BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043394
(90 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357122594|ref|XP_003563000.1| PREDICTED: putative syntaxin-131-like [Brachypodium distachyon]
Length = 303
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/48 (72%), Positives = 44/48 (91%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
QV +AV+HVQ GT+ALR+AK LQ++SRKCMMIAII+LLVIA IIVL++
Sbjct: 250 QVQNAVNHVQTGTEALRSAKNLQKKSRKCMMIAIIMLLVIAGIIVLSI 297
>gi|357453479|ref|XP_003597017.1| hypothetical protein MTR_2g088710 [Medicago truncatula]
gi|355486065|gb|AES67268.1| hypothetical protein MTR_2g088710 [Medicago truncatula]
Length = 68
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 1 MFNDEALINFRTISWMQVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIII 60
MF++ NF +V +A DHV+ G DAL TAK LQ++SRKCMMIAIIL+L+IAI I
Sbjct: 1 MFDNPKCYNFEKKC--EVANATDHVKSGNDALHTAKSLQKKSRKCMMIAIILVLLIAIFI 58
Query: 61 VLAV 64
VL V
Sbjct: 59 VLGV 62
>gi|359485569|ref|XP_002273906.2| PREDICTED: putative syntaxin-131-like [Vitis vinifera]
Length = 304
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
QVT+AVDHVQ GTDALRTAK LQ++SRKCMM AIIL+L+IA II L+V
Sbjct: 252 QVTNAVDHVQWGTDALRTAKSLQKKSRKCMMFAIILILIIAAIITLSV 299
>gi|168067504|ref|XP_001785655.1| Qa-SNARE, Sso1/Syntaxin1-type, SYP13 group [Physcomitrella patens
subsp. patens]
gi|162662716|gb|EDQ49535.1| Qa-SNARE, Sso1/Syntaxin1-type, SYP13 group [Physcomitrella patens
subsp. patens]
Length = 325
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
QV+ AV+HV GT AL+ AK LQR +RKC +AI LLLV AII++LAV
Sbjct: 268 QVSKAVEHVAAGTSALQKAKTLQRGTRKCTCVAIFLLLVTAIIVLLAV 315
>gi|297739297|emb|CBI28948.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/31 (83%), Positives = 29/31 (93%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMM 47
QVT+AVDHVQ GTDALRTAK LQ++SRKCMM
Sbjct: 348 QVTNAVDHVQWGTDALRTAKSLQKKSRKCMM 378
>gi|449468343|ref|XP_004151881.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
Length = 305
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 29/31 (93%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMM 47
QVT+AVDHV+ GTDAL+TAK LQ+RSRKCMM
Sbjct: 252 QVTNAVDHVRTGTDALQTAKSLQKRSRKCMM 282
>gi|449490276|ref|XP_004158558.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
Length = 305
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 29/31 (93%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMM 47
QVT+AVDHV+ GTDAL+TAK LQ+RSRKCMM
Sbjct: 252 QVTNAVDHVRTGTDALQTAKSLQKRSRKCMM 282
>gi|356547073|ref|XP_003541942.1| PREDICTED: LOW QUALITY PROTEIN: APO protein 4, mitochondrial-like
[Glycine max]
Length = 395
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMM 47
QVT+A DHV+LG DAL+TAK LQ++SRKCMM
Sbjct: 7 QVTNATDHVRLGNDALQTAKSLQKKSRKCMM 37
>gi|34393920|dbj|BAC83655.1| putative syntaxin-related protein(knolle) [Oryza sativa Japonica
Group]
Length = 198
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMM 47
QV +AVDH+Q GT LRTAKRLQ++SRKCM
Sbjct: 145 QVQNAVDHIQRGTGELRTAKRLQKKSRKCMF 175
>gi|125558601|gb|EAZ04137.1| hypothetical protein OsI_26280 [Oryza sativa Indica Group]
Length = 318
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDH+Q GT LRTAKRLQ++SRKCM
Sbjct: 265 QVQNAVDHIQRGTGELRTAKRLQKKSRKCM 294
>gi|125600507|gb|EAZ40083.1| hypothetical protein OsJ_24527 [Oryza sativa Japonica Group]
Length = 318
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDH+Q GT LRTAKRLQ++SRKCM
Sbjct: 265 QVQNAVDHIQRGTGELRTAKRLQKKSRKCM 294
>gi|297607355|ref|NP_001059838.2| Os07g0528900 [Oryza sativa Japonica Group]
gi|255677835|dbj|BAF21752.2| Os07g0528900 [Oryza sativa Japonica Group]
Length = 303
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDH+Q GT LRTAKRLQ++SRKCM
Sbjct: 240 QVQNAVDHIQRGTGELRTAKRLQKKSRKCM 269
>gi|242045856|ref|XP_002460799.1| hypothetical protein SORBIDRAFT_02g035120 [Sorghum bicolor]
gi|241924176|gb|EER97320.1| hypothetical protein SORBIDRAFT_02g035120 [Sorghum bicolor]
Length = 265
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMM 47
QV +AV+HV GT+ALR AK Q++SRKCMM
Sbjct: 210 QVQNAVNHVVTGTEALREAKNYQKKSRKCMM 240
>gi|351723559|ref|NP_001237539.1| uncharacterized protein LOC100527540 [Glycine max]
gi|255632572|gb|ACU16636.1| unknown [Glycine max]
Length = 105
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
QV+ AVDHVQ G +AL+ AK+LQR SRK M IA
Sbjct: 48 QVSSAVDHVQQGNNALQKAKKLQRNSRKWMCIA 80
>gi|414886945|tpg|DAA62959.1| TPA: hypothetical protein ZEAMMB73_231902 [Zea mays]
Length = 241
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 25/29 (86%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V +AV+HV GT+ALRTAK LQ++SRKCM
Sbjct: 189 VQNAVNHVVSGTEALRTAKSLQKKSRKCM 217
>gi|388519397|gb|AFK47760.1| unknown [Medicago truncatula]
Length = 305
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
QV+ AVDHVQ G ++L+ AK++QR SRK M IA
Sbjct: 248 QVSSAVDHVQQGNNSLQKAKKMQRNSRKWMCIA 280
>gi|302818172|ref|XP_002990760.1| hypothetical protein SELMODRAFT_132199 [Selaginella moellendorffii]
gi|300141498|gb|EFJ08209.1| hypothetical protein SELMODRAFT_132199 [Selaginella moellendorffii]
Length = 240
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
QV+ AVDHVQ GT AL K+LQR +RKCM +
Sbjct: 188 QVSKAVDHVQTGTAALEKVKKLQRGTRKCMCVG 220
>gi|302809922|ref|XP_002986653.1| hypothetical protein SELMODRAFT_124666 [Selaginella moellendorffii]
gi|300145541|gb|EFJ12216.1| hypothetical protein SELMODRAFT_124666 [Selaginella moellendorffii]
Length = 240
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
QV+ AVDHVQ GT AL K+LQR +RKCM +
Sbjct: 188 QVSKAVDHVQTGTAALEKVKKLQRGTRKCMCVG 220
>gi|359806652|ref|NP_001241535.1| uncharacterized protein LOC100807404 [Glycine max]
gi|255642273|gb|ACU21401.1| unknown [Glycine max]
Length = 306
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDHVQ GT AL+ AK+LQ+ SRK M
Sbjct: 252 QVNNAVDHVQRGTSALQNAKKLQKNSRKWM 281
>gi|356543730|ref|XP_003540313.1| PREDICTED: putative syntaxin-131-like [Glycine max]
Length = 306
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDHVQ GT AL+ AK+LQ+ SRK M
Sbjct: 252 QVNNAVDHVQRGTSALQNAKKLQKNSRKWM 281
>gi|357453477|ref|XP_003597016.1| Syntaxin-132 [Medicago truncatula]
gi|355486064|gb|AES67267.1| Syntaxin-132 [Medicago truncatula]
Length = 307
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDHVQ GT AL++AK+LQ+ SRK M
Sbjct: 253 QVNNAVDHVQRGTTALQSAKKLQKNSRKWM 282
>gi|217072938|gb|ACJ84829.1| unknown [Medicago truncatula]
Length = 307
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDHVQ GT AL++AK+LQ+ SRK M
Sbjct: 253 QVNNAVDHVQRGTTALQSAKKLQKNSRKWM 282
>gi|449489595|ref|XP_004158359.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
Length = 307
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
VT AVDHVQ G AL+ AK+LQ+ SRK M IA
Sbjct: 250 HVTSAVDHVQQGNTALQKAKKLQKNSRKWMCIA 282
>gi|224164118|ref|XP_002338643.1| predicted protein [Populus trichocarpa]
gi|222873069|gb|EEF10200.1| predicted protein [Populus trichocarpa]
Length = 72
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 26 QLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIV 61
Q GT A +TAK+LQ+ SRK M IAII+LL++ IIV
Sbjct: 36 QSGTTAFQTAKKLQKNSRKWMCIAIIILLLVVAIIV 71
>gi|255577735|ref|XP_002529743.1| syntaxin, putative [Ricinus communis]
gi|223530784|gb|EEF32650.1| syntaxin, putative [Ricinus communis]
Length = 308
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AV+HVQ GT AL+ AK+LQR SRK M
Sbjct: 251 QVANAVNHVQTGTTALQNAKKLQRNSRKWM 280
>gi|388506704|gb|AFK41418.1| unknown [Lotus japonicus]
Length = 310
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV +AVDHVQ GT AL+ AK+LQ+ SRK M
Sbjct: 253 QVNNAVDHVQRGTSALQNAKKLQKNSRKWM 282
>gi|449446742|ref|XP_004141130.1| PREDICTED: putative syntaxin-131-like [Cucumis sativus]
Length = 308
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
VT AVDHVQ G AL+ AK+LQ+ SRK M IA
Sbjct: 251 HVTSAVDHVQQGNTALQKAKKLQKNSRKWMCIA 283
>gi|384245589|gb|EIE19082.1| s-syntaxin-like protein [Coccomyxa subellipsoidea C-169]
Length = 277
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
QV A +HVQ G L AK+LQ+++RK M ++ +L+I I IVLAV
Sbjct: 215 QVGKARNHVQQGVTQLVEAKKLQKKTRKLMCCVLVTVLLIIIAIVLAV 262
>gi|168041751|ref|XP_001773354.1| Qa-SNARE, Sso1/Syntaxin1-type, SYP13 group [Physcomitrella patens
subsp. patens]
gi|162675396|gb|EDQ61892.1| Qa-SNARE, Sso1/Syntaxin1-type, SYP13 group [Physcomitrella patens
subsp. patens]
Length = 311
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
QV AVDH+ GT AL+ AK LQR +RKCM I
Sbjct: 256 QVGKAVDHIASGTTALQKAKSLQRGTRKCMCIG 288
>gi|356502301|ref|XP_003519958.1| PREDICTED: syntaxin-132-like [Glycine max]
Length = 107
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHV G +AL+ AK+LQR SRK M
Sbjct: 53 QVSSAVDHVHQGNNALQKAKKLQRNSRKWM 82
>gi|255569518|ref|XP_002525726.1| syntaxin, putative [Ricinus communis]
gi|223535026|gb|EEF36709.1| syntaxin, putative [Ricinus communis]
Length = 304
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK+LQR SRK M
Sbjct: 247 QVSSAVDHVQSGNTALQKAKKLQRNSRKWM 276
>gi|224146010|ref|XP_002325846.1| predicted protein [Populus trichocarpa]
gi|222862721|gb|EEF00228.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV++AVDHVQ G AL+ AK+LQR SRK M
Sbjct: 247 QVSNAVDHVQSGNVALQKAKKLQRNSRKWM 276
>gi|147863015|emb|CAN82987.1| hypothetical protein VITISV_030563 [Vitis vinifera]
Length = 204
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK+LQR SRK M
Sbjct: 148 QVSSAVDHVQSGNTALQRAKKLQRSSRKWM 177
>gi|294460399|gb|ADE75779.1| unknown [Picea sitchensis]
Length = 308
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV++AVDHVQ GT AL+ AK LQR SRK M
Sbjct: 252 QVSNAVDHVQSGTVALQKAKTLQRNSRKWM 281
>gi|294462524|gb|ADE76808.1| unknown [Picea sitchensis]
Length = 308
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV++AVDHVQ GT AL+ AK LQR SRK M
Sbjct: 252 QVSNAVDHVQSGTVALQKAKTLQRNSRKWM 281
>gi|225439283|ref|XP_002266162.1| PREDICTED: putative syntaxin-131 [Vitis vinifera]
gi|296089302|emb|CBI39074.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK+LQR SRK M
Sbjct: 251 QVSSAVDHVQSGNTALQRAKKLQRSSRKWM 280
>gi|302810930|ref|XP_002987155.1| hypothetical protein SELMODRAFT_426042 [Selaginella moellendorffii]
gi|300145052|gb|EFJ11731.1| hypothetical protein SELMODRAFT_426042 [Selaginella moellendorffii]
Length = 303
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 5 EALINFRTISWMQVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
E L N T QV+ AVDHVQ GT AL+ K+LQR RK M
Sbjct: 237 EMLDNIET----QVSKAVDHVQAGTSALKRTKQLQRSKRKWM 274
>gi|302788983|ref|XP_002976260.1| hypothetical protein SELMODRAFT_443146 [Selaginella moellendorffii]
gi|300155890|gb|EFJ22520.1| hypothetical protein SELMODRAFT_443146 [Selaginella moellendorffii]
Length = 303
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 5 EALINFRTISWMQVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
E L N T QV+ AVDHVQ GT AL+ K+LQR RK M
Sbjct: 237 EMLDNIET----QVSKAVDHVQAGTSALKRTKQLQRSKRKWM 274
>gi|297813967|ref|XP_002874867.1| SYP123 [Arabidopsis lyrata subsp. lyrata]
gi|297320704|gb|EFH51126.1| SYP123 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
V+ A V GTD L AK LQR SRK IAIIL +V+ I+I+ +
Sbjct: 251 VSKASSFVMRGTDQLHGAKVLQRNSRKWTCIAIILAIVLVIVILFPI 297
>gi|8346545|emb|CAB93709.1| syntaxin-like protein [Arabidopsis thaliana]
Length = 307
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK LQ+ SRK M
Sbjct: 251 QVSSAVDHVQSGNTALQRAKSLQKNSRKWM 280
>gi|334187506|ref|NP_001190256.1| syntaxin-132 [Arabidopsis thaliana]
gi|332003861|gb|AED91244.1| syntaxin-132 [Arabidopsis thaliana]
Length = 315
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK LQ+ SRK M
Sbjct: 259 QVSSAVDHVQSGNTALQRAKSLQKNSRKWM 288
>gi|159470987|ref|XP_001693638.1| Qa-SNARE Sso1/Syntaxin1, PM-type [Chlamydomonas reinhardtii]
gi|158283141|gb|EDP08892.1| Qa-SNARE Sso1/Syntaxin1, PM-type [Chlamydomonas reinhardtii]
Length = 311
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILL 53
QV +VD+V+ GT+AL+ AK+LQ+ +RK M AI+++
Sbjct: 256 QVARSVDYVKGGTEALQDAKQLQKNTRKWMCCAIMIM 292
>gi|18415701|ref|NP_568187.1| syntaxin-132 [Arabidopsis thaliana]
gi|28380129|sp|Q8VZU2.1|SY132_ARATH RecName: Full=Syntaxin-132; Short=AtSYP132
gi|17380724|gb|AAL36192.1| putative syntaxin [Arabidopsis thaliana]
gi|21436145|gb|AAM51319.1| putative syntaxin [Arabidopsis thaliana]
gi|332003859|gb|AED91242.1| syntaxin-132 [Arabidopsis thaliana]
Length = 304
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK LQ+ SRK M
Sbjct: 248 QVSSAVDHVQSGNTALQRAKSLQKNSRKWM 277
>gi|302834515|ref|XP_002948820.1| Qa-SNARE, Sso1/Syntaxin1-type [Volvox carteri f. nagariensis]
gi|300266011|gb|EFJ50200.1| Qa-SNARE, Sso1/Syntaxin1-type [Volvox carteri f. nagariensis]
Length = 334
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILL 53
QV +VD+V+ GT+AL+ AK+LQ+ +RK M AI+++
Sbjct: 278 QVARSVDYVKGGTEALQDAKQLQKNTRKWMCCAIMIM 314
>gi|297806847|ref|XP_002871307.1| SYP132 [Arabidopsis lyrata subsp. lyrata]
gi|297317144|gb|EFH47566.1| SYP132 [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
QV+ AVDHVQ G AL+ AK LQ+ SRK M
Sbjct: 248 QVSSAVDHVQSGNTALQRAKSLQKNSRKWM 277
>gi|290981674|ref|XP_002673555.1| predicted protein [Naegleria gruberi]
gi|284087139|gb|EFC40811.1| predicted protein [Naegleria gruberi]
Length = 325
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 22 VDHVQLGTDALRTAKRLQRRSRKCM--MIAIILLLVIAIIIVLAVAI 66
V++V+ G ++TA+++Q+ SRKC+ +IA++++ + + I+LAV +
Sbjct: 269 VEYVEKGIKDIKTARKVQKTSRKCLYIIIAVVVIFTVIVAILLAVGV 315
>gi|255084103|ref|XP_002508626.1| predicted protein [Micromonas sp. RCC299]
gi|226523903|gb|ACO69884.1| predicted protein [Micromonas sp. RCC299]
Length = 329
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
QV+ +VD+V G +L A++ Q+ SRK M ++I +L+IA I+L V
Sbjct: 273 QVSKSVDYVHRGQVSLIQARKYQKSSRKWMCCSLICVLMIACAILLPV 320
>gi|194705500|gb|ACF86834.1| unknown [Zea mays]
Length = 75
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQR SRK M
Sbjct: 21 VSNATNHIQQGVSALQNAKKLQRNSRKWM 49
>gi|383847265|ref|XP_003699275.1| PREDICTED: syntaxin-1A-like [Megachile rotundata]
Length = 294
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIV 61
V HAVD+VQ T + A + Q ++R+ M+ II +L++A+I++
Sbjct: 241 VEHAVDYVQTATQDTKKALKYQSKARRKMIFIIICVLILAVILI 284
>gi|226506668|ref|NP_001149376.1| syntaxin 132 [Zea mays]
gi|195626752|gb|ACG35206.1| syntaxin 132 [Zea mays]
gi|414592020|tpg|DAA42591.1| TPA: syntaxin 132 [Zea mays]
Length = 304
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQR SRK M
Sbjct: 250 VSNATNHIQQGVSALQNAKKLQRNSRKWM 278
>gi|413954512|gb|AFW87161.1| hypothetical protein ZEAMMB73_770023 [Zea mays]
Length = 309
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVAI 66
V HA V+ GT L +A+ Q+ SRK M IAI+ +V+ ++VL V I
Sbjct: 250 HVAHASSFVRRGTVELESAREYQKSSRKWMCIAILASIVLIAVLVLPVLI 299
>gi|225447260|ref|XP_002272992.1| PREDICTED: syntaxin-124 [Vitis vinifera]
gi|297739275|emb|CBI28926.3| unnamed protein product [Vitis vinifera]
Length = 305
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAV 64
V HA V+ GTD L+ A+ Q+ SRK IA+ L + + I+I+ V
Sbjct: 249 HVAHASSFVRKGTDQLQIARNYQKSSRKWTCIAVGLAICLIIVILFPV 296
>gi|356537204|ref|XP_003537119.1| PREDICTED: syntaxin-121-like [Glycine max]
Length = 332
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVL 62
V A V+ G + L+TA++ Q+ +RK IILLLVI +VL
Sbjct: 255 HVARAHSFVRTGAEQLQTARKYQKNTRKWTCYCIILLLVIIFFVVL 300
>gi|12833165|dbj|BAB22416.1| unnamed protein product [Mus musculus]
Length = 261
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIV 61
V A DHVQ L A QR+SRK + I II +LV+ I+I+
Sbjct: 210 VESAEDHVQQANQQLSRAADYQRKSRKTLCI-IIFILVVGIVII 252
>gi|310800153|gb|EFQ35046.1| SNARE domain-containing protein [Glomerella graminicola M1.001]
Length = 323
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 20 HAVDHVQLGTDALRTAKRLQRRSRK----CMMIAIILLLVIAIIIVLAVAIERADTEAVV 75
V+++Q G + + TA + RR RK C+++ +++++ IA+ + L + + R E
Sbjct: 262 QTVENIQKGNEEVATANKHARRRRKLKWWCLLVVVLIIIAIALGVGLGITLTRNANEKAT 321
Query: 76 G 76
G
Sbjct: 322 G 322
>gi|293335785|ref|NP_001170292.1| uncharacterized protein LOC100384255 [Zea mays]
gi|224034867|gb|ACN36509.1| unknown [Zea mays]
gi|414878234|tpg|DAA55365.1| TPA: hypothetical protein ZEAMMB73_260528 [Zea mays]
Length = 307
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Query: 5 EALINFRTISWMQVTHAVDHVQLGTDALRTAKRLQRRSRK 44
E L N T QVT A +H+Q GT+ L+ AK+LQ+ +RK
Sbjct: 245 EMLDNIET----QVTGAAEHIQTGTNLLQKAKKLQKNTRK 280
>gi|340720485|ref|XP_003398667.1| PREDICTED: syntaxin-1A-like isoform 1 [Bombus terrestris]
Length = 293
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVAI 66
V HAVD+VQ T + A + Q ++R+ MI I++ ++I+++I++A+ I
Sbjct: 241 VEHAVDYVQTATQDTKKALKYQSKARR-KMIFIVICVLISVVILIAIII 288
>gi|33146794|dbj|BAC79742.1| putative syntaxin-related protein [Oryza sativa Japonica Group]
gi|50510098|dbj|BAD30769.1| putative syntaxin-related protein [Oryza sativa Japonica Group]
gi|215706936|dbj|BAG93396.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708811|dbj|BAG94080.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199139|gb|EEC81566.1| hypothetical protein OsI_25009 [Oryza sativa Indica Group]
gi|222636486|gb|EEE66618.1| hypothetical protein OsJ_23199 [Oryza sativa Japonica Group]
Length = 303
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQ+ SRK M
Sbjct: 249 VSNATNHIQQGVSALQNAKKLQKNSRKWM 277
>gi|358060121|dbj|GAA94180.1| hypothetical protein E5Q_00828 [Mixia osmundae IAM 14324]
Length = 416
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 21 AVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVL 62
AVD V+ + L+TA QRRS KC +I +++LL++ +IVL
Sbjct: 362 AVD-VKASVEELQTAMSYQRRSGKCRIIFLLVLLIVGAVIVL 402
>gi|395858121|ref|XP_003801422.1| PREDICTED: syntaxin-3 [Otolemur garnettii]
Length = 289
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 16 MQVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAI----ILLLVIAIIIVLAVAI 66
+ V H VDHV+ D + A + Q ++RK +I I +LL ++A+II L+V +
Sbjct: 234 LNVMHTVDHVEKARDETKKAVKYQSQARKKFIIIIVAVGVLLGILALIIGLSVGL 288
>gi|260797201|ref|XP_002593592.1| hypothetical protein BRAFLDRAFT_59863 [Branchiostoma floridae]
gi|229278818|gb|EEN49603.1| hypothetical protein BRAFLDRAFT_59863 [Branchiostoma floridae]
Length = 253
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVL 62
V A HV+ G LR A Q++SR+ M I +I+LL++ ++ L
Sbjct: 201 VESAAIHVESGNQQLRQASDYQKKSRRKMCILLIVLLIVGAVVAL 245
>gi|414883642|tpg|DAA59656.1| TPA: syntaxin 132 [Zea mays]
Length = 367
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQ+ SRK M
Sbjct: 315 VSNATNHIQQGVSALQNAKKLQKNSRKWM 343
>gi|194207823|ref|XP_001917705.1| PREDICTED: syntaxin-12-like [Equus caballus]
Length = 274
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 24 HVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVAI 66
HV+ TD L+ A Q++SRK + I +++L VI +I+VL + +
Sbjct: 229 HVERATDQLQQAAYYQKKSRKKICILVLVLSVIIVILVLTLCL 271
>gi|226501236|ref|NP_001152009.1| syntaxin 132 [Zea mays]
gi|195651821|gb|ACG45378.1| syntaxin 132 [Zea mays]
Length = 304
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQ+ SRK M
Sbjct: 250 VSNATNHIQQGVSALQNAKKLQKNSRKWM 278
>gi|297606777|ref|NP_001058959.2| Os07g0164300 [Oryza sativa Japonica Group]
gi|255677537|dbj|BAF20873.2| Os07g0164300, partial [Oryza sativa Japonica Group]
Length = 336
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQ+ SRK M
Sbjct: 282 VSNATNHIQQGVSALQNAKKLQKNSRKWM 310
>gi|392890032|ref|NP_495044.2| Protein NEP-5 [Caenorhabditis elegans]
gi|358246666|emb|CCD69291.2| Protein NEP-5 [Caenorhabditis elegans]
Length = 655
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 22 VDHVQLGT-DALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVA 65
V HV++G D + ++LQ R C ++A+I LVI ++++ A+
Sbjct: 36 VSHVEIGVPDPIEELQKLQNRPEPCTVLAVITTLVILVLLIFALG 80
>gi|242047518|ref|XP_002461505.1| hypothetical protein SORBIDRAFT_02g003700 [Sorghum bicolor]
gi|241924882|gb|EER98026.1| hypothetical protein SORBIDRAFT_02g003700 [Sorghum bicolor]
Length = 303
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL++AK+LQ+ SRK M
Sbjct: 250 VSNATNHIQQGVTALQSAKKLQKNSRKWM 278
>gi|357111509|ref|XP_003557555.1| PREDICTED: putative syntaxin-131-like [Brachypodium distachyon]
Length = 302
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQ+ SRK M
Sbjct: 250 VSNATNHIQQGVGALQNAKKLQKNSRKWM 278
>gi|110555559|gb|ABG75752.1| putative syntaxin-related protein [Triticum aestivum]
gi|253559525|gb|ACT32452.1| putative SNAP receptor protein [Triticum aestivum]
gi|402484929|gb|AFQ60148.1| SYP132 [Triticum aestivum]
Length = 302
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCM 46
V++A +H+Q G AL+ AK+LQ+ SRK M
Sbjct: 250 VSNATNHIQQGVGALQNAKKLQKNSRKWM 278
>gi|345487373|ref|XP_001604855.2| PREDICTED: syntaxin-1A-like [Nasonia vitripennis]
Length = 297
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVA 65
V HAVD+VQ T + A + Q ++R+ M++ +I L ++ ++I+ +A
Sbjct: 241 VEHAVDYVQTATQDTKKALKYQSKARRKMILIMICLAILLVVIICILA 288
>gi|357124009|ref|XP_003563699.1| PREDICTED: syntaxin-124-like [Brachypodium distachyon]
Length = 307
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVAI 66
V HA V+ GT L TA +Q+ SRK M A++ + I I++V V I
Sbjct: 250 HVAHASSFVRRGTVELETAHEIQKDSRKWMCFAVLGGIAIVIVLVTPVLI 299
>gi|281207556|gb|EFA81739.1| t-SNARE family protein [Polysphondylium pallidum PN500]
Length = 341
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLA 63
V V +V+ G D L A +L RRSRK M I ++ ++VI +I VLA
Sbjct: 287 VESTVMNVKAGVDNLAEANKLHRRSRKKMYI-LLCIVVIVLIAVLA 331
>gi|321456935|gb|EFX68032.1| syntaxin [Daphnia pulex]
Length = 294
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 18 VTHAVDHVQLGTDALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVAI 66
V HAVD+VQ T + A + Q ++R+ I II+ + + ++IVLA+ I
Sbjct: 242 VEHAVDYVQTATQDTKKALKYQSKARR-KKIFIIICVSVTLVIVLAIII 289
>gi|403157952|ref|XP_003307310.2| hypothetical protein PGTG_00260 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163616|gb|EFP74304.2| hypothetical protein PGTG_00260 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 407
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 26 QLGTD------ALRTAKRLQRRSRKCMMIAIILLLVIAIIIVLAVAIERAD---TEAVVG 76
Q+ TD L+TA + Q+RS KC +I +++LLV A +++L +D V G
Sbjct: 305 QMSTDIRGAAQELKTATQHQKRSGKCRVIFLLVLLVFAAVLILVYKPRHSDPNQDNPVSG 364
Query: 77 PGAL 80
G L
Sbjct: 365 SGTL 368
>gi|225429832|ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [Vitis vinifera]
Length = 311
Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 17 QVTHAVDHVQLGTDALRTAKRLQRRSRKCMMIA 49
V +A +V+ GT L+TAK QR SRKCM +
Sbjct: 257 HVMNAAQYVKDGTKNLKTAKDYQRSSRKCMCLG 289
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.137 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,117,139,407
Number of Sequences: 23463169
Number of extensions: 28883666
Number of successful extensions: 142831
Number of sequences better than 100.0: 271
Number of HSP's better than 100.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 142516
Number of HSP's gapped (non-prelim): 290
length of query: 90
length of database: 8,064,228,071
effective HSP length: 60
effective length of query: 30
effective length of database: 6,656,437,931
effective search space: 199693137930
effective search space used: 199693137930
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)