Query 043399
Match_columns 438
No_of_seqs 220 out of 1597
Neff 4.4
Searched_HMMs 46136
Date Fri Mar 29 04:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043399.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043399hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 4.5E-90 9.7E-95 688.9 21.6 274 58-335 20-324 (324)
2 cd00693 secretory_peroxidase H 100.0 6.1E-85 1.3E-89 646.6 21.3 272 62-334 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.5E-61 3.3E-66 463.5 8.7 214 79-306 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 7.5E-57 1.6E-61 444.3 17.1 231 76-339 14-264 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.1E-53 2.4E-58 415.2 15.7 225 74-321 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 8.8E-52 1.9E-56 401.5 16.0 221 66-320 4-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 3.2E-50 6.9E-55 390.8 16.1 211 76-320 17-248 (251)
8 cd00692 ligninase Ligninase an 100.0 4E-49 8.6E-54 395.4 17.9 245 76-341 17-293 (328)
9 cd00314 plant_peroxidase_like 100.0 4.5E-48 9.7E-53 372.7 15.1 228 78-316 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 1.4E-41 3E-46 347.5 14.0 249 63-325 29-401 (409)
11 cd08201 plant_peroxidase_like_ 100.0 5.4E-41 1.2E-45 327.6 5.9 162 86-264 34-213 (264)
12 TIGR00198 cat_per_HPI catalase 100.0 1.5E-39 3.2E-44 350.6 14.3 245 62-321 38-404 (716)
13 PRK15061 catalase/hydroperoxid 100.0 3.3E-36 7.2E-41 323.6 14.4 246 61-321 39-410 (726)
14 cd08200 catalase_peroxidase_2 100.0 7.6E-29 1.6E-33 245.5 14.7 228 81-318 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 99.9 1.3E-24 2.7E-29 235.4 14.1 227 78-318 429-709 (716)
16 PRK15061 catalase/hydroperoxid 99.9 4.9E-24 1.1E-28 230.1 14.2 226 81-318 442-721 (726)
17 COG0376 KatG Catalase (peroxid 99.8 1.2E-18 2.6E-23 182.5 13.2 230 78-317 71-415 (730)
18 COG0376 KatG Catalase (peroxid 97.3 0.00072 1.6E-08 72.9 8.3 165 81-263 452-652 (730)
19 PTZ00411 transaldolase-like pr 27.4 47 0.001 34.7 2.6 79 135-220 148-231 (333)
20 PF12113 SVM_signal: SVM prote 23.4 56 0.0012 23.5 1.6 17 403-419 6-23 (33)
21 KOG0400 40S ribosomal protein 21.8 49 0.0011 30.8 1.3 35 202-236 30-65 (151)
22 PRK12346 transaldolase A; Prov 20.0 74 0.0016 33.1 2.4 81 135-222 137-222 (316)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=4.5e-90 Score=688.90 Aligned_cols=274 Identities=33% Similarity=0.555 Sum_probs=252.3
Q ss_pred CCCCCCCcCcccCCCccHHHHHHHHHHHHHHhCCCCcchhHHhhhhcccccCCCceEeccCCCCCcccccCCCCCCCchh
Q 043399 58 EPYDSLQYDFNRDSCPQAEGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSIEGCDSSVLLDEADGVDSEKMSLPSESLNRF 137 (438)
Q Consensus 58 ~~~~~L~~~fY~~sCP~ae~iVr~~V~~~~~~dp~~Ap~lLRL~FHDCfV~GCDgSILLd~t~~~~sE~~a~~N~gLrgf 137 (438)
..+++|+++||++|||++|+||+++|++++++||+++|++|||+||||||+||||||||+++ ..|+++++|.+|+||
T Consensus 20 ~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf 96 (324)
T PLN03030 20 VQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGY 96 (324)
T ss_pred chhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchH
Confidence 44467999999999999999999999999999999999999999999999999999999965 379999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCC
Q 043399 138 YVINIIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGF 217 (438)
Q Consensus 138 ~vId~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGL 217 (438)
++|+.||++||++||++||||||||+||||||+++|||.|+|++||||+++|.+.++. +||+|+.++++|++.|++|||
T Consensus 97 ~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl 175 (324)
T PLN03030 97 DVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGL 175 (324)
T ss_pred HHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999887775 899999999999999999999
Q ss_pred Cccccccccccceeecccccccccccccc-C---CCCCCCChhHHHHhcccccCCCCC--CceecCCCccccc-------
Q 043399 218 DLRETVTFLDAHGIGVIHCIFFKSHLCNL-G---RINESLDPGFLNLLRSKCRNVHSG--SAVLCSSTNHLFN------- 284 (438)
Q Consensus 218 s~~DlVALSGAHTIG~ahC~~F~~RLynf-~---~~DPtld~~ya~~L~~~Cp~~~~~--~~~lD~~tp~~Fd------- 284 (438)
+.+|||+||||||||++||.+|.+||||| + .+||+||+.|++.|++.||..+++ .+.+|+.||..||
T Consensus 176 ~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nl 255 (324)
T PLN03030 176 NTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNL 255 (324)
T ss_pred CHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHH
Confidence 99999999999999999999999999998 2 369999999999999999963332 2347888887776
Q ss_pred -----ccccHHHHhhhhH-HHHH-hhccCC-----------hHHHHHhhhCCCCCCCCCceeccCcchh
Q 043399 285 -----VFNLTEALKAVVV-IAII-YYALGS-----------QPQQIYMGQNGVPAGDQGRKRKTEPTLR 335 (438)
Q Consensus 285 -----lL~SDqaL~~d~~-~~iV-~yA~~~-----------a~AMvKMgnIgVlTG~~GEIRrnC~~~~ 335 (438)
+|+|||+|+.+++ .++| .||.++ ++||+|||+|+||||++||||++|+++|
T Consensus 256 l~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 256 KNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 5899999998865 5688 898642 5699999999999999999999999987
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=6.1e-85 Score=646.61 Aligned_cols=272 Identities=40% Similarity=0.606 Sum_probs=253.1
Q ss_pred CCCcCcccCCCccHHHHHHHHHHHHHHhCCCCcchhHHhhhhcccccCCCceEeccCCCCCcccccCCCCCCCchhHHHH
Q 043399 62 SLQYDFNRDSCPQAEGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSIEGCDSSVLLDEADGVDSEKMSLPSESLNRFYVIN 141 (438)
Q Consensus 62 ~L~~~fY~~sCP~ae~iVr~~V~~~~~~dp~~Ap~lLRL~FHDCfV~GCDgSILLd~t~~~~sE~~a~~N~gLrgf~vId 141 (438)
||+++||+++||++|+||+++|++.+.+|++++|++|||+||||||+||||||||+++.++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 59999999999999999999999999999999999999999999999999999999887778999999999999999999
Q ss_pred HHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCccc
Q 043399 142 IIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRE 221 (438)
Q Consensus 142 ~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~D 221 (438)
+||+++|+.||++||||||||||||+||+++|||.|+|++||+|+.++.+.++ ++||+|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998887776 79999999999999999999999999
Q ss_pred cccccccceeecccccccccccccc---CCCCCCCChhHHHHhcccccCCCCC--CceecCCCccccc------------
Q 043399 222 TVTFLDAHGIGVIHCIFFKSHLCNL---GRINESLDPGFLNLLRSKCRNVHSG--SAVLCSSTNHLFN------------ 284 (438)
Q Consensus 222 lVALSGAHTIG~ahC~~F~~RLynf---~~~DPtld~~ya~~L~~~Cp~~~~~--~~~lD~~tp~~Fd------------ 284 (438)
|||||||||||++||.+|.+||||| +.+||+||+.|+..|+..||..+++ .+.+|..||..||
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~g 239 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRG 239 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhccc
Confidence 9999999999999999999999998 3589999999999999999975432 2347877776665
Q ss_pred ccccHHHHhhhhH-HHHH-hhccCC-------hHHHHHhhhCCCCCCCCCceeccCcch
Q 043399 285 VFNLTEALKAVVV-IAII-YYALGS-------QPQQIYMGQNGVPAGDQGRKRKTEPTL 334 (438)
Q Consensus 285 lL~SDqaL~~d~~-~~iV-~yA~~~-------a~AMvKMgnIgVlTG~~GEIRrnC~~~ 334 (438)
+|+|||+|+.|++ ..+| .||.++ +.||+|||+|+||||.+||||++|+++
T Consensus 240 lL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 240 LLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred CccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 5899999998875 5688 999874 579999999999999999999999864
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.5e-61 Score=463.52 Aligned_cols=214 Identities=38% Similarity=0.603 Sum_probs=188.7
Q ss_pred HHHHHHHHHHhCCCCcchhHHhhhhcccc-cCCCceEeccCCCCCcccccCCCCCCCc-hhHHHHHHHHHHHhhCCCCCc
Q 043399 79 IRAMVWYLRKSRSGVAPAFLRLVFRDCSI-EGCDSSVLLDEADGVDSEKMSLPSESLN-RFYVINIIKEDLEEICPGVVS 156 (438)
Q Consensus 79 Vr~~V~~~~~~dp~~Ap~lLRL~FHDCfV-~GCDgSILLd~t~~~~sE~~a~~N~gLr-gf~vId~iKa~lE~~CPg~VS 156 (438)
||++|++++.++++++|++|||+|||||+ +|||||||+. ..|+++++|.||+ |+++|++||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 9999999983 5899999999997 999999999999999999999
Q ss_pred hhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCccccccccccceeecccc
Q 043399 157 YSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLDAHGIGVIHC 236 (438)
Q Consensus 157 cADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALSGAHTIG~ahC 236 (438)
|||||++|||+||+.+|||.|+|++||+|+.++++.++ .+||.|+.++++|++.|+++|||++||||||||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999999877 78999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCChhHHHHhcccccCCCCCCceecCCCccccc------------ccccHHHHhhhhH-HHHH-h
Q 043399 237 IFFKSHLCNLGRINESLDPGFLNLLRSKCRNVHSGSAVLCSSTNHLFN------------VFNLTEALKAVVV-IAII-Y 302 (438)
Q Consensus 237 ~~F~~RLynf~~~DPtld~~ya~~L~~~Cp~~~~~~~~lD~~tp~~Fd------------lL~SDqaL~~d~~-~~iV-~ 302 (438)
.+|. ||| + .+||+||+.|+.. .|+..++..+.+| ||..|| +|+|||+|+.+++ .++| .
T Consensus 155 ~~f~-rl~-~-~~dp~~d~~~~~~---~C~~~~~~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~~ 226 (230)
T PF00141_consen 155 SSFS-RLY-F-PPDPTMDPGYAGQ---NCNSGGDNGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVER 226 (230)
T ss_dssp GCTG-GTS-C-SSGTTSTHHHHHH---SSSTSGCTCEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHHH
T ss_pred cccc-ccc-c-cccccccccccee---ccCCCcccccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHHH
Confidence 9999 999 4 8899999999988 8933222322356 444443 5899999998875 6688 8
Q ss_pred hccC
Q 043399 303 YALG 306 (438)
Q Consensus 303 yA~~ 306 (438)
||.|
T Consensus 227 yA~d 230 (230)
T PF00141_consen 227 YAQD 230 (230)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 9853
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=7.5e-57 Score=444.33 Aligned_cols=231 Identities=19% Similarity=0.202 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHhCCCCcchhHHhhhhccc-------ccCCCceEeccCCCCCcccccCCCCCCC-chhHHHHHHHHHH
Q 043399 76 EGRIRAMVWYLRKSRSGVAPAFLRLVFRDCS-------IEGCDSSVLLDEADGVDSEKMSLPSESL-NRFYVINIIKEDL 147 (438)
Q Consensus 76 e~iVr~~V~~~~~~dp~~Ap~lLRL~FHDCf-------V~GCDgSILLd~t~~~~sE~~a~~N~gL-rgf~vId~iKa~l 147 (438)
.+.++++|++ +.++|.++|.+|||+||||| ++||||||+++ .|+++++|.|| +||++|++||+++
T Consensus 14 ~~~~~~~~~~-~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~ 86 (289)
T PLN02608 14 IEKARRDLRA-LIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH 86 (289)
T ss_pred HHHHHHHHHH-HHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc
Confidence 3567777754 66789999999999999999 99999999984 69999999999 6999999999987
Q ss_pred HhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCccccccccc
Q 043399 148 EEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLD 227 (438)
Q Consensus 148 E~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALSG 227 (438)
++|||||||+||||+||+++|||.|+|++||+|++++++ +++||+|+.+++++++.|+++||+++|||||||
T Consensus 87 -----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsG 158 (289)
T PLN02608 87 -----PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSG 158 (289)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcc
Confidence 589999999999999999999999999999999998863 468999999999999999999999999999999
Q ss_pred cceeeccccccccccc-cccC-CCCC-CCChhHHHHhcccccCCCCCCceecCCCcccccccccHHHHhhhhH-HHHH-h
Q 043399 228 AHGIGVIHCIFFKSHL-CNLG-RINE-SLDPGFLNLLRSKCRNVHSGSAVLCSSTNHLFNVFNLTEALKAVVV-IAII-Y 302 (438)
Q Consensus 228 AHTIG~ahC~~F~~RL-ynf~-~~DP-tld~~ya~~L~~~Cp~~~~~~~~lD~~tp~~FdlL~SDqaL~~d~~-~~iV-~ 302 (438)
|||||++||. |+ |+.+ ...| +||+.|+..|...=+. + .-+|+|||+|..+++ ..+| .
T Consensus 159 AHTiG~ahc~----r~g~~g~~~~Tp~~FDN~Yy~~ll~~~~~-g-------------ll~L~SD~~L~~d~~T~~~V~~ 220 (289)
T PLN02608 159 GHTLGRAHPE----RSGFDGPWTKEPLKFDNSYFVELLKGESE-G-------------LLKLPTDKALLEDPEFRPYVEL 220 (289)
T ss_pred cccccccccc----CCCCCCCCCCCCCccChHHHHHHHcCCcC-C-------------ccccccCHhhhcChhHHHHHHH
Confidence 9999999995 55 3211 1234 6999999999754100 0 013689999998876 5588 8
Q ss_pred hccCC-------hHHHHHhhhCCCCCCCCCceeccCcchhhhHH
Q 043399 303 YALGS-------QPQQIYMGQNGVPAGDQGRKRKTEPTLRELQQ 339 (438)
Q Consensus 303 yA~~~-------a~AMvKMgnIgVlTG~~GEIRrnC~~~~~~~~ 339 (438)
||.++ +.||+|||+|+|+||++||+.+..++-.-|.|
T Consensus 221 fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~~~~~~~~ 264 (289)
T PLN02608 221 YAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTSTSTVLAQ 264 (289)
T ss_pred HhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCcchhhhhh
Confidence 99765 57999999999999999999999888766655
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.1e-53 Score=415.20 Aligned_cols=225 Identities=21% Similarity=0.223 Sum_probs=190.3
Q ss_pred cHHHHHHHHHHHHHHhCCCCcchhHHhhhhcccccCCCceEeccCC---CCCcccccCCCCCCC-chhHHHHHHHHHHHh
Q 043399 74 QAEGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSIEGCDSSVLLDEA---DGVDSEKMSLPSESL-NRFYVINIIKEDLEE 149 (438)
Q Consensus 74 ~ae~iVr~~V~~~~~~dp~~Ap~lLRL~FHDCfV~GCDgSILLd~t---~~~~sE~~a~~N~gL-rgf~vId~iKa~lE~ 149 (438)
..++||+++|++++. +++++|++|||+||||| +||+|++++++ ..+.+|+++++|.+| +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~--~~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSG--TYDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHh--ccccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 456899999999999 99999999999999999 48888877533 234579999999999 8999999999986
Q ss_pred hCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCccccccccccc
Q 043399 150 ICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLDAH 229 (438)
Q Consensus 150 ~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALSGAH 229 (438)
| +|||||||++|||+||+.+|||.|+|++||+|+.++....++++||.|+.+++++++.|+++||+++|||||||||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 8999999999999999999999999999999999998777788999999999999999999999999999999999
Q ss_pred eeeccccccccccccccCC---CCC-CCChhHHHHhcccccCCCCCCceecCCCcccccccccHHHHhhhhH-HHHH-hh
Q 043399 230 GIGVIHCIFFKSHLCNLGR---INE-SLDPGFLNLLRSKCRNVHSGSAVLCSSTNHLFNVFNLTEALKAVVV-IAII-YY 303 (438)
Q Consensus 230 TIG~ahC~~F~~RLynf~~---~DP-tld~~ya~~L~~~Cp~~~~~~~~lD~~tp~~FdlL~SDqaL~~d~~-~~iV-~y 303 (438)
|||++||..+ ++++ ..| .+|+.|++.|...=... .++. -.+|+|||+|..+++ ..+| .|
T Consensus 163 TiG~a~c~~~-----~~~g~~~~tp~~FDn~Yy~~ll~~~g~~---------~~~~-~~~L~sD~~L~~d~~t~~~v~~~ 227 (253)
T cd00691 163 TLGRCHKERS-----GYDGPWTKNPLKFDNSYFKELLEEDWKL---------PTPG-LLMLPTDKALLEDPKFRPYVELY 227 (253)
T ss_pred eeecccccCC-----CCCCCCCCCCCcccHHHHHHHhcCCCcc---------CcCc-ceechhhHHHHcCccHHHHHHHH
Confidence 9999999652 3311 234 69999999998652210 0000 036899999998875 5688 89
Q ss_pred ccCC-------hHHHHHhhhCCCCC
Q 043399 304 ALGS-------QPQQIYMGQNGVPA 321 (438)
Q Consensus 304 A~~~-------a~AMvKMgnIgVlT 321 (438)
|.++ +.||+|||+|+|..
T Consensus 228 a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 228 AKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred hhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 8764 57999999999974
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=8.8e-52 Score=401.53 Aligned_cols=221 Identities=22% Similarity=0.333 Sum_probs=187.4
Q ss_pred Cccc--CCCccHHHHHHHHHHHHHHhCCCCcchhHHhhhh-----ccccc--CCCceEeccCCCCCcccccCCCCCCC-c
Q 043399 66 DFNR--DSCPQAEGRIRAMVWYLRKSRSGVAPAFLRLVFR-----DCSIE--GCDSSVLLDEADGVDSEKMSLPSESL-N 135 (438)
Q Consensus 66 ~fY~--~sCP~ae~iVr~~V~~~~~~dp~~Ap~lLRL~FH-----DCfV~--GCDgSILLd~t~~~~sE~~a~~N~gL-r 135 (438)
+||. +-|+++++.+++.+++.+ .+++++|.+|||+|| ||+++ ||||||.. .+|+++++|.|| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 4554 347899999999999988 788999999999999 88876 99999943 479999999999 8
Q ss_pred hhHHHHHHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHH-
Q 043399 136 RFYVINIIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFAS- 214 (438)
Q Consensus 136 gf~vId~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~- 214 (438)
||++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++++ +++||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 689999999999999999999999999999999998865 46899999999999999997
Q ss_pred cCCCccccccccccceeecccccccccccccc-C--CCCC-CCChhHHHHhcccccCCCCCCceecCCCcccccccccHH
Q 043399 215 RGFDLRETVTFLDAHGIGVIHCIFFKSHLCNL-G--RINE-SLDPGFLNLLRSKCRNVHSGSAVLCSSTNHLFNVFNLTE 290 (438)
Q Consensus 215 kGLs~~DlVALSGAHTIG~ahC~~F~~RLynf-~--~~DP-tld~~ya~~L~~~Cp~~~~~~~~lD~~tp~~FdlL~SDq 290 (438)
+|||++||||||||||||++|| .|+ ++ + ...| +||+.|+..|...=+. + . -.|+|||
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g~~~~tp~~fDn~Yy~~ll~~~~~-g------------l-l~l~sD~ 209 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHK----DRS-GFEGAWTSNPLIFDNSYFKELLSGEKE-G------------L-LQLVSDK 209 (250)
T ss_pred cCCCHHHheeeecceeeccccC----CCC-CCCCCCCCCCCccchHHHHHHhcCCcC-C------------C-ccccchH
Confidence 5999999999999999999999 343 33 1 1334 6999999999854110 0 0 1346999
Q ss_pred HHhhhhH-HHHH-hhccCC-------hHHHHHhhhCCCC
Q 043399 291 ALKAVVV-IAII-YYALGS-------QPQQIYMGQNGVP 320 (438)
Q Consensus 291 aL~~d~~-~~iV-~yA~~~-------a~AMvKMgnIgVl 320 (438)
+|..|++ ..+| .||.++ +.||+|||+|++-
T Consensus 210 ~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 210 ALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9998876 5588 899764 5799999999863
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=3.2e-50 Score=390.84 Aligned_cols=211 Identities=21% Similarity=0.295 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHhCCCCcchhHHhhhhcccc-------cCCCceEeccCCCCCcccccCCCCCCCc-hhHHHHHHHHHH
Q 043399 76 EGRIRAMVWYLRKSRSGVAPAFLRLVFRDCSI-------EGCDSSVLLDEADGVDSEKMSLPSESLN-RFYVINIIKEDL 147 (438)
Q Consensus 76 e~iVr~~V~~~~~~dp~~Ap~lLRL~FHDCfV-------~GCDgSILLd~t~~~~sE~~a~~N~gLr-gf~vId~iKa~l 147 (438)
.+-+++.+.+.+ ++...+|.+|||+||||.+ +||||||.+ ..|+++++|.||+ ++++|++||+++
T Consensus 17 ~~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf------~~E~~~~~N~gL~~~~~~i~~iK~~~ 89 (251)
T PLN02879 17 VQRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRH------PQELAHDANNGLDIAVRLLDPIKELF 89 (251)
T ss_pred HHHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecC------hhhccCCCcCChHHHHHHHHHHHHHc
Confidence 345677788776 4569999999999999974 899999976 3699999999997 999999999998
Q ss_pred HhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCccccccccc
Q 043399 148 EEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLD 227 (438)
Q Consensus 148 E~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALSG 227 (438)
++|||||||+||||+||+.+|||.|+|++||+|+..+++ +++||.|+.++++|++.|+++||+++|||||||
T Consensus 90 -----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsG 161 (251)
T PLN02879 90 -----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSG 161 (251)
T ss_pred -----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeec
Confidence 689999999999999999999999999999999998754 478999999999999999999999999999999
Q ss_pred cceeecccccccccccccc-CC--CCC-CCChhHHHHhcccccCCCCCCceecCCCcccccccccHHHHhhhhH-HHHH-
Q 043399 228 AHGIGVIHCIFFKSHLCNL-GR--INE-SLDPGFLNLLRSKCRNVHSGSAVLCSSTNHLFNVFNLTEALKAVVV-IAII- 301 (438)
Q Consensus 228 AHTIG~ahC~~F~~RLynf-~~--~DP-tld~~ya~~L~~~Cp~~~~~~~~lD~~tp~~FdlL~SDqaL~~d~~-~~iV- 301 (438)
|||||++||. | +++ +. ..| +||+.|++.|...=+. + .-+|+|||+|..|++ ..+|
T Consensus 162 aHTiG~ah~~----r-~g~~g~~d~tp~~FDN~Yy~~ll~~~~~-g-------------ll~L~SD~aL~~D~~t~~~V~ 222 (251)
T PLN02879 162 GHTLGRCHKE----R-SGFEGAWTPNPLIFDNSYFKEILSGEKE-G-------------LLQLPTDKALLDDPLFLPFVE 222 (251)
T ss_pred cccccccccc----c-ccCCCCCCCCccceeHHHHHHHHcCCcC-C-------------CccchhhHHHhcCCcHHHHHH
Confidence 9999999995 3 344 22 234 6999999999764100 0 013689999999986 5588
Q ss_pred hhccCC-------hHHHHHhhhCCCC
Q 043399 302 YYALGS-------QPQQIYMGQNGVP 320 (438)
Q Consensus 302 ~yA~~~-------a~AMvKMgnIgVl 320 (438)
.||.++ +.||+|||+||+-
T Consensus 223 ~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 223 KYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred HHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 899875 5799999999975
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=4e-49 Score=395.35 Aligned_cols=245 Identities=17% Similarity=0.134 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHhCC---CCcchhHHhhhhcccc------------cCCCceEeccCCCCCcccccCCCCCCCchhHHH
Q 043399 76 EGRIRAMVWYLRKSRS---GVAPAFLRLVFRDCSI------------EGCDSSVLLDEADGVDSEKMSLPSESLNRFYVI 140 (438)
Q Consensus 76 e~iVr~~V~~~~~~dp---~~Ap~lLRL~FHDCfV------------~GCDgSILLd~t~~~~sE~~a~~N~gLrgf~vI 140 (438)
+..|++++++.+..+. ..|+.+|||+||||++ +|||||||++.+ .|+++++|.||+ ++|
T Consensus 17 ~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~vv 90 (328)
T cd00692 17 WFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EIV 90 (328)
T ss_pred hHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HHH
Confidence 5689999999998554 4677799999999997 899999999853 699999999997 999
Q ss_pred HHHHHHHHhhCCCCCchhhHHHhhhhccccc-cCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCc
Q 043399 141 NIIKEDLEEICPGVVSYSDTLALAAREGVVL-AGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDL 219 (438)
Q Consensus 141 d~iKa~lE~~CPg~VScADIlalAArdAV~~-~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~ 219 (438)
+.+|..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++|||+
T Consensus 91 d~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf~~ 164 (328)
T cd00692 91 EALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGFSP 164 (328)
T ss_pred HHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCH
Confidence 99999999998 99999999999999994 69999999999999998864 4689999999999999999999999
Q ss_pred cccccccccceeeccccccccccccc--cCCCCC-CCChhHHHHhc-c-c-ccCCCCC-CceecCCCcccccccccHHHH
Q 043399 220 RETVTFLDAHGIGVIHCIFFKSHLCN--LGRINE-SLDPGFLNLLR-S-K-CRNVHSG-SAVLCSSTNHLFNVFNLTEAL 292 (438)
Q Consensus 220 ~DlVALSGAHTIG~ahC~~F~~RLyn--f~~~DP-tld~~ya~~L~-~-~-Cp~~~~~-~~~lD~~tp~~FdlL~SDqaL 292 (438)
+||||||||||||++|.. ...+.+ +. ..| .||+.|+.+|. + . -|..++. ..+.++. +.. -+|+||++|
T Consensus 165 ~E~VaLsGAHTiG~a~~~--Dps~~g~p~D-~TP~~FDn~Yf~~ll~~~~~~~g~~~~~~e~~~~~-~g~-~~L~SD~~L 239 (328)
T cd00692 165 DELVALLAAHSVAAQDFV--DPSIAGTPFD-STPGVFDTQFFIETLLKGTAFPGSGGNQGEVESPL-PGE-FRLQSDFLL 239 (328)
T ss_pred HHHhhhcccccccccCCC--CCCCCCCCCC-CCcchhcHHHHHHHHHcCCCCCCccccccccccCc-ccc-ccccchHHH
Confidence 999999999999999942 111111 11 124 69999998854 2 2 2322111 1111211 111 368999999
Q ss_pred hhhhH-HHHH-hhccCC-------hHHHHHhhhCCCCCCCCCceeccCcchhhhHHHH
Q 043399 293 KAVVV-IAII-YYALGS-------QPQQIYMGQNGVPAGDQGRKRKTEPTLRELQQQL 341 (438)
Q Consensus 293 ~~d~~-~~iV-~yA~~~-------a~AMvKMgnIgVlTG~~GEIRrnC~~~~~~~~~~ 341 (438)
..|++ ..+| .||.++ ++||+||++|||. +..+.+|+.++...+-+
T Consensus 240 ~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v~p~~~~~ 293 (328)
T cd00692 240 ARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDVIPPPKPL 293 (328)
T ss_pred hcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCcccCCCCCCC
Confidence 99876 4577 899775 5799999999987 44788999998765433
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=4.5e-48 Score=372.69 Aligned_cols=228 Identities=22% Similarity=0.216 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHhCCCCcchhHHhhhhccccc--------CCCceEeccCCCCCcccccCCCCCCC-chhHHHHHHHHHHH
Q 043399 78 RIRAMVWYLRKSRSGVAPAFLRLVFRDCSIE--------GCDSSVLLDEADGVDSEKMSLPSESL-NRFYVINIIKEDLE 148 (438)
Q Consensus 78 iVr~~V~~~~~~dp~~Ap~lLRL~FHDCfV~--------GCDgSILLd~t~~~~sE~~a~~N~gL-rgf~vId~iKa~lE 148 (438)
.|++.|++.+.+++.++|++|||+||||++. ||||||+++ .|+++++|.+| +++++|+.||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5888999999999999999999999999996 999999997 39999999996 89999999999999
Q ss_pred hhCCCCCchhhHHHhhhhcccccc--CCCceeecCCCcCCCCcc--ccccccCCCCCCCChhHHHHHHHHcCCCcccccc
Q 043399 149 EICPGVVSYSDTLALAAREGVVLA--GGPFYPLHTGRRDSRLAL--ADIATFELPLPNADLPETLASFASRGFDLRETVT 224 (438)
Q Consensus 149 ~~CPg~VScADIlalAArdAV~~~--GGP~~~v~~GRrD~~~s~--~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVA 224 (438)
. |++|||||||++||++||+.+ |||.|++++||+|+..++ ...+.+++|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3334567899999999999999999999999999
Q ss_pred cc-cccee-eccccccccccccccCCCCC-CCChhHHHHhccc-ccCCCCCCceecCCCcccccccccHHHHhhhhH-HH
Q 043399 225 FL-DAHGI-GVIHCIFFKSHLCNLGRINE-SLDPGFLNLLRSK-CRNVHSGSAVLCSSTNHLFNVFNLTEALKAVVV-IA 299 (438)
Q Consensus 225 LS-GAHTI-G~ahC~~F~~RLynf~~~DP-tld~~ya~~L~~~-Cp~~~~~~~~lD~~tp~~FdlL~SDqaL~~d~~-~~ 299 (438)
|+ ||||| |++||..|..|+.......| ++|+.|++.|... |+..... .+...+..--+|+||++|..+++ ..
T Consensus 154 L~~GaHti~G~~~~~~~~~~~~~~~~~tp~~fDN~yy~~l~~~~~~~~~~~---~~~~~~~~~~~l~sD~~L~~d~~t~~ 230 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEGSGLWTSTPFTFDNAYFKNLLDMNWEWRVGS---PDPDGVKGPGLLPSDYALLSDSETRA 230 (255)
T ss_pred hccCCeeccCcccCCCCCcccCCCCCCCCCccchHHHHHHhcCCcccccCC---ccCCCcccCCCchhhHHHhcCHhHHH
Confidence 99 99999 99999999988633212233 7999999888753 4322111 13333333347899999998865 56
Q ss_pred HH-hhccCC-------hHHHHHhhh
Q 043399 300 II-YYALGS-------QPQQIYMGQ 316 (438)
Q Consensus 300 iV-~yA~~~-------a~AMvKMgn 316 (438)
+| .||.++ ++||+||++
T Consensus 231 ~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 231 LVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 78 899764 579999985
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=1.4e-41 Score=347.48 Aligned_cols=249 Identities=16% Similarity=0.126 Sum_probs=200.0
Q ss_pred CCcCc-ccCCCccH-HHHHHHHHHHHHHhC--------CCCcchhHHhhhhcccc-------cCCC-ceEeccCCCCCcc
Q 043399 63 LQYDF-NRDSCPQA-EGRIRAMVWYLRKSR--------SGVAPAFLRLVFRDCSI-------EGCD-SSVLLDEADGVDS 124 (438)
Q Consensus 63 L~~~f-Y~~sCP~a-e~iVr~~V~~~~~~d--------p~~Ap~lLRL~FHDCfV-------~GCD-gSILLd~t~~~~s 124 (438)
+..+| |.+..-.. .+.|++.|++++.+. ...+|.+|||+|||+.+ +|++ |+|.+ ..
T Consensus 29 ~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf------~p 102 (409)
T cd00649 29 MGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRF------AP 102 (409)
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCcccc------cc
Confidence 44444 44444322 268999999999764 37999999999999996 7897 78866 47
Q ss_pred cccCCCCCCC-chhHHHHHHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCcccc-----------
Q 043399 125 EKMSLPSESL-NRFYVINIIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALAD----------- 192 (438)
Q Consensus 125 E~~a~~N~gL-rgf~vId~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~----------- 192 (438)
|++++.|.|| ++..++++||+++ |..||+||+|+||+..||+.+|||.|++.+||.|...+...
T Consensus 103 e~~~~~N~gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~ 178 (409)
T cd00649 103 LNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLA 178 (409)
T ss_pred ccCcHhhhhHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhccc
Confidence 9999999999 5899999999986 45799999999999999999999999999999999754320
Q ss_pred ------------------------cccc--CCCCCCCChhHHHHHHHHcCCCccccccc-cccceeeccccccccccccc
Q 043399 193 ------------------------IATF--ELPLPNADLPETLASFASRGFDLRETVTF-LDAHGIGVIHCIFFKSHLCN 245 (438)
Q Consensus 193 ------------------------~a~~--~LP~p~~~v~~Ll~~F~~kGLs~~DlVAL-SGAHTIG~ahC~~F~~RLyn 245 (438)
.+++ .||+|..++++|++.|++||||++||||| |||||||++||.+|.+||.
T Consensus 179 ~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg- 257 (409)
T cd00649 179 DKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG- 257 (409)
T ss_pred ccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC-
Confidence 1223 69999999999999999999999999999 5999999999999999983
Q ss_pred cCCCCCCCChhHHHHhc--ccccCCCCC-C--ceec---CCCcc-----cc-----------------------------
Q 043399 246 LGRINESLDPGFLNLLR--SKCRNVHSG-S--AVLC---SSTNH-----LF----------------------------- 283 (438)
Q Consensus 246 f~~~DPtld~~ya~~L~--~~Cp~~~~~-~--~~lD---~~tp~-----~F----------------------------- 283 (438)
+||.+++.|+..|+ .+||...+. + ..+| +.+|. ||
T Consensus 258 ---~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~ 334 (409)
T cd00649 258 ---PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGEN 334 (409)
T ss_pred ---CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccc
Confidence 69999999999995 899964322 1 1244 12322 22
Q ss_pred --------------cccccHHHHhhhhH-HHHH-hhccCC-------hHHHHHh--hhCCCCCCCCC
Q 043399 284 --------------NVFNLTEALKAVVV-IAII-YYALGS-------QPQQIYM--GQNGVPAGDQG 325 (438)
Q Consensus 284 --------------dlL~SDqaL~~d~~-~~iV-~yA~~~-------a~AMvKM--gnIgVlTG~~G 325 (438)
-||+||++|+.|+. +++| .||.++ ++||+|| +.+||++--.|
T Consensus 335 ~~~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 335 TVPDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cCCCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 14688999999986 5588 999875 6799999 79999985433
No 11
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=5.4e-41 Score=327.61 Aligned_cols=162 Identities=25% Similarity=0.334 Sum_probs=136.8
Q ss_pred HHHhCCCCcchhHHhhhhccc-------ccCCCceEeccCCCCCccccc-CCCCCCCchhHHHHHHHHHHHhhCCCCCch
Q 043399 86 LRKSRSGVAPAFLRLVFRDCS-------IEGCDSSVLLDEADGVDSEKM-SLPSESLNRFYVINIIKEDLEEICPGVVSY 157 (438)
Q Consensus 86 ~~~~dp~~Ap~lLRL~FHDCf-------V~GCDgSILLd~t~~~~sE~~-a~~N~gLrgf~vId~iKa~lE~~CPg~VSc 157 (438)
....++++||++|||+||||| ++||||||+++.+ .+|+. ...|.+|++|++|+.+ +|||
T Consensus 34 ~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l~~~~~i~~~----------~VSc 100 (264)
T cd08201 34 APGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTLNFFVNFYSP----------RSSM 100 (264)
T ss_pred CcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhccccceeeccC----------ccCH
Confidence 334788999999999999999 8999999999743 47877 5557778889887543 6999
Q ss_pred hhHHHhhhhccccccCCCceeecCCCcCCCCccccccccCCCCCCCChhHHHHHHHHcCCCccccccccc-cceeecccc
Q 043399 158 SDTLALAAREGVVLAGGPFYPLHTGRRDSRLALADIATFELPLPNADLPETLASFASRGFDLRETVTFLD-AHGIGVIHC 236 (438)
Q Consensus 158 ADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALSG-AHTIG~ahC 236 (438)
|||||||||+||+.+|||.|+|++||+|++.+.+. .||.|+.++++|++.|++|||+++|||+||| |||||++||
T Consensus 101 ADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc 176 (264)
T cd08201 101 ADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVHS 176 (264)
T ss_pred HHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeeccc
Confidence 99999999999999999999999999999988764 3999999999999999999999999999995 999999999
Q ss_pred ccccccccc---------cCCCCCCCChhHHHHhccc
Q 043399 237 IFFKSHLCN---------LGRINESLDPGFLNLLRSK 264 (438)
Q Consensus 237 ~~F~~RLyn---------f~~~DPtld~~ya~~L~~~ 264 (438)
..|.++.-. |......||+.|+.++.+.
T Consensus 177 ~~f~~~~~~g~~~~~~~p~dstp~~FDn~~f~E~l~g 213 (264)
T cd08201 177 EDFPEIVPPGSVPDTVLQFFDTTIQFDNKVVTEYLSG 213 (264)
T ss_pred ccchhhcCCccccCCCCCCCCCccccchHHHHHHhcC
Confidence 998544321 1111126999999888744
No 12
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.5e-39 Score=350.55 Aligned_cols=245 Identities=16% Similarity=0.116 Sum_probs=195.3
Q ss_pred CCCcCc-ccCCCccH-HHHHHHHHHHHHHhC--------CCCcchhHHhhhhcccc-------cCC-CceEeccCCCCCc
Q 043399 62 SLQYDF-NRDSCPQA-EGRIRAMVWYLRKSR--------SGVAPAFLRLVFRDCSI-------EGC-DSSVLLDEADGVD 123 (438)
Q Consensus 62 ~L~~~f-Y~~sCP~a-e~iVr~~V~~~~~~d--------p~~Ap~lLRL~FHDCfV-------~GC-DgSILLd~t~~~~ 123 (438)
.+..+| |.+.+-.. .+.|++.|++++.+. ...+|.+|||+||++.+ ||| .|+|.+ .
T Consensus 38 p~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf------~ 111 (716)
T TIGR00198 38 PMGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRF------A 111 (716)
T ss_pred CCCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceec------c
Confidence 344555 44444322 257999999999764 36999999999999996 788 488866 4
Q ss_pred ccccCCCCCCC-chhHHHHHHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCcc------------
Q 043399 124 SEKMSLPSESL-NRFYVINIIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLAL------------ 190 (438)
Q Consensus 124 sE~~a~~N~gL-rgf~vId~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~------------ 190 (438)
.|++++.|.+| ++..+++.||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 112 P~~sw~~N~~Ldka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l 187 (716)
T TIGR00198 112 PLNSWPDNVNLDKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWL 187 (716)
T ss_pred cccCchhhhhHHHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchh
Confidence 79999999999 588888888875 8999999999999999999999999999999999994321
Q ss_pred -------------------------ccccccCCCCCCCChhHHHHHHHHcCCCcccccccc-ccceeecccccccccccc
Q 043399 191 -------------------------ADIATFELPLPNADLPETLASFASRGFDLRETVTFL-DAHGIGVIHCIFFKSHLC 244 (438)
Q Consensus 191 -------------------------~~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALS-GAHTIG~ahC~~F~~RLy 244 (438)
+.. ...+|+|..++++|++.|++||||++|||||+ ||||||++||.+|.+||
T Consensus 188 ~~~~~~~~~l~~p~a~~~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl- 265 (716)
T TIGR00198 188 TSSREDRESLENPLAATEMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI- 265 (716)
T ss_pred hccccccccccccchhhhccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-
Confidence 111 12699999999999999999999999999995 99999999999999998
Q ss_pred ccCCCCCCCChhHHHHhcccccCCC---CCC--ceec---CCCc-----cccc---------------------------
Q 043399 245 NLGRINESLDPGFLNLLRSKCRNVH---SGS--AVLC---SSTN-----HLFN--------------------------- 284 (438)
Q Consensus 245 nf~~~DPtld~~ya~~L~~~Cp~~~---~~~--~~lD---~~tp-----~~Fd--------------------------- 284 (438)
++||++++.|++.|+.+||... +++ ..+| +.+| .||.
T Consensus 266 ---g~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~ 342 (716)
T TIGR00198 266 ---GPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEI 342 (716)
T ss_pred ---CCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccc
Confidence 3899999999999999998522 111 1233 2232 2331
Q ss_pred --------------ccccHHHHhhhhH-HHHH-hhccCC-------hHHHHHhh--hCCCCC
Q 043399 285 --------------VFNLTEALKAVVV-IAII-YYALGS-------QPQQIYMG--QNGVPA 321 (438)
Q Consensus 285 --------------lL~SDqaL~~d~~-~~iV-~yA~~~-------a~AMvKMg--nIgVlT 321 (438)
+|+||++|..|+. +++| .||.++ ++||+||+ .+|++.
T Consensus 343 ~p~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~ 404 (716)
T TIGR00198 343 IPDVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKS 404 (716)
T ss_pred cccccccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchh
Confidence 3678999999986 5688 899864 67999999 467654
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.3e-36 Score=323.60 Aligned_cols=246 Identities=16% Similarity=0.144 Sum_probs=195.8
Q ss_pred CCCCcCc-ccCCCccH-HHHHHHHHHHHHHhC--------CCCcchhHHhhhhcccc-------cCCC-ceEeccCCCCC
Q 043399 61 DSLQYDF-NRDSCPQA-EGRIRAMVWYLRKSR--------SGVAPAFLRLVFRDCSI-------EGCD-SSVLLDEADGV 122 (438)
Q Consensus 61 ~~L~~~f-Y~~sCP~a-e~iVr~~V~~~~~~d--------p~~Ap~lLRL~FHDCfV-------~GCD-gSILLd~t~~~ 122 (438)
..+..+| |.+.+-.. .+.|++.|++.+.+. ...+|.+|||+||++.+ +||+ |+|.+
T Consensus 39 ~p~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf------ 112 (726)
T PRK15061 39 NPMGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRF------ 112 (726)
T ss_pred CCCCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccC------
Confidence 3355555 55554322 367999999998754 37999999999999996 7886 78765
Q ss_pred cccccCCCCCCC-chhHHHHHHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccc----------
Q 043399 123 DSEKMSLPSESL-NRFYVINIIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALA---------- 191 (438)
Q Consensus 123 ~sE~~a~~N~gL-rgf~vId~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~---------- 191 (438)
..|++++.|.+| ++..++++||+++ |..||+||+|+||+..||+.+|||.+++..||.|...+..
T Consensus 113 ~pe~~w~~N~gL~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~ 188 (726)
T PRK15061 113 APLNSWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEW 188 (726)
T ss_pred cccccchhhhhHHHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccc
Confidence 479999999999 6899999999986 5579999999999999999999999999999999865332
Q ss_pred -----------------------------cccccCCCCCCCChhHHHHHHHHcCCCcccccccc-ccceeeccccccccc
Q 043399 192 -----------------------------DIATFELPLPNADLPETLASFASRGFDLRETVTFL-DAHGIGVIHCIFFKS 241 (438)
Q Consensus 192 -----------------------------~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALS-GAHTIG~ahC~~F~~ 241 (438)
..+ ..+|+|..++.+|++.|++||||++|||||+ ||||||++||..|.+
T Consensus 189 l~~~~r~~~~~~l~~pl~a~~mgliyvnpegp-~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~ 267 (726)
T PRK15061 189 LGGDERYSGERDLENPLAAVQMGLIYVNPEGP-NGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDAS 267 (726)
T ss_pred cccccccccccccccchhhhhccceecCCCCC-CCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccc
Confidence 111 2389999999999999999999999999995 999999999999999
Q ss_pred cccccCCCCCCCChhHHHHhc--ccccCCCCC-Cc--eec---CCCcc-----cc-------------------------
Q 043399 242 HLCNLGRINESLDPGFLNLLR--SKCRNVHSG-SA--VLC---SSTNH-----LF------------------------- 283 (438)
Q Consensus 242 RLynf~~~DPtld~~ya~~L~--~~Cp~~~~~-~~--~lD---~~tp~-----~F------------------------- 283 (438)
|| ++||.+++.|+..|. .+||...+. +. .+| ..+|. ||
T Consensus 268 rl----gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~ 343 (726)
T PRK15061 268 HV----GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDG 343 (726)
T ss_pred cc----CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCc
Confidence 98 379999999999995 889963221 11 233 12222 22
Q ss_pred ------------------cccccHHHHhhhhH-HHHH-hhccCC-------hHHHHHh--hhCCCCC
Q 043399 284 ------------------NVFNLTEALKAVVV-IAII-YYALGS-------QPQQIYM--GQNGVPA 321 (438)
Q Consensus 284 ------------------dlL~SDqaL~~d~~-~~iV-~yA~~~-------a~AMvKM--gnIgVlT 321 (438)
-||+||++|+.|+. .++| .||.++ ++||+|| ..+|+++
T Consensus 344 ~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ 410 (726)
T PRK15061 344 AAEDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKS 410 (726)
T ss_pred cccccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchh
Confidence 14688999999986 5588 899764 6799999 4577766
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=99.96 E-value=7.6e-29 Score=245.49 Aligned_cols=228 Identities=14% Similarity=0.051 Sum_probs=170.9
Q ss_pred HHHHHHHHhCCCCcchhHHhhhhcccc-------cCCCce-EeccCCCCCcccccCCCCCC--C-chhHHHHHHHHHHHh
Q 043399 81 AMVWYLRKSRSGVAPAFLRLVFRDCSI-------EGCDSS-VLLDEADGVDSEKMSLPSES--L-NRFYVINIIKEDLEE 149 (438)
Q Consensus 81 ~~V~~~~~~dp~~Ap~lLRL~FHDCfV-------~GCDgS-ILLd~t~~~~sE~~a~~N~g--L-rgf~vId~iKa~lE~ 149 (438)
+++++.+.+..-.++.||||+||++.+ ||++|+ |.| ..|++++.|.+ | +...++++||+++-.
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl------~pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL------APQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC------ccccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 677778888888999999999999996 799999 655 47999999998 8 589999999998732
Q ss_pred -hCC-CCCchhhHHHhhhhccccccCC-----CceeecCCCcCCCCcccccc--ccCCCCCCC------------ChhHH
Q 043399 150 -ICP-GVVSYSDTLALAAREGVVLAGG-----PFYPLHTGRRDSRLALADIA--TFELPLPNA------------DLPET 208 (438)
Q Consensus 150 -~CP-g~VScADIlalAArdAV~~~GG-----P~~~v~~GRrD~~~s~~~~a--~~~LP~p~~------------~v~~L 208 (438)
.-+ ..||+||+|+||+..||+.+|| |.+++.+||.|...+..... ...+|.+.. ..++|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 112 2699999999999999999999 99999999999986532111 113453322 34789
Q ss_pred HHHHHHcCCCccccccccccc-eeeccccccccccccccCCCCC-CCChhHHHHhccc--ccCC--CCCCc--eecCCC-
Q 043399 209 LASFASRGFDLRETVTFLDAH-GIGVIHCIFFKSHLCNLGRINE-SLDPGFLNLLRSK--CRNV--HSGSA--VLCSST- 279 (438)
Q Consensus 209 l~~F~~kGLs~~DlVALSGAH-TIG~ahC~~F~~RLynf~~~DP-tld~~ya~~L~~~--Cp~~--~~~~~--~lD~~t- 279 (438)
++.|.++|||++|||||+||| ++|++|-.++..- + ..+| +||++|+..|... -|.. .+... ..|..+
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~~G~-w---T~~p~~f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g 246 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSKHGV-F---TDRPGVLTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTG 246 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCCCCC-C---cCCCCccccHHHHHHhcccceeeecCCCCCceeeccCCCC
Confidence 999999999999999999997 7999997653211 1 2334 7999999999742 2221 11111 123332
Q ss_pred cccccccccHHHHhhhhH-HHHH-hhccC--C-------hHHHHHhhhCC
Q 043399 280 NHLFNVFNLTEALKAVVV-IAII-YYALG--S-------QPQQIYMGQNG 318 (438)
Q Consensus 280 p~~FdlL~SDqaL~~d~~-~~iV-~yA~~--~-------a~AMvKMgnIg 318 (438)
...+.++++|.+|.+++. +++| .||.+ + ++|+.|+.++.
T Consensus 247 ~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 247 EVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred ceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 223345789999999998 5588 89987 3 46999999874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=99.92 E-value=1.3e-24 Score=235.38 Aligned_cols=227 Identities=15% Similarity=0.086 Sum_probs=164.1
Q ss_pred HHHHHHHHH---HHhCCCCcchhHHhhhhcccc-------cCCCce-EeccCCCCCcccccCCCC--CCC-chhHHHHHH
Q 043399 78 RIRAMVWYL---RKSRSGVAPAFLRLVFRDCSI-------EGCDSS-VLLDEADGVDSEKMSLPS--ESL-NRFYVINII 143 (438)
Q Consensus 78 iVr~~V~~~---~~~dp~~Ap~lLRL~FHDCfV-------~GCDgS-ILLd~t~~~~sE~~a~~N--~gL-rgf~vId~i 143 (438)
.|+++|+++ +....-.++.|||++||++.+ ||++|+ |.| ..|++++.| .+| +.+.++++|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl------~pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRL------EPQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeec------chhcCcccCCHHHHHHHHHHHHHH
Confidence 445555553 555666789999999999996 799998 766 479999999 788 689999999
Q ss_pred HHHHHhhCCCCCchhhHHHhhhhcccccc---CCC--ceeecCCCcCCCCccccccccCCCC---------------CCC
Q 043399 144 KEDLEEICPGVVSYSDTLALAAREGVVLA---GGP--FYPLHTGRRDSRLALADIATFELPL---------------PNA 203 (438)
Q Consensus 144 Ka~lE~~CPg~VScADIlalAArdAV~~~---GGP--~~~v~~GRrD~~~s~~~~a~~~LP~---------------p~~ 203 (438)
|+++.. +.||+||+|+||+..||+.+ ||| .+++.+||.|...... ++++..|. ...
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 998731 27999999999999999999 998 5789999999986542 22233321 122
Q ss_pred ChhHHHHHHHHcCCCcccccccccc-ceeeccccccccccccccCCCCC-CCChhHHHHhccc--ccCCCC--CCce--e
Q 043399 204 DLPETLASFASRGFDLRETVTFLDA-HGIGVIHCIFFKSHLCNLGRINE-SLDPGFLNLLRSK--CRNVHS--GSAV--L 275 (438)
Q Consensus 204 ~v~~Ll~~F~~kGLs~~DlVALSGA-HTIG~ahC~~F~~RLynf~~~DP-tld~~ya~~L~~~--Cp~~~~--~~~~--l 275 (438)
....|++.|.++||+++|||||+|| |++|++|-.++..- + ..+| +|+++|+..|... -+...+ .... .
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~~G~-~---T~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~ 654 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSKHGV-F---TDRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGG 654 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCCCCC-C---cCCCCccccHHHHHHhcCCceeeecCCCCceeeee
Confidence 3567889999999999999999999 59999998654221 1 1334 7999999988753 121111 1111 1
Q ss_pred cCCCc-ccccccccHHHHhhhhH-HHHH-hhccCC---------hHHHHHhhhCC
Q 043399 276 CSSTN-HLFNVFNLTEALKAVVV-IAII-YYALGS---------QPQQIYMGQNG 318 (438)
Q Consensus 276 D~~tp-~~FdlL~SDqaL~~d~~-~~iV-~yA~~~---------a~AMvKMgnIg 318 (438)
|..+. ..+....+|.+|.+++. +++| .||.++ ++|+.|+.+++
T Consensus 655 dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Klm~ld 709 (716)
T TIGR00198 655 DRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKVMNLD 709 (716)
T ss_pred cCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHHHhCC
Confidence 22111 11113367999999988 5588 899875 46999999986
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=99.91 E-value=4.9e-24 Score=230.08 Aligned_cols=226 Identities=13% Similarity=0.048 Sum_probs=168.5
Q ss_pred HHHHHHHHhCCCCcchhHHhhhhcccc-------cCCCce-EeccCCCCCcccccCCCCC--CC-chhHHHHHHHHHHHh
Q 043399 81 AMVWYLRKSRSGVAPAFLRLVFRDCSI-------EGCDSS-VLLDEADGVDSEKMSLPSE--SL-NRFYVINIIKEDLEE 149 (438)
Q Consensus 81 ~~V~~~~~~dp~~Ap~lLRL~FHDCfV-------~GCDgS-ILLd~t~~~~sE~~a~~N~--gL-rgf~vId~iKa~lE~ 149 (438)
.++++.+....-..|.|||++||++.+ +|++|+ |.|. .|++++.|. +| +.++++++||+++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 567777777777899999999999996 799999 7664 799999999 78 589999999999854
Q ss_pred hC--CCCCchhhHHHhhhhcccccc---CC--CceeecCCCcCCCCccccccc---cCCCCCC------------CChhH
Q 043399 150 IC--PGVVSYSDTLALAAREGVVLA---GG--PFYPLHTGRRDSRLALADIAT---FELPLPN------------ADLPE 207 (438)
Q Consensus 150 ~C--Pg~VScADIlalAArdAV~~~---GG--P~~~v~~GRrD~~~s~~~~a~---~~LP~p~------------~~v~~ 207 (438)
.- ...||+||+|+||+..||+.+ || |.+++.+||.|...... +++ ..+|.++ .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHH
Confidence 32 236999999999999999998 68 99999999999986532 222 2466543 12378
Q ss_pred HHHHHHHcCCCccccccccccc-eeeccccccccccccccCCCCC-CCChhHHHHhccc--ccCCCC--CCce--ecCCC
Q 043399 208 TLASFASRGFDLRETVTFLDAH-GIGVIHCIFFKSHLCNLGRINE-SLDPGFLNLLRSK--CRNVHS--GSAV--LCSST 279 (438)
Q Consensus 208 Ll~~F~~kGLs~~DlVALSGAH-TIG~ahC~~F~~RLynf~~~DP-tld~~ya~~L~~~--Cp~~~~--~~~~--lD~~t 279 (438)
|++.|.++||+++|||||+||| ++|.+|-.++.. .+ ...| +|+++|+..|... -+...+ .... .|..|
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~~G-~~---T~~p~~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~t 670 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSKHG-VF---TDRPGVLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKT 670 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCCCC-CC---cCCCCccccHHHHHHhcCCceeeecCCCCCceeeccCCC
Confidence 9999999999999999999997 899999765321 11 1234 7999999888742 222111 1111 12222
Q ss_pred cccccc--cccHHHHhhhhH-HHHH-hhccC--C-------hHHHHHhhhCC
Q 043399 280 NHLFNV--FNLTEALKAVVV-IAII-YYALG--S-------QPQQIYMGQNG 318 (438)
Q Consensus 280 p~~Fdl--L~SDqaL~~d~~-~~iV-~yA~~--~-------a~AMvKMgnIg 318 (438)
.. ..+ +.+|.+|.+++. +++| .||.+ + ++|+.|+.|++
T Consensus 671 g~-~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 671 GE-VKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred cc-eeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 11 122 477999988887 5588 89987 2 46999999986
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1.2e-18 Score=182.50 Aligned_cols=230 Identities=15% Similarity=0.108 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHhCC--------CCcchhHHhhhhcccc-------cCCCceEeccCCCCCcccccCCCCCCC-chhHHHH
Q 043399 78 RIRAMVWYLRKSRS--------GVAPAFLRLVFRDCSI-------EGCDSSVLLDEADGVDSEKMSLPSESL-NRFYVIN 141 (438)
Q Consensus 78 iVr~~V~~~~~~dp--------~~Ap~lLRL~FHDCfV-------~GCDgSILLd~t~~~~sE~~a~~N~gL-rgf~vId 141 (438)
.|...+++.+.... ..+|-+|||+||-+++ +|..+. .-+|..+.+.|.|.+| +++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G-----~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGG-----QQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCC-----ceecccccCCCcccchHHHHHHhh
Confidence 55566666665431 3789999999999986 333322 2256789999999999 6999999
Q ss_pred HHHHHHHhhCCCCCchhhHHHhhhhccccccCCCceeecCCCcCCCCccc------------------------------
Q 043399 142 IIKEDLEEICPGVVSYSDTLALAAREGVVLAGGPFYPLHTGRRDSRLALA------------------------------ 191 (438)
Q Consensus 142 ~iKa~lE~~CPg~VScADIlalAArdAV~~~GGP~~~v~~GRrD~~~s~~------------------------------ 191 (438)
.||+++ +..+|.||++.||+..|++.+|++.+.+..||.|--.+..
T Consensus 146 PIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 999986 5699999999999999999999999999999999766543
Q ss_pred --------cccccCCCCCCCChhHHHHHHHHcCCCcccccccc-ccceeeccccccccc-------------cc------
Q 043399 192 --------DIATFELPLPNADLPETLASFASRGFDLRETVTFL-DAHGIGVIHCIFFKS-------------HL------ 243 (438)
Q Consensus 192 --------~~a~~~LP~p~~~v~~Ll~~F~~kGLs~~DlVALS-GAHTIG~ahC~~F~~-------------RL------ 243 (438)
.. ++..|+|-.+..+++..|++|++|++|+|||+ ||||+|++|-..=.+ .-
T Consensus 222 MGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~vg~ePe~a~ie~qGlGW~~~ 300 (730)
T COG0376 222 MGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNVGPEPEAAPIEQQGLGWANT 300 (730)
T ss_pred eeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhcCCCccccchhhhccccccc
Confidence 22 34589999999999999999999999999998 799999999755100 00
Q ss_pred ccc--C------------CCCCC-CChhHHHHhccccc------CCCCC----C----ceecCCCcccc---cccccHHH
Q 043399 244 CNL--G------------RINES-LDPGFLNLLRSKCR------NVHSG----S----AVLCSSTNHLF---NVFNLTEA 291 (438)
Q Consensus 244 ynf--~------------~~DPt-ld~~ya~~L~~~Cp------~~~~~----~----~~lD~~tp~~F---dlL~SDqa 291 (438)
|+- | ...|+ +++.|+..|-..-+ ..... + ...|...|... .||++|.+
T Consensus 301 ~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~MlttDla 380 (730)
T COG0376 301 YGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLTTDLA 380 (730)
T ss_pred cCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeeccchh
Confidence 000 0 23454 89999888854322 11100 0 01222222222 38999999
Q ss_pred HhhhhHH-HHH-hhccCC-------hHHHHHhhhC
Q 043399 292 LKAVVVI-AII-YYALGS-------QPQQIYMGQN 317 (438)
Q Consensus 292 L~~d~~~-~iV-~yA~~~-------a~AMvKMgnI 317 (438)
|..|+.+ .|. .|..+. +.|.-||..-
T Consensus 381 Lr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHR 415 (730)
T COG0376 381 LRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHR 415 (730)
T ss_pred hhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhc
Confidence 9999874 355 555442 5788888753
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.00072 Score=72.92 Aligned_cols=165 Identities=16% Similarity=0.138 Sum_probs=110.6
Q ss_pred HHHHHHHHhCCCCcchhHHhhhhcccc-------cCCCceE-eccCCCCCcccccCCCCCC--C-chhHHHHHHHHHHHh
Q 043399 81 AMVWYLRKSRSGVAPAFLRLVFRDCSI-------EGCDSSV-LLDEADGVDSEKMSLPSES--L-NRFYVINIIKEDLEE 149 (438)
Q Consensus 81 ~~V~~~~~~dp~~Ap~lLRL~FHDCfV-------~GCDgSI-LLd~t~~~~sE~~a~~N~g--L-rgf~vId~iKa~lE~ 149 (438)
.++++.+....-....|+--+|-.+-+ +|.+|.- .| ...++.+.|.. | +-+.+++.|.+.+.
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirL------aPqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRL------APQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEee------cccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 456666766666777888888887765 5777653 34 35677888864 4 46788888888775
Q ss_pred hCCCCCchhhHHHhhhhcccccc---CCCce--eecCCCcCCCCccccccccC--C-CC------------CCCChhHHH
Q 043399 150 ICPGVVSYSDTLALAAREGVVLA---GGPFY--PLHTGRRDSRLALADIATFE--L-PL------------PNADLPETL 209 (438)
Q Consensus 150 ~CPg~VScADIlalAArdAV~~~---GGP~~--~v~~GRrD~~~s~~~~a~~~--L-P~------------p~~~v~~Ll 209 (438)
..||.||+|+|++..+|+.+ +|-.+ |+.+||.|...... ++... | |- ....-.-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqt-Dv~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQT-DVESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhc-chhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 46999999999999999864 67554 56789999865321 11111 1 11 111233456
Q ss_pred HHHHHcCCCccccccccccc-eeecc----ccccccccccccCCCCCCCChhHHHHhcc
Q 043399 210 ASFASRGFDLRETVTFLDAH-GIGVI----HCIFFKSHLCNLGRINESLDPGFLNLLRS 263 (438)
Q Consensus 210 ~~F~~kGLs~~DlVALSGAH-TIG~a----hC~~F~~RLynf~~~DPtld~~ya~~L~~ 263 (438)
+.=+-.+|+.-||.+|.||- -+|.- .-..|.+| .-++.++|+..|..
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~n~g~s~~GVfT~~-------pg~LtndFFvnLlD 652 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGANYGGSKHGVFTDR-------PGVLTNDFFVNLLD 652 (730)
T ss_pred HHHHHhccCCccceEEEcceEeeccCCCCCccceeccC-------cccccchhhhhhhh
Confidence 77777899999999999864 44443 33445544 23788887777754
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=27.42 E-value=47 Score=34.69 Aligned_cols=79 Identities=11% Similarity=0.133 Sum_probs=41.7
Q ss_pred chhHHHHHHHHHHHhhCCCCCchhhHHHhhhhccc--cccCCCceeecCCCcCCCCccccccccCCCCCC---CChhHHH
Q 043399 135 NRFYVINIIKEDLEEICPGVVSYSDTLALAAREGV--VLAGGPFYPLHTGRRDSRLALADIATFELPLPN---ADLPETL 209 (438)
Q Consensus 135 rgf~vId~iKa~lE~~CPg~VScADIlalAArdAV--~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~p~---~~v~~Ll 209 (438)
.|++.+..++++ .|.|-=.+.+....|+ ..+|-..+..++||.|...-.+.......+... ..+.++.
T Consensus 148 eGi~Aa~~L~~e-------GI~~N~TlvFS~~QA~aaaeAGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~ 220 (333)
T PTZ00411 148 EGIQAAKALEKE-------GIHCNLTLLFSFAQAVACAQAGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIY 220 (333)
T ss_pred HHHHHHHHHHHC-------CCceeEeEecCHHHHHHHHHcCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHH
Confidence 466665544432 2444333333333322 335777889999999654322211111112122 3467888
Q ss_pred HHHHHcCCCcc
Q 043399 210 ASFASRGFDLR 220 (438)
Q Consensus 210 ~~F~~kGLs~~ 220 (438)
+.|++.|+..+
T Consensus 221 ~~~k~~g~~T~ 231 (333)
T PTZ00411 221 NYYKKHGYKTI 231 (333)
T ss_pred HHHHHcCCCeE
Confidence 88999898654
No 20
>PF12113 SVM_signal: SVM protein signal sequence; InterPro: IPR021970 This domain is presumed to be a signal peptide sequence found in Sequence-variable mosaic (SVM) proteins []. It is found in phytoplasmas. This presumed signal sequence is about 30 amino acids in length.
Probab=23.38 E-value=56 Score=23.48 Aligned_cols=17 Identities=35% Similarity=0.876 Sum_probs=12.3
Q ss_pred hhHHHHHHHHH-HHhhhh
Q 043399 403 THCYFLYLYLF-FLGLIL 419 (438)
Q Consensus 403 ~~~~~~~~~~~-~~~~~~ 419 (438)
.++..+++||| ||||.+
T Consensus 6 nq~~ii~i~Lf~~LGL~f 23 (33)
T PF12113_consen 6 NQFKIINIFLFIFLGLFF 23 (33)
T ss_pred hchhhhhhHHHHHHHHHh
Confidence 46778888865 678765
No 21
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=21.80 E-value=49 Score=30.76 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=28.2
Q ss_pred CCChhHHHHHHHHcCCCccccccc-cccceeecccc
Q 043399 202 NADLPETLASFASRGFDLRETVTF-LDAHGIGVIHC 236 (438)
Q Consensus 202 ~~~v~~Ll~~F~~kGLs~~DlVAL-SGAHTIG~ahC 236 (438)
.+++.+.+-.|++|||++.++=++ =.+|-||++.-
T Consensus 30 ~ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r~ 65 (151)
T KOG0400|consen 30 ADDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVRF 65 (151)
T ss_pred HHHHHHHHHHHHHcCCChhHceeeeecccCcchhhe
Confidence 346777788999999999988554 59999999864
No 22
>PRK12346 transaldolase A; Provisional
Probab=20.02 E-value=74 Score=33.06 Aligned_cols=81 Identities=7% Similarity=-0.005 Sum_probs=44.9
Q ss_pred chhHHHHHHHHHHHhhCCCCCchhhHHHhhhhccc--cccCCCceeecCCCcCCCCccccccccCCCC---CCCChhHHH
Q 043399 135 NRFYVINIIKEDLEEICPGVVSYSDTLALAAREGV--VLAGGPFYPLHTGRRDSRLALADIATFELPL---PNADLPETL 209 (438)
Q Consensus 135 rgf~vId~iKa~lE~~CPg~VScADIlalAArdAV--~~~GGP~~~v~~GRrD~~~s~~~~a~~~LP~---p~~~v~~Ll 209 (438)
.|++.+..++++ .|+|-=.+.+....|+ ..+|-..+..++||.|............-|. +-..+.++.
T Consensus 137 eGi~A~~~L~~~-------GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~ 209 (316)
T PRK12346 137 EGIRAAEELEKE-------GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPMDPYVVEEDPGVKSVRNIY 209 (316)
T ss_pred HHHHHHHHHHHC-------CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccccccccccCCChHHHHHHHH
Confidence 366665544432 3555554444444333 3468888999999998642211110011111 123577888
Q ss_pred HHHHHcCCCcccc
Q 043399 210 ASFASRGFDLRET 222 (438)
Q Consensus 210 ~~F~~kGLs~~Dl 222 (438)
+.|++.|+..+=|
T Consensus 210 ~~~k~~~~~T~Vm 222 (316)
T PRK12346 210 DYYKQHRYETIVM 222 (316)
T ss_pred HHHHHcCCCcEEE
Confidence 8998889865433
Done!