ~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
..|+. +++++|++.|+. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 166 ~~~~~-~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 215 (253)
T 1yyh_A 166 AVNNV-DAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFAN 215 (253)
T ss_dssp HHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 66664 666666666644 666666667777777777777777777666654
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.95 E-value=1.5e-26 Score=151.44 Aligned_cols=124 Identities=19% Similarity=0.195 Sum_probs=76.2
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.++|+.|+. .|+.+.++.|+..+.+ ++..+..|.||||+|+..++.+++++|++.|.+ ++.++..|.||||+
T Consensus 74 ~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~ 145 (231)
T 3aji_A 74 WSPLHIAAS-AGXDEIVKALLVKGAH--VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGAN-----PDAKDHYDATAMHR 145 (231)
T ss_dssp CCHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHH
T ss_pred CCHHHHHHH-cCHHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCcHHHH
Confidence 344555555 5555555555554332 344455555555555555555555555555554 45566667777777
Q ss_pred HHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 96 TASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|+..|+. +++++|++.++. ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 146 A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 146 AAAKGNL-KMVHILLFYKAS-TNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197 (231)
T ss_dssp HHHHTCH-HHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCH-HHHHHHHhcCCC-ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Confidence 7777764 777777776644 666777777777777777777777777777664
No 27
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.95 E-value=2.5e-26 Score=154.72 Aligned_cols=125 Identities=21% Similarity=0.185 Sum_probs=113.9
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCC----ccccccCCCcHHHHHHhh---CChHHHHHHHhhCCCCcccccccCCCCC
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHS----LCVFTIYDDTVLHVAAYT---KKSDLVMKLLDELPDQSLDKMTRQNKAG 89 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~----~~~~~~~g~~~L~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~~g 89 (150)
.+++.|+. .|+.+.+..++..+.+.. ++..+..|+||||+|+.. ++.+++++|+++|++ ++.+|..|
T Consensus 132 ~~l~~a~~-~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-----in~~d~~g 205 (278)
T 1dcq_A 132 HSLCEAVK-TRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-----LDKQTGKG 205 (278)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-----TTCCCTTC
T ss_pred hhhhhHhh-hcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-----ccccCCCC
Confidence 46899999 999999999999876643 445588899999999999 899999999999998 68899999
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 90 NTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 90 ~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+||||+|+..|+. +++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 206 ~TpLh~A~~~g~~-~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 206 STALHYCCLTDNA-ECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHcCCH-HHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999996 999999999965 999999999999999999999999999998874
No 28
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.5e-26 Score=143.17 Aligned_cols=121 Identities=18% Similarity=0.275 Sum_probs=112.1
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.++|+.|+. .|+.+.++.++.. ...+++..+..|+||||+ +..|+.+++++|++.|++ ++.+|..|.||||+
T Consensus 3 ~~~L~~A~~-~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 3 GDRLSGAAA-RGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-----PNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHH
T ss_pred chHHHHHHH-hCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHH
Confidence 356999999 9999999999998 545678889999999999 999999999999999998 68899999999999
Q ss_pred HHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhc
Q 043390 96 TASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGK 146 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~ 146 (150)
|+..|+. +++++|++.|+. ++.+|..|.||||+|+..|+.+++++|+++
T Consensus 75 A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 75 AARTGFL-DTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp HHHTTCH-HHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred HHHcCcH-HHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 9999996 999999999965 999999999999999999999999999976
No 29
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.9e-27 Score=148.60 Aligned_cols=129 Identities=24% Similarity=0.160 Sum_probs=118.5
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCCh
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNT 91 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t 91 (150)
+....++|+.|+. .|+.+.++.|+..+.+ ++..+..|+||||+|+..++.+++++|++.|++ ++.+|..|.|
T Consensus 36 ~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~d~~g~t 107 (179)
T 3f6q_A 36 DDHGFSPLHWACR-EGRSAVVEMLIMRGAR--INVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-----INAVNEHGNV 107 (179)
T ss_dssp CTTSCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCC
T ss_pred CCCCCCHHHHHHH-cCcHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCC
Confidence 3445567999999 9999999999998655 778899999999999999999999999999998 6889999999
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+..++.+++++|+++|+++
T Consensus 108 ~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 108 PLHYACFWGQD-QVAEDLVANGAL-VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTTCC-SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCH-HHHHHHHHCCCC-cchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 99999999996 999999999965 9999999999999999999999999999999864
No 30
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=6.9e-27 Score=153.67 Aligned_cols=130 Identities=18% Similarity=0.114 Sum_probs=68.6
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcc-cccccCCCCCChHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSL-DKMTRQNKAGNTIL 93 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~-~~~~~~~~~g~t~l 93 (150)
..++|+.|+. .|+.+.++.|+..+.+ ++.++..|+||||+|+..++.+++++|+..+.++.. ..++..+..|.|||
T Consensus 45 g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 121 (236)
T 1ikn_D 45 QQTPLHLAVI-TNQPEIAEALLGAGCD--PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121 (236)
T ss_dssp CCCHHHHHHH-TTCHHHHHCCCSCCCC--SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHH
T ss_pred CCCHHHHHHH-cCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHH
Confidence 3444555555 5555555555554322 444555555555555555555555555555543211 11344555555555
Q ss_pred HHHHHcCCcHHHHHHHHhhCCcccccccC-CCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 94 HETASSSHALPVADKLFRKAPGLLGMRNN-NGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 94 ~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~-~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|+|+..|+. +++++|++.|+. ++.++. .|.||||+|+..|+.+++++|+++|+.
T Consensus 122 ~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 176 (236)
T 1ikn_D 122 HLASIHGYL-GIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD 176 (236)
T ss_dssp HHHHHTTCH-HHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHcCCH-HHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 555555553 555555555533 555554 555555555555555555555555543
No 31
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.95 E-value=1.2e-26 Score=132.24 Aligned_cols=93 Identities=30% Similarity=0.398 Sum_probs=86.9
Q ss_pred CCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHH
Q 043390 50 YDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALL 129 (150)
Q Consensus 50 ~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~ 129 (150)
+|+||||+|+..++.+++++|++.|++ ++.+|..|+||||+|+..|+. +++++|++.|+. ++.+|..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~n~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGHL-EVVKLLLEAGAD-VNAKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-CCccCCCCCCHHH
Confidence 489999999999999999999999998 688999999999999999996 999999999965 9999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCC
Q 043390 130 GAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 130 ~a~~~g~~~~~~~L~~~~~~ 149 (150)
+|+..|+.+++++|+++|+.
T Consensus 74 ~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 74 LAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999974
No 32
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.94 E-value=6.5e-27 Score=157.01 Aligned_cols=96 Identities=24% Similarity=0.234 Sum_probs=62.2
Q ss_pred cccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCC-CCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCC
Q 043390 47 FTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNK-AGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGG 125 (150)
Q Consensus 47 ~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~-~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~ 125 (150)
.+..|+||||+|+..|+.+++++|++.|++ ++.++. .|.||||+|+..|+. +++++|++.|+. ++.+|..|.
T Consensus 154 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~gad-~~~~d~~g~ 226 (282)
T 1oy3_D 154 ENYDGHTPLHVAVIHKDAEMVRLLRDAGAD-----LNKPEPTCGRTPLHLAVEAQAA-SVLELLLKAGAD-PTARMYGGR 226 (282)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSC
T ss_pred cCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCcCHHHHHHHcCCH-HHHHHHHHcCCC-CcccccCCC
Confidence 444556666666666666666666666655 345553 367777777777774 777777777644 666777777
Q ss_pred CHHHHHHHcCCHHHHHHHHhccCC
Q 043390 126 TALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 126 tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||||+|+..|+.+++++|+++|+.
T Consensus 227 tpL~~A~~~~~~~~v~~Ll~~ga~ 250 (282)
T 1oy3_D 227 TPLGSALLRPNPILARLLRAHGAP 250 (282)
T ss_dssp CHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred CHHHHHHHcCCcHHHHHHHHcCCC
Confidence 777777777777777777777664
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=2.3e-26 Score=149.81 Aligned_cols=61 Identities=18% Similarity=0.082 Sum_probs=24.0
Q ss_pred CCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 043390 85 QNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKN 147 (150)
Q Consensus 85 ~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~ 147 (150)
+|..|.||||+|+..|+. +++++|++.++. ++.++..|.||+++|++.++.+++++|+++|
T Consensus 154 ~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 154 QNNREETPLFLAAREGSY-ETAKVLLDHFAN-RDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp CCTTCCCHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred cCCCCcCHHHHHHHcCCH-HHHHHHHHcCCC-CccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 333334444444443332 344444433322 3333333444444444444444444444333
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=2.4e-26 Score=147.58 Aligned_cols=128 Identities=18% Similarity=0.216 Sum_probs=73.4
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHH
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTIL 93 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l 93 (150)
...++|+.|+. .|+.+.++.|++.+.+ ++..+..|+||||+|+..++.+++++|+..+.. +++.++..|.|||
T Consensus 38 ~g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~----~~~~~~~~g~t~L 110 (201)
T 3hra_A 38 EGNTPLNIAVH-NNDIEIAKALIDRGAD--INLQNSISDSPYLYAGAQGRTEILAYMLKHATP----DLNKHNRYGGNAL 110 (201)
T ss_dssp TSCCHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC----CTTCCCTTSCCSH
T ss_pred CCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCc----ccccccCCCCcHH
Confidence 33445666666 6666666666665433 455566666666666666666666666643322 1455555556666
Q ss_pred HHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCC-----HHHHHHHHhccCC
Q 043390 94 HETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGK-----IEIFNFLAGKNFR 149 (150)
Q Consensus 94 ~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~-----~~~~~~L~~~~~~ 149 (150)
|+|+..|+. +++++|++.+..+++.++..|+||||+|+..+. .+++++|+++|+.
T Consensus 111 ~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~ 170 (201)
T 3hra_A 111 IPAAEKGHI-DNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD 170 (201)
T ss_dssp HHHHHTTCH-HHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC
T ss_pred HHHHHcCCH-HHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC
Confidence 666665554 566666655533455555555666666655554 5555666555543
No 35
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=1.4e-27 Score=145.05 Aligned_cols=128 Identities=17% Similarity=0.075 Sum_probs=112.2
Q ss_pred hhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCC
Q 043390 11 AKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGN 90 (150)
Q Consensus 11 ~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~ 90 (150)
.+....++||.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.+|..|.
T Consensus 6 ~~~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~ 77 (137)
T 3c5r_A 6 TNHRGETLLHIASI-KGDIPSVEYLLQNGSD--PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-----VNTTGYQND 77 (137)
T ss_dssp CCTTCCCHHHHHHH-HTCHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCGGGC
T ss_pred cCCCCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-----ccCcCCCCC
Confidence 34556678999999 9999999999998554 678899999999999999999999999999998 688999999
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 91 TILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 91 t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
||||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+..+..+++++|.+.+.
T Consensus 78 t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 78 SPLHDAAKNGHV-DIVKLLLSYGAS-RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CHHHHHHHcCCH-HHHHHHHHcCCC-CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 999999999996 999999999865 99999999999999999999999988876653
No 36
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=5.6e-27 Score=153.86 Aligned_cols=125 Identities=18% Similarity=0.154 Sum_probs=114.2
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
..+.|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||
T Consensus 21 ~~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-----~n~~d~~g~tpLh 92 (229)
T 2vge_A 21 PLVLLLDAAL-TGELEVVQQAVKEMND--PSQPNEEGITALHNAICGANYSIVDFLITAGAN-----VNSPDSHGWTPLH 92 (229)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHH
T ss_pred hhHHHHHHHH-cCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHH
Confidence 3456999999 9999999999998655 678899999999999999999999999999998 6889999999999
Q ss_pred HHHHcCCcHHHHHHHHhhCCccccccc-CCCCCHHHHH--HHcCCHHHHHHHHhccCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRN-NNGGTALLGA--AHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~-~~g~tpl~~a--~~~g~~~~~~~L~~~~~~ 149 (150)
+|+..|+. +++++|++.|+. ++.++ ..|+||||+| +..|+.+++++|+++|+.
T Consensus 93 ~A~~~g~~-~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 93 CAASCNDT-VICMALVQHGAA-IFATTLSDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp HHHHTTCH-HHHHHHHTTTCC-TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHcCCC-cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 99999996 999999999966 88876 6999999999 999999999999998864
No 37
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.94 E-value=3.5e-26 Score=164.88 Aligned_cols=123 Identities=23% Similarity=0.210 Sum_probs=113.1
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCcccc------ccCCCcHHHHHHh---hCChHHHHHHHhhCCCCcccccccCCC
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCVF------TIYDDTVLHVAAY---TKKSDLVMKLLDELPDQSLDKMTRQNK 87 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~------~~~g~~~L~~a~~---~~~~~~v~~ll~~~~~~~~~~~~~~~~ 87 (150)
+.|+.|+. .|+.+.++.++..+.+ ++.. +..|+||||+||. .|+.+++++|+++|++ ++.+|.
T Consensus 134 ~~L~~A~~-~g~~~~v~~ll~~g~~--~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-----vn~~d~ 205 (497)
T 3lvq_E 134 QRLWTAIC-NRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-----LDAKAA 205 (497)
T ss_dssp HHHHHHHH-HTCHHHHHHHHHTTCC--SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----TTCCCS
T ss_pred HHHHHHHh-ccCHHHHHHHHhhccc--ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----CCccCC
Confidence 56999999 9999999999999766 4433 7889999999977 8999999999999998 689999
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 88 AGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 88 ~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.|+||||+|+..|+. +++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 206 ~g~TpLh~A~~~g~~-~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 206 DGNTALHYAALYNQP-DCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp SSCCHHHHHTTTTCH-HHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred CCCcHHHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999996 999999999965 999999999999999999999999999999986
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=4.1e-26 Score=148.63 Aligned_cols=137 Identities=20% Similarity=0.175 Sum_probs=121.4
Q ss_pred cccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccc
Q 043390 4 IGIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMT 83 (150)
Q Consensus 4 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~ 83 (150)
.|.+....+....++|+.|+. .|+.+.++.|+...+. .++..+..|.||||+|+..++.+++++|++.|++ ++
T Consensus 47 ~g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~ 119 (223)
T 2f8y_A 47 ASADANIQDNMGRTPLHAAVS-ADAQGVFQILIRNRAT-DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-----VN 119 (223)
T ss_dssp TTCCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHBTTS-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TT
T ss_pred cCCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHcCCC-CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC-----Cc
Confidence 344444445566778999999 9999999999987542 3677899999999999999999999999999998 68
Q ss_pred cCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 84 RQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 84 ~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.++..|.||||+|+..|+. +++++|++.++. ++.++..|.||||+|++.|+.+++++|+++|+.
T Consensus 120 ~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 183 (223)
T 2f8y_A 120 AVDDLGKSALHWAAAVNNV-DAAVVLLKNGAN-KDMQNNREETPLFLAAREGSYETAKVLLDHFAN 183 (223)
T ss_dssp CBCTTSCBHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CcCCCCCcHHHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8999999999999999996 999999999865 999999999999999999999999999999875
No 39
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=4.6e-26 Score=151.30 Aligned_cols=130 Identities=15% Similarity=0.098 Sum_probs=118.1
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCCh
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNT 91 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t 91 (150)
+....++|+.|+. .|+.+.++.|++.+.+ ++..+..|+||||+|+..++.+++++|+..+.. +++.++..|.|
T Consensus 54 d~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~~g~t 126 (253)
T 1yyh_A 54 DRTGETALHLAAR-YSRSDAAKRLLEASAD--ANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT----DLDARMHDGTT 126 (253)
T ss_dssp CTTSCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTS----CTTCCCTTCCC
T ss_pred CCCCCcHHHHHHH-cCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CccccCCCCCc
Confidence 3455678999999 9999999999998655 778899999999999999999999999999874 26889999999
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+. +++++|++.++. ++.++..|.||||+|+..|+.+++++|+++|+.+
T Consensus 127 ~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 183 (253)
T 1yyh_A 127 PLILAARLAVE-GMLEDLINSHAD-VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANK 183 (253)
T ss_dssp HHHHHHHHTCS-SHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcChH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999997 999999999865 9999999999999999999999999999999763
No 40
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=4.6e-27 Score=155.07 Aligned_cols=127 Identities=19% Similarity=0.114 Sum_probs=111.8
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....+.|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..|+.+++++|+.+|++ ++.+|..|+||
T Consensus 35 ~~~~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~tp 106 (239)
T 1ycs_B 35 PLPLALLLDSSL-EGEFDLVQRIIYEVDD--PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-----VNAADSDGWTP 106 (239)
T ss_dssp --CHHHHHHHHH-HTCHHHHHHHTSTTSS--CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCCCTTCCCH
T ss_pred chhhHHHHHHHH-cCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCH
Confidence 334567999999 9999999999988654 778899999999999999999999999999988 68899999999
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCC-CHHHHH--HHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGG-TALLGA--AHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~-tpl~~a--~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.|++ ++.++..|. ||||+| +..|+.+++++|+++|++
T Consensus 107 L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~ 164 (239)
T 1ycs_B 107 LHCAASCNNV-QVCKFLVESGAA-VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK 164 (239)
T ss_dssp HHHHHHTTCH-HHHHHHHHTTCC-TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHcCCH-HHHHHHHHcCCC-cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhc
Confidence 9999999996 999999999965 888888776 999999 788999999999988764
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=5.4e-26 Score=148.93 Aligned_cols=131 Identities=23% Similarity=0.271 Sum_probs=113.2
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.++||.|+. .|+.+.++.++... +.+++.+|..|+||||+|+..|+.+++++|++.|++......+.+|..|.||||+
T Consensus 4 ~t~L~~A~~-~g~~~~v~~Ll~~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 4 ESPLLLAAK-ENDVQALSKLLKFE-GCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp TCHHHHHHH-TTCHHHHHHHHTTT-CSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCHHHHHHH-cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 457999999 99999999999872 2347788999999999999999999999999999874222336678899999999
Q ss_pred HHHcCCcHHHHHHHHhhCCcccccccC-------------CCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 96 TASSSHALPVADKLFRKAPGLLGMRNN-------------NGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~~~~~~~~~-------------~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|+..|+. +++++|++.++. ++.++. .|.||||+|+..|+.+++++|+++|+.+
T Consensus 82 A~~~~~~-~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 82 AVINQNV-NLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp HHHTTCH-HHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHcCCH-HHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 9999996 999999999865 777655 7999999999999999999999999863
No 42
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=3.1e-26 Score=157.72 Aligned_cols=135 Identities=21% Similarity=0.223 Sum_probs=120.6
Q ss_pred cccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccC
Q 043390 6 IEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQ 85 (150)
Q Consensus 6 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~ 85 (150)
......+....+.|+.|+. .|+.+.+++++... ..+++..|..|+||||+|+..|+.+++++|++.|++ ++.+
T Consensus 15 ~~~~~~~~~~~~~L~~A~~-~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~ 87 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEAAR-SGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-----VHAK 87 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCC
T ss_pred eeeeeeccccchhHHHHHH-cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcc
Confidence 3344445566778999999 99999999999863 344778899999999999999999999999999998 6889
Q ss_pred CCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 86 NKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 86 ~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|..|.||||+|+..|+. +++++|++.++. ++..+..|.||||+|+..|+.+++++|+++|+.
T Consensus 88 ~~~g~t~L~~A~~~g~~-~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHY-EVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp CTTCCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCcHHHHHHHCCCH-HHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999996 999999999965 999999999999999999999999999999875
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=2.6e-26 Score=153.89 Aligned_cols=127 Identities=23% Similarity=0.321 Sum_probs=113.7
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCcccccc--------------CCCcHHHHHHhhCChHHHHHHHh---hCC
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTI--------------YDDTVLHVAAYTKKSDLVMKLLD---ELP 75 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~--------------~g~~~L~~a~~~~~~~~v~~ll~---~~~ 75 (150)
....++||.|+. .|+.+.++.|++.+.+ ++..+. .|+||||+|+..|+.+++++|++ .|+
T Consensus 99 ~~g~tpL~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 175 (273)
T 2pnn_A 99 YKGQTALHIAIE-RRNMTLVTLLVENGAD--VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175 (273)
T ss_dssp TTTCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHHCCCC--cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC
Confidence 456678999999 9999999999998655 556665 79999999999999999999999 888
Q ss_pred CCcccccccCCCCCChHHHHHHHcCC---------cHHHHHHHHhhCCcccc-------cccCCCCCHHHHHHHcCCHHH
Q 043390 76 DQSLDKMTRQNKAGNTILHETASSSH---------ALPVADKLFRKAPGLLG-------MRNNNGGTALLGAAHNGKIEI 139 (150)
Q Consensus 76 ~~~~~~~~~~~~~g~t~l~~a~~~g~---------~~~~~~~Ll~~~~~~~~-------~~~~~g~tpl~~a~~~g~~~~ 139 (150)
+ ++.+|..|+||||+|+..|+ . +++++|++.|+. ++ .+|..|.||||+|++.|+.++
T Consensus 176 d-----~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~-~~v~~Ll~~ga~-~n~~~~~~~~~d~~g~TpL~~A~~~g~~~i 248 (273)
T 2pnn_A 176 D-----ISARDSVGNTVLHALVEVADNTVDNTKFVT-SMYNEILILGAK-LHPTLKLEEITNRKGLTPLALAASSGKIGV 248 (273)
T ss_dssp C-----TTCCCTTSCCHHHHHHHHCCSCHHHHHHHH-HHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred C-----ceeeCCCCCcHHHHHHHccCcchhHHHHHH-HHHHHHHHhhhh-cccccccccccCCCCCCHHHHHHHhChHHH
Confidence 8 68899999999999999887 5 899999999865 65 589999999999999999999
Q ss_pred HHHHHhccCC
Q 043390 140 FNFLAGKNFR 149 (150)
Q Consensus 140 ~~~L~~~~~~ 149 (150)
+++|+++|++
T Consensus 249 v~~Ll~~ga~ 258 (273)
T 2pnn_A 249 LAYILQREIH 258 (273)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHCCCC
Confidence 9999999984
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=2.7e-26 Score=152.48 Aligned_cols=126 Identities=30% Similarity=0.349 Sum_probs=113.3
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccC-------------CCcHHHHHHhhCChHHHHHHHh---hCCC
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIY-------------DDTVLHVAAYTKKSDLVMKLLD---ELPD 76 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~-------------g~~~L~~a~~~~~~~~v~~ll~---~~~~ 76 (150)
....++||.|+. .|+.+.++.|++.+.+ ++..+.. |+||||+|+..|+.+++++|++ .|++
T Consensus 88 ~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~ 164 (256)
T 2etb_A 88 YQGHSALHIAIE-KRSLQCVKLLVENGAD--VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164 (256)
T ss_dssp TTTCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 446678999999 9999999999998655 5566665 9999999999999999999999 8888
Q ss_pred CcccccccCCCCCChHHHHHHH--cCCcHH-------HHHHHHhhCCccc-------ccccCCCCCHHHHHHHcCCHHHH
Q 043390 77 QSLDKMTRQNKAGNTILHETAS--SSHALP-------VADKLFRKAPGLL-------GMRNNNGGTALLGAAHNGKIEIF 140 (150)
Q Consensus 77 ~~~~~~~~~~~~g~t~l~~a~~--~g~~~~-------~~~~Ll~~~~~~~-------~~~~~~g~tpl~~a~~~g~~~~~ 140 (150)
++.+|..|+||||+|+. .++. + ++++|++.|+. + +.+|..|.||||+|++.|+.+++
T Consensus 165 -----~n~~d~~g~TpLh~A~~~~~~~~-~~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 237 (256)
T 2etb_A 165 -----LEATDSLGNTVLHALVMIADNSP-ENSALVIHMYDGLLQMGAR-LCPTVQLEEISNHQGLTPLKLAAKEGKIEIF 237 (256)
T ss_dssp -----TTCCCTTSCCHHHHHHHHCCSCH-HHHHHHHHHHHHHHHHHHH-HSTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -----cCccCCCCCCHHHHHHHcccCCc-hhhHHHHHHHHHHHHcCCC-cccccccccccCCCCCCHHHHHHHhCCHHHH
Confidence 68899999999999998 6775 7 99999999965 7 88999999999999999999999
Q ss_pred HHHHhccC
Q 043390 141 NFLAGKNF 148 (150)
Q Consensus 141 ~~L~~~~~ 148 (150)
++|+++|.
T Consensus 238 ~~Ll~~g~ 245 (256)
T 2etb_A 238 RHILQREF 245 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHhCCC
Confidence 99999885
No 45
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=2.6e-26 Score=152.82 Aligned_cols=125 Identities=28% Similarity=0.391 Sum_probs=112.3
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccc--------------cCCCcHHHHHHhhCChHHHHHHHh---hCCC
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFT--------------IYDDTVLHVAAYTKKSDLVMKLLD---ELPD 76 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~--------------~~g~~~L~~a~~~~~~~~v~~ll~---~~~~ 76 (150)
...++||.|+. .|+.+.++.|++.+.+ ++..+ ..|+||||+|+..|+.+++++|++ .|++
T Consensus 92 ~g~t~L~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~ 168 (260)
T 3jxi_A 92 RGQTALHIAIE-RRCKHYVELLVEKGAD--VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD 168 (260)
T ss_dssp ESBCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred CCCCHHHHHHH-cCCHHHHHHHHhCCCC--cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC
Confidence 45567999999 9999999999998655 55666 579999999999999999999999 8888
Q ss_pred CcccccccCCCCCChHHHHHHHcCC---------cHHHHHHHHhhCCccc-------ccccCCCCCHHHHHHHcCCHHHH
Q 043390 77 QSLDKMTRQNKAGNTILHETASSSH---------ALPVADKLFRKAPGLL-------GMRNNNGGTALLGAAHNGKIEIF 140 (150)
Q Consensus 77 ~~~~~~~~~~~~g~t~l~~a~~~g~---------~~~~~~~Ll~~~~~~~-------~~~~~~g~tpl~~a~~~g~~~~~ 140 (150)
++.+|..|+||||+|+..++ . +++++|++.|+. + +.+|..|.||||+|++.|+.+++
T Consensus 169 -----~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~-~~v~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v 241 (260)
T 3jxi_A 169 -----LRRQDSRGNTVLHALVAIADNTRENTKFVT-KMYDLLLIKCAK-LFPDTNLEALLNNDGLSPLMMAAKTGKIGIF 241 (260)
T ss_dssp -----TTCCCTTSCCHHHHHHHHCCSSHHHHHHHH-HHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -----CcccCCCCCcHHHHHHHhccCchhHHHHHH-HHHHHHHHhCcc-cccccchhhcccCCCCCHHHHHHHcCCHHHH
Confidence 68899999999999998877 4 899999999865 6 67999999999999999999999
Q ss_pred HHHHhccC
Q 043390 141 NFLAGKNF 148 (150)
Q Consensus 141 ~~L~~~~~ 148 (150)
++|+++|.
T Consensus 242 ~~Ll~~g~ 249 (260)
T 3jxi_A 242 QHIIRREI 249 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhCC
Confidence 99999885
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=7.4e-26 Score=147.77 Aligned_cols=130 Identities=18% Similarity=0.162 Sum_probs=114.0
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccc-cccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCC
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCV-FTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGN 90 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~-~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~ 90 (150)
+....++|+.|+. .|+.+.++.|+..+++.+++. .+..|+||||+|+..++.+++++|++.|... +++.++..|.
T Consensus 33 ~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~---~~~~~~~~g~ 108 (228)
T 2dzn_A 33 DQDGRIPLHWSVS-FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKP---DLNKITNQGV 108 (228)
T ss_dssp CTTSCCHHHHHHH-TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCC---CTTCCCTTCC
T ss_pred CCCCCCHHHHHHH-cCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc---ccccCCcCCC
Confidence 4455667999999 999999999999876655666 7889999999999999999999999998322 2678899999
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 043390 91 TILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKN 147 (150)
Q Consensus 91 t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~ 147 (150)
||||+|+..|+. +++++|++.|.. ++.++..|.||||+|+..|+.+++++|++.|
T Consensus 109 t~L~~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 109 TCLHLAVGKKWF-EVSQFLIENGAS-VRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163 (228)
T ss_dssp CHHHHHHHTTCH-HHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred CHHHHHHHcCCH-hHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 999999999996 999999999865 9999999999999999999999999999988
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=1.2e-25 Score=144.23 Aligned_cols=125 Identities=24% Similarity=0.220 Sum_probs=70.7
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhC-CCCcccccccCCCCCChH
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDEL-PDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~-~~~~~~~~~~~~~~g~t~ 92 (150)
...++++.|+. .|+.+.++.|+.... .+++..+..|.||||+|+..++.+++++|++.| .+ ++.+|..|.||
T Consensus 71 ~g~t~l~~A~~-~~~~~~~~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~~~~~~~g~t~ 143 (201)
T 3hra_A 71 ISDSPYLYAGA-QGRTEILAYMLKHAT-PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED-----IDFQNDFGYTA 143 (201)
T ss_dssp TSCCHHHHHHH-TTCHHHHHHHHHHSC-CCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC-----TTCCCTTSCCH
T ss_pred CCCCHHHHHHH-cCCHHHHHHHHhccC-cccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----cCCCCCCCCCH
Confidence 33445666665 666665555554322 224455555666666666666666666666655 33 45555566666
Q ss_pred HHHHHHcCC-----cHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 043390 93 LHETASSSH-----ALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKN 147 (150)
Q Consensus 93 l~~a~~~g~-----~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~ 147 (150)
||+|+..++ . +++++|++.|+. ++.+|..|.|||++|++.|+.+++++|+++|
T Consensus 144 L~~A~~~~~~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 144 LIEAVGLREGNQLYQ-DIVKLLMENGAD-QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHSSCCSHHHH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHhccchhhHH-HHHHHHHHCCCC-CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 666665554 3 566666666543 5556666666666666666666666666554
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=6.2e-26 Score=149.11 Aligned_cols=140 Identities=16% Similarity=0.076 Sum_probs=123.2
Q ss_pred CCcccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCC----CCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCC
Q 043390 2 SSIGIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPD----HSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQ 77 (150)
Q Consensus 2 ~s~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~----~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~ 77 (150)
+..|.+....+....++|+.|+. .|+.+.++.|+..+.. ..++..+..|.||||+|+..++.+++++|++.|++
T Consensus 65 l~~g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~- 142 (236)
T 1ikn_D 65 LGAGCDPELRDFRGNTPLHLACE-QGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD- 142 (236)
T ss_dssp CSCCCCSCCCCTTCCCHHHHHHH-HTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-
T ss_pred HHcCCCCCCcCCCCCCHHHHHHH-cCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 44555555555666778999999 9999999999988653 22466788999999999999999999999999998
Q ss_pred cccccccCCC-CCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 78 SLDKMTRQNK-AGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 78 ~~~~~~~~~~-~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
++.++. .|.||||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+..|+.+++++|+++|++
T Consensus 143 ----~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 209 (236)
T 1ikn_D 143 ----VNAQEPCNGRTALHLAVDLQNP-DLVSLLLKCGAD-VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209 (236)
T ss_dssp ----TTCCCTTTCCCHHHHHHHTTCH-HHHHHHHTTTCC-SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred ----CCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-CCcccCCCCCHHHHHHccCchHHHHHHHHcchh
Confidence 678887 999999999999996 999999999865 999999999999999999999999999999974
No 49
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=8.8e-26 Score=148.45 Aligned_cols=129 Identities=18% Similarity=0.168 Sum_probs=90.1
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCC--CCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCC-CCC
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPD--HSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQN-KAG 89 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~--~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~-~~g 89 (150)
....++++.|+. .|+.+.++.++...+. .+++..+..|.||||+|+..++.+++++|++.|.+ ++..+ ..|
T Consensus 77 ~~g~t~l~~A~~-~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~g 150 (241)
T 1k1a_A 77 RHGQTAAHLACE-HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD-----IDAVDIKSG 150 (241)
T ss_dssp TTSCCHHHHHHH-TTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTTC
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-----cccccccCC
Confidence 334455666666 6666666666666442 13445566667777777777777777777777666 45556 677
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 90 NTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 90 ~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.||||+|+..|+. +++++|++.|+. ++.++..|.||||+|+..|+.+++++|+++|+.
T Consensus 151 ~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 208 (241)
T 1k1a_A 151 RSPLIHAVENNSL-SMVQLLLQHGAN-VNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208 (241)
T ss_dssp CCHHHHHHHTTCH-HHHHHHHHTTCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CcHHHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence 8888888888885 888888887754 777788888888888888888888888887765
No 50
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.94 E-value=2e-26 Score=137.53 Aligned_cols=116 Identities=20% Similarity=0.147 Sum_probs=102.5
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHH
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTIL 93 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l 93 (150)
...++|+.|+. .|+.+.++.++..+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.+|..|+|||
T Consensus 6 ~~~~~l~~A~~-~~~~~~v~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~d~~g~tpL 77 (123)
T 3aaa_C 6 MCDKEFMWALK-NGDLDEVKDYVAKGED--VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-----INAPDKHHITPL 77 (123)
T ss_dssp -CHHHHHHHHH-TTCHHHHHHHHHTTCC--TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-----TTCCCTTSCCHH
T ss_pred ccchHHHHHHH-cCCHHHHHHHHHcCCC--cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCCCHH
Confidence 34467999999 9999999999998654 778899999999999999999999999999998 688999999999
Q ss_pred HHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHH
Q 043390 94 HETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEI 139 (150)
Q Consensus 94 ~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~ 139 (150)
|+|+..|+. +++++|++.++. ++.+|..|.|||++|...+..++
T Consensus 78 ~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 78 LSAVYEGHV-SCVKLLLSKGAD-KTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp HHHHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHCCCHHHHHH
T ss_pred HHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHhCCHHHHHH
Confidence 999999996 999999999865 99999999999999954444333
No 51
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=7.8e-26 Score=148.18 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=117.0
Q ss_pred ccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCC---ccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccc
Q 043390 5 GIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHS---LCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDK 81 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~---~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~ 81 (150)
|.+....+....++|+.|+. .|+.+.++.|++.+++.. .+..|..|+||||+|+..|+.+++++|++.|+++
T Consensus 27 g~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---- 101 (232)
T 2rfa_A 27 GCEVHQRGAMGETALHIAAL-YDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV---- 101 (232)
T ss_dssp CSCTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT----
T ss_pred CCCcccCCCCCCCHHHHHHH-cCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC----
Confidence 44444445566778999999 999999999999865521 2456789999999999999999999999999984
Q ss_pred cccCC-------------CCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHH----HHHH
Q 043390 82 MTRQN-------------KAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIF----NFLA 144 (150)
Q Consensus 82 ~~~~~-------------~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~----~~L~ 144 (150)
+.++ ..|.||||+|+..|+. +++++|++.|++ ++.+|..|.||||+|+..|+.+++ ++|+
T Consensus 102 -~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll 178 (232)
T 2rfa_A 102 -SARATGSVFHYRPHNLIYYGEHPLSFAACVGSE-EIVRLLIEHGAD-IRAQDSLGNTVLHILILQPNKTFACQMYNLLL 178 (232)
T ss_dssp -TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHH
T ss_pred -CcccCCcceeecccccccCCCCHHHHHHHcCCH-HHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHH
Confidence 4443 4799999999999996 999999999865 999999999999999999999988 9999
Q ss_pred hccCC
Q 043390 145 GKNFR 149 (150)
Q Consensus 145 ~~~~~ 149 (150)
++|+.
T Consensus 179 ~~g~~ 183 (232)
T 2rfa_A 179 SYDGG 183 (232)
T ss_dssp HTTCS
T ss_pred hcCCc
Confidence 98873
No 52
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=1.1e-25 Score=147.75 Aligned_cols=128 Identities=21% Similarity=0.100 Sum_probs=93.8
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++++.|+. .|+.+.++.|+..++ .+++..+..|+||||+|+..++.+++++|++.|++ ++.++..|.||
T Consensus 75 ~~g~t~L~~A~~-~~~~~~~~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~ 147 (237)
T 3b7b_A 75 AEGSTCLHLAAK-KGHYEVVQYLLSNGQ-MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-----INIRDNEENIC 147 (237)
T ss_dssp TTSCCHHHHHHH-TTCHHHHHHHHTTTC-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCH
T ss_pred CCCCcHHHHHHH-cCCHHHHHHHHhCCC-CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCccCCCCCCH
Confidence 344455777777 777777766666542 23555667777777777777777777777777776 56777788888
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.++. ++.+|..|.||||+|++.|+.+++++|+++|+.
T Consensus 148 L~~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad 202 (237)
T 3b7b_A 148 LHWAAFSGCV-DIAEILLAAKCD-LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202 (237)
T ss_dssp HHHHHHHCCH-HHHHHHHTTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred HHHHHHCCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC
Confidence 8888888885 888888888754 777888888888888888888888888888765
No 53
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=6.8e-26 Score=153.41 Aligned_cols=133 Identities=22% Similarity=0.156 Sum_probs=101.5
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccc----------
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDK---------- 81 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~---------- 81 (150)
+....++||.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..|+.+++++|+..|++++..+
T Consensus 70 ~~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 146 (299)
T 1s70_B 70 NVDGLTALHQACI-DDNVDMVKFLVENGAN--INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIA 146 (299)
T ss_dssp CTTCCBHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CCCCCCHHHHHHH-cCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHH
Confidence 3445566888888 8888888888876544 66677788888888888888888888888877642100
Q ss_pred ---------------------------------------------cccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcc
Q 043390 82 ---------------------------------------------MTRQNKAGNTILHETASSSHALPVADKLFRKAPGL 116 (150)
Q Consensus 82 ---------------------------------------------~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~ 116 (150)
....+..|.||||+|+..|+. +++++|++.|+.
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~d- 224 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT-EVLKLLIQARYD- 224 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH-HHHHHHHTTTCC-
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcH-HHHHHHHHcCCC-
Confidence 001335678888888888886 888988888855
Q ss_pred cccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 117 LGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 117 ~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
++.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 225 ~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad 257 (299)
T 1s70_B 225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCD 257 (299)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC
Confidence 888888899999999999999999999988875
No 54
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=150.06 Aligned_cols=126 Identities=19% Similarity=0.076 Sum_probs=70.0
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCCh
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNT 91 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t 91 (150)
+....++||.|+. .|+.+.++.|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|+++ + .+..|.|
T Consensus 33 ~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~-~~~~g~t 103 (261)
T 2xai_A 33 TADHVSPLHEACL-GGHLSCVKILLKHGAQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-----Q-PESDLAS 103 (261)
T ss_dssp CTTCCCHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-----S-CSCTTCC
T ss_pred CCCCCCHHHHHHH-cCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-----C-CCCCCCC
Confidence 3344555666666 6777666666666433 5556666666666666666666666666666652 1 1223445
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
|||+|+..|+. +++++|++.++. ++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 104 ~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 158 (261)
T 2xai_A 104 PIHEAARRGHV-ECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGA 158 (261)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHHcCcH-HHHHHHHHcCCC-CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 55555555553 555555555432 44455555555555555555555555555444
No 55
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=1.5e-25 Score=142.38 Aligned_cols=124 Identities=23% Similarity=0.238 Sum_probs=109.0
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCC-CCCC
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQN-KAGN 90 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~-~~g~ 90 (150)
+....++||.|+. .|+.+.++.++. +. +++..|..|+||||+|+..|+.+++++|++.|++ ++.++ ..|+
T Consensus 41 ~~~g~t~L~~A~~-~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~~g~ 111 (183)
T 3deo_A 41 VSEYETPWWTAAR-KADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-----LDHRDMRGGL 111 (183)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHTT-TS--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCSSSSC
T ss_pred CCCCCCHHHHHHH-cCCHHHHHHHHh-cC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCCC
Confidence 3455677999999 999999999998 43 4778899999999999999999999999999998 57777 8999
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHc----------------CCHHHHHHHHhc
Q 043390 91 TILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHN----------------GKIEIFNFLAGK 146 (150)
Q Consensus 91 t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~----------------g~~~~~~~L~~~ 146 (150)
||||+|+..|+. +++++|++.|+. ++.+|..|.||||+|++. |+.+++++|.++
T Consensus 112 tpL~~A~~~~~~-~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 112 TALHMAAGYVRP-EVVEALVELGAD-IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CHHHHHHHTTCH-HHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHhcCcH-HHHHHHHHcCCC-CcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999996 999999999965 999999999999998876 566777777664
No 56
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=6e-27 Score=157.06 Aligned_cols=133 Identities=23% Similarity=0.186 Sum_probs=110.9
Q ss_pred ccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccccc
Q 043390 5 GIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTR 84 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~ 84 (150)
+++....+....++++.++. .++.+.++.|+..+.+ ++.+|..|+||||+|+..|+.+++++|++.|++ ++.
T Consensus 109 ~a~~~~~~~~g~t~l~~a~~-~~~~~~~~~Ll~~g~~--~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-----vn~ 180 (269)
T 4b93_B 109 GANAGARNADQAVPLHLACQ-QGHFQVVKCLLDSNAK--PNKKDLSGNTPLIYACSGGHHELVALLLQHGAS-----INA 180 (269)
T ss_dssp TCCTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHTTCC--SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC-----TTC
T ss_pred CCCcCccCCCCCCccccccc-cChHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCc
Confidence 33333444555667999999 9999999999998655 778899999999999999999999999999998 688
Q ss_pred CCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCC-HHHHHHHHhcc
Q 043390 85 QNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGK-IEIFNFLAGKN 147 (150)
Q Consensus 85 ~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~-~~~~~~L~~~~ 147 (150)
++..|+||||+|+..|+. +++++|++.|++ ++.+|..|+||||+|+++++ .+++++|.+.+
T Consensus 181 ~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~Gad-~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~ 242 (269)
T 4b93_B 181 SNNKGNTALHEAVIEKHV-FVVELLLLHGAS-VQVLNKRQRTAVDCAEQNSKIMELLQVVPSCV 242 (269)
T ss_dssp BCTTSCBHHHHHHHTTCH-HHHHHHHHTTCC-SCCCCTTSCCSGGGSCTTCHHHHHTTC-----
T ss_pred cccCCCcHHHHHHHcCCH-HHHHHHHHCCCC-CCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhc
Confidence 999999999999999996 999999999965 99999999999999998886 35555554443
No 57
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.94 E-value=2.2e-26 Score=150.16 Aligned_cols=126 Identities=21% Similarity=0.169 Sum_probs=109.2
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhh-CCCCcccccccCCCCCChH
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDE-LPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~-~~~~~~~~~~~~~~~g~t~ 92 (150)
...+.|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..|+.+++++|+.. |++ ++.+|..|+||
T Consensus 72 ~g~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-----~~~~d~~g~tp 143 (222)
T 3ehr_A 72 SIDNPLHEAAK-RGNLSWLRECLDNRVG--VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-----LNQQNKLGDTA 143 (222)
T ss_dssp EESCHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-----CCCCCTTSCCH
T ss_pred ccccccccccc-cCcHHHHHHHHhCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-----ccccCCCCCCH
Confidence 34567999999 9999999999997554 778899999999999999999999999998 887 68899999999
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+..|+.++++.|++.|+.
T Consensus 144 L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 144 LHAAAWKGYA-DIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHHHHHHTCH-HHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HHHHHHcCCH-HHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 9999999996 999999999965 999999999999999999999999999988763
No 58
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=1.3e-25 Score=152.68 Aligned_cols=122 Identities=23% Similarity=0.218 Sum_probs=111.8
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCccc------cccCCCcHHHHHHhh---CChHHHHHHHhhCCCCcccccccCCC
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCV------FTIYDDTVLHVAAYT---KKSDLVMKLLDELPDQSLDKMTRQNK 87 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~------~~~~g~~~L~~a~~~---~~~~~v~~ll~~~~~~~~~~~~~~~~ 87 (150)
..|+.|+. .|+.+.++.++..+.+ ++. .+..|+||||+|+.. ++.+++++|+.+|++ ++.+|.
T Consensus 153 ~~L~~A~~-~g~~~~v~~ll~~g~d--~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-----vn~~d~ 224 (301)
T 2b0o_E 153 QRLWTAIC-NRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-----LDAKAA 224 (301)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHTTCC--TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----TTCCCT
T ss_pred HHHhhhhh-ccCHHHHHHHHhcCCc--ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----CCCCCC
Confidence 45999999 9999999999988666 444 588899999999997 889999999999998 688999
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 88 AGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 88 ~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
.|+||||+|+..|+. +++++|++.|++ ++.+|..|.|||++|+..|+.+++++|+++|+
T Consensus 225 ~G~TpLh~A~~~g~~-~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 225 DGNTALHYAALYNQP-DCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp TCCCHHHHHHHTTCH-HHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 999999999999996 999999999865 99999999999999999999999999998875
No 59
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=4.5e-25 Score=144.38 Aligned_cols=127 Identities=20% Similarity=0.133 Sum_probs=96.6
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++|+.|+. .|+.+.++.|++.+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.++..|.||
T Consensus 38 ~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~ 109 (231)
T 3aji_A 38 QDSRTALHWACS-AGHTEIVEFLLQLGVP--VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-----VNAVNQNGCTP 109 (231)
T ss_dssp TTSCCHHHHHHH-HTCHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCH
T ss_pred CCCCCHHHHHHH-cCcHHHHHHHHHhCCC--CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-----CCCCCCCCCCH
Confidence 344556777777 7888877777776443 566777788888888888888888888887777 56777788888
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.+.. ++.++..|.||||+|+..|+.+++++|+++|+.
T Consensus 110 L~~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 164 (231)
T 3aji_A 110 LHYAASKNRH-EIAVMLLEGGAN-PDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS 164 (231)
T ss_dssp HHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Confidence 8888888885 888888887754 777777888888888888888888888877764
No 60
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.93 E-value=1.3e-25 Score=150.61 Aligned_cols=131 Identities=19% Similarity=0.151 Sum_probs=96.8
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcc--------------
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSL-------------- 79 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~-------------- 79 (150)
...++||.|+. .|+.+.++.|+..+.+ ++..+..|+||||+|+..++.+++++|+..++....
T Consensus 44 ~g~t~L~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 120 (282)
T 1oy3_D 44 LGQTALHLAAI-LGEASTVEKLYAAGAG--VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120 (282)
T ss_dssp TSCCHHHHHHH-HTCHHHHHHHHHTTCC--SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------
T ss_pred CCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccC
Confidence 34456777777 7777777777766444 556666777777777777777777777776665211
Q ss_pred ----------------------------cccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCC-CCCHHHH
Q 043390 80 ----------------------------DKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNN-GGTALLG 130 (150)
Q Consensus 80 ----------------------------~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~-g~tpl~~ 130 (150)
..++.++..|.||||+|+..|+. +++++|++.|+. ++.++.. |.||||+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~-~~~~~~~~g~tpL~~ 198 (282)
T 1oy3_D 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA-EMVRLLRDAGAD-LNKPEPTCGRTPLHL 198 (282)
T ss_dssp -----------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHTCC-TTCCCTTTCCCHHHH
T ss_pred cchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCH-HHHHHHHHcCCC-CCCCCCCCCcCHHHH
Confidence 12456777888999999999986 899999998865 7777754 8999999
Q ss_pred HHHcCCHHHHHHHHhccCC
Q 043390 131 AAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 131 a~~~g~~~~~~~L~~~~~~ 149 (150)
|++.|+.+++++|+++|+.
T Consensus 199 A~~~~~~~~v~~Ll~~gad 217 (282)
T 1oy3_D 199 AVEAQAASVLELLLKAGAD 217 (282)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999998875
No 61
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=1.3e-25 Score=155.97 Aligned_cols=131 Identities=18% Similarity=0.098 Sum_probs=118.2
Q ss_pred hhcCHHHHHHHHhhc--CHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCC
Q 043390 13 NKINSELYNALMIKQ--DEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGN 90 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~--~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~ 90 (150)
....++|+.|+. .| +.+.++.|+..+.+ ++..|..|+||||+|+..|+.+++++|++.|++.....++.+|..|+
T Consensus 136 ~~g~t~L~~A~~-~g~~~~~~v~~Ll~~ga~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~ 212 (364)
T 3ljn_A 136 CKGQTALHWCVG-LGPEYLEMIKILVQLGAS--PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN 212 (364)
T ss_dssp ESCCCHHHHHHH-SCGGGHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCC
T ss_pred CCCCCHHHHHHH-cCCchHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCC
Confidence 345678999999 99 99999999998655 77889999999999999999999999999998743334688999999
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 91 TILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 91 t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
||||+|+..|+. +++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 213 t~L~~A~~~g~~-~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 213 SHLHWAILINWE-DVAMRFVEMGID-VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp CTTHHHHTTTCH-HHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred cHHHHHHHcCCH-HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence 999999999996 999999999965 99999999999999999999999999999875
No 62
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.1e-25 Score=158.23 Aligned_cols=127 Identities=17% Similarity=0.119 Sum_probs=103.6
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++++.|+. .|+.+.++.|+..+.+ .+..+..|+||||+|+..++.+++++|++.|.+ ++.++..|.||
T Consensus 243 ~~g~t~L~~A~~-~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~ 314 (437)
T 1n11_A 243 VQGVTPLHLAAQ-EGHAEMVALLLSKQAN--GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM-----VDATTRMGYTP 314 (437)
T ss_dssp TTCCCHHHHHHH-TTCHHHHHHHHTTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCCCSSCCCH
T ss_pred CCCCCHHHHHHH-CCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc-----CCCCCCCCCCH
Confidence 334556777777 7777777777776444 566777888888888888888888888888877 67788889999
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.|+. ++.++..|.||||+|+..|+.+++++|+++|+.
T Consensus 315 L~~A~~~g~~-~~v~~Ll~~gad-~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~ 369 (437)
T 1n11_A 315 LHVASHYGNI-KLVKFLLQHQAD-VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS 369 (437)
T ss_dssp HHHHHHSSCS-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCcH-HHHHHHHhcCCC-CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC
Confidence 9999999997 899999998865 888899999999999999999999999998875
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=3.6e-25 Score=156.98 Aligned_cols=136 Identities=22% Similarity=0.193 Sum_probs=101.3
Q ss_pred cccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccc
Q 043390 4 IGIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMT 83 (150)
Q Consensus 4 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~ 83 (150)
+|++....+....++|+.|+. .|+.+.++.|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++ ++
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~-~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~ 74 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASF-MGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK-----VN 74 (437)
T ss_dssp ------------CCHHHHHHH-HTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCC-----SS
T ss_pred CCCCccccCCCCCCHHHHHHH-CCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CC
Confidence 344444445556667888888 8888888888887544 567788888888888888888888888888887 57
Q ss_pred cCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 84 RQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 84 ~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.++..|.||||+|+..|+. +++++|++.|+. ++..+..|.||||+|+..|+.+++++|+++++.
T Consensus 75 ~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 138 (437)
T 1n11_A 75 AKAKDDQTPLHCAARIGHT-NMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEAS 138 (437)
T ss_dssp CCCTTSCCHHHHHHHHTCH-HHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCHHHHHHHCCCH-HHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Confidence 7888888888888888886 888888888854 777888888888888888888888888877653
No 64
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.93 E-value=6.2e-25 Score=144.24 Aligned_cols=123 Identities=19% Similarity=0.159 Sum_probs=59.8
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHH
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHET 96 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a 96 (150)
++|+.|+. .|+.+.++.|++.+.+ ++..+..|+||||+|+..|+.+++++|++.|++ ++.++..|.||||+|
T Consensus 13 t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A 84 (237)
T 3b7b_A 13 SPLHAAAE-AGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-----VDPKDAEGSTCLHLA 84 (237)
T ss_dssp CHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----CCCCCTTSCCHHHHH
T ss_pred CHHHHHHH-cCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHH
Confidence 34555555 5555555555554332 344455555555555555555555555555544 334444444444444
Q ss_pred HHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 97 ASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 97 ~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
+..|+. +++++|++.+..+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 85 ~~~~~~-~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 135 (237)
T 3b7b_A 85 AKKGHY-EVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGS 135 (237)
T ss_dssp HHTTCH-HHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHcCCH-HHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 444443 444444444433344444444444444444444444444444443
No 65
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=7.4e-26 Score=152.21 Aligned_cols=127 Identities=22% Similarity=0.215 Sum_probs=101.7
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCC-CC------------------------------------CccccccCCCcHH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVP-DH------------------------------------SLCVFTIYDDTVL 55 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~-~~------------------------------------~~~~~~~~g~~~L 55 (150)
....++||.|+. .|+.+.++.|++.+. +. ..+..+..|+|||
T Consensus 109 ~~g~T~Lh~A~~-~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL 187 (276)
T 4hbd_A 109 SNGNTALHYSVS-HANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTAL 187 (276)
T ss_dssp TTSCCHHHHHHH-TTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHH
T ss_pred CCCCCHHHHHHH-CCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHH
Confidence 445566888888 888888888887754 21 1223355688889
Q ss_pred HHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHh-hCCcccccccCCCCCHHHHHHHc
Q 043390 56 HVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFR-KAPGLLGMRNNNGGTALLGAAHN 134 (150)
Q Consensus 56 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~-~~~~~~~~~~~~g~tpl~~a~~~ 134 (150)
|+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+. +++++|++ .| .+++.+|..|.|||++|+..
T Consensus 188 h~A~~~g~~~~v~~Ll~~gad-----~n~~d~~G~TpLh~A~~~g~~-~iv~~Ll~~~g-ad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 188 MLAVSHGRVDVVKALLACEAD-----VNVQDDDGSTALMCACEHGHK-EIAGLLLAVPS-CDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTCH-HHHHHHHTSTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHHCCCH-HHHHHHHhcCC-CCCcCcCCCCCCHHHHHHHc
Confidence 999999999999999999888 678888999999999999996 89999998 55 44888899999999999999
Q ss_pred CCHHHHHHHHhcc
Q 043390 135 GKIEIFNFLAGKN 147 (150)
Q Consensus 135 g~~~~~~~L~~~~ 147 (150)
|+.+++++|+++.
T Consensus 261 g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 261 GQSEIASMLYSRM 273 (276)
T ss_dssp TCHHHHHHHHHHC
T ss_pred CCHHHHHHHHhcc
Confidence 9999999988764
No 66
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=6.1e-26 Score=149.69 Aligned_cols=126 Identities=17% Similarity=0.164 Sum_probs=88.4
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHH
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTIL 93 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l 93 (150)
...++|+.|+. .++.+.++.++..+.+... +..|.||||.|+..|+.+++++|+..|++ ++.+|..|.|||
T Consensus 4 ~g~t~L~~a~~-~~~~~~~~~ll~~g~~~~~---~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~~g~t~L 74 (239)
T 1ycs_B 4 TGQVSLPPGKR-TNLRKTGSERIAHGMRVKF---NPLPLALLLDSSLEGEFDLVQRIIYEVDD-----PSLPNDEGITAL 74 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-----CCCCCTTSCCHH
T ss_pred cccccCchhhh-hhhHHHHHHHhccCCCccc---CchhhHHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHH
Confidence 34567999999 9999999999998766433 47789999999999999999999999998 688999999999
Q ss_pred HHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 94 HETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 94 ~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|+|+..|+. +++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|+.+
T Consensus 75 ~~A~~~g~~-~~v~~Ll~~ga~-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 129 (239)
T 1ycs_B 75 HNAVCAGHT-EIVKFLVQFGVN-VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV 129 (239)
T ss_dssp HHHHHHTCH-HHHHHHHHHTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHcCCH-HHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 999999996 999999999965 9999999999999999999999999999999864
No 67
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=2.8e-25 Score=148.16 Aligned_cols=134 Identities=14% Similarity=0.079 Sum_probs=116.5
Q ss_pred ccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccccc
Q 043390 5 GIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTR 84 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~ 84 (150)
|.+....+....++++.|+. .|+.+.++.|++.+.+.. .+..|.||||+|+..|+.+++++|++.|++ ++.
T Consensus 59 g~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~ 129 (261)
T 2xai_A 59 GAQVNGVTADWHTPLFNACV-SGSWDCVNLLLQHGASVQ---PESDLASPIHEAARRGHVECVNSLIAYGGN-----IDH 129 (261)
T ss_dssp TCCTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHTTCCSS---CSCTTCCHHHHHHHTTCHHHHHHHHHTTCC-----TTC
T ss_pred CCCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHCCCCCC---CCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----CCc
Confidence 44444445556678999999 999999999999876633 255699999999999999999999999998 688
Q ss_pred CCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 85 QNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 85 ~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
++..|.||||+|+..|+. +++++|++.|+. ++. +..|.||||+|+..|+.+++++|+++|+.+
T Consensus 130 ~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~ 192 (261)
T 2xai_A 130 KISHLGTPLYLACENQQR-ACVKKLLESGAD-VNQ-GKGQDSPLHAVARTASEELACLLMDFGADT 192 (261)
T ss_dssp CBTTTBCHHHHHHHTTCH-HHHHHHHHHTCC-TTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCHHHHHHHhCCH-HHHHHHHHcCCC-CCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999996 999999999965 774 888999999999999999999999999863
No 68
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=3.9e-25 Score=149.30 Aligned_cols=57 Identities=18% Similarity=0.091 Sum_probs=28.0
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCC
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPD 76 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~ 76 (150)
++|+.|+. .|+.+.++.|+..+.+ ++.+|..|+||||+|+..|+.+++++|++.|++
T Consensus 61 t~L~~Aa~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~ 117 (285)
T 3d9h_A 61 SPMHEAAI-HGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ 117 (285)
T ss_dssp CHHHHHHH-TTCHHHHHHHHHTTCC--SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHH-cCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC
Confidence 33555555 5555555555544322 344445555555555555555555555555444
No 69
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.8e-25 Score=147.95 Aligned_cols=124 Identities=23% Similarity=0.238 Sum_probs=110.9
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCC-CCCCh
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQN-KAGNT 91 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~-~~g~t 91 (150)
....++||.|+. .|+.+.++.|+. +. +++.+|..|+||||+|+..|+.+++++|+.+|++ ++.++ ..|+|
T Consensus 43 ~~g~t~L~~A~~-~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~~g~t 113 (244)
T 3ui2_A 43 SEYETPWWTAAR-KADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-----LDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHT-TTCHHHHHHTTT-TC--CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCSSSCCC
T ss_pred cCCCCHHHHHHH-cCCHHHHHHHHc-CC--CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCcCCCCCCCC
Confidence 445678999999 999999999988 43 4788999999999999999999999999999998 57777 78999
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHH----------------HcCCHHHHHHHHhcc
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAA----------------HNGKIEIFNFLAGKN 147 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~----------------~~g~~~~~~~L~~~~ 147 (150)
|||+|+..|+. +++++|++.|+. ++.+|..|.||||+|+ ..|+.+++++|++++
T Consensus 114 ~L~~A~~~g~~-~~v~~Ll~~ga~-~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 114 ALHMAAGYVRP-EVVEALVELGAD-IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHCCCC-CCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 99999999996 999999999865 9999999999999888 668899999998754
No 70
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=6.5e-26 Score=150.66 Aligned_cols=131 Identities=17% Similarity=0.151 Sum_probs=111.4
Q ss_pred hhhhcCHHHHHHHHhh---cCHHHHHHHHHhCCCCC---------ccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCc
Q 043390 11 AKNKINSELYNALMIK---QDEQKVIELCRKVPDHS---------LCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQS 78 (150)
Q Consensus 11 ~~~~~~~~l~~a~~~~---~~~~~~~~ll~~~~~~~---------~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~ 78 (150)
.+....++||.|+. . |+.+.++.|++.+.+.. ....|..|+||||+|+..|+.+++++|++.|++
T Consensus 39 ~d~~g~t~L~~A~~-~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-- 115 (256)
T 2etb_A 39 EGSTGKTCLMKAVL-NLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-- 115 (256)
T ss_dssp BTTTTBCHHHHHHH-TCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred CCCCCCCHHHHHHH-ccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC--
Confidence 34556678999999 9 99999999998754422 112346799999999999999999999999998
Q ss_pred ccccccCCCC-------------CChHHHHHHHcCCcHHHHHHHHh---hCCcccccccCCCCCHHHHHHH--cCCHH--
Q 043390 79 LDKMTRQNKA-------------GNTILHETASSSHALPVADKLFR---KAPGLLGMRNNNGGTALLGAAH--NGKIE-- 138 (150)
Q Consensus 79 ~~~~~~~~~~-------------g~t~l~~a~~~g~~~~~~~~Ll~---~~~~~~~~~~~~g~tpl~~a~~--~g~~~-- 138 (150)
++.++.. |.||||+|+..|+. +++++|++ .|++ ++.+|..|+||||+|+. .++.+
T Consensus 116 ---~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~~~~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~ 190 (256)
T 2etb_A 116 ---VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW-DVVTYLLENPHQPAS-LEATDSLGNTVLHALVMIADNSPENS 190 (256)
T ss_dssp ---TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH-HHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred ---CCcccccccccccccccccCCCCHHHHHHHcCCH-HHHHHHHhccccCCC-cCccCCCCCCHHHHHHHcccCCchhh
Confidence 4666665 99999999999996 99999999 7754 99999999999999999 88888
Q ss_pred -----HHHHHHhccCC
Q 043390 139 -----IFNFLAGKNFR 149 (150)
Q Consensus 139 -----~~~~L~~~~~~ 149 (150)
++++|+++|++
T Consensus 191 ~~~~~iv~~Ll~~ga~ 206 (256)
T 2etb_A 191 ALVIHMYDGLLQMGAR 206 (256)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC
Confidence 99999998763
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.93 E-value=4.2e-25 Score=149.14 Aligned_cols=125 Identities=19% Similarity=0.151 Sum_probs=109.3
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....++||.|+. .|+.+.++.|+..+.+ ++.. +|+||||+|+..|+.+++++|++.|++ ++.+|..|.||
T Consensus 29 ~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~t~ 98 (285)
T 3kea_A 29 VHGHSASYYAIA-DNNVRLVCTLLNAGAL--KNLL--ENEFPLHQAATLEDTKIVKILLFSGLD-----DSQFDDKGNTA 98 (285)
T ss_dssp TTSCCHHHHHHH-TTCHHHHHHHHHTTGG--GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCC-----TTCCCTTSCCH
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHhCCCC--CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCcH
Confidence 345567999999 9999999999998544 3333 589999999999999999999999988 67889999999
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCC-CCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNG-GTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g-~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||+|+..|+. +++++|++.|+. ++.++..| .||||+|+..|+.+++++|+++|+.
T Consensus 99 L~~A~~~g~~-~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~ 154 (285)
T 3kea_A 99 LYYAVDSGNM-QTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS 154 (285)
T ss_dssp HHHHHHTTCH-HHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT
T ss_pred HHHHHHcCCH-HHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc
Confidence 9999999996 999999999865 89999988 7999999999999999999998864
No 72
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.1e-24 Score=144.73 Aligned_cols=124 Identities=23% Similarity=0.202 Sum_probs=113.8
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCcccc-ccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVF-TIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~-~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
.+.|+.|+. .|+.+.++.+++.+++ ++.. +..|+||||+|+..|+.+++++|++.|++ ++.++..|.||||
T Consensus 6 ~~~L~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~ 77 (285)
T 1wdy_A 6 NHLLIKAVQ-NEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-----PVLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHH
T ss_pred chHHHHHHH-cCCHHHHHHHHHcCCC--cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHH
Confidence 456999999 9999999999998765 4555 78899999999999999999999999998 5788999999999
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+|+..|+. +++++|++.++. ++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 78 ~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 130 (285)
T 1wdy_A 78 LAAIAGSV-KLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130 (285)
T ss_dssp HHHHHTCH-HHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCH-HHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence 99999996 999999999965 999999999999999999999999999999875
No 73
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.93 E-value=2.2e-24 Score=141.76 Aligned_cols=129 Identities=17% Similarity=0.213 Sum_probs=79.5
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
..++|+.|+. .|+.+.++.|++.+.+ ++..+..|+||||+|+..++.+++++|+..+..... .++..+..|.||||
T Consensus 46 g~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~-~~~~~~~~g~t~L~ 121 (241)
T 1k1a_A 46 RQTPLHLAVI-TTLPSVVRLLVTAGAS--PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL-DLEARNYDGLTALH 121 (241)
T ss_dssp SCCHHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSC-CTTCCCTTSCCHHH
T ss_pred CCCHHHHHHH-cCCHHHHHHHHHcCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccccCcCCCcHHH
Confidence 3445666666 6666666666655333 445556666666666666666666666666541100 14556666777777
Q ss_pred HHHHcCCcHHHHHHHHhhCCccccccc-CCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRN-NNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~-~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+|+..|+. +++++|++.+.. ++..+ ..|.||||+|+..|+.+++++|+++|+.
T Consensus 122 ~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 175 (241)
T 1k1a_A 122 VAVNTECQ-ETVQLLLERGAD-IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN 175 (241)
T ss_dssp HHHHHTCH-HHHHHHHHTTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCH-HHHHHHHHcCCC-cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777774 777777777644 55555 5677777777777777777777776654
No 74
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=2.3e-24 Score=148.37 Aligned_cols=65 Identities=26% Similarity=0.284 Sum_probs=45.5
Q ss_pred ccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 83 TRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 83 ~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
+.++..|.||||+|+..|+. +++++|++.|+. ++.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 241 ~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~ga~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad 305 (351)
T 3utm_A 241 NEKNKDFMTPLHVAAERAHN-DVMEVLHKHGAK-MNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CCcCCCCCCHHHHHHHcCCH-HHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 44566677777777777775 777777777644 777777777777777777777777777777664
No 75
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.93 E-value=2.1e-25 Score=153.27 Aligned_cols=139 Identities=20% Similarity=0.134 Sum_probs=116.7
Q ss_pred cccccch-hhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCC---hHHHHHHHhhCCCCcc
Q 043390 4 IGIEETD-AKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKK---SDLVMKLLDELPDQSL 79 (150)
Q Consensus 4 ~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~---~~~v~~ll~~~~~~~~ 79 (150)
.|++... .+....++||.|+. .|+.+.++.|++.+.+ ++.+|..|+||||+|+..|+ .++++.|+..+..
T Consensus 119 ~g~dvn~~~d~~g~TpLh~Aa~-~g~~~~v~~Ll~~Gad--~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~--- 192 (327)
T 1sw6_A 119 TQLNLNIPVDEHGNTPLHWLTS-IANLELVKHLVKHGSN--RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP--- 192 (327)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHH-TTCHHHHHHHHHTTCC--TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---
T ss_pred cCCCcccccCCCCCcHHHHHHH-cCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhc---
Confidence 3444444 45666778999999 9999999999998655 77899999999999999998 6777888877632
Q ss_pred cccccCCCCCChHHHHHHH----cCCcHHHHHHHHhhCCc----------------------------------------
Q 043390 80 DKMTRQNKAGNTILHETAS----SSHALPVADKLFRKAPG---------------------------------------- 115 (150)
Q Consensus 80 ~~~~~~~~~g~t~l~~a~~----~g~~~~~~~~Ll~~~~~---------------------------------------- 115 (150)
+++.+|..|+||||+|+. .|+. +++++|++.+..
T Consensus 193 -~~~~~d~~g~tpLh~A~~~~~~~g~~-~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~ 270 (327)
T 1sw6_A 193 -CLILEDSMNRTILHHIIITSGMTGCS-AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 270 (327)
T ss_dssp -GGGEECTTCCCHHHHHHHHHTSTTCH-HHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred -cccCCCCCCCCHHHHHHHHccccccH-HHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHH
Confidence 278899999999999999 8886 999999877420
Q ss_pred ----ccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 116 ----LLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 116 ----~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
+++.+|..|+||||+|++.|+.+++++|+++|+.+
T Consensus 271 Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~ 309 (327)
T 1sw6_A 271 IIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 309 (327)
T ss_dssp HHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCT
T ss_pred HHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 37888999999999999999999999999999863
No 76
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.93 E-value=7.8e-25 Score=152.30 Aligned_cols=122 Identities=18% Similarity=0.189 Sum_probs=112.1
Q ss_pred HHHHHHHHhh-cCHHHHHHHHHhCCCCCccccc--cCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHH
Q 043390 17 SELYNALMIK-QDEQKVIELCRKVPDHSLCVFT--IYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTIL 93 (150)
Q Consensus 17 ~~l~~a~~~~-~~~~~~~~ll~~~~~~~~~~~~--~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l 93 (150)
+.||.|+. . ++.+.++.|+..+.+ ++..+ ..|+||||+|+..++.+++++|+.+|++ ++.+|..|+|||
T Consensus 201 t~L~~Aa~-~~g~~~~v~~LL~~Gad--vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-----vn~~d~~G~TpL 272 (368)
T 3jue_A 201 ALLFRASG-HPPSLPTMADALAHGAD--VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-----VNQADSAGRGPL 272 (368)
T ss_dssp HHHHHHTS-SSCCHHHHHHHHHTTCC--TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHH
T ss_pred cHHHHHHH-ccCCHHHHHHHHHcCCC--CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCCCCCCCCCHH
Confidence 36889998 8 999999999998766 55555 8899999999999999999999999998 688999999999
Q ss_pred HHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 94 HETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 94 ~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
|+|+..|+. +++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus 273 h~A~~~g~~-~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 273 HHATILGHT-GLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHcCcH-HHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 999999996 999999999965 99999999999999999999999999998764
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1e-24 Score=146.20 Aligned_cols=129 Identities=18% Similarity=0.149 Sum_probs=115.4
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCC----hHHHHHHHhhCCCCcccccccCCCCC
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKK----SDLVMKLLDELPDQSLDKMTRQNKAG 89 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~----~~~v~~ll~~~~~~~~~~~~~~~~~g 89 (150)
...++++.|+. .|+.+.++.|+... +.+++..+..|+||||+|+..++ .+++++|+..|++ ++.++..|
T Consensus 147 ~g~t~L~~A~~-~~~~~~v~~Ll~~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~-----~~~~~~~g 219 (285)
T 1wdy_A 147 GGATALMDAAE-KGHVEVLKILLDEM-GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-----VNVRGERG 219 (285)
T ss_dssp CCCCHHHHHHH-HTCHHHHHHHHHTS-CCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC-----SSCCCTTS
T ss_pred CCCcHHHHHHH-cCCHHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC-----CCCcCCCC
Confidence 34567999999 99999999999862 23377889999999999999999 8999999999998 68899999
Q ss_pred ChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 90 NTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 90 ~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
.||||+|+..|+. +++++|++..+.+++.+|..|.||||+|++.|+.+++++|+++|+.+
T Consensus 220 ~t~L~~A~~~~~~-~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 220 KTPLILAVEKKHL-GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp CCHHHHHHHTTCH-HHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred CcHHHHHHHcCCH-HHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 9999999999996 99999999444559999999999999999999999999999999863
No 78
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=2.7e-24 Score=145.58 Aligned_cols=124 Identities=25% Similarity=0.348 Sum_probs=109.6
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.+.|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+
T Consensus 41 ~t~l~~A~~-~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 41 GAVFLAACS-SGDTEEVLRLLERGAD--INYANVDGLTALHQACIDDNVDMVKFLVENGAN-----INQPDNEGWIPLHA 112 (299)
T ss_dssp HHHHHHHHH-HTCHHHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHH
T ss_pred ccHHHHHHH-cCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCcHHHH
Confidence 456999999 9999999999998655 778899999999999999999999999999998 68899999999999
Q ss_pred HHHcCCcHHHHHHHHhhCCccccccc------------------------------------------------------
Q 043390 96 TASSSHALPVADKLFRKAPGLLGMRN------------------------------------------------------ 121 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~~~~~~~~------------------------------------------------------ 121 (150)
|+..|+. +++++|++.|+. ++..+
T Consensus 113 A~~~g~~-~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 113 AASCGYL-DIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHcCCH-HHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 9999996 999999999854 55444
Q ss_pred ------CCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 122 ------NNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 122 ------~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
..|.||||+|+..|+.+++++|+++|+.
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d 224 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCC
Confidence 3577888889999999999999988875
No 79
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.7e-24 Score=146.10 Aligned_cols=135 Identities=19% Similarity=0.070 Sum_probs=117.9
Q ss_pred ccccchhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccccc
Q 043390 5 GIEETDAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTR 84 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~ 84 (150)
|.+....+....++|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..++.+++++|++.|+++ +.
T Consensus 82 g~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~~ 153 (285)
T 3d9h_A 82 GWAVNIITADHVSPLHEACL-GGHLSCVKILLKHGAQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASV-----QP 153 (285)
T ss_dssp TCCSCEECTTCCCHHHHHHH-TTCHHHHHHHHHTTCC--SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-----SC
T ss_pred CCCCCCcCCCCCCHHHHHHH-CCcHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-----CC
Confidence 33333444556778999999 9999999999998544 7788999999999999999999999999999883 33
Q ss_pred CCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 85 QNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 85 ~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
+..|.||||+|+..|+. +++++|++.++. ++.+|..|.||||+|+..|+.+++++|+++|+.+
T Consensus 154 -~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 216 (285)
T 3d9h_A 154 -ESDLASPIHEAARRGHV-ECVNSLIAYGGN-IDHKISHLGTPLYLACENQQRACVKKLLESGADV 216 (285)
T ss_dssp -SCTTSCHHHHHHHHTCH-HHHHHHHHTTCC-TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred -CCCCCCHHHHHHHcCCH-HHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCC
Confidence 44599999999999996 999999999965 9999999999999999999999999999999763
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=9.5e-25 Score=151.64 Aligned_cols=135 Identities=16% Similarity=0.077 Sum_probs=95.3
Q ss_pred hhhhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcc----------
Q 043390 10 DAKNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSL---------- 79 (150)
Q Consensus 10 ~~~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~---------- 79 (150)
..+....++||.|+. .|+.+.++.|++.+.+ ++..|..|+||||+|+..|+.+++++|++.|++.+.
T Consensus 15 ~~d~~g~t~L~~Aa~-~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A 91 (364)
T 3ljn_A 15 KSDDENMEKIHVAAR-KGQTDEVRRLIETGVS--PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLA 91 (364)
T ss_dssp -CCHHHHHHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHH
T ss_pred ccCCCCCCHHHHHHH-cCCHHHHHHHHHcCCC--ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHH
Confidence 334455566888888 8888888888877544 667777888888888888888888888887765311
Q ss_pred --------------------cccc-----------------cCCCCCChHHHHHHHcC--CcHHHHHHHHhhCCcccccc
Q 043390 80 --------------------DKMT-----------------RQNKAGNTILHETASSS--HALPVADKLFRKAPGLLGMR 120 (150)
Q Consensus 80 --------------------~~~~-----------------~~~~~g~t~l~~a~~~g--~~~~~~~~Ll~~~~~~~~~~ 120 (150)
...+ .++..|.||||+|+..| +. +++++|++.|+. ++.+
T Consensus 92 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~-~~v~~Ll~~ga~-~~~~ 169 (364)
T 3ljn_A 92 VMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYL-EMIKILVQLGAS-PTAK 169 (364)
T ss_dssp HHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGH-HHHHHHHHHTCC-TTCC
T ss_pred HHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchH-HHHHHHHHcCCC-Cccc
Confidence 0001 15666777777777777 65 777777777754 7777
Q ss_pred cCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 121 NNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 121 ~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|..|.||||+|+..|+.+++++|+++|+.
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 198 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPS 198 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 77777777777777777777777776654
No 81
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.93 E-value=8e-25 Score=147.18 Aligned_cols=129 Identities=19% Similarity=0.255 Sum_probs=110.1
Q ss_pred HHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCC-CCcc-----------------
Q 043390 18 ELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELP-DQSL----------------- 79 (150)
Q Consensus 18 ~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~-~~~~----------------- 79 (150)
.++.++. .++.+.++.++....+..++..|..|+||||+|+..|+.+++++|++.|+ +.+.
T Consensus 79 ~l~~a~~-~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~ 157 (276)
T 4hbd_A 79 DAHPELV-RRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL 157 (276)
T ss_dssp TCCHHHH-HHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC
T ss_pred CCCHHHH-HHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh
Confidence 4678888 99999999998876555577889999999999999999999999999997 4211
Q ss_pred ----------------cccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHH
Q 043390 80 ----------------DKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFL 143 (150)
Q Consensus 80 ----------------~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L 143 (150)
...+..+..|.||||+|+..|+. +++++|++.|++ ++.+|..|+||||+|+..|+.+++++|
T Consensus 158 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~-~~v~~Ll~~gad-~n~~d~~G~TpLh~A~~~g~~~iv~~L 235 (276)
T 4hbd_A 158 KTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRV-DVVKALLACEAD-VNVQDDDGSTALMCACEHGHKEIAGLL 235 (276)
T ss_dssp CSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred hhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH-HHHHHHHhCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHH
Confidence 02234566799999999999996 999999999865 999999999999999999999999999
Q ss_pred Hh-ccCC
Q 043390 144 AG-KNFR 149 (150)
Q Consensus 144 ~~-~~~~ 149 (150)
++ .|+.
T Consensus 236 l~~~gad 242 (276)
T 4hbd_A 236 LAVPSCD 242 (276)
T ss_dssp HTSTTCC
T ss_pred HhcCCCC
Confidence 98 7765
No 82
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=1.1e-25 Score=149.77 Aligned_cols=129 Identities=18% Similarity=0.163 Sum_probs=110.8
Q ss_pred hhcCHHHHHHH---HhhcCHHHHHHHHHhCCC---------CCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccc
Q 043390 13 NKINSELYNAL---MIKQDEQKVIELCRKVPD---------HSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLD 80 (150)
Q Consensus 13 ~~~~~~l~~a~---~~~~~~~~~~~ll~~~~~---------~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~ 80 (150)
....++||.|+ . .|+.+.++.|+..+.+ ...+..|..|+||||+|+..|+.+++++|++.|++
T Consensus 44 ~~g~t~L~~A~~~~~-~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---- 118 (260)
T 3jxi_A 44 STGKTCLPKALLNLS-AGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD---- 118 (260)
T ss_dssp TTCCCHHHHHHTSCB-TTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred CCCCcHHHHHHHHhh-cCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC----
Confidence 44667899999 6 6999999999987432 22444566899999999999999999999999998
Q ss_pred ccccCC--------------CCCChHHHHHHHcCCcHHHHHHHHh---hCCcccccccCCCCCHHHHHHHcCC-------
Q 043390 81 KMTRQN--------------KAGNTILHETASSSHALPVADKLFR---KAPGLLGMRNNNGGTALLGAAHNGK------- 136 (150)
Q Consensus 81 ~~~~~~--------------~~g~t~l~~a~~~g~~~~~~~~Ll~---~~~~~~~~~~~~g~tpl~~a~~~g~------- 136 (150)
++.++ ..|.||||+|+..|+. +++++|++ .|+. ++.+|..|+||||+|+..++
T Consensus 119 -~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~~~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~ 195 (260)
T 3jxi_A 119 -VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP-HIVHYLTENGHKQAD-LRRQDSRGNTVLHALVAIADNTRENTK 195 (260)
T ss_dssp -TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH-HHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHH
T ss_pred -cCccccccccCcccccccccCCCCHHHHHHHcCCH-HHHHHHHhccccCCC-CcccCCCCCcHHHHHHHhccCchhHHH
Confidence 56666 6899999999999996 99999999 7754 99999999999999998887
Q ss_pred --HHHHHHHHhccCC
Q 043390 137 --IEIFNFLAGKNFR 149 (150)
Q Consensus 137 --~~~~~~L~~~~~~ 149 (150)
.+++++|+++|++
T Consensus 196 ~~~~~v~~Ll~~ga~ 210 (260)
T 3jxi_A 196 FVTKMYDLLLIKCAK 210 (260)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcc
Confidence 7999999998763
No 83
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=2e-24 Score=150.74 Aligned_cols=130 Identities=17% Similarity=0.098 Sum_probs=105.1
Q ss_pred hhhcCHHHHHHHHhhc---CHHHHHHHHHhCCCCCc------cccccCCCcHHHHHHhhCChHHHHHHHhhC-CCCcccc
Q 043390 12 KNKINSELYNALMIKQ---DEQKVIELCRKVPDHSL------CVFTIYDDTVLHVAAYTKKSDLVMKLLDEL-PDQSLDK 81 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~---~~~~~~~ll~~~~~~~~------~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~-~~~~~~~ 81 (150)
+....++|+.|+. .+ +.+.++.|+..+.+.+. +..|..|+||||+|+..|+.+++++|+..+ .+
T Consensus 232 d~~g~t~L~~A~~-~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----- 305 (373)
T 2fo1_E 232 DRNGMTALMIVAH-NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN----- 305 (373)
T ss_dssp CTTSCCHHHHHHH-SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCC-----
T ss_pred CCCCCCHHHHHHH-hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCC-----
Confidence 3445566888888 76 67788888887655332 125668899999999999999999999876 55
Q ss_pred cccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 82 MTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 82 ~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
++.+|..|.||||+|+..|+. +++++|++.|+. ++.+|..|.|||++|+..|+.+++++|++++++
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~gad-~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGRI-EVVMYLIQQGAS-VEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTCH-HHHHHHHHTTCC-SSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred ccCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-ccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 688899999999999999996 999999999865 888999999999999999999999999988875
No 84
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.92 E-value=3.5e-25 Score=149.55 Aligned_cols=124 Identities=20% Similarity=0.143 Sum_probs=77.4
Q ss_pred hcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCC-CcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCC-CCCh
Q 043390 14 KINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYD-DTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNK-AGNT 91 (150)
Q Consensus 14 ~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g-~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~-~g~t 91 (150)
...++|+.|+. .|+.+.++.|+..+.+ ++..+..| .||||+|+..|+.+++++|+..|++. .+. .|.|
T Consensus 94 ~g~t~L~~A~~-~g~~~~v~~Ll~~ga~--~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~-------~~~~~g~t 163 (285)
T 3kea_A 94 KGNTALYYAVD-SGNMQTVKLFVKKNWR--LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST-------FDLAILLS 163 (285)
T ss_dssp TSCCHHHHHHH-TTCHHHHHHHHHHCGG--GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT-------CCCSTHHH
T ss_pred CCCcHHHHHHH-cCCHHHHHHHHhcCCC--CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc-------ccccCCcc
Confidence 33445555555 5555555555555322 44555555 45566665555555555555555441 222 6667
Q ss_pred HHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCH-HHHHHHcCCHHHHHHHHhccCC
Q 043390 92 ILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTA-LLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tp-l~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|||+|+..|+. +++++|++.|+. ++.++..|+|| ||+|+..|+.+++++|+++|+.
T Consensus 164 ~L~~A~~~g~~-~~v~~Ll~~gad-~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad 220 (285)
T 3kea_A 164 CIHITIKNGHV-DMMILLLDYMTS-TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN 220 (285)
T ss_dssp HHHHHHHTTCH-HHHHHHHHHHHH-TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC
T ss_pred HHHHHHHcChH-HHHHHHHHcCCC-CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Confidence 77777777775 777777777643 77777777776 7777777777777777777765
No 85
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.92 E-value=1.3e-24 Score=145.62 Aligned_cols=130 Identities=16% Similarity=0.191 Sum_probs=111.0
Q ss_pred hhhcCHHHHHHHHhh---cCHHHHHHHHHhCCC---------CCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcc
Q 043390 12 KNKINSELYNALMIK---QDEQKVIELCRKVPD---------HSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSL 79 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~---~~~~~~~~ll~~~~~---------~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~ 79 (150)
+....++|+.|+. . |+.+.++.|+..+.+ ......|..|+||||+|+..|+.+++++|++.|++
T Consensus 51 ~~~g~tpL~~A~~-~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~--- 126 (273)
T 2pnn_A 51 PETGKTCLLKAML-NLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD--- 126 (273)
T ss_dssp TTTCCCHHHHHHH-SCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred CcCCCCHHHHHHH-HHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC---
Confidence 3456678999998 7 999999999987532 11223567899999999999999999999999998
Q ss_pred cccccCCC--------------CCChHHHHHHHcCCcHHHHHHHHh---hCCcccccccCCCCCHHHHHHHcCC------
Q 043390 80 DKMTRQNK--------------AGNTILHETASSSHALPVADKLFR---KAPGLLGMRNNNGGTALLGAAHNGK------ 136 (150)
Q Consensus 80 ~~~~~~~~--------------~g~t~l~~a~~~g~~~~~~~~Ll~---~~~~~~~~~~~~g~tpl~~a~~~g~------ 136 (150)
++.++. .|.||||+|+..|+. +++++|++ .|+. ++.+|..|+||||+|+..|+
T Consensus 127 --~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~-~~v~~Ll~~~~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~ 202 (273)
T 2pnn_A 127 --VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQL-AIVKFLLQNSWQPAD-ISARDSVGNTVLHALVEVADNTVDNT 202 (273)
T ss_dssp --TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCH-HHHHHHHHCSSCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred --cCccccccccccccccccccCCCCHHHHHHHcCCH-HHHHHHHhcccCCCC-ceeeCCCCCcHHHHHHHccCcchhHH
Confidence 466665 799999999999996 99999999 7754 99999999999999999998
Q ss_pred ---HHHHHHHHhccCC
Q 043390 137 ---IEIFNFLAGKNFR 149 (150)
Q Consensus 137 ---~~~~~~L~~~~~~ 149 (150)
.+++++|+++|+.
T Consensus 203 ~~~~~~v~~Ll~~ga~ 218 (273)
T 2pnn_A 203 KFVTSMYNEILILGAK 218 (273)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhh
Confidence 7999999998763
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=2.7e-24 Score=130.46 Aligned_cols=98 Identities=24% Similarity=0.297 Sum_probs=92.1
Q ss_pred ccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCC
Q 043390 46 VFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGG 125 (150)
Q Consensus 46 ~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~ 125 (150)
.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+. +++++|++.++. ++.+|..|.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-----PNVKDHAGWTPLHEACNHGHL-KVVELLLQHKAL-VNTTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCCCHHHHHHHcCCH-HHHHHHHHcCCc-ccCcCCCCC
Confidence 5789999999999999999999999999988 688999999999999999996 999999999865 999999999
Q ss_pred CHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 126 TALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 126 tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
||||+|+..|+.+++++|+++|+.+
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga~~ 102 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGASR 102 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999999998763
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=5.3e-25 Score=140.23 Aligned_cols=126 Identities=17% Similarity=0.120 Sum_probs=104.2
Q ss_pred hhcCHHHHHHHHhhcCHH----HHHHHHHhCCCCCccccccCCCcHHHHHHhhCC------hHHHHHHHhhCCCCccccc
Q 043390 13 NKINSELYNALMIKQDEQ----KVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKK------SDLVMKLLDELPDQSLDKM 82 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~----~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~------~~~v~~ll~~~~~~~~~~~ 82 (150)
....++||.|+. .|+.+ .++.|+..+.+ ++.+|..|+||||+|+..++ .+++++|+..|++ +
T Consensus 36 ~~g~T~Lh~A~~-~~~~~~~~~iv~~Ll~~Gad--vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-----i 107 (186)
T 3t8k_A 36 VLKSNILYDVLR-NNNDEARYKISMFLINKGAD--IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-----I 107 (186)
T ss_dssp HHTTTHHHHHTT-CSCHHHHHHHHHHHHHTTCC--SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCC-----S
T ss_pred cCCCCHHHHHHH-cCCcchHHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCC-----C
Confidence 345667999998 88754 67778887555 77889999999999999887 4789999999998 6
Q ss_pred ccCCCCCC-hHHHHHHHcCCc----HHHHHHHHh-hCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhcc
Q 043390 83 TRQNKAGN-TILHETASSSHA----LPVADKLFR-KAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKN 147 (150)
Q Consensus 83 ~~~~~~g~-t~l~~a~~~g~~----~~~~~~Ll~-~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~ 147 (150)
+.+|..|. ||||+|+..+.. .+++++|++ .|++ ++.+|..|.||||+|++.|+.+++++|.++.
T Consensus 108 n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 108 TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-LLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 88999999 999999985432 258899999 7754 9999999999999999999999999988653
No 88
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.92 E-value=8.7e-25 Score=152.55 Aligned_cols=104 Identities=20% Similarity=0.260 Sum_probs=76.5
Q ss_pred cccccCCCcHHHHHHhhC---ChHHHHHHHhhCCCCccc---ccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccc
Q 043390 45 CVFTIYDDTVLHVAAYTK---KSDLVMKLLDELPDQSLD---KMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLG 118 (150)
Q Consensus 45 ~~~~~~g~~~L~~a~~~~---~~~~v~~ll~~~~~~~~~---~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~ 118 (150)
+..|..|+||||+|+..+ +.+++++|++.|++++.. ..+..|..|.||||+|+..|+. +++++|++.++.+++
T Consensus 229 ~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 229 EELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM-PIVKYLVGEKGSNKD 307 (373)
T ss_dssp SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH-HHHHHHHHHSCCCTT
T ss_pred hhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH-HHHHHHHHhcCCCcc
Confidence 334555555555555554 455556666665553110 0123567899999999999996 999999988756699
Q ss_pred cccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 119 MRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 119 ~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.+|..|.||||+|+..|+.+++++|+++|+.
T Consensus 308 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad 338 (373)
T 2fo1_E 308 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS 338 (373)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999875
No 89
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=7.7e-25 Score=129.16 Aligned_cols=97 Identities=32% Similarity=0.360 Sum_probs=89.7
Q ss_pred ccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCC
Q 043390 46 VFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGG 125 (150)
Q Consensus 46 ~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~ 125 (150)
.+|..|+||||+|+..++.+++++|+..|++ ++.+|..|.||||+|+..|+. +++++|++.++. ++.+|..|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~d~~g~t~L~~A~~~~~~-~~~~~Ll~~g~~-~~~~d~~g~ 76 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-----VNARSKDGNTPLHLAAKNGHA-EIVKLLLAKGAD-VNARSKDGN 76 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-----SSCCCSSSCCTTHHHHTTTCH-HHHHHHTTTTCC-TTCCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCcH-HHHHHHHHcCCC-CcccCCCCC
Confidence 5688999999999999999999999999988 688899999999999999996 999999999865 899999999
Q ss_pred CHHHHHHHcCCHHHHHHHHhccCC
Q 043390 126 TALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 126 tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
|||++|+..|+.+++++|+++|++
T Consensus 77 tpl~~A~~~~~~~~~~~Ll~~ga~ 100 (115)
T 2l6b_A 77 TPEHLAKKNGHHEIVKLLDAKGAD 100 (115)
T ss_dssp CTTHHHHTTTCHHHHHHHHTTSSS
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999986
No 90
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=1.3e-23 Score=137.73 Aligned_cols=123 Identities=20% Similarity=0.156 Sum_probs=105.5
Q ss_pred HHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHH
Q 043390 18 ELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETA 97 (150)
Q Consensus 18 ~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~ 97 (150)
.|+.|+. .|+.+.++.+++.+.+ ++..+..|.||||+|+..|+.+++++|++.+.+. ....+..|.||||+|+
T Consensus 12 ~l~~A~~-~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 12 DIVKATQ-YGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV----DQLGGDLNSTPLHWAT 84 (240)
T ss_dssp CHHHHHH-TTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCBTTTTBCHHHHHH
T ss_pred HHHHHHH-cCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc----hhhcCCcCCChhHHHH
Confidence 4889999 9999999999987544 6778888999999999999999999999998873 2344556899999999
Q ss_pred HcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 98 SSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 98 ~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
..|+. +++++|++.++. ++.++..|.||||+|+..|+.+++++|+++|+.
T Consensus 85 ~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~ 134 (240)
T 3eu9_A 85 RQGHL-SMVVQLMKYGAD-PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD 134 (240)
T ss_dssp HHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HcCCH-HHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC
Confidence 99996 999999998865 888889999999999999999999999988865
No 91
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.91 E-value=2.1e-24 Score=130.90 Aligned_cols=101 Identities=20% Similarity=0.175 Sum_probs=93.8
Q ss_pred CCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccc
Q 043390 42 HSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRN 121 (150)
Q Consensus 42 ~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~ 121 (150)
.+++..+..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+. |+. +++++|++.++. ++.++
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~-~~~-~~v~~Ll~~g~~-~~~~~ 74 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-----PNALNRFGRRPIQVMMM-GSA-QVAELLLLHGAE-PNCAD 74 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCTTTTTSTT-SCH-HHHHHHHHHTCC-SSCCB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-----cCCcCCCCCCHHHHHHc-CCH-HHHHHHHHCCCC-CCCcC
Confidence 34678899999999999999999999999999988 68899999999999999 996 999999999965 99999
Q ss_pred CC-CCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 122 NN-GGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 122 ~~-g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
.. |.||||+|+..|+.+++++|+++|+.+
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99 999999999999999999999998763
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=1.9e-23 Score=143.78 Aligned_cols=127 Identities=18% Similarity=0.157 Sum_probs=102.5
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCC----hHHHHHHHhhCCCCcccccccCCCCCC
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKK----SDLVMKLLDELPDQSLDKMTRQNKAGN 90 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~----~~~v~~ll~~~~~~~~~~~~~~~~~g~ 90 (150)
..++|+.|+. .|+.+.++.|+.+. +.+++..|..|++++|+++..+. ..++++|+++|++ ++.+|..|.
T Consensus 168 g~T~L~~A~~-~g~~~~v~~LL~~~-gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad-----~n~~d~~g~ 240 (337)
T 4g8k_A 168 GATALMDAAE-KGHVEVLKILLDEM-GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-----VNVRGERGK 240 (337)
T ss_dssp SCCHHHHHHH-HTCHHHHHHHHHHS-CCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC-----TTCCCGGGC
T ss_pred CCcHHHHHHH-CCCHHHHHHHHhcc-CCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC-----CCCcCCCCC
Confidence 3457999999 99999999888652 23367788888888888776554 3577888888888 577888888
Q ss_pred hHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 91 TILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 91 t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
||||+|+..|+. +++++|+...+.+++.+|..|+||||+|++.|+.+++++|+++|+.
T Consensus 241 t~L~~a~~~~~~-~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd 298 (337)
T 4g8k_A 241 TPLILAVEKKHL-GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 298 (337)
T ss_dssp CHHHHHHHTTCH-HHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS
T ss_pred CHHHHHHHhhhh-HHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 888888888886 8888888875566888888888888888888888888888888875
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.2e-24 Score=138.51 Aligned_cols=123 Identities=12% Similarity=0.136 Sum_probs=106.0
Q ss_pred HHHHHHHHhhcCHHHHHHHHHhCCCCCccccc-cCCCcHHHHHHhhCCh----HHHHHHHhhCCCCcccccccCCCCCCh
Q 043390 17 SELYNALMIKQDEQKVIELCRKVPDHSLCVFT-IYDDTVLHVAAYTKKS----DLVMKLLDELPDQSLDKMTRQNKAGNT 91 (150)
Q Consensus 17 ~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~-~~g~~~L~~a~~~~~~----~~v~~ll~~~~~~~~~~~~~~~~~g~t 91 (150)
+.++.|+. .|+.+.++.++.... +..+ ..|+||||+|+..++. +++++|++.|++ ++.+|..|+|
T Consensus 8 ~~l~~Aa~-~g~~~~~~~l~~~~~----~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-----vn~~d~~g~T 77 (186)
T 3t8k_A 8 RTVSAAAM-LGTYEDFLELFEKGY----EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-----IKSRTKEGTT 77 (186)
T ss_dssp SSHHHHHH-HSCHHHHHHHHHHSS----SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-----SSCCCTTCCC
T ss_pred cHHHHHHH-cCCHHHHHHHHhcCc----ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-----CCCCCCCCCc
Confidence 45999999 999999999988743 3344 7899999999999975 589999999999 6899999999
Q ss_pred HHHHHHHcCCc-----HHHHHHHHhhCCcccccccCCCC-CHHHHHHHcC-----CHHHHHHHHh-ccCCC
Q 043390 92 ILHETASSSHA-----LPVADKLFRKAPGLLGMRNNNGG-TALLGAAHNG-----KIEIFNFLAG-KNFRL 150 (150)
Q Consensus 92 ~l~~a~~~g~~-----~~~~~~Ll~~~~~~~~~~~~~g~-tpl~~a~~~g-----~~~~~~~L~~-~~~~l 150 (150)
|||+|+..++. .+++++|++.|++ ++.+|..|+ ||||+|+..+ +.+++++|++ +|+.+
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~ 147 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCT
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCC
Confidence 99999998862 2689999999965 999999999 9999999954 4579999999 88864
No 94
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=1.5e-23 Score=137.47 Aligned_cols=129 Identities=19% Similarity=0.176 Sum_probs=86.5
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcc----------------
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSL---------------- 79 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~---------------- 79 (150)
.++++.|+. .|+.+.++.|++.+.+ ++..+..|.||||+|+..++.+++++|++.|.+++.
T Consensus 77 ~t~L~~A~~-~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 77 STPLHWATR-QGHLSMVVQLMKYGAD--PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp BCHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred CChhHHHHH-cCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Confidence 445777777 7777777776666433 455666677777777777777777777776655311
Q ss_pred -------------cccccCCC-CCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHh
Q 043390 80 -------------DKMTRQNK-AGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAG 145 (150)
Q Consensus 80 -------------~~~~~~~~-~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~ 145 (150)
.+++..+. .|.||||+|+..|+. +++++|++.|+. ++.++..|.|||++|++.|+.+++++|++
T Consensus 154 ~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 154 HSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNT-TVISLLLEAGAN-VDAQNIKGESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp CSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCH-HHHHHHHHHTCC-TTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCH-HHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 01344444 677777777777775 777777777754 77777777888888888888888888777
Q ss_pred ccCC
Q 043390 146 KNFR 149 (150)
Q Consensus 146 ~~~~ 149 (150)
.+.+
T Consensus 232 ~~~~ 235 (240)
T 3eu9_A 232 ARQA 235 (240)
T ss_dssp HC--
T ss_pred hhhc
Confidence 6653
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1.3e-23 Score=125.24 Aligned_cols=96 Identities=20% Similarity=0.193 Sum_probs=87.9
Q ss_pred ccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCH
Q 043390 48 TIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTA 127 (150)
Q Consensus 48 ~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tp 127 (150)
+..|.+|||+|+..|+.+++++|++.|.+ ++.+|..|+||||+|+..|+. +++++|++.++. ++.+|..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-----VNRTLEGGRKPLHYAADCGQL-EILEFLLLKGAD-INAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-----TTSCCTTSSCHHHHHHHTTCH-HHHHHHHTTTCC-TTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-----cCccCCCCCcHHHHHHHcCCH-HHHHHHHHcCCC-CCcCCCCCCCH
Confidence 56778999999999999999999999988 688999999999999999996 999999999965 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCC
Q 043390 128 LLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 128 l~~a~~~g~~~~~~~L~~~~~~l 150 (150)
||+|+..|+.+++++|+++|+.+
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADK 99 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999763
No 96
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.90 E-value=3e-23 Score=136.12 Aligned_cols=111 Identities=21% Similarity=0.197 Sum_probs=92.3
Q ss_pred HHHHHhCCCCC-ccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHh
Q 043390 33 IELCRKVPDHS-LCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFR 111 (150)
Q Consensus 33 ~~ll~~~~~~~-~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~ 111 (150)
+.++..+.... .+..+..+.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+. +++++|++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~ 75 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-----PSQPNEEGITALHNAICGANY-SIVDFLIT 75 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-----TTCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-----CCCCCCCCCCHHHHHHHcCCH-HHHHHHHH
Confidence 45666655432 233466678899999999999999999999998 688999999999999999996 99999999
Q ss_pred hCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 112 KAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 112 ~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
.|++ ++.+|..|+||||+|+..|+.+++++|+++|+.+
T Consensus 76 ~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~ 113 (229)
T 2vge_A 76 AGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAI 113 (229)
T ss_dssp TTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT
T ss_pred CCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 9865 9999999999999999999999999999999763
No 97
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.90 E-value=4e-23 Score=125.22 Aligned_cols=97 Identities=22% Similarity=0.179 Sum_probs=89.1
Q ss_pred cccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCC
Q 043390 47 FTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGT 126 (150)
Q Consensus 47 ~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~t 126 (150)
....+.||||+|+..|+.+++++|++.|.+ ++.+|..|.||||+|+..|+. +++++|++.++. ++.+|..|.|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~-~~~~d~~g~t 82 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD-----VNAKDEYGLTPLYLATAHGHL-EIVEVLLKNGAD-VNAVDAIGFT 82 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCTTCCC
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-CCcCCCCCCC
Confidence 356678999999999999999999999988 688999999999999999996 999999999865 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCC
Q 043390 127 ALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 127 pl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+.+++++|+++|+.+
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGADV 106 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999998763
No 98
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.8e-22 Score=119.43 Aligned_cols=94 Identities=30% Similarity=0.405 Sum_probs=88.1
Q ss_pred CCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHH
Q 043390 50 YDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALL 129 (150)
Q Consensus 50 ~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~ 129 (150)
+|+||||+|+..|+.+++++|++.|.+ ++.++..|.||||+|+..++. +++++|++.+.. ++.++..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~-~~~~~Ll~~g~~-~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGHL-EVVKLLLEAGAD-VNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-----CCCcCCCCCcHHHHHHHcCcH-HHHHHHHHcCCC-CcccCCCCCcHHH
Confidence 589999999999999999999999988 678899999999999999996 999999999865 9999999999999
Q ss_pred HHHHcCCHHHHHHHHhccCCC
Q 043390 130 GAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 130 ~a~~~g~~~~~~~L~~~~~~l 150 (150)
+|+..|+.+++++|+++|+.+
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~~~ 94 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGADV 94 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHcChHHHHHHHHHcCCCC
Confidence 999999999999999998753
No 99
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.89 E-value=1e-22 Score=119.25 Aligned_cols=93 Identities=24% Similarity=0.225 Sum_probs=83.7
Q ss_pred ccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCC
Q 043390 44 LCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNN 123 (150)
Q Consensus 44 ~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~ 123 (150)
....+.+|.|+||+|+..|+.+++++|+..|++ ++.+|..|+||||+|+..|+. +++++|++.|+. ++.+|..
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----i~~~d~~g~tpLh~A~~~~~~-~~v~~Ll~~ga~-~~~~d~~ 89 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-----VAAKDKNGSTPLHLAARNGHL-EVVKLLLEAGAD-VXAQDKF 89 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTT
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-ccccccC
Confidence 334588899999999999999999999999988 688999999999999999996 999999999865 9999999
Q ss_pred CCCHHHHHHHcCCHHHHHHH
Q 043390 124 GGTALLGAAHNGKIEIFNFL 143 (150)
Q Consensus 124 g~tpl~~a~~~g~~~~~~~L 143 (150)
|.||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999987
No 100
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.89 E-value=9.8e-22 Score=135.22 Aligned_cols=124 Identities=23% Similarity=0.201 Sum_probs=113.0
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCcccccc-CCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTI-YDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~-~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
.+.|+.|+. .|+.+.|+.|++.+.+ ++.++. .|+||||+|+..|+.+++++|+++|++ ++.++..+.+|++
T Consensus 26 ~t~L~~Av~-~g~~~~V~~LL~~Gad--vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-----~~~~~~~~~~~~~ 97 (337)
T 4g8k_A 26 NHLLIKAVQ-NEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-----PVLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHH-TTCHHHHHHHHHHTCC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHH
T ss_pred ChHHHHHHH-cCCHHHHHHHHHCCCC--CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-----hhhhccCCCchhH
Confidence 456999999 9999999999999765 566654 599999999999999999999999998 5889999999999
Q ss_pred HHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccCC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNFR 149 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~~ 149 (150)
.++..+.. .++..++..+.. ++..|..|.|||++|+..|+.+++++|+++|+.
T Consensus 98 ~~~~~~~~-~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~ 150 (337)
T 4g8k_A 98 LAAIAGSV-KLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 150 (337)
T ss_dssp HHHHHTCH-HHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHhcccc-hhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999996 999999999865 999999999999999999999999999999875
No 101
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=1.2e-22 Score=132.34 Aligned_cols=98 Identities=29% Similarity=0.283 Sum_probs=90.2
Q ss_pred cccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCC
Q 043390 47 FTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGT 126 (150)
Q Consensus 47 ~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~t 126 (150)
.+..|.||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+. +++++|++.++.+++.+|..|+|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~~g~~~~~~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVG-----VNGLDKAGSTALYWACHGGHK-DIVEMLFTQPNIELNQQNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCH-HHHHHHTTSTTCCCCCCCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCC-----ccccCCCCCCHHHHHHHcCCH-HHHHHHHcCCCCCccccCCCCCC
Confidence 356789999999999999999999999988 688999999999999999996 99999999933559999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCC
Q 043390 127 ALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 127 pl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+.+++++|+++|+.+
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~ 166 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGART 166 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999863
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1.7e-22 Score=128.21 Aligned_cols=95 Identities=22% Similarity=0.149 Sum_probs=87.9
Q ss_pred ccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccc-CCCCC
Q 043390 48 TIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRN-NNGGT 126 (150)
Q Consensus 48 ~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~-~~g~t 126 (150)
+..|.||||+|+..|+.++++.|+. +.+ ++.+|..|.||||+|+..|+. +++++|++.|+. ++.++ ..|+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-----~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~-~~~~~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-----VDAVDENGRTALLFVAGLGSD-KCVRLLAEAGAD-LDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-----TTCCCTTSCCHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-----CCCcCCCCCCHHHHHHHcCCH-HHHHHHHHcCCC-CCcCCCCCCCC
Confidence 5678999999999999999999999 777 688999999999999999996 999999999965 88888 88999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCC
Q 043390 127 ALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 127 pl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+.+++++|+++|+.+
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCC
Confidence 999999999999999999998763
No 103
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=1.7e-22 Score=125.09 Aligned_cols=98 Identities=19% Similarity=0.120 Sum_probs=87.6
Q ss_pred cccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCC
Q 043390 45 CVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNG 124 (150)
Q Consensus 45 ~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g 124 (150)
...+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+ .|+. +++++|++.|+. ++.++..|
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~-~~~~-~~v~~Ll~~g~~-~~~~d~~g 77 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGAN-----PNAPNSYGRRPIQVMM-MGSA-RVAELLLLHGAE-PNCADPAT 77 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCC-----TTCCCSSSCCTTTSSC-TTCH-HHHHHHHTTTCC-CCCCCTTT
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHH-cCCH-HHHHHHHHcCCC-CCCcCCCC
Confidence 34578899999999999999999999999988 6889999999999985 8886 999999999865 99999999
Q ss_pred CC-HHHHHHHcCCHHHHHHHHhccCCC
Q 043390 125 GT-ALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 125 ~t-pl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
.| |||+|+..|+.+++++|+++|+.+
T Consensus 78 ~ttpL~~A~~~~~~~~v~~Ll~~ga~~ 104 (156)
T 1bi7_B 78 LTRPVHDAAREGFLDTLVVLHRAGARL 104 (156)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred CcHHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 99 999999999999999999998753
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.87 E-value=2.2e-22 Score=138.26 Aligned_cols=114 Identities=13% Similarity=0.052 Sum_probs=96.7
Q ss_pred hcCHHHHHHHHHhCCCCCccc-cccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCC---
Q 043390 26 KQDEQKVIELCRKVPDHSLCV-FTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSH--- 101 (150)
Q Consensus 26 ~~~~~~~~~ll~~~~~~~~~~-~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~--- 101 (150)
.+..+.++.++.. +.+++. .|..|+||||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+
T Consensus 107 ~~~~~~~~~l~~~--g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-----~n~~d~~g~TpLh~A~~~g~~~~ 179 (327)
T 1sw6_A 107 SLLQEVNDAFPNT--QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-----RLYGDNMGESCLVKAVKSVNNYD 179 (327)
T ss_dssp HHHHHHHHHCTTS--CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTBCCTTCCCHHHHHHHSSHHHH
T ss_pred hhHHHHHHHHHhc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHhccccc
Confidence 3333344444443 344777 799999999999999999999999999998 68899999999999999987
Q ss_pred cHHHHHHHHhhCCcccccccCCCCCHHHHHHH----cCCHHHHHHHHhcc
Q 043390 102 ALPVADKLFRKAPGLLGMRNNNGGTALLGAAH----NGKIEIFNFLAGKN 147 (150)
Q Consensus 102 ~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~----~g~~~~~~~L~~~~ 147 (150)
. ++++.|++.+..+++.+|..|+||||+|+. .|+.+++++|++.+
T Consensus 180 ~-~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~ 228 (327)
T 1sw6_A 180 S-GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 228 (327)
T ss_dssp T-TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred H-HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHH
Confidence 6 778888888756699999999999999999 99999999999874
No 105
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.87 E-value=2.6e-23 Score=145.10 Aligned_cols=127 Identities=17% Similarity=0.184 Sum_probs=102.4
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCC-CccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDH-SLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILH 94 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~-~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~ 94 (150)
.++||.|+. .|+.+.++.|+..+... .....+..|.||||+|+..|+.+++++|+++|++....+++.++ .||||
T Consensus 93 ~T~Lh~Aa~-~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh 168 (376)
T 2aja_A 93 EVICFVAAI-TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFR 168 (376)
T ss_dssp HHHHHHHHH-HCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHH
T ss_pred CCHHHHHHH-cCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHH
Confidence 467999999 99999999999875522 12234567789999999999999999999999752111233333 89999
Q ss_pred HHHHcCCcHHHHHHHHhhCCccccc--ccCCCCCHHHHHH-HcCCHHHHHHHHhccC
Q 043390 95 ETASSSHALPVADKLFRKAPGLLGM--RNNNGGTALLGAA-HNGKIEIFNFLAGKNF 148 (150)
Q Consensus 95 ~a~~~g~~~~~~~~Ll~~~~~~~~~--~~~~g~tpl~~a~-~~g~~~~~~~L~~~~~ 148 (150)
+|+..|+. +++++|++.|+. ++. .|..|.||||+|+ ..|+.+++++|++.|+
T Consensus 169 ~Aa~~G~~-eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 169 LAAENGHL-HVLNRLCELAPT-EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHTTCH-HHHHHHHHSCGG-GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHHCCCH-HHHHHHHHcCCc-cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC
Confidence 99999996 999999999965 666 8888999999999 9999999999998763
No 106
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=3.8e-22 Score=131.93 Aligned_cols=95 Identities=22% Similarity=0.149 Sum_probs=87.8
Q ss_pred ccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHHHHHcCCcHHHHHHHHhhCCccccccc-CCCCC
Q 043390 48 TIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHETASSSHALPVADKLFRKAPGLLGMRN-NNGGT 126 (150)
Q Consensus 48 ~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~-~~g~t 126 (150)
+..|.||||+|+..|+.++++.|+. +.+ ++.+|..|.||||+|+..|+. +++++|++.|+. ++.++ ..|+|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-----~~~~d~~g~t~L~~A~~~g~~-~~v~~Ll~~ga~-~~~~~~~~g~t 113 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRD-----VDAVDENGRTALLFVAGLGSD-KCVRLLAEAGAD-LDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCC-----TTCBCTTSCBHHHHHHHHTCH-HHHHHHHHTTCC-TTCCCSSSCCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCC-----CCCcCCCCCCHHHHHHHCCCH-HHHHHHHHcCCC-CCcCCCCCCCC
Confidence 4578999999999999999999999 777 688999999999999999996 999999999965 88888 78999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCC
Q 043390 127 ALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 127 pl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+.+++++|+++|+.+
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~ 137 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADI 137 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCC
Confidence 999999999999999999999863
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=6.6e-21 Score=108.20 Aligned_cols=90 Identities=26% Similarity=0.228 Sum_probs=82.8
Q ss_pred CHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChHHHH
Q 043390 16 NSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTILHE 95 (150)
Q Consensus 16 ~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~l~~ 95 (150)
.++||.|+. .|+.+.++.|++.+.+ ++.+|..|+||||+|+..++.+++++|++.|++ ++.+|..|+||||+
T Consensus 3 ~t~L~~A~~-~~~~~~v~~Ll~~g~~--~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 3 RTPLHLAAR-NGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHL 74 (93)
T ss_dssp CCHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHH
T ss_pred CcHHHHHHH-cCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHHH
Confidence 456999999 9999999999998655 778899999999999999999999999999998 68899999999999
Q ss_pred HHHcCCcHHHHHHHHhhCC
Q 043390 96 TASSSHALPVADKLFRKAP 114 (150)
Q Consensus 96 a~~~g~~~~~~~~Ll~~~~ 114 (150)
|+..|+. +++++|++.|+
T Consensus 75 A~~~~~~-~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHL-EVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCH-HHHHHHHHTTC
T ss_pred HHHcCCH-HHHHHHHHcCC
Confidence 9999996 99999999884
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=2e-21 Score=114.38 Aligned_cols=106 Identities=25% Similarity=0.244 Sum_probs=93.8
Q ss_pred hhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCChH
Q 043390 13 NKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNTI 92 (150)
Q Consensus 13 ~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t~ 92 (150)
....+.|+.|+. .|+.+.++.|+..+.+ ++..|..|+||||+|+..++.+++++|++.|++ ++.+|..|.||
T Consensus 7 ~~g~t~L~~A~~-~~~~~~~~~Ll~~g~~--~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~d~~g~tp 78 (115)
T 2l6b_A 7 KDGNTPLHNAAK-NGHAEEVKKLLSKGAD--VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-----VNARSKDGNTP 78 (115)
T ss_dssp CSSCCHHHHHHH-HTCHHHHHHHTTTTCC--SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-----TTCCCTTCCCT
T ss_pred CCCCCHHHHHHH-cCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----CcccCCCCCCH
Confidence 445667999999 9999999999988654 778899999999999999999999999999998 68899999999
Q ss_pred HHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHH
Q 043390 93 LHETASSSHALPVADKLFRKAPGLLGMRNNNGGTAL 128 (150)
Q Consensus 93 l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl 128 (150)
||+|+..|+. +++++|++.|++ ++.++..|.+|-
T Consensus 79 l~~A~~~~~~-~~~~~Ll~~ga~-~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHH-EIVKLLDAKGAD-VNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCH-HHHHHHHTTSSS-HHHHSCCCC---
T ss_pred HHHHHHCCCH-HHHHHHHHcCCC-CCcCCccccccc
Confidence 9999999996 999999999965 999999998874
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=2.5e-21 Score=131.64 Aligned_cols=110 Identities=19% Similarity=0.040 Sum_probs=90.8
Q ss_pred hhhcCHHHHHHHHhh---cCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCC
Q 043390 12 KNKINSELYNALMIK---QDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKA 88 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~---~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~ 88 (150)
+....++||.|+. . ++.+.++.|+..+.+ ++.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..
T Consensus 187 ~~~g~t~Lh~A~~-~~~~~~~~iv~~Ll~~gad--vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-----~~~~d~~ 258 (301)
T 2b0o_E 187 QAPEELVLHLAVK-VANQASLPLVDFIIQNGGH--LDAKAADGNTALHYAALYNQPDCLKLLLKGRAL-----VGTVNEA 258 (301)
T ss_dssp CSCEECHHHHHHH-TCCTTTHHHHHHHHHHSSC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----CSCCCTT
T ss_pred CCCCccHHHHHHH-hcccCcHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCC
Confidence 3345567999998 7 889999999998655 778899999999999999999999999999998 6889999
Q ss_pred CChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCH
Q 043390 89 GNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKI 137 (150)
Q Consensus 89 g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~ 137 (150)
|.||||+|+..|+. +++++|++.++. .|.||||+|++.|+.
T Consensus 259 G~TpL~~A~~~~~~-~iv~~Ll~~ga~-------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 259 GETALDIARKKHHK-ECEELLEQAQAG-------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp SCCHHHHHHHHTCH-HHHHHHHHHHHH-------TTSSCCC--------
T ss_pred CCCHHHHHHHcCCH-HHHHHHHHhcCC-------CCCChhHHHHhcCCc
Confidence 99999999999996 999999998843 478999999998874
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=3.4e-22 Score=139.49 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=100.1
Q ss_pred cCHHHHHHHHhhcCHHHHHHHHHhCCCCC-ccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCccccccc--CCCCCCh
Q 043390 15 INSELYNALMIKQDEQKVIELCRKVPDHS-LCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTR--QNKAGNT 91 (150)
Q Consensus 15 ~~~~l~~a~~~~~~~~~~~~ll~~~~~~~-~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~--~~~~g~t 91 (150)
..++|+.|+. .|+.+.++.|+..+++.. .+..+.+ +||||+|+..|+.+++++|+++|++ ++. +|..|.|
T Consensus 128 ~~tpL~~Aa~-~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-----~~~~~~d~~g~T 200 (376)
T 2aja_A 128 NYQAFRLAAE-NGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT-----EATAMIQAENYY 200 (376)
T ss_dssp HHHHHHHHHH-TTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG-----GHHHHHHHHHHH
T ss_pred CCCHHHHHHH-cCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc-----cchhccCCCCCC
Confidence 3458999999 999999999999875421 1223333 8999999999999999999999987 455 7888999
Q ss_pred HHHHHH-HcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHHhccC
Q 043390 92 ILHETA-SSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLAGKNF 148 (150)
Q Consensus 92 ~l~~a~-~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~~~~~ 148 (150)
|||+|+ ..|+. +++++|++.|+ .|.|||++|+..|+.+++++|+++|+
T Consensus 201 pL~~Aa~~~G~~-eiv~~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 201 AFRWAAVGRGHH-NVINFLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp HHHHHHSTTCCH-HHHHHHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHCCCH-HHHHHHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCc
Confidence 999999 99996 99999998652 17899999999999999999999875
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=6e-19 Score=122.79 Aligned_cols=94 Identities=14% Similarity=0.130 Sum_probs=86.4
Q ss_pred CCCcHHHHHHhh-CChHHHHHHHhhCCCCcccccccCC--CCCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCC
Q 043390 50 YDDTVLHVAAYT-KKSDLVMKLLDELPDQSLDKMTRQN--KAGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGT 126 (150)
Q Consensus 50 ~g~~~L~~a~~~-~~~~~v~~ll~~~~~~~~~~~~~~~--~~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~t 126 (150)
.+.++||.|+.. ++.++++.|+..|++ ++..+ ..|.||||+|+..|+. +++++|++.|+. ++.+|..|+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-----vn~~~~~~~g~TpLh~Aa~~g~~-~iv~~LL~~Gad-vn~~d~~G~T 270 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-----VNWVNGGQDNATPLIQATAANSL-LACEFLLQNGAN-VNQADSAGRG 270 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-----TTCCCTTTTCCCHHHHHHHTTCH-HHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-----CCccccccCCCCHHHHHHHCCCH-HHHHHHHHcCCC-CCCCCCCCCC
Confidence 345799999999 999999999999998 56677 8999999999999996 999999999965 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCC
Q 043390 127 ALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 127 pl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
|||+|+..|+.+++++|+++|+.+
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad~ 294 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGADL 294 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCcHHHHHHHHHCcCCC
Confidence 999999999999999999999863
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=2.1e-18 Score=100.79 Aligned_cols=89 Identities=22% Similarity=0.249 Sum_probs=79.4
Q ss_pred hhhcCHHHHHHHHhhcCHHHHHHHHHhCCCCCccccccCCCcHHHHHHhhCChHHHHHHHhhCCCCcccccccCCCCCCh
Q 043390 12 KNKINSELYNALMIKQDEQKVIELCRKVPDHSLCVFTIYDDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQNKAGNT 91 (150)
Q Consensus 12 ~~~~~~~l~~a~~~~~~~~~~~~ll~~~~~~~~~~~~~~g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~g~t 91 (150)
+....+.||.|+. .|+.+.++.|+..+.+ ++.+|..|+||||+|+..++.+++++|+.+|++ ++.+|..|.|
T Consensus 21 ~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~--i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-----~~~~d~~g~t 92 (110)
T 2zgd_A 21 GSDLGKKLLEAAR-AGQDDEVRILMANGAD--VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-----VXAQDKFGKT 92 (110)
T ss_dssp -CCHHHHHHHHHH-HTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCC
T ss_pred CCccchHHHHHHH-cCCHHHHHHHHHcCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccccCCCc
Confidence 3445667999999 9999999999988544 778899999999999999999999999999998 6889999999
Q ss_pred HHHHHHHcCCcHHHHHHH
Q 043390 92 ILHETASSSHALPVADKL 109 (150)
Q Consensus 92 ~l~~a~~~g~~~~~~~~L 109 (150)
|||+|+..|+. +++++|
T Consensus 93 pl~~A~~~~~~-~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNE-DLAEIL 109 (110)
T ss_dssp HHHHHHHHTCH-HHHHHH
T ss_pred HHHHHHHcCCH-HHHHHh
Confidence 99999999996 999876
No 113
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.78 E-value=2.7e-18 Score=123.84 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=84.4
Q ss_pred CCcHHHHHHhhCChHHHHHHHhhCCCCcccccccC------CCCCChHHHHHHH---cCCcHHHHHHHHhhCCccccccc
Q 043390 51 DDTVLHVAAYTKKSDLVMKLLDELPDQSLDKMTRQ------NKAGNTILHETAS---SSHALPVADKLFRKAPGLLGMRN 121 (150)
Q Consensus 51 g~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~------~~~g~t~l~~a~~---~g~~~~~~~~Ll~~~~~~~~~~~ 121 (150)
..+.||.|+..|+.+.++.|+..|++ ++.. +..|.||||+|+. .|+. +++++|++.|++ ++.+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~-----~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~-~~v~~Ll~~ga~-vn~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD-----FGQPLPGPDAQAPEELVLHLAVKVANQASL-PLVDFIIQNGGH-LDAKA 204 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC-----SSSCBCCSSSCCSCBCHHHHHHHTCCTTTH-HHHHHHHHHSCC-TTCCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc-----ccCCCCCcccccccchHHHHHHHhcccccH-HHHHHHHHcCCC-CCccC
Confidence 34679999999999999999999998 4544 8899999999966 8886 999999999965 99999
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccCCC
Q 043390 122 NNGGTALLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 122 ~~g~tpl~~a~~~g~~~~~~~L~~~~~~l 150 (150)
..|+||||+|+..|+.+++++|+++|+.+
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~ 233 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGRALV 233 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTCCCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999864
No 114
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=7.9e-18 Score=113.24 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=85.8
Q ss_pred CcHHHHHHhhCChHHHHHHHhhCCCCcccc-cccCCCCCChHHHHHHHc---CCcHHHHHHHHhhCCcccccccCCCCCH
Q 043390 52 DTVLHVAAYTKKSDLVMKLLDELPDQSLDK-MTRQNKAGNTILHETASS---SHALPVADKLFRKAPGLLGMRNNNGGTA 127 (150)
Q Consensus 52 ~~~L~~a~~~~~~~~v~~ll~~~~~~~~~~-~~~~~~~g~t~l~~a~~~---g~~~~~~~~Ll~~~~~~~~~~~~~g~tp 127 (150)
.++|+.|+..++.+.+..++..|.+.+... ++..+..|.||||+|+.. |+. +++++|++.|++ ++.+|..|.||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~-~~v~~Ll~~ga~-in~~d~~g~Tp 208 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL-HIVDFLVQNSGN-LDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTH-HHHHHHHHHCSC-TTCCCTTCCCH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchH-HHHHHHHHCCCC-ccccCCCCCCH
Confidence 358999999999999999999998853222 455688999999999999 786 999999999965 99999999999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCC
Q 043390 128 LLGAAHNGKIEIFNFLAGKNFRL 150 (150)
Q Consensus 128 l~~a~~~g~~~~~~~L~~~~~~l 150 (150)
||+|+..|+.+++++|+++|+.+
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~gad~ 231 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGKASI 231 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999863
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=64.78 E-value=5.3 Score=17.89 Aligned_cols=24 Identities=25% Similarity=0.263 Sum_probs=16.5
Q ss_pred hhhhcCHHHHHHHHhhcCHHHHHHH
Q 043390 11 AKNKINSELYNALMIKQDEQKVIEL 35 (150)
Q Consensus 11 ~~~~~~~~l~~a~~~~~~~~~~~~l 35 (150)
.-..+++.++.|+. .|+.+.++.|
T Consensus 9 ~I~aiEQqiyvA~s-eGd~etv~~L 32 (40)
T 1gp8_A 9 NKDAIRKQMDAAAS-KGDVETYRKL 32 (40)
T ss_dssp HHHHHHHHHHHHHT-TSCHHHHHHH
T ss_pred HHHHHHHHHHHHHh-cCCHHHHHHH
Confidence 33455666788888 8888877654
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=58.97 E-value=28 Score=24.88 Aligned_cols=49 Identities=18% Similarity=0.129 Sum_probs=37.3
Q ss_pred hcCHHHHHHHHHhCCCCCccc------------cccCCCcHHHHHHhhCChHHHHHHHhhC
Q 043390 26 KQDEQKVIELCRKVPDHSLCV------------FTIYDDTVLHVAAYTKKSDLVMKLLDEL 74 (150)
Q Consensus 26 ~~~~~~~~~ll~~~~~~~~~~------------~~~~g~~~L~~a~~~~~~~~v~~ll~~~ 74 (150)
.|+...|..++..+.+..=.. .-..|.|.+|.|++..+.+++..|+..+
T Consensus 32 e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 32 EGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 688899999998866532111 1235899999999999999999988743
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=40.14 E-value=65 Score=19.92 Aligned_cols=48 Identities=13% Similarity=-0.047 Sum_probs=32.9
Q ss_pred CCChHHHHHHHcCCcHHHHHHHHhhCCcccccccCCCCCHHHHHHHcCCHHHHHHHH
Q 043390 88 AGNTILHETASSSHALPVADKLFRKAPGLLGMRNNNGGTALLGAAHNGKIEIFNFLA 144 (150)
Q Consensus 88 ~g~t~l~~a~~~g~~~~~~~~Ll~~~~~~~~~~~~~g~tpl~~a~~~g~~~~~~~L~ 144 (150)
+-+.+.+.+...|+..++++.|.+.+.. + -+...|..+|..++.+-++
T Consensus 91 ~~n~af~~~l~lGdv~~~i~lL~~~~r~-~--------eA~~~A~t~g~~~~a~~~~ 138 (177)
T 3mkq_B 91 DFGSMLLNTFYNNSTKERSSIFAEGGSL-P--------LAYAVAKANGDEAAASAFL 138 (177)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHTTCH-H--------HHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHcCCHHHHHHHHHHCCCh-H--------HHHHHHHHcCcHHHHHHHH
Confidence 3345667777788877788888776632 2 2456777788888887665
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.86 E-value=2.1e+02 Score=20.65 Aligned_cols=53 Identities=11% Similarity=0.072 Sum_probs=37.5
Q ss_pred HhhCChHHHHHHHhhCCCCccc-------ccccC--CCCCChHHHHHHHcCCcHHHHHHHHhh
Q 043390 59 AYTKKSDLVMKLLDELPDQSLD-------KMTRQ--NKAGNTILHETASSSHALPVADKLFRK 112 (150)
Q Consensus 59 ~~~~~~~~v~~ll~~~~~~~~~-------~~~~~--~~~g~t~l~~a~~~g~~~~~~~~Ll~~ 112 (150)
+..|....|+..+..|.+++.. .+|.. -.-|.|.+|+|+...+- +++..|+..
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~-~~l~~ll~~ 91 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQ-DMLAILLTE 91 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCH-HHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhh-hHHHHhhhc
Confidence 4568888888888888776431 12222 23588999999999884 888888864
Done!