Citrus Sinensis ID: 043407

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Protein Sequence
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccccEEEEcccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHcccccEEEEcccHcHEEEcccccccHcHccccEcccccccEEEEEEEEcccccccHHHHHcccccccccHEHHHHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
MEIANALAYlhvgfprpivfkniklssilfdEDHVAKLFdfslaesipdgethikdaipigIMGFVATEyvttgdynekcdvFSFGVLLLVLLTGqklysideagdrhwl
Flexible Loop (DISEMBL)
MEIANALaylhvgfpRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGqklysideagdrhwl
Low Complexity Region (SEG)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGvlllvllTGQKLYSIDEAGDRHWL
Disordered region (IsUnstruct)
***ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSID********
Disordered Region (DISOPRED)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL************
Disordered Region (DISEMBL)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL
Disordered Region (DISPRO)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	110	2.2.26 [Sep-21-2011]
O64798	389	Inactive serine/threonine	no	no	0.890	0.251	0.448	2e-18
P93050	617	Probable LRR receptor-lik	no	no	0.927	0.165	0.475	3e-18
Q8GXZ3	410	Serine/threonine-protein	no	no	0.872	0.234	0.465	7e-18
Q9LFP7	493	Probable receptor-like pr	no	no	0.845	0.188	0.452	1e-17
Q9SJG2	494	Probable receptor-like pr	no	no	0.836	0.186	0.494	2e-17
O80795	372	Probable inactive recepto	no	no	0.890	0.263	0.464	3e-17
Q9SA25	720	Wall-associated receptor	no	no	0.9	0.137	0.42	4e-17
C0LGW6	966	LRR receptor-like serine/	no	no	0.945	0.107	0.429	6e-17
Q9SRH7	490	Receptor-like serine/thre	no	no	0.845	0.189	0.442	6e-17
Q9LMN8	741	Wall-associated receptor	no	no	0.872	0.129	0.443	7e-17

>sp|O64798|Y1747_ARATH Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/98 (44%), Positives = 65/98 (66%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SIP+GET ++     G
Sbjct: 154 DIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQVDYIAG 213

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
            + ++   Y+  G  +E+ DVF+ G  + +LL G+K++
Sbjct: 214 TVDYLKPNYLKHGVVSEETDVFAVGHSMQMLLMGEKIF 251

Arabidopsis thaliana (taxid: 3702)

>sp|P93050|RKF3_ARATH Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/103 (47%), Positives = 64/103 (62%), Gaps = 1/103 (0%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +A  LAYLH G    I+ ++IK S+IL DE   AK+ DF LA+  P+G TH+   +  G 
Sbjct: 393 MARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVA-GT 451

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG 105
           MG+VA EY   G   EK DV+SFGV+LL LL+ +K    DE G
Sbjct: 452 MGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEG 494

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 47/101 (46%), Positives = 68/101 (67%), Gaps = 5/101 (4%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-ETHIKDAIPIGI 62
           A  LA+LH    RP+++++ K S+IL D D+ AKL DF LA++ P G ETH+   + +G 
Sbjct: 182 AKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV-MGT 239

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
            G+ A EYV TG    + DV+SFGV+LL +LTG+K  S+D+
Sbjct: 240 YGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRK--SVDK 278

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 2/95 (2%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L++LH    +P+++++ K S+IL D D+ AKL DF LA+  PD G+TH+   + +G 
Sbjct: 257 AKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRV-MGT 315

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            G+ A EYV TG    K DV+SFGV+LL +LTG++
Sbjct: 316 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 350

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SJG2|Y2296_ARATH Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=3 SV=1

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 1/93 (1%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A ALAYLH      +V ++IK S+IL D++  AKL DF LA+ +  GE+HI   + +G  
Sbjct: 291 AQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRV-MGTF 349

Query: 64  GFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G+VA EY  TG  NEK D++SFGVLLL  +TG+
Sbjct: 350 GYVAPEYANTGLLNEKSDIYSFGVLLLEAITGR 382

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O80795|Y1652_ARATH Probable inactive receptor-like protein kinase At1g65250 OS=Arabidopsis thaliana GN=At1g65250 PE=2 SV=1

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 1/99 (1%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA ALAYLH  FPRP V++ +   +IL DED VAKL DFS   SIP+GET ++    +G
Sbjct: 153 DIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVRVDRDVG 212

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLL-LVLLTGQKLY 99
           +  + A  YV +G  ++K DVF+FG+ +   LL G + Y
Sbjct: 213 LYSYFADNYVRSGLVSDKTDVFAFGIFMGHRLLLGYEYY 251

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 1/100 (1%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+A+AL+YLH     PI  +++K ++IL DE H AK+ DF ++ S+   +TH+   +  G
Sbjct: 495 EVADALSYLHSAVSIPIYHRDVKSTNILLDEKHRAKVSDFGISRSVAIDDTHLTTIVQ-G 553

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSI 101
            +G+V  EY+ +  +  K DV+SFGVLL+ LLTG+K  S+
Sbjct: 554 TIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSL 593

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 3/107 (2%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A  LAYLH      I+ ++IK S+IL DE+  A L DF +A+SIP  +TH    + +G +
Sbjct: 755 AQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIPASKTHASTYV-LGTI 813

Query: 64  GFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
           G++  EY  T   NEK D++SFG++LL LLTG+K  ++D   + H L
Sbjct: 814 GYIDPEYARTSRINEKSDIYSFGIVLLELLTGKK--AVDNEANLHQL 858

Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 2/95 (2%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L++LH    +P+++++ K S+IL D ++ AKL DF LA+  PD G+TH+   + +G 
Sbjct: 251 AKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDEGKTHVSTRV-MGT 309

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            G+ A EYV TG    K DV+SFGV+LL +LTG++
Sbjct: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 344

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 1/97 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +E+A  LAYLH     PI+ ++IK ++IL DE+  AK+ DF  ++ IP  +  +   +  
Sbjct: 519 IEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQ- 577

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
           G +G++  EY TTG  NEK DV+SFGV+L+ LL+GQK
Sbjct: 578 GTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQK 614

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
255542662	330	serine-threonine protein kinase, plant-t	0.981	0.327	0.549	2e-26
224123144	344	predicted protein [Populus trichocarpa]	0.863	0.276	0.583	5e-26
255582635	331	receptor protein kinase, putative [Ricin	0.881	0.293	0.602	2e-25
255542658	356	serine-threonine protein kinase, plant-t	0.9	0.278	0.56	1e-23
255542656	331	serine-threonine protein kinase, plant-t	0.863	0.287	0.572	5e-23
255542676	247	serine-threonine protein kinase, plant-t	0.9	0.400	0.59	2e-22
255542668	307	serine-threonine protein kinase, plant-t	0.872	0.312	0.556	2e-19
356573466	419	PREDICTED: probable receptor-like protei	0.845	0.221	0.505	1e-18
356573491	680	PREDICTED: probable receptor-like protei	0.845	0.136	0.494	2e-18
359495254	331	PREDICTED: wall-associated receptor kina	0.9	0.299	0.52	2e-18

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  122 bits (307), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/111 (54%), Positives = 83/111 (74%), Gaps = 3/111 (2%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IAN + Y+H  FPRPIV +NIK S+IL DED+VAKL DFSL  SIP+G++ ++D I  G
Sbjct: 149 DIANVVVYIHTAFPRPIVHRNIKASNILLDEDYVAKLSDFSLCVSIPEGKSRVRD-IMAG 207

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL--YSIDEAGDRHWL 110
            MG +A+E + TG +NEK DV+SFGV+LLV+LTGQ+   +S  E G++  L
Sbjct: 208 TMGLIASESLATGYFNEKSDVYSFGVVLLVVLTGQRSFDFSRTETGEQFLL 258

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/96 (58%), Positives = 78/96 (81%), Gaps = 1/96 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           M++ANA+A+LH  F +PIVF+NIK  +IL D++H AKL DFS++ SIP GE+H++D++  
Sbjct: 161 MDMANAVAFLHAAFSKPIVFRNIKPLNILLDDNHEAKLSDFSISISIPKGESHVRDSVA- 219

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G  G +A EY+TTG++NEK DVF+FGV LLVLL+GQ
Sbjct: 220 GATGLIAPEYLTTGNFNEKQDVFNFGVFLLVLLSGQ 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 74/98 (75%), Gaps = 1/98 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +EIANA++YLH  F RPIVF+NIK  +I  DE HVAKL DFSLA SIP+GE+H+KD +  
Sbjct: 154 VEIANAVSYLHTAFSRPIVFRNIKPLNIFLDECHVAKLSDFSLAVSIPEGESHVKDMLA- 212

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
           G  G +A EY  T  +NE  DV++FGV LL+LLTGQK+
Sbjct: 213 GAWGLIAPEYAKTSCFNESQDVYNFGVFLLMLLTGQKV 250

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  113 bits (283), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/100 (56%), Positives = 76/100 (76%), Gaps = 1/100 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++ AN +AYLH   PRP+V ++I LS+I  DED+VAK+ DF+++ SI +GETHI+D + +
Sbjct: 158 VDAANVIAYLHTACPRPVVHRDITLSNIWLDEDYVAKVTDFTVSMSILEGETHIEDFV-L 216

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G  G+ A EYV +G +NEK DVFSFGVLLLVLLT QK + 
Sbjct: 217 GTCGYAAPEYVRSGIFNEKIDVFSFGVLLLVLLTDQKPFQ 256

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  111 bits (278), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 73/96 (76%), Gaps = 1/96 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A+ +AYLH  FPRPIV ++I L+SIL DED  AK+  FSL+ SIP+GETHI+D +  
Sbjct: 149 VDVASVIAYLHTAFPRPIVHRDISLASILLDEDCAAKVTGFSLSISIPEGETHIEDEV-A 207

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G +G+VA EY     +NEK DV+SFGV+LLVLLTG 
Sbjct: 208 GTIGYVAPEYFMKRMFNEKIDVYSFGVVLLVLLTGH 243

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542676|ref|XP_002512401.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548362|gb|EEF49853.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  109 bits (272), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/100 (59%), Positives = 77/100 (77%), Gaps = 1/100 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++ AN +AYLH  FPRP+V ++I LS++  DED VAK+ DFSL+ SIP+GETHI+D + +
Sbjct: 145 VDAANVIAYLHTAFPRPVVHRHITLSNVWLDEDSVAKVTDFSLSMSIPEGETHIEDFV-M 203

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G  G+ A EY  +G +NEK DVFSFGVLLLVLLTGQK + 
Sbjct: 204 GTCGYAAPEYARSGIFNEKIDVFSFGVLLLVLLTGQKPFQ 243

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542668|ref|XP_002512397.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548358|gb|EEF49849.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 77/97 (79%), Gaps = 1/97 (1%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A+ ++YLH  FPRPIV ++I LS+IL DED++AK+  FSL+ SIP+G+THI+D + +
Sbjct: 125 VDVASVISYLHSAFPRPIVHRDITLSNILLDEDYIAKVTGFSLSMSIPEGKTHIEDEV-V 183

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
           G  G++A  Y  T  +NEK DV+SFGVLLLVLLTGQ+
Sbjct: 184 GTPGYLAPAYFKTLMFNEKIDVYSFGVLLLVLLTGQQ 220

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573466|ref|XP_003554880.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score = 97.4 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPIGI 62
           ANALA+LH    RP++F++ K S++L DED+ AKL DF LA+  P G+ TH+   + +G 
Sbjct: 161 ANALAFLHEEASRPVIFRDFKTSNVLLDEDYNAKLSDFGLAQDAPMGDKTHVSTEV-MGT 219

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            G+ A EYV TG    K DV+SFGV+LL +LTG+K
Sbjct: 220 QGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRK 254

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356573491|ref|XP_003554892.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 2/95 (2%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPIGI 62
           ANALA+LH    RP++F++ K S++L DED+ AKL DF LA+  P G+ TH+   + +G 
Sbjct: 416 ANALAFLHEEASRPVIFRDFKTSNVLLDEDYNAKLSDFGLAQDAPVGDKTHVSTEV-MGT 474

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            G+ A EYV TG    K DV+SFGV+LL +LTG++
Sbjct: 475 QGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR 509

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495254|ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 72/100 (72%), Gaps = 1/100 (1%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IAN +AYLH+ FPR I+  +IK SS   D+D  AKL DFSL+ ++P+GE H++D I  G
Sbjct: 153 DIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCAAKLSDFSLSITLPEGEMHVEDEIR-G 211

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSI 101
             G++A E + +G Y EK DVFSFG+LLL LL G++ +SI
Sbjct: 212 TFGYLAPETLISGVYTEKNDVFSFGILLLELLIGKRAHSI 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	110
TAIR|locus:2008818	389	AT1G67470 [Arabidopsis thalian	0.890	0.251	0.428	5.9e-17
TAIR|locus:2206235	372	AT1G65250 [Arabidopsis thalian	0.772	0.228	0.494	1.4e-16
TAIR|locus:2077730	512	AT3G59110 [Arabidopsis thalian	0.836	0.179	0.462	1.3e-15
TAIR|locus:2200375	396	AT1G65190 [Arabidopsis thalian	0.772	0.214	0.494	1.4e-15
TAIR|locus:2150019	410	AT5G01020 [Arabidopsis thalian	0.872	0.234	0.425	2.5e-15
TAIR|locus:2045620	494	AT2G42960 [Arabidopsis thalian	0.836	0.186	0.451	3.1e-15
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.854	0.281	0.4	9.6e-15
TAIR|locus:2064920	435	AT2G39110 [Arabidopsis thalian	0.863	0.218	0.432	1.1e-14
TAIR|locus:2147805	493	AT5G15080 [Arabidopsis thalian	0.881	0.196	0.405	1.1e-14
TAIR|locus:2157101	494	AT5G35580 [Arabidopsis thalian	0.9	0.200	0.413	1.1e-14

TAIR|locus:2008818 AT1G67470 [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 5.9e-17, P = 5.9e-17
 Identities = 42/98 (42%), Positives = 61/98 (62%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SIP+GET ++     G
Sbjct:   154 DIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQVDYIAG 213

Query:    62 IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLY 99
              + ++   Y+  G  +E+ DVF+ G        G+K++
Sbjct:   214 TVDYLKPNYLKHGVVSEETDVFAVGHSMQMLLMGEKIF 251

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2206235 AT1G65250 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 42/85 (49%), Positives = 57/85 (67%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             +IA ALAYLH  FPRP V++ +   +IL DED VAKL DFS   SIP+GET ++    +G
Sbjct:   153 DIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVRVDRDVG 212

Query:    62 IMGFVATEYVTTGDYNEKCDVFSFG 86
             +  + A  YV +G  ++K DVF+FG
Sbjct:   213 LYSYFADNYVRSGLVSDKTDVFAFG 237

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2077730 AT3G59110 [Arabidopsis thaliana (taxid:3702)]

 Score = 204 (76.9 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 43/93 (46%), Positives = 57/93 (61%)

Query:     4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
             A ALAYLH      +V ++IK S+IL D+D  AKL DF LA+ +  GE+HI   + +G  
Sbjct:   298 AQALAYLHEAIEPKVVHRDIKASNILIDDDFNAKLSDFGLAKLLDSGESHITTRV-MGTF 356

Query:    64 GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
             G+VA EY  TG  NEK D++SFG       TG+
Sbjct:   357 GYVAPEYANTGLLNEKSDIYSFGVLLLETITGR 389

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2200375 AT1G65190 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 42/85 (49%), Positives = 54/85 (63%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             +IA ALAYLH  FPRP+V+  +   +IL DED VAKL DFS   SIP+GET ++     G
Sbjct:   150 DIATALAYLHTAFPRPLVYMILSHRNILLDEDGVAKLTDFSHCVSIPEGETFVRVEAEDG 209

Query:    62 IMGFVATEYVTTGDYNEKCDVFSFG 86
                + A  YV +   +EK DVF+FG
Sbjct:   210 FYSYFADNYVNSVVVSEKTDVFAFG 234

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2150019 AT5G01020 [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 2.5e-15, P = 2.5e-15
 Identities = 43/101 (42%), Positives = 62/101 (61%)

Query:     4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-ETHIKDAIPIGI 62
             A  LA+LH    RP+++++ K S+IL D D+ AKL DF LA++ P G ETH+   + +G 
Sbjct:   182 AKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV-MGT 239

Query:    63 MGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDE 103
              G+ A EYV TG    + DV+SFG       TG+K  S+D+
Sbjct:   240 YGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRK--SVDK 278

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

TAIR|locus:2045620 AT2G42960 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 42/93 (45%), Positives = 57/93 (61%)

Query:     4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
             A ALAYLH      +V ++IK S+IL D++  AKL DF LA+ +  GE+HI   + +G  
Sbjct:   291 AQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRV-MGTF 349

Query:    64 GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
             G+VA EY  TG  NEK D++SFG       TG+
Sbjct:   350 GYVAPEYANTGLLNEKSDIYSFGVLLLEAITGR 382

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 9.6e-15, P = 9.6e-15
 Identities = 38/95 (40%), Positives = 58/95 (61%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             EIA+++ YLH  FP  IV +NI  ++I  DE+  AKL DF    +IP+GE +++D +  G
Sbjct:   153 EIASSVTYLHTAFPETIVHRNINPTNIFIDENWTAKLSDFWFCVAIPEGELYVEDDVK-G 211

Query:    62 IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
             ++GFV  +Y  T    EK D++SFG       +G+
Sbjct:   212 VIGFVDPDYYWTMKVTEKVDIYSFGVVMLVLLSGR 246

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2064920 AT2G39110 [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 42/97 (43%), Positives = 58/97 (59%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP-DGETHIKDAIPI 60
             + A  LAYLH G    I+F++ K S+IL DE+  AKL DF LA   P DG TH+  A+ +
Sbjct:   205 DTARGLAYLHQGMEFQIIFRDFKSSNILLDENWNAKLSDFGLARMGPSDGITHVSTAV-V 263

Query:    61 GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQK 97
             G +G+ A EY+ TG    K DV+S+G       TG++
Sbjct:   264 GTIGYAAPEYIQTGHLTAKSDVWSYGIFLYELITGRR 300

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2147805 AT5G15080 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 41/101 (40%), Positives = 62/101 (61%)

Query:     4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
             A  L++LH    +P+++++ K S+IL D D+ AKL DF LA+  PD G+TH+   + +G 
Sbjct:   257 AKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRV-MGT 315

Query:    63 MGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDE 103
              G+ A EYV TG    K DV+SFG       TG++  S+D+
Sbjct:   316 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRR--SMDK 354

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2157101 AT5G35580 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 43/104 (41%), Positives = 61/104 (58%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPI 60
             E A  L +LH    +PI++++ K S+IL D D+ AKL DF LA+  P G+ TH+   + +
Sbjct:   187 EAAKGLQFLHEA-EKPIIYRDFKASNILLDSDYTAKLSDFGLAKDGPQGDDTHVSTRV-M 244

Query:    61 GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEA 104
             G  G+ A EY+ TG    K DV+SFG       TG+K  S+D A
Sbjct:   245 GTQGYAAPEYIMTGHLTAKSDVYSFGVVLLELLTGRK--SVDIA 286

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	110
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	6e-12
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-11
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-10
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-09
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-09
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	7e-09
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-08
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-08
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	6e-08
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	9e-08
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	9e-08
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-07
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-07
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-07
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	3e-07
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	3e-07
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	4e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-07
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	6e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	7e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-07
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	9e-07
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-06
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-06
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-06
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	1e-06
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-06
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	2e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-06
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-06
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-06
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-06
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-06
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	4e-06
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	5e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	5e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	5e-06
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-06
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-06
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	7e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-05
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-05
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	9e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-05
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-04
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	1e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-04
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-04
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-04
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	3e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	3e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	4e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	5e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	5e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	6e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	6e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	7e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	7e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	8e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	8e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	8e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	8e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	8e-04
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	9e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.001
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.001
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.001
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.002
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	0.002
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.002
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	0.002
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.003
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.003
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.004
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.004
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.004
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 64.1 bits (157), Expect = 1e-13
 Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 6/102 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I +AL YLH    + IV +++K  +IL DED   KL DF LA  +  GE        +G
Sbjct: 105 QILSALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT---FVG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
              ++A E +    Y +  D++S GV+L  LLTG+  +  D+
Sbjct: 159 TPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDD 200

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 59.6 bits (145), Expect = 3e-12
 Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIP 59
           ++I   L YLH      I+ +++K  +IL D D    KL DF L++ +   ++ +K  + 
Sbjct: 99  LQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV- 154

Query: 60  IGIMGFVATE-YVTTGDYNEKCDVFSFGVLLLVL 92
            G   ++A E  +  G Y+EK D++S GV+L  L
Sbjct: 155 -GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 60.2 bits (147), Expect = 3e-12
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD---A 57
           ++IA  + YL     +  V +++   + L  ED V K+ DF L+  + D + + K     
Sbjct: 112 IQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGK 168

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           +PI  M   A E +  G +  K DV+SFGVLL
Sbjct: 169 LPIRWM---APESLKDGIFTSKSDVWSFGVLL 197

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 59.5 bits (145), Expect = 6e-12
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--IPI 60
           IA  + YL     +  + +++   + L  E+ V K+ DF L+  + D + + K    +PI
Sbjct: 111 IARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPI 167

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLYS 100
             M   A E +  G +  K DV+SFGVLL  + T G++ Y 
Sbjct: 168 RWM---APESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYP 205

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL YLH      I+++++K  +IL D D   KL DF LA+ +    +        G
Sbjct: 101 EIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT--FCG 155

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +    Y +  D +S GVLL  +LTG+
Sbjct: 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 56.8 bits (138), Expect = 6e-11
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--IPI 60
           IA  + YL     +  + +++   + L  E+ V K+ DF L+  + D + +      +PI
Sbjct: 112 IARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPI 168

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLYS 100
             M   A E +  G +  K DV+SFGVLL  + T G++ Y 
Sbjct: 169 RWM---APESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYP 206

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   LAYLH      IV ++IK ++IL D D V KL DF  A+ + D ET        G
Sbjct: 109 QILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRG 165

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E +   +Y    D++S G  ++ + TG+  +S
Sbjct: 166 TPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWS 204

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.0 bits (128), Expect = 8e-10
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIP 59
            +I +AL YLH    + I+ ++IK  +IL D D  V KL DF LA+ +PD  +       
Sbjct: 108 AQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPAL 164

Query: 60  ----IGIMGFVATEYVT---TGDYNEKCDVFSFGVLLLVLLTGQKLYSID 102
               +G  G++A E +        +   D++S G+ L  LLTG   +  +
Sbjct: 165 PSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGE 214

Length = 384

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 22/118 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE--SIPDGETHIKDAIP 59
           +I   L YLH      I+ +++K  +IL DE+ V K+ DF LA+                
Sbjct: 106 QILRGLEYLHS---NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLT------ 156

Query: 60  IGIMGFVAT-EYV------TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
                FV T  Y+          Y  K DV+S GV+L  LLTG+  +S +   D+  L
Sbjct: 157 ----TFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQL 210

Length = 260

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 6/100 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL YLH    + I+ ++IK  +IL DE     + DF++A  +         +   G
Sbjct: 108 EIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS---G 161

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSI 101
             G++A E +    Y+   D +S GV     L G++ Y  
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG 201

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+   L YLH      I+ ++IK ++IL   D   KL DF L+  + D +        +G
Sbjct: 106 ELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT---MVG 159

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +    Y+ K D++S G+  + L  G+
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 51.2 bits (123), Expect = 6e-09
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 9/101 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           I  AL YL       ++ +++K S+IL D     KL DF ++  + D +   + A   G 
Sbjct: 123 IVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA---GC 177

Query: 63  MGFVATEYVT----TGDYNEKCDVFSFGVLLLVLLTGQKLY 99
             ++A E +        Y+ + DV+S G+ L+ L TGQ  Y
Sbjct: 178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPY 218

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 51.2 bits (123), Expect = 7e-09
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI   L +LH    R I+++++KL ++L D +   K+ DF +  E I  G T    +   
Sbjct: 104 EIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSID 102
           G   ++A E ++   Y    D ++ GVLL  +L GQ  +  D
Sbjct: 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 51.3 bits (123), Expect = 7e-09
 Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + I+++++KL ++L D+D   K+ DF + +   +GE   K +   G
Sbjct: 104 EIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--KASTFCG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +    YNE  D +SFGVLL  +L GQ
Sbjct: 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 49.8 bits (119), Expect = 2e-08
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL +LH      I++++IKL +IL D +    L DF L++     E     +   G
Sbjct: 113 EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSF-CG 168

Query: 62  IMGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTGQKLYSID 102
            + ++A E +  G   +++  D +S GVL   LLTG   +++D
Sbjct: 169 TIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 50.0 bits (119), Expect = 2e-08
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + IV++++KL +IL D D   K+ DF + +    G+   K     G
Sbjct: 104 EIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTCTFCG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK-LYSIDE 103
              ++A E +    YN   D +SFGVLL  +L GQ   +  DE
Sbjct: 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE 201

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 48.7 bits (116), Expect = 5e-08
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L +LH    R IV++++K  ++L D+    ++ D  LA  +  G+  IK     G
Sbjct: 103 QIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK-IKGRA--G 156

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             G++A E +    Y+   D F+ G  L  ++ G+
Sbjct: 157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 48.5 bits (115), Expect = 6e-08
 Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 6/103 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL +LH      I++++IKL +IL D +    L DF L++   + E     +   G
Sbjct: 113 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSF-CG 168

Query: 62  IMGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTGQKLYSID 102
            + ++A + V  GD  +++  D +S GVL+  LLTG   +++D
Sbjct: 169 TIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 47.9 bits (115), Expect = 9e-08
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 9/92 (9%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--- 57
           ++IA  + YL     +  V +++   + L  E+ V K+ DF L+  I + + + K     
Sbjct: 109 LQIAKGMEYLE---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGK 165

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           +PI  M   A E +  G +  K DV+SFGVLL
Sbjct: 166 LPIKWM---APESLKDGKFTSKSDVWSFGVLL 194

Length = 258

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 48.1 bits (114), Expect = 9e-08
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L  LH      IV++++K  +IL D+    ++ D  LA  +P+G+T IK    +G
Sbjct: 110 EICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR--VG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            +G++A E V    Y    D ++ G LL  ++ GQ
Sbjct: 164 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 103 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +   DY    D +  GV++  ++ G+
Sbjct: 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 47.7 bits (113), Expect = 1e-07
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 156

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +   DY    D +  GV++  ++ G+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +  A  YLH    R I+++++K  ++L D +   KL DF  A+ +  G+   K     G 
Sbjct: 102 VVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGT 155

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
             +VA E +    Y+   D +S G+LL  LLTG+  +  D+
Sbjct: 156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 21/122 (17%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--- 57
           ++IAN + YL     +  + +++   +IL   D   K+ DF L  ++P  E H       
Sbjct: 104 VQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160

Query: 58  -IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL----------LVLLTG-QKLYSIDEAG 105
            +P       A E + T  ++   DV+ FGV L             L+G Q L  ID+ G
Sbjct: 161 KVPFAWC---APESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG 217

Query: 106 DR 107
           +R
Sbjct: 218 ER 219

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 47.3 bits (112), Expect = 1e-07
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L ++H  F   +V++++K ++IL DE    ++ D  LA      + H      +G
Sbjct: 105 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VG 157

Query: 62  IMGFVATEYVTTGD-YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRH 108
             G++A E +  G  Y+   D FS G +L  LL G   +   +  D+H
Sbjct: 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 46.6 bits (110), Expect = 3e-07
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 7/106 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI+ AL YLH    R I+++++KL ++L D +   KL D+ +  E +  G+T    +   
Sbjct: 104 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
           G   ++A E +   DY    D ++ GVL+  ++ G+  + I  + D
Sbjct: 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD 203

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 46.7 bits (111), Expect = 3e-07
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 7/95 (7%)

Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           E+A AL +LH +G    I+++++K  +IL DE+   KL DF L++   D E   K     
Sbjct: 106 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFC 159

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           G + ++A E V    + +  D +SFGVL+  +LTG
Sbjct: 160 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 46.3 bits (110), Expect = 4e-07
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EIA  L +LH    + I+++++KL +++ D +   K+ DF +  E+I  G+T        
Sbjct: 109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT---TRTFC 162

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +    Y +  D ++FGVLL  +L GQ
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH G    IV++++KL +++ D+D   K+ DF L  E I D  T        
Sbjct: 103 EIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM---KTFC 156

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +   DY    D +  GV++  ++ G+
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 4e-07
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 9/101 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--THIKDAIP 59
           +IA  +AYL     R  + +++   +IL  E+ V K+ DF LA  I D E         P
Sbjct: 111 QIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFP 167

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLY 99
           I    + A E    G +  K DV+SFG+LL  ++T G+  Y
Sbjct: 168 IK---WTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 46.2 bits (109), Expect = 4e-07
 Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 4/93 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL     V K+ DF LA  I D E   ++     
Sbjct: 110 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           I  + A E +  G +  K DV+SFG+LL+ ++T
Sbjct: 167 IK-WTAPEAINFGSFTIKSDVWSFGILLMEIVT 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 45.7 bits (108), Expect = 6e-07
 Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L ++H  F   +V++++K ++IL DE    ++ D  LA      + H      +G
Sbjct: 105 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VG 157

Query: 62  IMGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRH 108
             G++A E +  G  Y+   D FS G +L  LL G   +   +  D+H
Sbjct: 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 205

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 45.5 bits (108), Expect = 6e-07
 Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++   + YL     +  V +++   ++L  ED VAK+ DF LA+    G+   K  +P+
Sbjct: 109 LDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK--LPV 163

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
               + A E +    ++ K DV+SFG+LL
Sbjct: 164 ---KWTAPEALREKKFSTKSDVWSFGILL 189

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.5 bits (108), Expect = 7e-07
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA-IPI 60
           ++A  +AYL     +  + +++   +IL  ED V K+ DF LA  I +      D  IP 
Sbjct: 112 QVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPY 168

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLY 99
               + A E  + G ++ K DV+SFG+LL  + T GQ  Y
Sbjct: 169 K---WTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPY 205

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 7e-07
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LAYLH    + ++ ++IK ++IL  +D V KL DF +A  + D      DA  +G
Sbjct: 107 QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLND--VSKDDASVVG 161

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E +     +   D++S G  ++ LLTG   Y
Sbjct: 162 TPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPY 199

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 45.4 bits (107), Expect = 9e-07
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI  AL +LH    R I+++++KL ++L D D   KL D+ +  E +  G+T    +   
Sbjct: 104 EICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSI 101
           G   ++A E +   +Y    D ++ GVL+  ++ G+  + I
Sbjct: 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 6/64 (9%)

Query: 29  LFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           L  E++V K+ DF ++     G   + D    IPI    + A E +  G Y  + DV+S+
Sbjct: 125 LVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK---WTAPEALNYGRYTSESDVWSY 181

Query: 86  GVLL 89
           G+LL
Sbjct: 182 GILL 185

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 45.2 bits (107), Expect = 1e-06
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 8/103 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH      +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 156

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ-KLYSID 102
           G   ++A E +   DY    D +  GV++  ++ G+   Y+ D
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 45.1 bits (106), Expect = 1e-06
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 109 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E +    Y+ K D++S G+  + L  G+  +S
Sbjct: 164 TPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHS 202

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +AY+     +  + ++++ +++L  E  + K+ DF LA  I D E   ++     
Sbjct: 111 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 167

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
           I  + A E +  G +  K DV+SFG+LL  ++T  K+
Sbjct: 168 IK-WTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKI 203

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 110 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           I  + A E    G +  K DV+SFG+LL  L T
Sbjct: 167 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTT 198

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI+ AL +LH    R I+++++KL ++L D +   KL D+ +  E I  G+T    +   
Sbjct: 104 EISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSI 101
           G   ++A E +   DY    D ++ GVL+  ++ G+  + I
Sbjct: 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E +    Y+ K D++S G+  + L  G+   S
Sbjct: 164 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNS 202

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 5/88 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D D   ++ D  LA  + DG++  K     G
Sbjct: 105 QIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY--AG 159

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLL 89
             GF+A E +   +Y+   D F+ GV L
Sbjct: 160 TPGFMAPELLQGEEYDFSVDYFALGVTL 187

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L  LH       V++++K  +IL D+    ++ D  LA  IP+GE+ I+    +G
Sbjct: 110 EILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES-IRGR--VG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            +G++A E +    Y    D +  G L+  ++ GQ
Sbjct: 164 TVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 44.5 bits (105), Expect = 2e-06
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL +LH    + I+++++KL ++L D +   KL DF +  E I +G+T    +   
Sbjct: 104 EITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +    Y    D ++ GVLL  +L G 
Sbjct: 158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGH 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 44.3 bits (104), Expect = 2e-06
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 109 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +    Y+ K D++S G+  + L  G+
Sbjct: 164 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 19/94 (20%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   L+YLH    R I+ ++IK S+IL       KL DF ++     GE      +    
Sbjct: 114 VLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVS-----GE-----LVNSLA 160

Query: 63  MGFVATEY------VTTGDYNEKCDVFSFGVLLL 90
             F  T +      +    Y+   DV+S G+ LL
Sbjct: 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLL 194

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 15/103 (14%)

Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE--------SIPDGET 52
           EI  AL YLH  G    I+ +++K  +IL D +   KL DF L++        ++ D E 
Sbjct: 101 EIVLALEYLHSNG----IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156

Query: 53  HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
             K  +  G   ++A E +    +++  D +S G +L   L G
Sbjct: 157 EDKRIV--GTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 27/121 (22%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++  A+AY H      I+ ++IK  +IL  E  V KL DF  A ++              
Sbjct: 108 QLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS-------- 156

Query: 62  IMGFVATEYVTT----------GD--YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHW 109
                 T+YV T          GD  Y +  DV++ G ++  LL G+ L+  D   D+ +
Sbjct: 157 ----PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLY 212

Query: 110 L 110
           L
Sbjct: 213 L 213

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 44.3 bits (105), Expect = 2e-06
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG--ETHIKDAIP 59
           E+   L YLH       + ++IK  +IL  ED   K+ DF ++ S+ DG   T       
Sbjct: 110 EVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTF 166

Query: 60  IGIMGFVATEYVTTGD-YNEKCDVFSFGVLLLVLLTGQKLYS 100
           +G   ++A E +     Y+ K D++SFG+  + L TG   YS
Sbjct: 167 VGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS 208

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A  + YL     + +V +++   +IL  ED VAK+ DF LA     G  + K  +P+
Sbjct: 107 LDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK--LPV 161

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
               + A E +    ++ K DV+S+GVLL
Sbjct: 162 ---KWTAPEALKHKKFSSKSDVWSYGVLL 187

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EIA  L +LH    + I+++++KL +++ D +   K+ DF +  E++ DG   +      
Sbjct: 109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---VTTKTFC 162

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +    Y +  D ++FGVLL  +L GQ
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 10/97 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK----DA 57
           +I   +AYLH    +  + +++   ++L D D + K+ DF LA+++P+G  + +      
Sbjct: 115 QICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 171

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
            P+    + A E +    ++   DV+SFGV L  LLT
Sbjct: 172 SPV---FWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.9 bits (104), Expect = 3e-06
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 10/102 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           +IA  ++YL     + +V +++   ++L       K+ DF LA+ +   E         +
Sbjct: 117 QIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV 173

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLY 99
           PI  M   A E +    Y  K DV+S+GV +  L+T G K Y
Sbjct: 174 PIKWM---ALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 43.9 bits (103), Expect = 3e-06
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        + ++++ ++IL  ++ V K+ DF LA  I D E   +      
Sbjct: 110 QIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           I  + A E    G +  K DV+SFG+LL  L+T
Sbjct: 167 IK-WTAPEAALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.7 bits (103), Expect = 3e-06
 Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     +  + ++++ ++IL  E    K+ DF LA  I D E   ++     
Sbjct: 110 QIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           I  + A E +  G +  K DV+SFG+LL  ++T
Sbjct: 167 IK-WTAPEAINYGTFTIKSDVWSFGILLTEIVT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 43.8 bits (103), Expect = 3e-06
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + I+++++KL +++ D D   K+ DF + +    G+   + +   G
Sbjct: 104 EIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN--RASTFCG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
              ++A E +    Y    D +SFGVLL  +L GQ  +  D+
Sbjct: 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD 200

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 43.7 bits (103), Expect = 3e-06
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I   ++  K +  +G
Sbjct: 123 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVG 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E VT   Y  K D++S G++ + ++ G+  Y
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 7   LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFV 66
           L YLH       + ++IK  +IL +E+  AKL DF ++  + D  T  K    IG   ++
Sbjct: 112 LEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD--TMAKRNTVIGTPFWM 166

Query: 67  ATEYVTTGDYNEKCDVFSFGV 87
           A E +    YN K D++S G+
Sbjct: 167 APEVIQEIGYNNKADIWSLGI 187

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 43.2 bits (101), Expect = 4e-06
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I   ++  K +  +G
Sbjct: 123 ECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVG 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E VT   Y  K D++S G++ + ++ G+  Y
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 43.4 bits (102), Expect = 4e-06
 Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 18  IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN 77
           IV++++K  +IL D+    ++ D  LA  IP+GET ++    +G +G++A E +    Y 
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET-VRGR--VGTVGYMAPEVINNEKYT 179

Query: 78  EKCDVFSFGVLLLVLLTGQ 96
              D +  G L+  ++ GQ
Sbjct: 180 FSPDWWGLGCLIYEMIQGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 16/103 (15%)

Query: 2   EIANALAYLHVG-FPRPIVF-KNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++  AL   H    P   V  +++K ++I  D ++  KL DF LA+ +    +  K    
Sbjct: 113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT--- 169

Query: 60  IGIMGFVATEY------VTTGDYNEKCDVFSFGVLLLVLLTGQ 96
                +V T Y      +    Y+EK D++S G L+  L    
Sbjct: 170 -----YVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGE-THIKDAIP 59
           EI+ AL +LH    + I+++++K  +IL D     KL DF L  ESI +G  TH      
Sbjct: 108 EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF---- 160

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G + ++A E +    + +  D +S G L+  +LTG 
Sbjct: 161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGA 197

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----KDA 57
           +I   + YL     +  + +++   +IL + + + K+ DF LA+ +P+ + +        
Sbjct: 117 QICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGE 173

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
            PI    + A E + T  ++   DV+SFGV L  L T
Sbjct: 174 SPIF---WYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 43.2 bits (102), Expect = 5e-06
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 6/104 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+  AL Y+H      ++ ++IK ++IL       KL DF +A  +    +  K +  +G
Sbjct: 109 EVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS--KRSTFVG 163

Query: 62  IMGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQKLYSIDEA 104
              ++A E +T G  Y+ K D++S G+ +  + TG   YS  +A
Sbjct: 164 TPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA 207

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 43.2 bits (101), Expect = 5e-06
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I   ++  K +  +G
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVG 178

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E VT   Y  K D++S G++ + ++ G+  Y
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 42.7 bits (100), Expect = 6e-06
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI+  L +LH    R I+++++KL +++ D +   K+ DF +  E + DG T        
Sbjct: 109 EISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT---TRTFC 162

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E +    Y +  D +++GVLL  +L GQ
Sbjct: 163 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 42.8 bits (101), Expect = 7e-06
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 11/99 (11%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-----THIK 55
           +++A  + YL     +  V +++   + + DE    K+ DF LA  I D E      H  
Sbjct: 105 LQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTG 161

Query: 56  DAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
             +P+  M   A E + T  +  K DV+SFGVLL  L+T
Sbjct: 162 AKLPVKWM---ALESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 42.5 bits (100), Expect = 9e-06
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L  LH      IV++++K  +IL D+    ++ D  LA  IP+GET I+    +G
Sbjct: 110 EITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET-IRGR--VG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            +G++A E V    Y    D +  G L+  ++ G+
Sbjct: 164 TVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 42.1 bits (99), Expect = 1e-05
 Identities = 27/105 (25%), Positives = 59/105 (56%), Gaps = 5/105 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LAYLH    + I+ +++K  ++L D D + K+ DF +++   D   + ++    G
Sbjct: 116 QVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQG 172

Query: 62  IMGFVATEYVTT--GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA 104
            + ++A E + +    Y+ K D++S G ++L +  G++ +S +EA
Sbjct: 173 SVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA 217

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 21/105 (20%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 128 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 175

Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGVLLLVLLTGQKLY 99
             G+VAT +    +       YN+  D++S G ++  LLTG+ L+
Sbjct: 176 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 218

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 41.7 bits (98), Expect = 1e-05
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 5/99 (5%)

Query: 7   LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFV 66
           LA+LH    + I+ ++IK  ++  D     K+ D  +A+ + D  T+  + I +G   ++
Sbjct: 114 LAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD-NTNFANTI-VGTPYYL 168

Query: 67  ATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG 105
           + E      YNEK DV++ GV+L    TG+  +  +  G
Sbjct: 169 SPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG 207

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 41.5 bits (97), Expect = 2e-05
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  +AY+        + ++++ ++IL  +  V K+ DF LA  I D E   +      
Sbjct: 110 QVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           I  + A E    G +  K DV+SFG+LL  L+T
Sbjct: 167 IK-WTAPEAALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 7/106 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           E+  AL +LH      ++++++KL +IL D +   KL DF +  E I +G T        
Sbjct: 104 EVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT---TTTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
           G   ++A E +   +Y    D ++ GVL+  ++ GQ  +  D   D
Sbjct: 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  ++L   D   KL DF     I   ++  K +  +G
Sbjct: 123 ECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--KRSTMVG 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E VT   Y  K D++S G++ + ++ G+  Y
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+   L YLH    + ++ ++IK  +IL  +D   KL DF  A  +   +   K    +G
Sbjct: 124 EVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL--TKEKSKRNSVVG 178

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +   DY  K D++S G++ + +  G+
Sbjct: 179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +  AL YLH    + ++ ++IK  SIL   D   KL DF     I       K  +  G 
Sbjct: 126 VLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV--GT 180

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSID 102
             ++A E ++   Y  + D++S G++++ ++ G+  Y  D
Sbjct: 181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD 220

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 40.3 bits (94), Expect = 5e-05
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 19/119 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK---DAI 58
           +I+  + YL       +V +++   ++L  E    K+ DF L+  + + ++++K     I
Sbjct: 135 QISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRI 191

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLL--LVLLTG--------QKLYSIDEAGDR 107
           P+  M   A E +    Y  + DV+SFGVLL  +V L G        ++L+++ + G R
Sbjct: 192 PVKWM---AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR 247

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 40.2 bits (94), Expect = 5e-05
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DAIP 59
           +I   L YLH    R I+ ++IK ++IL D     K+ DF +++ +       K   A P
Sbjct: 114 QILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARP 170

Query: 60  I--GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              G + ++A E V    Y  K D++S G L++ +LTG+  +
Sbjct: 171 SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPF 212

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 40.0 bits (93), Expect = 6e-05
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 13/103 (12%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF----SLAESIPDGETHIKD 56
           + +  AL+YLH    + ++ ++IK  SIL   D   KL DF     +++ +P      K 
Sbjct: 125 LSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------KR 175

Query: 57  AIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              +G   ++A E ++   Y  + D++S G++++ ++ G+  Y
Sbjct: 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 40.1 bits (94), Expect = 7e-05
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 6   ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPIGIMG 64
            L YLH      IV++++KL ++L D +   K+ DF L  E +  G+     +   G   
Sbjct: 113 GLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR---TSTFCGTPE 166

Query: 65  FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
           F+A E +T   Y    D +  GVL+  +L G+  +  D+
Sbjct: 167 FLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD 205

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 9e-05
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 16  RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DA-IPIGIMGFVATEYVT 72
           R  + +++   +IL  E++V K+ DF LA  I     +++  DA +P+  M   A E + 
Sbjct: 192 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM---APESIF 248

Query: 73  TGDYNEKCDVFSFGVLL 89
              Y  + DV+SFGVLL
Sbjct: 249 DKVYTTQSDVWSFGVLL 265

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 9e-05
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+   L YLH      I  ++IK ++IL  E+   KL DF ++  +    T  K    +G
Sbjct: 106 EVLLGLEYLHEE--GKI-HRDIKAANILLSEEGDVKLADFGVSGQL--TSTMSKRNTFVG 160

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E +    Y+EK D++S G+  + L  G+   S
Sbjct: 161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLS 199

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 19/106 (17%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L YLH    R  V ++IK ++IL D + V KL DF +A+        + +     
Sbjct: 110 QILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAK-------QVVEF--SF 157

Query: 62  IMGFVATEY-------VTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              F  + Y          G Y    D++S G  +L + TG+  +S
Sbjct: 158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWS 203

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 34/109 (31%), Positives = 59/109 (54%), Gaps = 9/109 (8%)

Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI  AL +LH +G    IV+++IKL +IL D +    L DF L++     E     +   
Sbjct: 113 EIILALEHLHKLG----IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSF-C 167

Query: 61  GIMGFVATEYV-TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRH 108
           G + ++A E +   G + +  D +S G+L+  LLTG   ++++  G+R+
Sbjct: 168 GTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE--GERN 214

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 6/77 (7%)

Query: 16  RPIVFKNIKLSSILFDEDHVAKLFDFSLAESI---PDGETHIKDAIPIGIMGFVATEYVT 72
           R  + +++   +IL  E++V K+ DF LA  I   PD        +P+  M   A E + 
Sbjct: 193 RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWM---APESIF 249

Query: 73  TGDYNEKCDVFSFGVLL 89
              Y  + DV+SFGVLL
Sbjct: 250 DKVYTTQSDVWSFGVLL 266

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 9/105 (8%)

Query: 1   MEIANALAYLH-VGF-PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA- 57
           +++A    YL  + F  R +  +N  +S   +D D V K+ DF LA  I   + + K+  
Sbjct: 113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGE 172

Query: 58  --IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLY 99
             +P+  M   A E +  G +  + DV+SFGVL+  +LT GQ+ Y
Sbjct: 173 GLLPVRWM---APESLLDGKFTTQSDVWSFGVLMWEILTLGQQPY 214

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 39.2 bits (91), Expect = 1e-04
 Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 5/99 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           + +  AL+ LH    + ++ ++IK  SIL   D   KL DF     +   E   + ++ +
Sbjct: 123 LAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV-SKEVPRRKSL-V 177

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
           G   ++A E ++   Y  + D++S G++++ ++ G+  Y
Sbjct: 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 9/94 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+   +  LH    R I+ ++IK  ++L D+    KL DF L+ +   G  + K    +G
Sbjct: 105 EVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRN---GLENKK---FVG 155

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
              ++A E +     ++  D +S G ++   L G
Sbjct: 156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 13/98 (13%)

Query: 6   ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF----SLAESIPDGETHIKDAIPIG 61
           AL++LH    + ++ ++IK  SIL   D   KL DF     +++ +P      +    +G
Sbjct: 127 ALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP------RRKSLVG 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E ++   Y  + D++S G++++ ++ G+  Y
Sbjct: 178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD---AI 58
           EIA+ +AYL     +  V +++   + +  ED   K+ DF +   I + + + K     +
Sbjct: 127 EIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           P+  M   A E +  G +  K DV+SFGV+L  + T
Sbjct: 184 PVRWM---APESLKDGVFTTKSDVWSFGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 21/105 (20%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      +V +++K S+IL +E+   K+ DF LA         I+D     
Sbjct: 116 QILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR--------IQDP---Q 161

Query: 62  IMGFVATEY-------VTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
           + G+V+T Y       +T   Y+ + D++S G +   +L G+ L+
Sbjct: 162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLF 206

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 7   LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL----AESIPD--GETHIKDAIPI 60
           LA  HV   + ++ ++IK ++IL   + + KL DF      A ++ D  G T        
Sbjct: 154 LAVHHV-HSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFC------ 206

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           G   +VA E      Y++K D+FS GVLL  LLT
Sbjct: 207 GTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240

Length = 496

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 8/99 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIP---DGETHIKDA 57
           ++   L+YLH      I+ +++K +++L D      ++ DF  A  +     G    +  
Sbjct: 111 QLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQ 167

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           + +G + F+A E +    Y   CDV+S G +++ + T +
Sbjct: 168 L-LGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 38.4 bits (89), Expect = 2e-04
 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   + +LH      IV++++K  ++L D+    +L D  LA  + DG+T  + A   G
Sbjct: 103 QITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA---G 156

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             G++A E +    Y+   D F+ G  +  ++ G+
Sbjct: 157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 25/106 (23%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA----ESIPDGETHIKDA 57
           ++  AL YLH    R I+ ++IK  +I    + + KL DF ++     ++   +T     
Sbjct: 111 QLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT----- 162

Query: 58  IPIGIMGFVATEY-----VTTGD-YNEKCDVFSFGVLLLVLLTGQK 97
                   V T Y     +     YN K D++S G +L  L T + 
Sbjct: 163 -------VVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           ++A  + YL     +  + +++   ++L  ED+V K+ DF LA  I   + + K     +
Sbjct: 148 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL 204

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           P+  M   A E +    Y  + DV+SFGVLL  + T
Sbjct: 205 PVKWM---APEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 12/108 (11%)

Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           E+  A+  +H +G+    V ++IK  ++L D     KL DF  A  +      +   +P+
Sbjct: 110 ELVLAIHSVHQMGY----VHRDIKPENVLIDRTGHIKLADFGSAARL-TANKMVNSKLPV 164

Query: 61  GIMGFVATEYVTT------GDYNEKCDVFSFGVLLLVLLTGQKLYSID 102
           G   ++A E +TT      G Y  +CD +S GV+   ++ G+  +   
Sbjct: 165 GTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG 212

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 23/107 (21%)

Query: 5   NALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMG 64
            AL Y+H G    ++ +++K S+IL + D   KL DF LA S+    + +++     ++ 
Sbjct: 118 KALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL----SELEENPENPVL- 169

Query: 65  FVATEYVTT------------GDYNEKCDVFSFGVLLLVLLTGQKLY 99
              T+YV T              Y +  D++S G +L  +L G+ L+
Sbjct: 170 ---TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLF 213

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIP 59
           ++IA  + YL       +V +N+   +IL   D + ++ DF +A+ + PD + +      
Sbjct: 116 VQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHK 172

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLYS 100
             I  ++A E +  G Y  + DV+S+GV +  +++ G + Y+
Sbjct: 173 TPIK-WMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYA 213

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           ++A  + YL     R  + +++   ++L  ED+V K+ DF LA  + D + + K +   +
Sbjct: 142 QVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRL 198

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           P+  M   A E +    Y  + DV+SFG+L+  + T
Sbjct: 199 PVKWM---APEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL YLH    + IV++++K  +IL D++   KL DF  A+ + D     +     G
Sbjct: 109 EIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-----RTWTLCG 160

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
              ++A E + +  +N+  D ++ G+L+  +L G
Sbjct: 161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.0 bits (88), Expect = 3e-04
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 8/89 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++  A+ YL        V +++   ++L  ED+VAK+ DF L +     +   K  +P+
Sbjct: 109 LDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK--LPV 163

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
               + A E +    ++ K DV+SFG+LL
Sbjct: 164 ---KWTAPEALREKKFSTKSDVWSFGILL 189

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 21/113 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L Y+H      I+ +++K S++  +ED   ++ DF LA    D  T         
Sbjct: 126 QLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMT--------- 173

Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDR 107
             G+VAT +    +       YN+  D++S G ++  LL G+ L+  ++  D+
Sbjct: 174 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ 224

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 7   LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFV 66
           LAYLH       + ++IK ++IL  ED   KL DF ++  +    T  K    IG   ++
Sbjct: 114 LAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQL--TATIAKRKSFIGTPYWM 168

Query: 67  ATEYV---TTGDYNEKCDVFSFGVLLLVLLTGQ 96
           A E       G Y+ KCD+++ G+  + L   Q
Sbjct: 169 APEVAAVERKGGYDGKCDIWALGITAIELAELQ 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 37.9 bits (88), Expect = 4e-04
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIPIG 61
           IA AL +LH      +V  N+    I+ D      L   SL   +  D +  I  A    
Sbjct: 789 IAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSA---- 843

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              +VA E   T D  EK D++ FG++L+ LLTG+
Sbjct: 844 ---YVAPETRETKDITEKSDIYGFGLILIELLTGK 875

Length = 968

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YL     +  + +++   ++L  E+  +K+ DF L+      E ++K  +   
Sbjct: 127 DVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRG---EEVYVKKTMGRL 180

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLL 89
            + ++A E +    Y  K DV+SFGVLL
Sbjct: 181 PVRWMAIESLNYSVYTTKSDVWSFGVLL 208

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 37.7 bits (87), Expect = 4e-04
 Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EIA+ +AYL+       V +++   + +  ED   K+ DF +   I + + + K    + 
Sbjct: 127 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
            + +++ E +  G +    DV+SFGV+L  + T
Sbjct: 184 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 216

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 21/113 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF---------SLAESIPDGET 52
           EI  AL YLH    + I+ +++K  +IL D+D   K+ DF         S  ES     T
Sbjct: 110 EILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDAT 166

Query: 53  HIKDAIPI---------GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           +I   I           G   +V+ E +      +  D+++ G ++  +LTG+
Sbjct: 167 NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I +A++Y+H      I+ ++IK  +I   +  + KL DF +++ +    +  +  +  G
Sbjct: 109 QIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVV--G 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              +++ E      YN K D+++ G +L  LLT ++ +
Sbjct: 164 TPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTF 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 9/91 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DA-I 58
           ++A  + +L     R  + +++   +IL  E++V K+ DF LA  I     +++  DA +
Sbjct: 187 QVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           P+  M   A E +    Y  + DV+SFGVLL
Sbjct: 244 PLKWM---APETIFDRVYTIQSDVWSFGVLL 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 37.3 bits (87), Expect = 5e-04
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 10/101 (9%)

Query: 6   ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMG- 64
            LAYLH      IV ++IK ++I  D + V KL DF  A  + +  T + + +   + G 
Sbjct: 111 GLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQ-SLAGT 166

Query: 65  --FVATEYVTTGDYNEK---CDVFSFGVLLLVLLTGQKLYS 100
             ++A E +T G         D++S G ++L + TG++ +S
Sbjct: 167 PAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWS 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           ++A  + YL     +  + +++   ++L  ED+V K+ DF LA  + + + + K     +
Sbjct: 142 QVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRL 198

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           P+  M   A E +    Y  + DV+SFGVLL  + T
Sbjct: 199 PVKWM---APEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 37.1 bits (86), Expect = 6e-04
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + +AYLH    R IV ++IK S++L +     K+ DF ++  +   +T       +G
Sbjct: 176 QILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL--AQTMDPCNSSVG 230

Query: 62  IMGFVATEYVTTGDYNEKC------DVFSFGVLLLVLLTGQKLYSIDEAGD 106
            + +++ E + T D N         D++S GV +L    G+  + +   GD
Sbjct: 231 TIAYMSPERINT-DLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD 280

Length = 353

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 37.4 bits (87), Expect = 6e-04
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 20/108 (18%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------ESIPDGET 52
           ++IA  ++YLH    R ++ K+I   + + DE+   K+ D +L+          + D E 
Sbjct: 124 IQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNEN 180

Query: 53  HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLY 99
                 P+  M   A E +   +Y+   DV+SFGVLL  L+T GQ  Y
Sbjct: 181 R-----PVKWM---ALESLVNKEYSSASDVWSFGVLLWELMTLGQTPY 220

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 37.1 bits (86), Expect = 7e-04
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 10/91 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           +I++A+ YL     +  + +++   + L  E+H+ K+ DF L+  +  G+T+   A    
Sbjct: 112 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKF 167

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           PI    + A E +    ++ K DV++FGVLL
Sbjct: 168 PIK---WTAPESLAYNKFSIKSDVWAFGVLL 195

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 36.9 bits (85), Expect = 7e-04
 Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EIA+ +AYL+    +  V +++   + +   D   K+ DF +   I + + + K    + 
Sbjct: 127 EIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLL 89
            + ++A E +  G +    D++SFGV+L
Sbjct: 184 PVRWMAPESLKDGVFTTSSDMWSFGVVL 211

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YL     +  + +++   +IL  E++VAK+ DF L+      E ++K  +   
Sbjct: 132 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMGRL 185

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLL 89
            + ++A E +    Y    DV+S+GVLL
Sbjct: 186 PVRWMAIESLNYSVYTTNSDVWSYGVLL 213

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 37.0 bits (85), Expect = 8e-04
 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YL     +  + +++   +IL  E++VAK+ DF L+      E ++K  +   
Sbjct: 120 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVYVKKTMGRL 173

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLL 89
            + ++A E +    Y    DV+S+GVLL
Sbjct: 174 PVRWMAIESLNYSVYTTNSDVWSYGVLL 201

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 36.9 bits (85), Expect = 8e-04
 Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG---ETHIKDA 57
           ++ A  +AYL     +  + +++   + L  E++V K+ DF ++    DG    + +K  
Sbjct: 100 LDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ- 155

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           IPI    + A E +  G Y+ + DV+S+G+LL
Sbjct: 156 IPIK---WTAPEALNYGRYSSESDVWSYGILL 184

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 8/81 (9%)

Query: 18  IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGD 75
           I+ ++IK S+IL +     KL DF ++     GE    I D   +G   +++ E +  G 
Sbjct: 125 IMHRDIKPSNILVNSRGQIKLCDFGVS-----GELINSIADTF-VGTSTYMSPERIQGGK 178

Query: 76  YNEKCDVFSFGVLLLVLLTGQ 96
           Y  K DV+S G+ ++ L  G+
Sbjct: 179 YTVKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+  A  YLH    + I+++++K  ++L D     K+ DF  A+ +PD     +     G
Sbjct: 126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-----RTFTLCG 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
              ++A E + +  + +  D ++ GVLL   + G
Sbjct: 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG 211

Length = 329

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 16/101 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L YLH    R I+ ++IK S++L +     K+ DF +++ + +            
Sbjct: 107 QILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD--------Q 156

Query: 62  IMGFVAT------EYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              FV T      E +    Y+   D++S G+ LL    G+
Sbjct: 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 4/99 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ + YL     +  + +++   + + +E+    + DF L++ I +G+ + +  I   
Sbjct: 120 DIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKM 176

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT-GQKLY 99
            + ++A E +    Y  K DV+SFGV +  + T GQ  Y
Sbjct: 177 PVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPY 215

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIP 59
           ++I+  L ++H    R I+ ++IK  +I   ++  VAKL DF +A  + D        + 
Sbjct: 108 VQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCV- 163

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
            G   +++ E      YN K D++S G +L  L T
Sbjct: 164 -GTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESI-PDGETHIKDAIP 59
           EIA+AL YLH      IV++++K  +IL D      L DF L  E+I  +G T      P
Sbjct: 104 EIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP 160

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
                ++A E +    Y+   D +  G +L  +L G
Sbjct: 161 ----EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 36.2 bits (83), Expect = 0.001
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 8/89 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E    LAYLH    +  + ++IK ++IL  ++   KL DF +A  I    T  K    IG
Sbjct: 114 ETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT--ATIAKRKSFIG 168

Query: 62  IMGFVATEYVT---TGDYNEKCDVFSFGV 87
              ++A E       G YN+ CD+++ G+
Sbjct: 169 TPYWMAPEVAAVEKNGGYNQLCDIWAVGI 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 28/113 (24%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   + + H      I+ ++IK  +IL  +  V KL DF  A ++         A P  
Sbjct: 108 QILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTL---------AAP-- 153

Query: 62  IMGFVATEYVTT----------GD--YNEKCDVFSFGVLLLVLLTGQKLYSID 102
             G V T+YV T          GD  Y    D+++ G L+  +LTG+ L+  D
Sbjct: 154 --GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 35.9 bits (83), Expect = 0.002
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG--ETHIKDAIP 59
           ++A+ +AYL     +  + +++   ++L  E+++ K+ DF LA  I +   E       P
Sbjct: 111 QVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFP 167

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           I    + A E      ++ K DV+SFG+LL  ++T
Sbjct: 168 IK---WTAPEAALYNRFSIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 35.8 bits (82), Expect = 0.002
 Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           ++A  + YL     +  + +++   ++L  E++V K+ DF LA  + + + + K     +
Sbjct: 145 QVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRL 201

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           P+  M   A E +    Y  + DV+SFGVL+  + T
Sbjct: 202 PVKWM---APEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 35.6 bits (82), Expect = 0.002
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++  AL YLH    + IV +++  ++I+  ED    + DF LA+     E+ +   +  
Sbjct: 120 VQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ-KQPESKLTSVV-- 174

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           G + +   E V    Y EK DV++FG +L
Sbjct: 175 GTILYSCPEIVKNEPYGEKADVWAFGCIL 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 35.3 bits (81), Expect = 0.003
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)

Query: 19  VFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI--MGFVATEYVTTGDY 76
           V +++   ++L    H AK+ DF L++++   E + K A   G   + + A E +    +
Sbjct: 117 VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK-AKTHGKWPVKWYAPECMNYYKF 175

Query: 77  NEKCDVFSFGVLLLVLLT-GQKLY 99
           + K DV+SFGVL+    + GQK Y
Sbjct: 176 SSKSDVWSFGVLMWEAFSYGQKPY 199

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 6/70 (8%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L  EDHV K+ DF LA  I   + + K     +P+  M   A E +    Y  + DV+S
Sbjct: 163 VLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWM---APEALFDRVYTHQSDVWS 219

Query: 85  FGVLLLVLLT 94
           FGVLL  + T
Sbjct: 220 FGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 8/105 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EIA+AL YLH      I+++++K  +IL D      L DF L  E I   +T    +   
Sbjct: 104 EIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG-QKLYSIDEA 104
           G   ++A E +    Y+   D +  G +L  +L G    YS D A
Sbjct: 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA 202

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 34.7 bits (79), Expect = 0.004
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 8/106 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA---ESIPDGETHIKDAI 58
           +I   ++YLH      IV ++IK ++IL D     KL DF  +   ++I    T I+   
Sbjct: 114 QILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVT 170

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA 104
             G   +++ E ++   Y  K DV+S G  ++ +LT +  ++  EA
Sbjct: 171 --GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA 214

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 34.9 bits (80), Expect = 0.004
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAI 58
           ++I   + YL     R  V +++   ++L + +H  K+ DF L ++I   + +  +KD +
Sbjct: 116 VQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDL 172

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
              +  + A E +    +    DV+SFGV L  LLT
Sbjct: 173 DSPVFWY-APECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA---ESIPDGETHIKDAI 58
           +I   + YLH      IV ++IK ++IL D     KL DF  +   ++I    T +K   
Sbjct: 112 QILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSV- 167

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
             G   +++ E ++   Y  K DV+S G  ++ +LT
Sbjct: 168 -TGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	110
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.97
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.96
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.96
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.96
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
KOG0578	550	consensus p21-activated serine/threonine protein k	99.96
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.96
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.96
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.95
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.95
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.95
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.95
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.95
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.95
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.95
KOG0605	550	consensus NDR and related serine/threonine kinases	99.95
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.95
KOG0198	313	consensus MEKK and related serine/threonine protei	99.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.94
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.94
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.94
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.94
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
PTZ00284	467	protein kinase; Provisional	99.94
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.94
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.94
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.94
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.93
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.93
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.93
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.93
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.93
PHA03207	392	serine/threonine kinase US3; Provisional	99.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.93
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.93
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.93
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.93
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.93
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.93
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.93
PTZ00036	440	glycogen synthase kinase; Provisional	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.93
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.93
PHA03212	391	serine/threonine kinase US3; Provisional	99.93
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.93
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.93
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.93
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.93
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.93
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.93
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.93
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.93
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.93
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.93
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.92
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.92
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.92
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.92
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.92
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.92
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.92
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.92
PHA03210	501	serine/threonine kinase US3; Provisional	99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.92
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.92
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.92
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.92
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.92
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.92
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.92
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.92
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.92
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.92
KOG0589	426	consensus Serine/threonine protein kinase [General	99.92
PHA03211	461	serine/threonine kinase US3; Provisional	99.92
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.92
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.92
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.92
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.92
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.91
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.91
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.91
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.91
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.91
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.91
PHA02988	283	hypothetical protein; Provisional	99.91
KOG0610	459	consensus Putative serine/threonine protein kinase	99.91
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.91
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.91
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.91
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.91
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.91
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.91
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.91
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.91
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.9
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.9
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.9
PHA03209	357	serine/threonine kinase US3; Provisional	99.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.9
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.9
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.9
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.9
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.9
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.9
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.9
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.9
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.9
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.9
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.9
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.9
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.9
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.9
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.9
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.9
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.9
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.9
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.9
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.9
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.9
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.9
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.9
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.9
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.9
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.9
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.9
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.9
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.9
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.9
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.9
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.9
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.9
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.9
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.9
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.9
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.9
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.89
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.89
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.89
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.89
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.89
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.89
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.89
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.89
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.89
KOG0584	632	consensus Serine/threonine protein kinase [General	99.89
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.89
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.89
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.89
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.89
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.89
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.89
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.89
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.89
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.89
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.89
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.89
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.89
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.89
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.89
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.89
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.89
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.89
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.89
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.89
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.89
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.89
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.89
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.89
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.89
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.89
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.89
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.89
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.89
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.89
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.89
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.89
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.89
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.89
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.89
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.89
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.89
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.88
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.88
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.88
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.88
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.88
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.88
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.88
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.88
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.88
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.88
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.88
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.88
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.88
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.88
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.88
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.88
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.88
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.88
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.88
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.88
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.88
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.88
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.88
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.88
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.88
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.88
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.88
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.88
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.88
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.88
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.88
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.88
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.88
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.88
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.88
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.88
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.88
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.88
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.88
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.88
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.88
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.88
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.88
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.88
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.88
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.87
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.87
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.87
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.87
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.87
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.87
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.87
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.87
PLN00009	294	cyclin-dependent kinase A; Provisional	99.87
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.87
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.87
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.87
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.87
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.87
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.87
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.87
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.87
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.87
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.87
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.87
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.87
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.87
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.87
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.87
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.87
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.87
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.87
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.87
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.87
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.87
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.87
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.87
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.87
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.87
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.87
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.87
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.87
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.87
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.87
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.87
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.86
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.86
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.86
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.86
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.86
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.86
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.86
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.86
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.86
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.86
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.86
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.86
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.86
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.86
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.86
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.86
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.86
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.86
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.86
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.86
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.86
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.86
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.86
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.86
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.86
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.86
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.86
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.85
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.85
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.85
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.85
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.85
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.85
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.85
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.85
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.85
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.85
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.85
KOG3653	534	consensus Transforming growth factor beta/activin	99.85
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.85
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.85
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.85
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.85
KOG0586	596	consensus Serine/threonine protein kinase [General	99.85
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.84
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.84
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.84
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.83
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.83
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.83
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.82
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.82
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.8
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.8
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.79
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.79
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.79
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.78
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.78
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.78
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.78
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.74
KOG1152	772	consensus Signal transduction serine/threonine kin	99.73
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.72
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.68
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.68
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.64
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.62
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.6
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.59
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.59
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.58
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.58
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.52
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.52
PRK12274	218	serine/threonine protein kinase; Provisional	99.5
PRK09188	365	serine/threonine protein kinase; Provisional	99.48
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.43
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.42
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.38
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.31
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.28
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.25
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.25
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.24
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.22
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.21
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.08
smart00090	237	RIO RIO-like kinase.	99.03
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.0
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.87
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.85
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.84
PRK10345	210	hypothetical protein; Provisional	98.82
COG4248	637	Uncharacterized protein with protein kinase and he	98.79
PRK14879	211	serine/threonine protein kinase; Provisional	98.77
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.77
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.72
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.64
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.45
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.44
KOG1243	690	consensus Protein kinase [General function predict	98.44
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.39
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.18
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.17
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.11
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.09
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.06
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.06
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.9
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.77
PRK09902	216	hypothetical protein; Provisional	97.72
KOG3087	229	consensus Serine/threonine protein kinase [General	97.71
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.55
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.52
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.03
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.99
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.81
PRK05231	319	homoserine kinase; Provisional	96.74
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.44
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	96.38
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.35
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.32
PF01636	239	APH: Phosphotransferase enzyme family This family	96.32
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.3
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.3
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.16
COG2334	331	Putative homoserine kinase type II (protein kinase	96.09
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.03
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.94
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.85
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.8
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.73
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.67
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	95.62
PRK10271	188	thiK thiamine kinase; Provisional	95.53
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	95.3
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.21
PLN02236	344	choline kinase	94.9
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	94.74
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.61
PRK09550	401	mtnK methylthioribose kinase; Reviewed	94.56
PRK06148	1013	hypothetical protein; Provisional	94.47
PRK11768	325	serine/threonine protein kinase; Provisional	94.2
COG0661	517	AarF Predicted unusual protein kinase [General fun	93.92
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	93.62
PRK06149	972	hypothetical protein; Provisional	93.53
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	93.39
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	93.29
KOG2268	465	consensus Serine/threonine protein kinase [Signal	93.21
KOG0576	829	consensus Mitogen-activated protein kinase kinase	93.2
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	93.12
PHA03111	444	Ser/Thr kinase; Provisional	92.68
PRK12396	409	5-methylribose kinase; Reviewed	92.09
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	91.99
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	91.96
PLN02876	822	acyl-CoA dehydrogenase	91.55
PLN02756	418	S-methyl-5-thioribose kinase	91.34
PRK10593	297	hypothetical protein; Provisional	89.48
KOG1235	538	consensus Predicted unusual protein kinase [Genera	89.48
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	88.4
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	85.03

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=171.04  Aligned_cols=99  Identities=30%  Similarity=0.499  Sum_probs=87.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +|+.||.|||   +.+|+|||+||+|||++.+|.+++.|||+++.........  .+.+||+.|||||++....++.++|
T Consensus       133 Ei~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t--~tfcGT~eYmAPEil~~~gy~~~vD  207 (357)
T KOG0598|consen  133 EIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDAT--RTFCGTPEYMAPEILLGKGYDKAVD  207 (357)
T ss_pred             HHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCcc--ccccCCccccChHHHhcCCCCcccc
Confidence            6889999999   8999999999999999999999999999998654332222  2347999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .||+|+++|||++|.+||.+.+..
T Consensus       208 WWsLGillYeML~G~pPF~~~~~~  231 (357)
T KOG0598|consen  208 WWSLGILLYEMLTGKPPFYAEDVK  231 (357)
T ss_pred             hHhHHHHHHHHhhCCCCCcCccHH
Confidence            999999999999999999887643

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=6.2e-31  Score=161.36  Aligned_cols=96  Identities=28%  Similarity=0.497  Sum_probs=88.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|++|||   +..+++||+||.||++|++|.+|+.|||+++.....     ..+.+|||.|+|||++...++...+|
T Consensus       152 eivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavD  223 (355)
T KOG0616|consen  152 EIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVD  223 (355)
T ss_pred             HHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchh
Confidence            7889999999   899999999999999999999999999999876543     45668999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .|+||+++|||+.|.+||-.+++.
T Consensus       224 WWalGVLIYEMlaG~pPF~~~~~~  247 (355)
T KOG0616|consen  224 WWALGVLIYEMLAGYPPFYDDNPI  247 (355)
T ss_pred             HHHHHHHHHHHHcCCCCCcCCChH
Confidence            999999999999999999888763

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.97  E-value=3.8e-31  Score=165.65  Aligned_cols=95  Identities=26%  Similarity=0.481  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ++++||.|||.  +++||||||||.|+|+.+.|.+|++|||++......    ...+..||..||+||.+.+..|+.++|
T Consensus       186 ~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sD  259 (364)
T KOG0581|consen  186 AVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSD  259 (364)
T ss_pred             HHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccc
Confidence            67899999994  489999999999999999999999999998766443    223447999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||||+.++|+..|+.||...
T Consensus       260 IWSLGLsllE~a~GrfP~~~~  280 (364)
T KOG0581|consen  260 IWSLGLSLLELAIGRFPYPPP  280 (364)
T ss_pred             eecccHHHHHHhhCCCCCCCc
Confidence            999999999999999999875

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.1e-30  Score=159.75  Aligned_cols=100  Identities=25%  Similarity=0.362  Sum_probs=86.4

Q ss_pred             CcHHHHHHHHhcCCCCC--eEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            1 MEIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      +|++.|+..||+. -.+  ++||||||.||+++.+|.+|++|||+++.+....+..  ....|||.||+||.+...+++.
T Consensus       131 ~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA--~S~VGTPyYMSPE~i~~~~Y~~  207 (375)
T KOG0591|consen  131 VQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFA--HSLVGTPYYMSPERIHESGYNF  207 (375)
T ss_pred             HHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHH--HhhcCCCcccCHHHHhcCCCCc
Confidence            4889999999941 034  9999999999999999999999999998765533322  3447999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+||++|||..-+.||.+++
T Consensus       208 kSDiWslGCllyEMcaL~~PF~g~n  232 (375)
T KOG0591|consen  208 KSDIWSLGCLLYEMCALQSPFYGDN  232 (375)
T ss_pred             chhHHHHHHHHHHHHhcCCCccccc
Confidence            9999999999999999999999874

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=172.53  Aligned_cols=101  Identities=27%  Similarity=0.477  Sum_probs=90.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +++.||.|||   +++||+||||-+||++|.+|.+|++|||+|+......  .+..+.+||+.|||||++....|+..+|
T Consensus       476 ev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g--~~TsTfCGTpey~aPEil~e~~Yt~aVD  550 (694)
T KOG0694|consen  476 EVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG--DRTSTFCGTPEFLAPEVLTEQSYTRAVD  550 (694)
T ss_pred             HHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCCCC--CccccccCChhhcChhhhccCcccchhh
Confidence            5788999999   8999999999999999999999999999998654221  2445668999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      .|+||+++|||+.|+.||++++..+.
T Consensus       551 WW~lGVLlyeML~Gq~PF~gddEee~  576 (694)
T KOG0694|consen  551 WWGLGVLLYEMLVGESPFPGDDEEEV  576 (694)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence            99999999999999999999876553

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-30  Score=168.57  Aligned_cols=100  Identities=26%  Similarity=0.486  Sum_probs=87.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-----------eecccccccccccccce
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-----------IKDAIPIGIMGFVATEY   70 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~~pe~   70 (110)
                      ||+.|++|||   ++|||||||||+|||++.++++++.|||-++.++.....           .+.....||..|.+||+
T Consensus       182 eIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPEl  258 (604)
T KOG0592|consen  182 EILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPEL  258 (604)
T ss_pred             HHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHH
Confidence            7899999999   899999999999999999999999999999876532111           11244679999999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           71 VTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        71 ~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.....++.+|+|+|||++|.|+.|.+||.+.+.
T Consensus       259 L~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne  292 (604)
T KOG0592|consen  259 LNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE  292 (604)
T ss_pred             hcCCCCCcccchHHHHHHHHHHhcCCCCCccccH
Confidence            9999999999999999999999999999987754

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-30  Score=164.98  Aligned_cols=100  Identities=27%  Similarity=0.494  Sum_probs=87.0

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCC------CceEEecccccccCCCCCcceecccccccccccccceeccC
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED------HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~   74 (110)
                      .||+.|+++||   +++||||||||+|||++..      -.+|++|||+++......   ...+.+|++-|||||++...
T Consensus       116 ~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~a~tlcGSplYMAPEV~~~~  189 (429)
T KOG0595|consen  116 QQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS---MAETLCGSPLYMAPEVIMSQ  189 (429)
T ss_pred             HHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh---HHHHhhCCccccCHHHHHhc
Confidence            38999999999   8999999999999999765      457999999998765332   33455799999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      .|+.++|+||.|+++|++++|..||...++.+
T Consensus       190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~e  221 (429)
T KOG0595|consen  190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKE  221 (429)
T ss_pred             cccchhhHHHHHHHHHHHHhCCCCccccCHHH
Confidence            99999999999999999999999999766554

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=5.6e-30  Score=164.11  Aligned_cols=99  Identities=30%  Similarity=0.488  Sum_probs=84.7

Q ss_pred             CcHHHHHHHHhcCCCCC-eEEcCCCCCceEECCCC-ceEEecccccccCCCCCcceecccccccccccccceec--cCCC
Q 043407            1 MEIANALAYLHVGFPRP-IVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT--TGDY   76 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~-~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~   76 (110)
                      +||+.||.|||   +.+ ||||||||+|+|++.+. .+||+|||+++......  .......||..|||||++.  ...+
T Consensus       149 ldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~  223 (362)
T KOG0192|consen  149 LDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPY  223 (362)
T ss_pred             HHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcC
Confidence            47999999999   677 99999999999999997 99999999987654321  1111247899999999999  5689


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||||+++||+++|+.||.+.+.
T Consensus       224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~  251 (362)
T KOG0192|consen  224 TEKSDVYSFGIVLWELLTGEIPFEDLAP  251 (362)
T ss_pred             CccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence            9999999999999999999999988775

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.5e-30  Score=168.03  Aligned_cols=103  Identities=28%  Similarity=0.497  Sum_probs=90.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ++++||+|||   ..+|+|||||++||+++.++.+|+.|||+|-.........  .+-.||+.|||||++....|+++.|
T Consensus       377 e~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR--~TmVGTPYWMAPEVvtrk~YG~KVD  451 (550)
T KOG0578|consen  377 EILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR--STMVGTPYWMAPEVVTRKPYGPKVD  451 (550)
T ss_pred             HHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc--ccccCCCCccchhhhhhcccCcccc
Confidence            4678999999   8999999999999999999999999999998776555433  3337999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcccccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGDRHW  109 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~~~~  109 (110)
                      +||||++++||+.|++||-.+++..-.|
T Consensus       452 IWSLGIMaIEMveGEPPYlnE~PlrAly  479 (550)
T KOG0578|consen  452 IWSLGIMAIEMVEGEPPYLNENPLRALY  479 (550)
T ss_pred             chhhhhHHHHHhcCCCCccCCChHHHHH
Confidence            9999999999999999998776654433

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=4.9e-30  Score=168.53  Aligned_cols=100  Identities=23%  Similarity=0.451  Sum_probs=88.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|+.|||   +.+|+|||||-.|++++.+..+|++||||+.....+....  .+.+|||.|.|||++.....+..+|
T Consensus       126 QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk--~TlCGTPNYIAPEVl~k~gHsfEvD  200 (592)
T KOG0575|consen  126 QIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK--KTLCGTPNYIAPEVLNKSGHSFEVD  200 (592)
T ss_pred             HHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCccccc--ceecCCCcccChhHhccCCCCCchh
Confidence            8999999999   8999999999999999999999999999997665433332  3448999999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +||+||++|.++.|++||+..+-++
T Consensus       201 iWSlGcvmYtLL~G~PPFetk~vke  225 (592)
T KOG0575|consen  201 IWSLGCVMYTLLVGRPPFETKTVKE  225 (592)
T ss_pred             hhhhhhHHHhhhhCCCCcccchHHH
Confidence            9999999999999999998775443

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.96  E-value=2.4e-30  Score=159.58  Aligned_cols=103  Identities=23%  Similarity=0.439  Sum_probs=91.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.++|||||||.||+++.++.+|++|||+++....+.......  ..|+.|.|||.+.+ ..|+..+
T Consensus       109 Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY--VATRWYRaPELLvGDtqYG~pV  183 (396)
T KOG0593|consen  109 QLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY--VATRWYRAPELLVGDTQYGKPV  183 (396)
T ss_pred             HHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh--hhhhhccChhhhcccCcCCCcc
Confidence            7899999999   8999999999999999999999999999999876544444333  46788999999988 6789999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcccccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGDRHW  109 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~~~~  109 (110)
                      |+|++||++.|+++|++.|+|...-|+.|
T Consensus       184 DiWAiGCv~aEl~~G~pL~PG~SDiDQLy  212 (396)
T KOG0593|consen  184 DIWAIGCVFAELLTGEPLWPGRSDIDQLY  212 (396)
T ss_pred             cchhhhHHHHHHhcCCcCCCCcchHHHHH
Confidence            99999999999999999999998888754

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=158.75  Aligned_cols=97  Identities=32%  Similarity=0.478  Sum_probs=84.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceecccccccccccccceeccCC-CC-c
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YN-E   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~-~   78 (110)
                      |+++|++|||   +++|+||||||+|++++.+ +.+|++|||++....  .........+|++.|+|||++.+.. |+ .
T Consensus       128 Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~  202 (370)
T KOG0583|consen  128 QLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGK  202 (370)
T ss_pred             HHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCc
Confidence            8999999999   8999999999999999999 999999999998764  1122233457999999999999877 75 7


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|+++|.|++|..||...+
T Consensus       203 ~aDvWS~GViLy~ml~G~~PF~d~~  227 (370)
T KOG0583|consen  203 AADVWSLGVILYVLLCGRLPFDDSN  227 (370)
T ss_pred             hhhhhhhHHHHHHHHhCCCCCCCcc
Confidence            8999999999999999999998755

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2e-29  Score=163.32  Aligned_cols=102  Identities=34%  Similarity=0.505  Sum_probs=87.3

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      .|||+||+||.   ++++|||||..+|||++.+..+||+|||+++...++....+... -.+.+|+|||.+..+.|+.++
T Consensus       310 ~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~-kfPIkWtAPEa~~~~~FS~kS  385 (468)
T KOG0197|consen  310 AQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGG-KFPIKWTAPEALNYGKFSSKS  385 (468)
T ss_pred             HHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCC-CCCceecCHHHHhhCCccccc
Confidence            38999999999   89999999999999999999999999999995544444333332 345689999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      |+||||+++||++| |+.||.+.+-.+
T Consensus       386 DVWSFGVlL~E~fT~G~~py~~msn~e  412 (468)
T KOG0197|consen  386 DVWSFGVLLWELFTYGRVPYPGMSNEE  412 (468)
T ss_pred             ceeehhhhHHHHhccCCCCCCCCCHHH
Confidence            99999999999998 999998776443

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.95  E-value=9.6e-29  Score=154.10  Aligned_cols=101  Identities=24%  Similarity=0.408  Sum_probs=86.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      ||+.|++|||   +++|+||||||.|+++++.+.+|++|||+++...-+....  ....+|..|.|||++.+. .|+...
T Consensus       128 Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~y--t~evvTlWYRaPEvLlGs~~Ys~~v  202 (323)
T KOG0594|consen  128 QLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTY--TPEVVTLWYRAPEVLLGSTSYSTSV  202 (323)
T ss_pred             HHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccc--cccEEEeeccCHHHhcCCCcCCCCc
Confidence            8999999999   8999999999999999999999999999998654333222  223678889999999887 588999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      |+||+||++.||++++..|.++...++
T Consensus       203 DiWs~GcIfaEm~~~~~LFpG~se~~q  229 (323)
T KOG0594|consen  203 DIWSLGCIFAEMFTRRPLFPGDSEIDQ  229 (323)
T ss_pred             chHhHHHHHHHHHhCCCCCCCCcHHHH
Confidence            999999999999999999998876544

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-29  Score=164.72  Aligned_cols=106  Identities=28%  Similarity=0.487  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc---CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~   78 (110)
                      ||++||.|||   .++|||||||+.||++..++.++|.|||++..-.......-...+.+...|||||++..   .+|+.
T Consensus       496 QiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~  572 (678)
T KOG0193|consen  496 QIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSF  572 (678)
T ss_pred             HHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCc
Confidence            7899999999   89999999999999999999999999999754322211111223357788999999865   45899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCccccccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL  110 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~~~~~~  110 (110)
                      ++|+||||++.||+++|..||+..+....+||
T Consensus       573 qSDVYaFGiV~YELltg~lPysi~~~dqIifm  604 (678)
T KOG0193|consen  573 QSDVYAFGIVWYELLTGELPYSIQNRDQIIFM  604 (678)
T ss_pred             ccchhhhhHHHHHHHhCcCCcCCCChhheEEE
Confidence            99999999999999999999994444444554

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-29  Score=166.85  Aligned_cols=102  Identities=30%  Similarity=0.532  Sum_probs=90.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +|+.||.|||   .++|||||||+.|||+..+..+|++|||-++...... .  .....|+..|||||++...+.+.++|
T Consensus       220 ~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S-T--kMSFaGTVaWMAPEvIrnePcsEKVD  293 (904)
T KOG4721|consen  220 GIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS-T--KMSFAGTVAWMAPEVIRNEPCSEKVD  293 (904)
T ss_pred             HhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhh-h--hhhhhhhHhhhCHHHhhcCCcccccc
Confidence            7899999999   8999999999999999999999999999877654432 2  23447999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcccccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGDRHW  109 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~~~~  109 (110)
                      +||||+++|||+||..||...+..-++|
T Consensus       294 IwSfGVVLWEmLT~EiPYkdVdssAIIw  321 (904)
T KOG4721|consen  294 IWSFGVVLWEMLTGEIPYKDVDSSAIIW  321 (904)
T ss_pred             eehhHHHHHHHHhcCCCccccchheeEE
Confidence            9999999999999999999888777766

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.95  E-value=1e-28  Score=154.60  Aligned_cols=100  Identities=33%  Similarity=0.513  Sum_probs=87.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      ||..|+.|||   ..+|+||||||.|+++|.+ +.+|++|||-++......++..   ...++.|.|||.+.+. .|+.+
T Consensus       133 Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniS---YicSRyYRaPELifga~~Yt~~  206 (364)
T KOG0658|consen  133 QLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNIS---YICSRYYRAPELIFGATEYTTS  206 (364)
T ss_pred             HHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCcee---EEEeccccCHHHHcCccccCce
Confidence            7899999999   8999999999999999976 8899999999998766555432   2467789999999875 48999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      .|+||.||++.|++.|++.|+|+++.+|
T Consensus       207 IDiWSaGCV~aELl~g~plFpG~s~~dQ  234 (364)
T KOG0658|consen  207 IDIWSAGCVMAELLKGQPLFPGDSSVDQ  234 (364)
T ss_pred             eEEhhhhHHHHHHhcCCcccCCCCHHHH
Confidence            9999999999999999999999988765

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.6e-29  Score=160.60  Aligned_cols=97  Identities=30%  Similarity=0.493  Sum_probs=82.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCcceecccccccccccccceeccCCC--
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY--   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~--   76 (110)
                      |++.|+.|||   +.||+||||||+|||+..+   ..+|+.|||+++......   ...+.+||+.|.|||++.....  
T Consensus       284 Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s---fm~TlCGTpsYvAPEVl~~kg~~~  357 (475)
T KOG0615|consen  284 QLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS---FMKTLCGTPSYVAPEVLASKGVEY  357 (475)
T ss_pred             HHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhccccce---ehhhhcCCccccChhheecCCeec
Confidence            7899999999   8999999999999999766   678999999998765322   2234589999999999987653  


Q ss_pred             -CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 -NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 -~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                       ..++|+||+||++|.+++|.+||++...
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~  386 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYT  386 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccC
Confidence             3478999999999999999999987644

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.95  E-value=1.6e-28  Score=159.70  Aligned_cols=103  Identities=21%  Similarity=0.406  Sum_probs=85.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCC-----------------------CCcc---ee
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-----------------------GETH---IK   55 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~-----------------------~~~~---~~   55 (110)
                      +.+.|+..+|   +.|+|||||||+|+|+|..|++|++||||+.....                       ....   ..
T Consensus       249 E~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (550)
T KOG0605|consen  249 ETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPR  325 (550)
T ss_pred             HHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCcccccccccc
Confidence            4677999999   89999999999999999999999999999843110                       0000   00


Q ss_pred             -------------------cccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           56 -------------------DAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        56 -------------------~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                                         ...-.|||.|+|||++.+..++..+|.||+||++||++.|.+||.++++.+.
T Consensus       326 ~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T  396 (550)
T KOG0605|consen  326 STMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQET  396 (550)
T ss_pred             chhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                               0124589999999999999999999999999999999999999999988753

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=5.1e-28  Score=156.72  Aligned_cols=102  Identities=24%  Similarity=0.381  Sum_probs=87.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.||+|||   .++++|||||..|||++.+|.+|++|||+++.+........ .....|..|.+||.+.+.. |+..+
T Consensus       226 QLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~-T~rVvTLWYRpPELLLG~t~Yg~aV  301 (560)
T KOG0600|consen  226 QLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPY-TSRVVTLWYRPPELLLGATSYGTAV  301 (560)
T ss_pred             HHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCCCccc-ccceEEeeccChHHhcCCcccccce
Confidence            7899999999   89999999999999999999999999999986543322211 1225788999999999864 89999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      |+||.||++.|++.|+++|++.+..+|
T Consensus       302 DlWS~GCIl~El~~gkPI~~G~tEveQ  328 (560)
T KOG0600|consen  302 DLWSVGCILAELFLGKPILQGRTEVEQ  328 (560)
T ss_pred             eehhhhHHHHHHHcCCCCcCCccHHHH
Confidence            999999999999999999999987665

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=2.7e-28  Score=153.16  Aligned_cols=97  Identities=32%  Similarity=0.506  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCC-CCcceecccccccccccccceeccC-CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPD-GETHIKDAIPIGIMGFVATEYVTTG-DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~   78 (110)
                      ||++|+.|||   +++++|+||||+|||++. ++.+|++|||.++.... ...........|++.||+||++..+ ....
T Consensus       125 ~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~  201 (313)
T KOG0198|consen  125 QILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARR  201 (313)
T ss_pred             HHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCc
Confidence            7899999999   899999999999999999 79999999998876543 1111222334699999999999853 3445


Q ss_pred             hhhHHHHHHHHHHHHhCCCCccc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .+|+||+||++.||+||..||..
T Consensus       202 ~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  202 ESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             cchhhhcCCEEEeccCCCCcchh
Confidence            89999999999999999999986

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.94  E-value=1.8e-27  Score=153.31  Aligned_cols=101  Identities=24%  Similarity=0.423  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc----------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----------------------------   53 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------   53 (110)
                      |++.|++|||   +.+++||||||+||+++.++.++++|||++.........                            
T Consensus       109 qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (363)
T cd05628         109 ETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETW  185 (363)
T ss_pred             HHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchh
Confidence            7889999999   899999999999999999999999999998643211000                            


Q ss_pred             -----eecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           54 -----IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        54 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                           .......|++.|+|||++.+..++.++|+||+|+++||+++|..||.+.+..
T Consensus       186 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~  242 (363)
T cd05628         186 KRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ  242 (363)
T ss_pred             hhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHH
Confidence                 0011236889999999998888999999999999999999999999876544

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.94  E-value=1.3e-27  Score=157.36  Aligned_cols=96  Identities=28%  Similarity=0.496  Sum_probs=85.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+++|+.|||   +.+|+|||+||.||+++.++.+|++|||+++.+.....-..  ...|++-|||||...+.+|+..+|
T Consensus       108 ~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt--sikGtPlYmAPElv~e~pyd~~sD  182 (808)
T KOG0597|consen  108 DLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT--SIKGTPLYMAPELVEEQPYDHTSD  182 (808)
T ss_pred             HHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCceeee--eccCcccccCHHHHcCCCccchhh
Confidence            6789999999   89999999999999999999999999999998866433222  225999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      .||+||++||+..|++||-..
T Consensus       183 lWslGcilYE~~~G~PPF~a~  203 (808)
T KOG0597|consen  183 LWSLGCILYELYVGQPPFYAR  203 (808)
T ss_pred             HHHHHHHHHHHhcCCCCchHH
Confidence            999999999999999999543

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.5e-27  Score=153.49  Aligned_cols=97  Identities=31%  Similarity=0.550  Sum_probs=87.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||++||   ..+|+.||+||.|||+|+.|.++++|+|++..++...+....   .||.+|||||++....|+...|
T Consensus       295 Ei~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~r---vGT~GYMAPEvl~ne~Y~~s~D  368 (591)
T KOG0986|consen  295 EIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGR---VGTVGYMAPEVLQNEVYDFSPD  368 (591)
T ss_pred             HHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccc---cCcccccCHHHHcCCcccCCcc
Confidence            6888999999   899999999999999999999999999999988876655432   6999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .||+||++|||+.|+.||.....
T Consensus       369 wf~lGCllYemi~G~sPFr~~Ke  391 (591)
T KOG0986|consen  369 WFSLGCLLYEMIAGHSPFRQRKE  391 (591)
T ss_pred             HHHHHhHHHHHHcccCchhhhhh
Confidence            99999999999999999976543

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=4.7e-27  Score=149.91  Aligned_cols=99  Identities=26%  Similarity=0.471  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++...............++..|+|||.+....++.++|
T Consensus       182 qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  258 (338)
T cd05102         182 QVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSD  258 (338)
T ss_pred             HHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccC
Confidence            7899999999   8999999999999999999999999999987654332222222224556899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||+++||+++ |..||.+..
T Consensus       259 iwslG~il~el~~~g~~pf~~~~  281 (338)
T cd05102         259 VWSFGVLLWEIFSLGASPYPGVQ  281 (338)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999997 999997654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=4.8e-27  Score=147.60  Aligned_cols=99  Identities=16%  Similarity=0.223  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-----eecccccccccccccceeccCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~   76 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++........     .......|++.|++||...+..+
T Consensus       134 qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~  210 (294)
T PHA02882        134 DMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACV  210 (294)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCC
Confidence            7899999999   899999999999999999999999999998765321111     11122358889999999988889


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|++++|+++|..||.+.+
T Consensus       211 ~~~~DiwSlG~~l~el~~g~~P~~~~~  237 (294)
T PHA02882        211 TRRGDLESLGYCMLKWAGIKLPWKGFG  237 (294)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence            999999999999999999999998764

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.94  E-value=1e-27  Score=158.55  Aligned_cols=99  Identities=26%  Similarity=0.341  Sum_probs=86.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC--CceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      ||++||.+||   +.+|||+||||+|||+.+.  ..+||+|||.++.......     +.+.++.|.|||++++.+|+.+
T Consensus       297 Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~  368 (586)
T KOG0667|consen  297 QILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTA  368 (586)
T ss_pred             HHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCc
Confidence            7899999999   8999999999999999654  4689999998865433222     2356778999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCccccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDRH  108 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~~  108 (110)
                      .|+|||||++.||.+|.+.|+|++..||.
T Consensus       369 IDmWSLGCIlAEL~tG~PLfpG~ne~DQl  397 (586)
T KOG0667|consen  369 IDMWSLGCILAELFTGEPLFPGDNEYDQL  397 (586)
T ss_pred             cceeehhhhHHhHhcCccccCCCCHHHHH
Confidence            99999999999999999999999988764

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.94  E-value=2.3e-27  Score=150.73  Aligned_cols=98  Identities=27%  Similarity=0.497  Sum_probs=83.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++........  .....|++.|+|||++....++.++|
T Consensus       109 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (323)
T cd05616         109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVD  183 (323)
T ss_pred             HHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc--cccCCCChhhcCHHHhcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998653321111  12235788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       184 iwSlGvil~elltg~~Pf~~~~~  206 (323)
T cd05616         184 WWAFGVLLYEMLAGQAPFEGEDE  206 (323)
T ss_pred             hhchhHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=4.4e-27  Score=149.49  Aligned_cols=98  Identities=28%  Similarity=0.520  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (324)
T cd05587         109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT--TRTFCGTPDYIAPEIIAYQPYGKSVD  183 (324)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc--eeeecCCccccChhhhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999997643221111  12235888999999999888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|+.||.+.+.
T Consensus       184 iwslGvil~elltG~~pf~~~~~  206 (324)
T cd05587         184 WWAFGVLLYEMLAGQPPFDGEDE  206 (324)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=4.2e-27  Score=156.78  Aligned_cols=100  Identities=26%  Similarity=0.369  Sum_probs=85.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||+++...............|++.|+|||.+....++.++|
T Consensus       151 qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~D  227 (496)
T PTZ00283        151 QVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKAD  227 (496)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999987654322222222346888999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       228 VwSlGvilyeLltG~~Pf~~~~~  250 (496)
T PTZ00283        228 MFSLGVLLYELLTLKRPFDGENM  250 (496)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999987654

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-27  Score=149.31  Aligned_cols=103  Identities=23%  Similarity=0.382  Sum_probs=87.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceec-ccccccccccccceecc-CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTT-GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~-~~~~~~   79 (110)
                      |++.|++|+|   +.+++|||+||.|++++.+...|++|||+++..... ..... .....|..|.|||++.. ..++..
T Consensus       133 QiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~a  208 (359)
T KOG0660|consen  133 QILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKA  208 (359)
T ss_pred             HHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeecccc-CcccchhcceeeeeecCHHHHhccccccch
Confidence            7899999999   899999999999999999999999999999877543 11111 12257788999998864 458999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCccccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDRH  108 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~~  108 (110)
                      .|+||.||++.|+++|++.|.|.+..+|.
T Consensus       209 iDiWSvGCI~AEmL~gkplFpG~d~v~Ql  237 (359)
T KOG0660|consen  209 IDIWSVGCILAEMLTGKPLFPGKDYVHQL  237 (359)
T ss_pred             hhhhhhhHHHHHHHcCCCCCCCCchHHHH
Confidence            99999999999999999999999877664

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.94  E-value=6.2e-27  Score=148.45  Aligned_cols=98  Identities=34%  Similarity=0.602  Sum_probs=83.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++........  ......|++.|++||++.+..++.++|
T Consensus       104 qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05592         104 EIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--KASTFCGTPDYIAPEILKGQKYNESVD  178 (316)
T ss_pred             HHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--ccccccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999875432221  112235888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       179 vwslG~il~ell~G~~Pf~~~~~  201 (316)
T cd05592         179 WWSFGVLLYEMLIGQSPFHGEDE  201 (316)
T ss_pred             chhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=2.7e-27  Score=150.44  Aligned_cols=97  Identities=26%  Similarity=0.487  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++........  .....|++.|+|||.+....++.++|
T Consensus       103 qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05571         103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--ccceecCccccChhhhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998643221111  12235888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++|+++|..||.+.+
T Consensus       178 iwSlG~il~elltg~~Pf~~~~  199 (323)
T cd05571         178 WWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             CcccchhhhhhhcCCCCCCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.94  E-value=4.4e-27  Score=143.87  Aligned_cols=96  Identities=32%  Similarity=0.518  Sum_probs=82.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC---CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~   78 (110)
                      -+++||.||-.  +.++||||+||.||++|..|.+|++|||.+-++.+...+.   ...|++.||+||.+...   .|+.
T Consensus       199 a~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht---rsAGC~~YMaPERidp~~~~kYDi  273 (391)
T KOG0983|consen  199 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT---RSAGCAAYMAPERIDPPDKPKYDI  273 (391)
T ss_pred             HHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccc---cccCCccccCccccCCCCCCccch
Confidence            35789999974  7799999999999999999999999999987766544332   23689999999999654   4889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++|+||||+.++|+.||+.||.+-
T Consensus       274 RaDVWSlGITlveLaTg~yPy~~c  297 (391)
T KOG0983|consen  274 RADVWSLGITLVELATGQYPYKGC  297 (391)
T ss_pred             hhhhhhhccchhhhhcccCCCCCC
Confidence            999999999999999999999873

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=3.6e-27  Score=143.14  Aligned_cols=102  Identities=22%  Similarity=0.321  Sum_probs=88.3

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      +++++|++|||   ++.|+|||+||.|+++++++.+|++|||+++.+..........  ..++.|.|||.+-+.+ |+..
T Consensus       108 ~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~--V~TRWYRAPELLfGsr~Yg~~  182 (318)
T KOG0659|consen  108 LMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQ--VVTRWYRAPELLFGSRQYGTG  182 (318)
T ss_pred             HHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccc--eeeeeccChHHhccchhcCCc
Confidence            36789999999   8999999999999999999999999999999876544333222  5788999999987765 8899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      +|+||.||++.|++-|.+.|.|++.-||
T Consensus       183 VDmWavGCI~AELllr~P~fpG~sDidQ  210 (318)
T KOG0659|consen  183 VDMWAVGCIFAELLLRVPFFPGDSDIDQ  210 (318)
T ss_pred             chhhhHHHHHHHHHccCCCCCCCchHHH
Confidence            9999999999999999999999987765

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.5e-27  Score=150.77  Aligned_cols=100  Identities=47%  Similarity=0.765  Sum_probs=84.5

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCC-CCcceecccccccccccccceeccCCCCch
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      +++|.||+|||.....+|||||||+.||++|.+..+|++|||+++..+. ........  .|+..|++||+...+..+.+
T Consensus       181 ~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~~--~gt~gY~~PEy~~~g~lt~K  258 (361)
T KOG1187|consen  181 LGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTTV--MGTFGYLAPEYASTGKLTEK  258 (361)
T ss_pred             HHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeeec--CCCCccCChhhhccCCcCcc
Confidence            3688999999986666899999999999999999999999999976654 22222111  58889999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +|+||||+++.|+++|+.+....
T Consensus       259 sDVySFGVvllElitgr~~~d~~  281 (361)
T KOG1187|consen  259 SDVYSFGVVLLELITGRKAVDQS  281 (361)
T ss_pred             cccccchHHHHHHHhCCcccCCC
Confidence            99999999999999999877644

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=1.1e-26  Score=145.41  Aligned_cols=97  Identities=28%  Similarity=0.514  Sum_probs=83.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........   ....|+..|+|||.+....++.++|
T Consensus       110 qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05631         110 ELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV---RGRVGTVGYMAPEVINNEKYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee---cCCCCCCCccCHhhhcCCCCCcccC
Confidence            7889999999   899999999999999999999999999998765432211   1225788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|+.||.+.+.
T Consensus       184 vwslGvil~el~~g~~pf~~~~~  206 (285)
T cd05631         184 WWGLGCLIYEMIQGQSPFRKRKE  206 (285)
T ss_pred             chhHHHHHHHHHhCCCCCCCCCc
Confidence            99999999999999999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=8.3e-27  Score=148.23  Aligned_cols=98  Identities=28%  Similarity=0.506  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||.+....++.++|
T Consensus       103 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05595         103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc--cccccCCcCcCCcccccCCCCCchhc
Confidence            7899999999   899999999999999999999999999987643222111  12235888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       178 iwSlGvil~ell~g~~Pf~~~~~  200 (323)
T cd05595         178 WWGLGVVMYEMMCGRLPFYNQDH  200 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=1.1e-26  Score=147.32  Aligned_cols=98  Identities=30%  Similarity=0.533  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05620         104 EIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR--ASTFCGTPDYIAPEILQGLKYTFSVD  178 (316)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc--eeccCCCcCccCHHHHcCCCCCcccc
Confidence            7899999999   899999999999999999999999999987643221111  12235788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       179 iwslGvil~el~~g~~Pf~~~~~  201 (316)
T cd05620         179 WWSFGVLLYEMLIGQSPFHGDDE  201 (316)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.4e-26  Score=153.78  Aligned_cols=100  Identities=25%  Similarity=0.358  Sum_probs=85.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||+++...............|++.|++||++....++.++|
T Consensus       177 qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  253 (478)
T PTZ00267        177 QIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKAD  253 (478)
T ss_pred             HHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHh
Confidence            7889999999   8999999999999999999999999999987654332222223345888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       254 v~slG~~l~el~tg~~Pf~~~~~  276 (478)
T PTZ00267        254 MWSLGVILYELLTLHRPFKGPSQ  276 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976543

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=6.1e-27  Score=149.14  Aligned_cols=98  Identities=27%  Similarity=0.486  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||.+....++.++|
T Consensus       103 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (328)
T cd05593         103 EIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  177 (328)
T ss_pred             HHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc--cccccCCcCccChhhhcCCCCCccCC
Confidence            7899999999   899999999999999999999999999998643221111  12235888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       178 iwslGvil~elltG~~Pf~~~~~  200 (328)
T cd05593         178 WWGLGVVMYEMMCGRLPFYNQDH  200 (328)
T ss_pred             ccccchHHHHHhhCCCCCCCCCH
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=7.5e-27  Score=148.30  Aligned_cols=99  Identities=26%  Similarity=0.477  Sum_probs=83.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++....++.++|
T Consensus       104 ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (320)
T cd05590         104 EITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT--TSTFCGTPDYIAPEILQEMLYGPSVD  178 (320)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc--ccccccCccccCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999997653222111  12235888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|++++|..||.+.+..
T Consensus       179 iwslG~il~el~~g~~Pf~~~~~~  202 (320)
T cd05590         179 WWAMGVLLYEMLCGHAPFEAENED  202 (320)
T ss_pred             hhhhHHHHHHHhhCCCCCCCCCHH
Confidence            999999999999999999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.5e-27  Score=147.78  Aligned_cols=97  Identities=26%  Similarity=0.405  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++........  .....|++.|+|||.+.+..++.++|
T Consensus       101 qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  175 (312)
T cd05585         101 ELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK--TNTFCGTPEYLAPELLLGHGYTKAVD  175 (312)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc--cccccCCcccCCHHHHcCCCCCCccc
Confidence            7889999999   899999999999999999999999999998754322211  12235888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+.+
T Consensus       176 vwslGvil~el~tg~~pf~~~~  197 (312)
T cd05585         176 WWTLGVLLYEMLTGLPPFYDEN  197 (312)
T ss_pred             eechhHHHHHHHhCCCCcCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=4.3e-27  Score=149.57  Aligned_cols=98  Identities=28%  Similarity=0.439  Sum_probs=83.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++|
T Consensus       104 qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (325)
T cd05602         104 EIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT--TSTFCGTPEYLAPEVLHKQPYDRTVD  178 (325)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC--cccccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998643222111  12235888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       179 iwslG~il~el~~g~~pf~~~~~  201 (325)
T cd05602         179 WWCLGAVLYEMLYGLPPFYSRNT  201 (325)
T ss_pred             cccccHHHHHHhcCCCCCCCCCH
Confidence            99999999999999999976654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=4.2e-27  Score=149.39  Aligned_cols=99  Identities=25%  Similarity=0.479  Sum_probs=83.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++....++.++|
T Consensus       104 qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (321)
T cd05591         104 EVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT--TTTFCGTPDYIAPEILQELEYGPSVD  178 (321)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcc--ccccccCccccCHHHHcCCCCCCccc
Confidence            6889999999   899999999999999999999999999988653222111  12235788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|++++|..||.+.+..
T Consensus       179 vwslG~il~el~tg~~Pf~~~~~~  202 (321)
T cd05591         179 WWALGVLMYEMMAGQPPFEADNED  202 (321)
T ss_pred             eechhHHHHHHhcCCCCCCCCCHH
Confidence            999999999999999999876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=1.1e-26  Score=153.77  Aligned_cols=95  Identities=19%  Similarity=0.331  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCC----------------ceEEecccccccCCCCCcceeccccccccc
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDH----------------VAKLFDFSLAESIPDGETHIKDAIPIGIMG   64 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~   64 (110)
                      ||+.||.|||   . .+|+||||||.||+++.++                .+|++|||.+.......     ....+++.
T Consensus       239 qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~-----~~~~gt~~  310 (467)
T PTZ00284        239 QTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR-----TAIVSTRH  310 (467)
T ss_pred             HHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc-----ccccCCcc
Confidence            7899999999   5 5999999999999998654                48999999875432211     22368889


Q ss_pred             ccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           65 FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        65 ~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+|||++.+..++.++|+||+||++||+++|+.||.+.+.
T Consensus       311 Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~  350 (467)
T PTZ00284        311 YRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN  350 (467)
T ss_pred             ccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            9999999998999999999999999999999999987654

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.94  E-value=9.2e-27  Score=145.69  Aligned_cols=97  Identities=21%  Similarity=0.329  Sum_probs=83.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.......   ......+++.|+|||.+....++.++|
T Consensus       118 qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  191 (290)
T cd07862         118 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVD  191 (290)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCc---ccccccccccccChHHHhCCCCCCccc
Confidence            7899999999   8999999999999999999999999999986543321   112235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       192 iwslG~il~el~~g~~~f~~~~~  214 (290)
T cd07862         192 LWSVGCIFAEMFRRKPLFRGSSD  214 (290)
T ss_pred             hHHHHHHHHHHHcCCCCcCCCCH
Confidence            99999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.94  E-value=8.7e-27  Score=145.33  Aligned_cols=102  Identities=23%  Similarity=0.348  Sum_probs=89.1

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      +|++.|++|||   .+-|+|||+|+.|+++...|.+|++|||+++.+.++.....  ....|..|.|||.+.+.. |+..
T Consensus       184 ~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T--~lVVTLWYRaPELLLG~~tyst~  258 (419)
T KOG0663|consen  184 LQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT--PLVVTLWYRAPELLLGAKTYSTA  258 (419)
T ss_pred             HHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCcccCc--ceEEEeeecCHHHhcCCcccCcc
Confidence            48999999999   89999999999999999999999999999998766533222  225788999999998865 8899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      .|+||+||++.|++++.+.|+|....+|
T Consensus       259 iDMWSvGCI~aE~l~~kPlf~G~sE~dQ  286 (419)
T KOG0663|consen  259 VDMWSVGCIFAELLTQKPLFPGKSEIDQ  286 (419)
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCCchHHH
Confidence            9999999999999999999999876665

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.9e-27  Score=151.05  Aligned_cols=102  Identities=21%  Similarity=0.339  Sum_probs=90.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      ||++||+|+|   ++|+.|||+||+|||+..+..+|++|||+++...+..+...   ..+|+.|.|||++... -|+.+.
T Consensus       118 QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTe---YVSTRWYRAPEvLLrs~~Ys~pv  191 (538)
T KOG0661|consen  118 QILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTE---YVSTRWYRAPEVLLRSGYYSSPV  191 (538)
T ss_pred             HHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCcch---hhhcccccchHHhhhccccCCch
Confidence            8999999999   89999999999999999999999999999987765544432   2578899999998754 588999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcccccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGDRHW  109 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~~~~  109 (110)
                      |+|++||+++|+.+-++.|+|.+..|++|
T Consensus       192 D~wA~GcI~aEl~sLrPLFPG~sE~Dqi~  220 (538)
T KOG0661|consen  192 DMWAVGCIMAELYSLRPLFPGASEIDQIY  220 (538)
T ss_pred             HHHHHHHHHHHHHHhcccCCCCcHHHHHH
Confidence            99999999999999999999999988865

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.4e-26  Score=151.04  Aligned_cols=97  Identities=29%  Similarity=0.493  Sum_probs=88.9

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhhH
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDV   82 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~   82 (110)
                      +++|+.|||   +++||.|||||.|.+++.+|.+|+.|||+++......   +.++.+||+.|.|||++.....+..+|.
T Consensus       529 v~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---KTwTFcGTpEYVAPEIILnKGHD~avDy  602 (732)
T KOG0614|consen  529 VLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---KTWTFCGTPEYVAPEIILNKGHDRAVDY  602 (732)
T ss_pred             HHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC---ceeeecCCcccccchhhhccCcchhhHH
Confidence            568999999   8999999999999999999999999999998765433   5577799999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcccCCcc
Q 043407           83 FSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        83 ~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |++|++++|+++|.+||++.++.
T Consensus       603 WaLGIli~ELL~G~pPFs~~dpm  625 (732)
T KOG0614|consen  603 WALGILIYELLTGSPPFSGVDPM  625 (732)
T ss_pred             HHHHHHHHHHHcCCCCCCCCchH
Confidence            99999999999999999988764

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.4e-26  Score=145.33  Aligned_cols=95  Identities=31%  Similarity=0.518  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||+||+++.++.++++|||++.......     ....|++.|+|||.+.+..++.++|
T Consensus       109 qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  180 (291)
T cd05612         109 EIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVD  180 (291)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhh
Confidence            7889999999   8999999999999999999999999999987553321     1235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       181 iwSlG~il~~l~~g~~pf~~~~~  203 (291)
T cd05612         181 WWALGILIYEMLVGYPPFFDDNP  203 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999977654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.93  E-value=7.8e-27  Score=149.39  Aligned_cols=95  Identities=22%  Similarity=0.427  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.......     ....|++.|+|||++.+..++.++|
T Consensus       139 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  210 (340)
T PTZ00426        139 QIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT-----YTLCGTPEYIAPEILLNVGHGKAAD  210 (340)
T ss_pred             HHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc-----ceecCChhhcCHHHHhCCCCCcccc
Confidence            7889999999   8999999999999999999999999999987653221     2235888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.++
T Consensus       211 iwSlGvil~ell~G~~Pf~~~~~  233 (340)
T PTZ00426        211 WWTLGIFIYEILVGCPPFYANEP  233 (340)
T ss_pred             ccchhhHHHHHhcCCCCCCCCCH
Confidence            99999999999999999987654

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.93  E-value=9.5e-27  Score=140.63  Aligned_cols=98  Identities=31%  Similarity=0.508  Sum_probs=84.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      ||+.++.|||   .++|+|||+||.|+++.+   ..-+|++|||++........   -....|+|.||+||++...+++.
T Consensus       118 QiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~---~~G~~GtP~fmaPEvvrkdpy~k  191 (355)
T KOG0033|consen  118 QILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA---WHGFAGTPGYLSPEVLKKDPYSK  191 (355)
T ss_pred             HHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc---cccccCCCcccCHHHhhcCCCCC
Confidence            7899999999   899999999999999954   35679999999987763221   12336999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .+|+|+.|++++-++.|..||.+++..
T Consensus       192 pvDiW~cGViLfiLL~G~~PF~~~~~~  218 (355)
T KOG0033|consen  192 PVDIWACGVILYILLVGYPPFWDEDQH  218 (355)
T ss_pred             cchhhhhhHHHHHHHhCCCCCCCccHH
Confidence            999999999999999999999986554

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.93  E-value=1.5e-26  Score=147.10  Aligned_cols=98  Identities=28%  Similarity=0.485  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........  ......|++.|+|||.+.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~D  183 (324)
T cd05589         109 CVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD--RTSTFCGTPEFLAPEVLTETSYTRAVD  183 (324)
T ss_pred             HHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC--cccccccCccccCHhHhcCCCCCcccc
Confidence            6889999999   89999999999999999999999999998764322211  112335888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       184 iwslG~il~el~~G~~pf~~~~~  206 (324)
T cd05589         184 WWGLGVLIYEMLVGESPFPGDDE  206 (324)
T ss_pred             hhhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=2.1e-26  Score=149.67  Aligned_cols=100  Identities=25%  Similarity=0.301  Sum_probs=85.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................|++.|++||++....++.++|
T Consensus       193 ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  269 (392)
T PHA03207        193 RLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTD  269 (392)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654433222223346889999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+...
T Consensus       270 vwslGvil~el~~g~~pf~~~~~  292 (392)
T PHA03207        270 IWSAGLVLFEMSVKNVTLFGKQV  292 (392)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCC
Confidence            99999999999999999976543

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.93  E-value=1e-26  Score=150.35  Aligned_cols=99  Identities=23%  Similarity=0.446  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC----CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~   77 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++......... ......|++.|+|||++....    ++
T Consensus       150 qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~  225 (371)
T cd05622         150 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYG  225 (371)
T ss_pred             HHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc-cccCcccCccccCHHHHhccCCCccCC
Confidence            7889999999   899999999999999999999999999998765432211 112336889999999986543    67


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|+++||+++|..||.+.+.
T Consensus       226 ~~~DiwSlGvilyell~G~~Pf~~~~~  252 (371)
T cd05622         226 RECDWWSVGVFLYEMLVGDTPFYADSL  252 (371)
T ss_pred             CccceeehhHHHHHHHhCCCCCCCCCH
Confidence            899999999999999999999987653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.93  E-value=8.1e-27  Score=148.62  Aligned_cols=95  Identities=26%  Similarity=0.504  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++........     ...|++.|+|||.+....++.++|
T Consensus       126 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~D  197 (329)
T PTZ00263        126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-----TLCGTPEYLAPEVIQSKGHGKAVD  197 (329)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc-----eecCChhhcCHHHHcCCCCCCcce
Confidence            6889999999   89999999999999999999999999999876543221     235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       198 iwslG~il~elltg~~pf~~~~~  220 (329)
T PTZ00263        198 WWTMGVLLYEFIAGYPPFFDDTP  220 (329)
T ss_pred             eechHHHHHHHHcCCCCCCCCCH
Confidence            99999999999999999976654

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.93  E-value=9.3e-27  Score=147.77  Aligned_cols=97  Identities=26%  Similarity=0.454  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|+.|||   +.+++||||||.||+++.++.++++|||++........  ......+++.|++||.+....++.++|
T Consensus       104 qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (321)
T cd05603         104 EVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE--TTSTFCGTPEYLAPEVLRKEPYDRTVD  178 (321)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC--ccccccCCcccCCHHHhcCCCCCCcCc
Confidence            7899999999   89999999999999999999999999998864322111  112235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|..||.+.+
T Consensus       179 iwslG~il~el~~g~~pf~~~~  200 (321)
T cd05603         179 WWCLGAVLYEMLYGLPPFYSRD  200 (321)
T ss_pred             ccccchhhhhhhcCCCCCCCCC
Confidence            9999999999999999997764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=6.5e-27  Score=148.65  Aligned_cols=98  Identities=27%  Similarity=0.445  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........  ......|++.|++||.+....++.++|
T Consensus       104 qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (323)
T cd05575         104 EIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK--TTSTFCGTPEYLAPEVLRKQPYDRTVD  178 (323)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC--ccccccCChhhcChhhhcCCCCCcccc
Confidence            7899999999   89999999999999999999999999999864322211  112235788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       179 vwslG~il~ell~g~~pf~~~~~  201 (323)
T cd05575         179 WWCLGAVLYEMLYGLPPFYSRDT  201 (323)
T ss_pred             ccccchhhhhhhcCCCCCCCCCH
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=1.8e-26  Score=146.69  Aligned_cols=98  Identities=26%  Similarity=0.500  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (323)
T cd05615         109 EISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT--TRTFCGTPDYIAPEIIAYQPYGKSVD  183 (323)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc--ccCccCCccccCHHHHcCCCCCCccc
Confidence            7889999999   899999999999999999999999999998653222111  12235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       184 iwslGvil~elltG~~pf~~~~~  206 (323)
T cd05615         184 WWAYGVLLYEMLAGQPPFDGEDE  206 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=1.5e-26  Score=147.07  Aligned_cols=98  Identities=28%  Similarity=0.436  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++........  .....|++.|+|||.+....++.++|
T Consensus       108 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  182 (323)
T cd05584         108 EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV--THTFCGTIEYMAPEILMRSGHGKAVD  182 (323)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc--ccccCCCccccChhhccCCCCCCcce
Confidence            7889999999   899999999999999999999999999998643222111  12235888999999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       183 iwslG~il~ell~G~~pf~~~~~  205 (323)
T cd05584         183 WWSLGALMYDMLTGAPPFTAENR  205 (323)
T ss_pred             ecccHHHHHHHhcCCCCCCCCCH
Confidence            99999999999999999977653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.93  E-value=6.6e-27  Score=151.14  Aligned_cols=99  Identities=23%  Similarity=0.482  Sum_probs=82.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC----CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~   77 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++........ .......|++.|+|||++....    ++
T Consensus       150 qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~  225 (370)
T cd05621         150 EVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYG  225 (370)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCC
Confidence            7899999999   89999999999999999999999999999876533221 1222346889999999986543    67


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|+++|++++|..||.+.+.
T Consensus       226 ~~~DiwSlG~ilyell~G~~Pf~~~~~  252 (370)
T cd05621         226 RECDWWSVGVFLFEMLVGDTPFYADSL  252 (370)
T ss_pred             cccCEEeehHHHHHHHhCCCCCCCCCH
Confidence            889999999999999999999976653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=2.2e-26  Score=146.00  Aligned_cols=98  Identities=33%  Similarity=0.552  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++|
T Consensus       104 qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05619         104 EIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK--TCTFCGTPDYIAPEILLGQKYNTSVD  178 (316)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc--eeeecCCccccCHHHHcCCCCCchhh
Confidence            7899999999   899999999999999999999999999998643221111  12235788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       179 vwslG~il~el~~G~~pf~~~~~  201 (316)
T cd05619         179 WWSFGVLLYEMLIGQSPFHGHDE  201 (316)
T ss_pred             hhhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.5e-26  Score=147.35  Aligned_cols=100  Identities=26%  Similarity=0.499  Sum_probs=88.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +|+.||-+||   +++||.||||.+|++++.++.+|+.|||.++.--.....  ..+.+|++.|+|||++.+.+|+..+|
T Consensus       458 EiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T--TkTFCGTPdYiAPEIi~YqPYgksvD  532 (683)
T KOG0696|consen  458 EIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVD  532 (683)
T ss_pred             HHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccCCcc--eeeecCCCcccccceEEecccccchh
Confidence            6788999999   899999999999999999999999999999864333222  23457999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      .||+|+++||++.|+.||.+++..+
T Consensus       533 WWa~GVLLyEmlaGQpPFdGeDE~e  557 (683)
T KOG0696|consen  533 WWAFGVLLYEMLAGQPPFDGEDEDE  557 (683)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            9999999999999999999987654

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.93  E-value=1.9e-26  Score=144.46  Aligned_cols=98  Identities=20%  Similarity=0.383  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|++|||   +.+++||||||+||+++.++.++++|||++.........  .....+++.|+|||.+.+ ..++.++
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (288)
T cd07871         111 QLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT--YSNEVVTLWYRPPDVLLGSTEYSTPI  185 (288)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc--ccCceecccccChHHhcCCcccCcHH
Confidence            7899999999   899999999999999999999999999998654322211  122256788999998865 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|+.||.+.+.
T Consensus       186 DiwslG~~l~~l~~g~~pf~~~~~  209 (288)
T cd07871         186 DMWGVGCILYEMATGRPMFPGSTV  209 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987654

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.93  E-value=6e-27  Score=151.68  Aligned_cols=100  Identities=27%  Similarity=0.427  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC------------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE------------------------------   51 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------   51 (110)
                      |++.|++|||   +.+++||||||+||+++.++.++++|||++.......                              
T Consensus       109 qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (382)
T cd05625         109 ELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRC  185 (382)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccc
Confidence            7889999999   8999999999999999999999999999874321000                              


Q ss_pred             ---------------cceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           52 ---------------THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        52 ---------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                                     .........|++.|+|||++.+..++.++|+||+||++||+++|+.||.+.++
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~  253 (382)
T cd05625         186 GDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP  253 (382)
T ss_pred             cccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCH
Confidence                           00001123578899999999888899999999999999999999999987654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=1.5e-26  Score=154.00  Aligned_cols=97  Identities=29%  Similarity=0.461  Sum_probs=85.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCC-chh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~   80 (110)
                      ||+.|+.|||   ..+++|||+||.|++++..+.+|++|||.+.....++.   ..+.+|++.|.+||++.+.+|. .++
T Consensus       120 QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl---LeTSCGSPHYA~PEIV~G~pYdG~~s  193 (786)
T KOG0588|consen  120 QILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL---LETSCGSPHYAAPEIVSGRPYDGRPS  193 (786)
T ss_pred             HHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCcc---ccccCCCcccCCchhhcCCCCCCCcc
Confidence            7899999999   89999999999999999999999999999876554432   2345799999999999999974 789


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++.+++|+.||.+++-
T Consensus       194 DVWSCGVILfALLtG~LPFdDdNi  217 (786)
T KOG0588|consen  194 DVWSCGVILFALLTGKLPFDDDNI  217 (786)
T ss_pred             ccchhHHHHHHHHhCCCCCCCccH
Confidence            999999999999999999997764

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.93  E-value=6.1e-27  Score=148.88  Aligned_cols=98  Identities=28%  Similarity=0.440  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|++||.+.+..++.++|
T Consensus       104 qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (325)
T cd05604         104 EIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAPEVIRKQPYDNTVD  178 (325)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC--cccccCChhhCCHHHHcCCCCCCcCc
Confidence            7899999999   899999999999999999999999999998643221111  12235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||...+.
T Consensus       179 vwslG~il~el~~G~~pf~~~~~  201 (325)
T cd05604         179 WWCLGAVLYEMLYGLPPFYCRDV  201 (325)
T ss_pred             cccccceehhhhcCCCCCCCCCH
Confidence            99999999999999999976653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.93  E-value=2.5e-26  Score=151.24  Aligned_cols=97  Identities=25%  Similarity=0.456  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++.++ .++++|||+++........   ....+++.|+|||++.+. .++.+
T Consensus       178 qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~  251 (440)
T PTZ00036        178 QLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRS---VSYICSRFYRAPELMLGATNYTTH  251 (440)
T ss_pred             HHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCc---ccCCCCcCccCHHHhcCCCCCCcH
Confidence            7899999999   89999999999999998664 6999999999765432211   122578889999988654 58899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+||++||+++|..||.+.+.
T Consensus       252 ~DiwSlGvil~elltG~~pf~~~~~  276 (440)
T PTZ00036        252 IDLWSLGCIIAEMILGYPIFSGQSS  276 (440)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            9999999999999999999987654

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=2.6e-26  Score=146.22  Aligned_cols=95  Identities=27%  Similarity=0.526  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||.+.+..++.++|
T Consensus       104 qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (327)
T cd05617         104 EICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTPNYIAPEILRGEEYGFSVD  178 (327)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCc--eecccCCcccCCHHHHCCCCCCchhe
Confidence            7899999999   899999999999999999999999999988643221111  12235888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||+|+++|++++|..||..
T Consensus       179 iwslGvil~ell~g~~pf~~  198 (327)
T cd05617         179 WWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             eehhHHHHHHHHhCCCCCCc
Confidence            99999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.93  E-value=7.4e-27  Score=148.50  Aligned_cols=98  Identities=26%  Similarity=0.493  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   + .+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++
T Consensus       103 qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~  177 (325)
T cd05594         103 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAV  177 (325)
T ss_pred             HHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcc--cccccCCcccCCHHHHccCCCCCcc
Confidence            7899999999   6 79999999999999999999999999998643222111  1123588899999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|+++|++++|..||.+.+.
T Consensus       178 DiwslG~il~el~tG~~Pf~~~~~  201 (325)
T cd05594         178 DWWGLGVVMYEMMCGRLPFYNQDH  201 (325)
T ss_pred             ccccccceeeeeccCCCCCCCCCH
Confidence            999999999999999999976543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.93  E-value=1.5e-26  Score=149.87  Aligned_cols=101  Identities=27%  Similarity=0.411  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc-----------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET-----------------------------   52 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-----------------------------   52 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++........                             
T Consensus       109 qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (381)
T cd05626         109 ELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRC  185 (381)
T ss_pred             HHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccccccc
Confidence            6889999999   89999999999999999999999999998753210000                             


Q ss_pred             ----------------ceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           53 ----------------HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        53 ----------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                                      ........|++.|+|||++....++.++|+||+||++||+++|..||...+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~  254 (381)
T cd05626         186 GDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT  254 (381)
T ss_pred             ccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHH
Confidence                            00001235888999999998888899999999999999999999999776543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=6.6e-26  Score=147.41  Aligned_cols=96  Identities=24%  Similarity=0.281  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++......... ......|++.|++||++.+..++.++|
T Consensus       190 qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~D  265 (391)
T PHA03212        190 SVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN-KYYGWAGTIATNAPELLARDPYGPAVD  265 (391)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc-ccccccCccCCCChhhhcCCCCCcHHH
Confidence            7899999999   889999999999999999999999999998643221111 112236889999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||+|+++||+++|..||-.
T Consensus       266 iwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        266 IWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             HHHHHHHHHHHHHCCCCcCC
Confidence            99999999999999977643

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.93  E-value=5.1e-26  Score=143.33  Aligned_cols=96  Identities=18%  Similarity=0.352  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........  .....+++.|+|||++.+. .++.++
T Consensus       111 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (303)
T cd07869         111 QLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT--YSNEVVTLWYRPPDVLLGSTEYSTCL  185 (303)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc--CCCCcccCCCCChHHHcCCCCCCcHH
Confidence            7899999999   899999999999999999999999999988643322111  1123567889999988654 478889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|..||.+.
T Consensus       186 DiwslG~il~~l~~g~~pf~~~  207 (303)
T cd07869         186 DMWGVGCIFVEMIQGVAAFPGM  207 (303)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.93  E-value=1.8e-26  Score=147.04  Aligned_cols=97  Identities=31%  Similarity=0.501  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++......... ......|++.|+|||.+.+.. ++.++
T Consensus       113 qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  188 (332)
T cd05614         113 EIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAV  188 (332)
T ss_pred             HHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCcc
Confidence            7899999999   899999999999999999999999999998754322211 112235888999999987653 67889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|+++|++++|..||...
T Consensus       189 DiwslG~il~elltg~~pf~~~  210 (332)
T cd05614         189 DWWSLGILIFELLTGASPFTLE  210 (332)
T ss_pred             ccccchhhhhhhhcCCCCCCCC
Confidence            9999999999999999999654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.93  E-value=3.7e-26  Score=146.97  Aligned_cols=97  Identities=22%  Similarity=0.338  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++........   .....+++.|+|||.+.+..++.++|
T Consensus       131 qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~D  204 (359)
T cd07876         131 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM---MTPYVVTRYYRAPEVILGMGYKENVD  204 (359)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCccccccCcc---CCCCcccCCCCCchhccCCCCCcchh
Confidence            7899999999   89999999999999999999999999999865432111   11225778899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|+.||.+.+.
T Consensus       205 iwSlG~il~el~tg~~pf~~~~~  227 (359)
T cd07876         205 IWSVGCIMGELVKGSVIFQGTDH  227 (359)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=3.9e-26  Score=145.42  Aligned_cols=99  Identities=24%  Similarity=0.388  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceecc--CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTT--GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~--~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++........ .......+++.|+|||++..  ..++.
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  187 (338)
T cd07859         111 QLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP  187 (338)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCc
Confidence            7899999999   899999999999999999999999999998754322111 11112357889999998765  56788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|+.||.+.+
T Consensus       188 ~~DvwSlGvvl~el~tg~~pf~~~~  212 (338)
T cd07859         188 AIDIWSIGCIFAEVLTGKPLFPGKN  212 (338)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.93  E-value=1.8e-26  Score=141.36  Aligned_cols=94  Identities=29%  Similarity=0.516  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC------C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG------D   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~------~   75 (110)
                      |+..|++|||   .++|+|||+||.||+++++..++++|||+++..+.+....   ..+|+|+|+|||.+...      .
T Consensus       131 qlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLr---elCGTPgYLAPEtikC~m~e~~pG  204 (411)
T KOG0599|consen  131 QLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLR---ELCGTPGYLAPETIKCSMYENHPG  204 (411)
T ss_pred             HHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeeccCCchhHH---HhcCCCcccChhheeeecccCCCC
Confidence            6788999999   8999999999999999999999999999998877665433   34799999999998542      4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      |+..+|.|++|+++|.++.|.+||..
T Consensus       205 Ys~EVD~Wa~GVImyTLLaGcpPFwH  230 (411)
T KOG0599|consen  205 YSKEVDEWACGVIMYTLLAGCPPFWH  230 (411)
T ss_pred             ccchhhHHHHHHHHHHHHcCCCchhH
Confidence            78889999999999999999999864

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=4.4e-26  Score=142.44  Aligned_cols=99  Identities=24%  Similarity=0.435  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||++......... ......+++.|+|||++.+..++.++|
T Consensus       108 qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (287)
T cd07848         108 QLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA-NYTEYVATRWYRSPELLLGAPYGKAVD  183 (287)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc-cccccccccccCCcHHHcCCCCCCchh
Confidence            7889999999   899999999999999999999999999998765432211 111235788899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|+.||.+.+.
T Consensus       184 iwslGvil~el~~g~~pf~~~~~  206 (287)
T cd07848         184 MWSVGCILGELSDGQPLFPGESE  206 (287)
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.93  E-value=4e-26  Score=147.02  Aligned_cols=97  Identities=22%  Similarity=0.343  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +++++||||||.||+++.++.++++|||++........   .....+++.|+|||.+.+..++.++|
T Consensus       134 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~D  207 (364)
T cd07875         134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  207 (364)
T ss_pred             HHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc---ccCCcccCCcCCHHHHhCCCCCchhh
Confidence            7889999999   89999999999999999999999999999865432211   11225788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       208 iwSlG~il~ell~g~~pf~~~~~  230 (364)
T cd07875         208 IWSVGCIMGEMIKGGVLFPGTDH  230 (364)
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.7e-26  Score=148.68  Aligned_cols=100  Identities=25%  Similarity=0.441  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc----------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----------------------------   53 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------   53 (110)
                      |++.||+|||   +.+++||||||.||+++.++.++++|||++.........                            
T Consensus       109 qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (364)
T cd05599         109 ETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKA  185 (364)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccc
Confidence            7899999999   899999999999999999999999999998654221100                            


Q ss_pred             --------eecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           54 --------IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        54 --------~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                              .......|++.|+|||++....++.++|+||+||+++|+++|..||.+.+.
T Consensus       186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~  244 (364)
T cd05599         186 ETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP  244 (364)
T ss_pred             cchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH
Confidence                    000123588899999999888899999999999999999999999987654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.93  E-value=6.4e-26  Score=145.62  Aligned_cols=96  Identities=21%  Similarity=0.323  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++........   .....+++.|+|||.+.+..++.++|
T Consensus       127 qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~D  200 (355)
T cd07874         127 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  200 (355)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccc---cCCccccCCccCHHHHcCCCCCchhh
Confidence            7899999999   89999999999999999999999999999875432211   11235788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+.+
T Consensus       201 iwslG~il~el~~g~~pf~~~~  222 (355)
T cd07874         201 IWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=8.9e-27  Score=150.67  Aligned_cols=101  Identities=23%  Similarity=0.395  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc------------ce---------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------------HI---------------   54 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~------------~~---------------   54 (110)
                      |++.||+|||   +.+++||||||.||+++.++.++++|||++........            ..               
T Consensus       109 ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (377)
T cd05629         109 ECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSIN  185 (377)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccccccc
Confidence            7889999999   89999999999999999999999999999853211000            00               


Q ss_pred             ------------------ecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           55 ------------------KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        55 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                                        ......|++.|+|||++....++.++|+||+||++||+++|..||.+.+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~  254 (377)
T cd05629         186 LTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSH  254 (377)
T ss_pred             ccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHH
Confidence                              000135888999999998888999999999999999999999999876543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.5e-26  Score=146.17  Aligned_cols=100  Identities=26%  Similarity=0.417  Sum_probs=87.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +++.|+.|+|   ..+.+|||||+.||++..++.+++.|||++-..+....  +..+..||+.|||||++....|+.++|
T Consensus       119 e~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~--rr~tfvGTPfwMAPEVI~~~~Y~~KAD  193 (467)
T KOG0201|consen  119 EVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK--RRKTFVGTPFWMAPEVIKQSGYDTKAD  193 (467)
T ss_pred             HHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh--ccccccccccccchhhhccccccchhh
Confidence            4678999999   78999999999999999999999999999866554332  225568999999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +||||++.+||.+|.+|+...++.-
T Consensus       194 IWSLGITaiEla~GePP~s~~hPmr  218 (467)
T KOG0201|consen  194 IWSLGITAIELAKGEPPHSKLHPMR  218 (467)
T ss_pred             hhhhhHHHHHHhcCCCCCcccCcce
Confidence            9999999999999999998877643

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.93  E-value=2.8e-26  Score=148.23  Aligned_cols=99  Identities=23%  Similarity=0.438  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG----DYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~----~~~   77 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++......... ......|++.|+|||++...    .++
T Consensus       150 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  225 (370)
T cd05596         150 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV-RCDTAVGTPDYISPEVLKSQGGDGYYG  225 (370)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc-cCCCCCCCcCeECHHHhccCCCCCCCC
Confidence            7899999999   899999999999999999999999999998765332211 11233688999999988653    367


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|+++||+++|..||.+.+.
T Consensus       226 ~~~DiwSlGvilyelltG~~Pf~~~~~  252 (370)
T cd05596         226 RECDWWSVGVFLYEMLVGDTPFYADSL  252 (370)
T ss_pred             CceeeeehhHHHHHHHhCCCCcCCCCH
Confidence            899999999999999999999987653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=7e-26  Score=141.43  Aligned_cols=97  Identities=27%  Similarity=0.509  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++..........  ....+++.|++||.+.+..++.++|
T Consensus       105 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~D  179 (280)
T cd05608         105 QIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT--KGYAGTPGFMAPELLQGEEYDFSVD  179 (280)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccc--cccCCCcCccCHHHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999986554332211  1235788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|+.||....
T Consensus       180 vwslG~il~el~~g~~pf~~~~  201 (280)
T cd05608         180 YFALGVTLYEMIAARGPFRARG  201 (280)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.7e-26  Score=147.22  Aligned_cols=96  Identities=25%  Similarity=0.373  Sum_probs=83.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.....     ......|++.|+|||.+.+..++.++|
T Consensus       109 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (333)
T cd05600         109 EMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVD  180 (333)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccc
Confidence            7889999999   89999999999999999999999999999865433     112235888999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++||+++|..||.+.+..
T Consensus       181 vwslG~il~ell~g~~pf~~~~~~  204 (333)
T cd05600         181 YWSLGCMLYEFLCGFPPFSGSTPN  204 (333)
T ss_pred             eecchHHHhhhhhCCCCCCCCCHH
Confidence            999999999999999999876543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.93  E-value=9.5e-26  Score=142.74  Aligned_cols=99  Identities=19%  Similarity=0.338  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE----CCCCceEEecccccccCCCCCc-ceecccccccccccccceeccC-C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGET-HIKDAIPIGIMGFVATEYVTTG-D   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~-~   75 (110)
                      |++.|+.|||   +.+++||||||.||++    +..+.++++|||++........ ........+++.|+|||++.+. .
T Consensus       116 qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (317)
T cd07868         116 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  192 (317)
T ss_pred             HHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCC
Confidence            7899999999   8999999999999999    4557899999999876543221 1112233578889999998764 4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++.++|+||+|++++++++|+.||....
T Consensus       193 ~~~~~DiwslG~il~el~~g~~~f~~~~  220 (317)
T cd07868         193 YTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence            7889999999999999999999996543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=3.9e-26  Score=145.50  Aligned_cols=94  Identities=28%  Similarity=0.528  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....|++.|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (329)
T cd05618         104 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVD  178 (329)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc--cccccCCccccCHHHHcCCCCCCccc
Confidence            7889999999   899999999999999999999999999998643221111  12235788999999999888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~  100 (110)
                      +||+|+++|++++|..||.
T Consensus       179 iwslG~il~el~~g~~Pf~  197 (329)
T cd05618         179 WWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             eecccHHHHHHhhCCCCCc
Confidence            9999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=5.4e-26  Score=144.82  Aligned_cols=95  Identities=27%  Similarity=0.527  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++.......  ......|++.|+|||++.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (329)
T cd05588         104 EISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVD  178 (329)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--ccccccCCccccCHHHHcCCCCCCccc
Confidence            7889999999   89999999999999999999999999999864322111  112235888999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||+|+++|++++|..||..
T Consensus       179 iwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         179 WWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             eechHHHHHHHHHCCCCccc
Confidence            99999999999999999963

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.93  E-value=7.8e-27  Score=150.83  Aligned_cols=101  Identities=28%  Similarity=0.441  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCC-------------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-------------------------------   50 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~-------------------------------   50 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++......                               
T Consensus       109 qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (376)
T cd05598         109 ELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRL  185 (376)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccc
Confidence            7889999999   899999999999999999999999999987422100                               


Q ss_pred             ----------CcceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           51 ----------ETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        51 ----------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                                ..........|++.|+|||++....++.++|+||+||++|++++|..||.+.+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~  250 (376)
T cd05598         186 KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA  250 (376)
T ss_pred             cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH
Confidence                      0000011235888999999998888999999999999999999999999876643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=8.2e-26  Score=145.01  Aligned_cols=100  Identities=29%  Similarity=0.449  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceecc--CCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTT--GDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~--~~~~   77 (110)
                      ++++||.|||   .+|.||||+|+.|||++++|.++++|||+.-.+.......  +.....|++.||+||++..  ..|+
T Consensus       134 e~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYd  210 (516)
T KOG0582|consen  134 EVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYD  210 (516)
T ss_pred             HHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCcc
Confidence            5788999999   8999999999999999999999999999865443322111  1134579999999999543  3588


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||||+...|+.+|+.||+.-.+
T Consensus       211 fKaDIwSfGITA~ELA~G~aPf~k~pP  237 (516)
T KOG0582|consen  211 FKADIWSFGITACELAHGHAPFSKYPP  237 (516)
T ss_pred             chhhhhhhhHHHHHHhcCCCCcccCCh
Confidence            999999999999999999999976543

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.93  E-value=9.7e-27  Score=149.72  Aligned_cols=101  Identities=24%  Similarity=0.425  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc-----------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET-----------------------------   52 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-----------------------------   52 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........                             
T Consensus       109 qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (360)
T cd05627         109 ETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETW  185 (360)
T ss_pred             HHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccc
Confidence            6889999999   89999999999999999999999999998764321100                             


Q ss_pred             ----ceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           53 ----HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        53 ----~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                          ........|++.|+|||++.+..++.++|+||+||++||+++|..||.+.++.
T Consensus       186 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~  242 (360)
T cd05627         186 KKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQ  242 (360)
T ss_pred             cccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHH
Confidence                00011235888999999998888999999999999999999999999876653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=1e-25  Score=142.99  Aligned_cols=98  Identities=29%  Similarity=0.511  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.........  .....+++.|++||.+.+..++.++|
T Consensus       104 qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~D  178 (318)
T cd05570         104 EIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT--TSTFCGTPDYIAPEILSYQPYGPAVD  178 (318)
T ss_pred             HHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCc--ccceecCccccCHHHhcCCCCCcchh
Confidence            7899999999   899999999999999999999999999988643221111  11225788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       179 iwslGvil~~l~~G~~pf~~~~~  201 (318)
T cd05570         179 WWALGVLLYEMLAGQSPFEGDDE  201 (318)
T ss_pred             hhhHHHHHHHHhhCCCCCCCCCH
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.93  E-value=1.1e-25  Score=142.57  Aligned_cols=100  Identities=27%  Similarity=0.403  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++................+..|++||.+....++.++|
T Consensus       117 qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  193 (316)
T cd05108         117 QIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSD  193 (316)
T ss_pred             HHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654332222212223456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+...
T Consensus       194 i~slGv~l~el~t~g~~p~~~~~~  217 (316)
T cd05108         194 VWSYGVTVWELMTFGSKPYDGIPA  217 (316)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=2.7e-26  Score=146.85  Aligned_cols=100  Identities=28%  Similarity=0.479  Sum_probs=84.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC---------------------------cce
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---------------------------THI   54 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------~~~   54 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++.......                           ...
T Consensus       109 qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
T cd05573         109 ELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRV  185 (350)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccc
Confidence            7899999999   8999999999999999999999999999987554322                           001


Q ss_pred             ecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           55 KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        55 ~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ......|++.|+|||.+....++.++|+||+|+++|++++|..||...+.
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~  235 (350)
T cd05573         186 RANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL  235 (350)
T ss_pred             cccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence            12233588899999999988899999999999999999999999977653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=1e-25  Score=145.79  Aligned_cols=100  Identities=22%  Similarity=0.413  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................++..|+|||.+....++.++|
T Consensus       220 qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  296 (374)
T cd05106         220 QVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSD  296 (374)
T ss_pred             HHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCcccc
Confidence            6889999999   8999999999999999999999999999987554322211112223456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.....
T Consensus       297 vwSlGvil~ellt~G~~Pf~~~~~  320 (374)
T cd05106         297 VWSYGILLWEIFSLGKSPYPGILV  320 (374)
T ss_pred             HHHHHHHHHHHHhCCCCCCccccc
Confidence            9999999999997 9999976543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.92  E-value=3.9e-26  Score=145.60  Aligned_cols=99  Identities=24%  Similarity=0.472  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++......... ......|++.|++||++..     ..+
T Consensus       110 qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (332)
T cd05623         110 EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-QSSVAVGTPDYISPEILQAMEDGKGKY  185 (332)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc-eecccccCccccCHHHHhccccCCCCC
Confidence            6889999999   899999999999999999999999999998654322221 1122358889999998862     346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|+++||+++|+.||...+.
T Consensus       186 ~~~~DvwSlGvil~ell~g~~Pf~~~~~  213 (332)
T cd05623         186 GPECDWWSLGVCMYEMLYGETPFYAESL  213 (332)
T ss_pred             CCcCCEEeeHHHHHHHhcCCCCCCCCCH
Confidence            7899999999999999999999976643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.92  E-value=1.9e-25  Score=142.83  Aligned_cols=99  Identities=26%  Similarity=0.465  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       181 qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  257 (337)
T cd05054         181 QVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSD  257 (337)
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999987654333222222334566799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++|+++ |..||.+..
T Consensus       258 i~SlGv~l~el~t~g~~p~~~~~  280 (337)
T cd05054         258 VWSFGVLLWEIFSLGASPYPGVQ  280 (337)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999997 999997643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=2.2e-25  Score=142.54  Aligned_cols=94  Identities=27%  Similarity=0.485  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........     ...+++.|+|||.+.+ ..++.++
T Consensus       126 qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07878         126 QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMT-----GYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecCCCcC-----CccccccccCchHhcCCccCCchh
Confidence            7899999999   89999999999999999999999999999876543221     2257888999999876 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       198 DiwslG~il~el~~g~~pf~~~~  220 (343)
T cd07878         198 DIWSVGCIMAELLKGKALFPGND  220 (343)
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.2e-26  Score=147.71  Aligned_cols=98  Identities=26%  Similarity=0.427  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      ||+.|++|||   +.+++||||||+||+++.++.++++|||++.........  .....|+..|+|||.+... .++.++
T Consensus       104 qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~  178 (330)
T cd05586         104 ELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHV  178 (330)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCcc
Confidence            7899999999   899999999999999999999999999998653222111  1223588899999988654 478899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|+++|++++|..||.+.+.
T Consensus       179 DvwslGvil~elltG~~Pf~~~~~  202 (330)
T cd05586         179 DFWSLGVLVFEMCCGWSPFYAEDT  202 (330)
T ss_pred             ceeccccEEEEeccCCCCCCCCCH
Confidence            999999999999999999976553

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.92  E-value=2.7e-25  Score=138.68  Aligned_cols=100  Identities=23%  Similarity=0.425  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||+++...............++..|++||......++.++|
T Consensus       117 qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  193 (279)
T cd05111         117 QIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSD  193 (279)
T ss_pred             HHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhh
Confidence            7889999999   8999999999999999999999999999987654332222222224566799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+...
T Consensus       194 v~slG~il~el~t~g~~p~~~~~~  217 (279)
T cd05111         194 VWSYGVTVWEMMSYGAEPYAGMRP  217 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 9999977644

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.92  E-value=3.3e-26  Score=145.92  Aligned_cols=99  Identities=23%  Similarity=0.457  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.......... .....|++.|+|||++..     ..+
T Consensus       110 qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (331)
T cd05624         110 EMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ-SSVAVGTPDYISPEILQAMEDGMGKY  185 (331)
T ss_pred             HHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee-eccccCCcccCCHHHHhccccCCCCC
Confidence            7889999999   8999999999999999999999999999987654322211 122358889999998865     456


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|+++|++++|..||.+.+.
T Consensus       186 ~~~~DiwSlGvil~ell~g~~Pf~~~~~  213 (331)
T cd05624         186 GPECDWWSLGVCMYEMLYGETPFYAESL  213 (331)
T ss_pred             CCcccEEeeehhhhhhhhCCCCccCCCH
Confidence            7889999999999999999999976543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.92  E-value=2.4e-25  Score=138.79  Aligned_cols=100  Identities=22%  Similarity=0.385  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       132 ~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  208 (283)
T cd05048         132 QIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESD  208 (283)
T ss_pred             HHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhh
Confidence            6889999999   8999999999999999999999999999987553322222222224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++||+++ |..||.+.+.
T Consensus       209 v~slG~il~el~~~g~~p~~~~~~  232 (283)
T cd05048         209 IWSFGVVLWEIFSYGLQPYYGFSN  232 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 9999876544

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1e-25  Score=143.68  Aligned_cols=98  Identities=23%  Similarity=0.457  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.......... .....|++.|++||++..     ..+
T Consensus       110 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (331)
T cd05597         110 EMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ-SNVAVGTPDYISPEILQAMEDGKGRY  185 (331)
T ss_pred             HHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc-ccceeccccccCHHHHhhccccccCC
Confidence            7899999999   8999999999999999999999999999986544322211 112258889999999863     346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|+++|++++|+.||.+.+
T Consensus       186 ~~~~DiwslG~~l~el~~g~~Pf~~~~  212 (331)
T cd05597         186 GPECDWWSLGVCMYEMLYGETPFYAES  212 (331)
T ss_pred             CCcceeehhhhHHHHHhhCCCCCCCCC
Confidence            788999999999999999999997654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=3.6e-25  Score=147.74  Aligned_cols=94  Identities=23%  Similarity=0.360  Sum_probs=79.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++........... ....|+..|++||++.+..++.++|
T Consensus       275 ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~D  350 (501)
T PHA03210        275 QLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFD-YGWVGTVATNSPEILAGDGYCEITD  350 (501)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCccccccc-ccccCCcCCCCchhhcCCCCCcHHH
Confidence            7889999999   89999999999999999999999999999876543322211 1235888999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCc
Q 043407           82 VFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~   99 (110)
                      +||+|+++||+++|..++
T Consensus       351 iwSlGvil~ell~~~~~p  368 (501)
T PHA03210        351 IWSCGLILLDMLSHDFCP  368 (501)
T ss_pred             HHHHHHHHHHHHHCCCCC
Confidence            999999999999987543

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=2e-25  Score=144.21  Aligned_cols=100  Identities=25%  Similarity=0.387  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++.......... .....+++.|++||.+.+.. ++.++
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~  186 (372)
T cd07853         111 QILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKH-MTQEVVTQYYRAPEILMGSRHYTSAV  186 (372)
T ss_pred             HHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCcccc-CCCCCcCCCcCCHHHHcCCCCCCcHH
Confidence            7889999999   8999999999999999999999999999987543222111 11224677899999987644 68899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|++++|+++|+.||.+.++.
T Consensus       187 DiwslG~il~el~~g~~pf~~~~~~  211 (372)
T cd07853         187 DIWSVGCIFAELLGRRILFQAQSPI  211 (372)
T ss_pred             HHHhHHHHHHHHHcCCCCCCCCCHH
Confidence            9999999999999999999876543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.92  E-value=3.2e-25  Score=140.19  Aligned_cols=98  Identities=19%  Similarity=0.338  Sum_probs=79.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE----CCCCceEEecccccccCCCCCcc-eecccccccccccccceeccC-C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTG-D   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~-~   75 (110)
                      |++.||.|||   +.+++||||||+||++    +.++.++++|||+++........ .......+++.|+|||++.+. .
T Consensus       116 qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (317)
T cd07867         116 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  192 (317)
T ss_pred             HHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCc
Confidence            7899999999   8999999999999999    45678999999998765432211 111223578889999998764 4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++.++|+||+|++++|+++|..||...
T Consensus       193 ~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         193 YTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            788999999999999999999999654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.92  E-value=3.4e-25  Score=138.06  Aligned_cols=99  Identities=25%  Similarity=0.380  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||+||+++.++.++++|||+++...............++..|++||......++.++|
T Consensus       117 qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (279)
T cd05109         117 QIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSD  193 (279)
T ss_pred             HHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhH
Confidence            7899999999   8999999999999999999999999999987664332221111112456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||+++||+++ |..||....
T Consensus       194 i~slG~~l~el~t~g~~p~~~~~  216 (279)
T cd05109         194 VWSYGVTVWELMTFGAKPYDGIP  216 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCC
Confidence            9999999999998 899987644

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.92  E-value=2.1e-25  Score=139.18  Aligned_cols=100  Identities=18%  Similarity=0.322  Sum_probs=82.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|+|   +.+++||||||.||+++.++.++++|||+++...............+++.|++||.+....++.++|
T Consensus       132 ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  208 (283)
T cd05091         132 QIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSD  208 (283)
T ss_pred             HHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchh
Confidence            7889999999   8999999999999999999999999999987654332222222224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++|+++ |..||.+.+.
T Consensus       209 v~slG~~l~el~~~g~~p~~~~~~  232 (283)
T cd05091         209 IWSYGVVLWEVFSYGLQPYCGYSN  232 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 8888876544

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.92  E-value=2.5e-25  Score=139.03  Aligned_cols=96  Identities=22%  Similarity=0.333  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........   .....++..|+|||.+.+..++.++|
T Consensus       116 qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (288)
T cd07863         116 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVD  189 (288)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccccCccc---CCCccccccccCchHhhCCCCCCcch
Confidence            7889999999   89999999999999999999999999999865532211   11224677899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+.+
T Consensus       190 iwslG~~l~~l~~g~~~f~~~~  211 (288)
T cd07863         190 MWSVGCIFAEMFRRKPLFCGNS  211 (288)
T ss_pred             hhhHHHHHHHHHhCCcCcCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.92  E-value=7.3e-26  Score=133.76  Aligned_cols=95  Identities=24%  Similarity=0.453  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc----CCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT----GDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~~   77 (110)
                      .++.||.|||+  +..+||||+||.|||++..|.+|++|||.+-...+.-..   ....|+..|||||.+..    ..|+
T Consensus       156 Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk---t~daGCkpYmaPEri~~e~n~~gY~  230 (282)
T KOG0984|consen  156 SVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK---TMDAGCKPYMAPERINPELNQKGYS  230 (282)
T ss_pred             HHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH---HHhcCCCccCChhhcCcccCcccce
Confidence            46789999997  679999999999999999999999999987654332111   11258889999999854    3588


Q ss_pred             chhhHHHHHHHHHHHHhCCCCccc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .++|+||+|+.+.|+.+++.||..
T Consensus       231 vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  231 VKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             eehhhhhhhhhhhhhhhccccccc
Confidence            999999999999999999999854

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.92  E-value=4.5e-26  Score=145.06  Aligned_cols=99  Identities=26%  Similarity=0.490  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec------cCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT------TGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~------~~~   75 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++......... ......+++.|+|||++.      ...
T Consensus       110 qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  185 (330)
T cd05601         110 ELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGT  185 (330)
T ss_pred             HHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCC
Confidence            7899999999   899999999999999999999999999998765433222 222235788999999986      345


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|+++|++++|..||...+.
T Consensus       186 ~~~~~DiwslG~il~el~~g~~Pf~~~~~  214 (330)
T cd05601         186 YGVECDWWSLGVIAYEMIYGRSPFHEGTS  214 (330)
T ss_pred             CCCcceeecccceeeeeccCCCCCCCCCH
Confidence            67889999999999999999999976543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.92  E-value=4.5e-25  Score=146.01  Aligned_cols=96  Identities=31%  Similarity=0.562  Sum_probs=84.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE-CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   ..+++|||+||.||++ ++.+.++++|||.++.....     ...++-+..|.|||++....++.++
T Consensus       423 ~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~ac  494 (612)
T KOG0603|consen  423 ELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEAC  494 (612)
T ss_pred             HHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcch
Confidence            6789999999   8999999999999999 58899999999999876544     2233567789999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++|+|++|+.||......
T Consensus       495 D~WSLGvlLy~ML~G~tp~~~~P~~  519 (612)
T KOG0603|consen  495 DWWSLGVLLYEMLTGRTLFAAHPAG  519 (612)
T ss_pred             hhHHHHHHHHHHHhCCCccccCCch
Confidence            9999999999999999999876554

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.92  E-value=5.3e-25  Score=136.51  Aligned_cols=100  Identities=26%  Similarity=0.439  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................+++.|++||......++.++|
T Consensus       120 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  196 (272)
T cd05075         120 DIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSD  196 (272)
T ss_pred             HHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHH
Confidence            6889999999   8999999999999999999999999999987654332222222223556799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.+.+.
T Consensus       197 i~slG~il~el~~~g~~p~~~~~~  220 (272)
T cd05075         197 VWSFGVTMWEIATRGQTPYPGVEN  220 (272)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 8899976543

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.92  E-value=7.9e-25  Score=136.52  Aligned_cols=95  Identities=25%  Similarity=0.473  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++.........   ....++..|++||.+....++.++|
T Consensus       103 qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  176 (277)
T cd05607         103 QITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTI---TQRAGTNGYMAPEILKEEPYSYPVD  176 (277)
T ss_pred             HHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCcee---eccCCCCCccCHHHHccCCCCCchh
Confidence            7889999999   899999999999999999999999999998765432211   1225778999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||+|+++|++++|..||...
T Consensus       177 vwslGv~l~el~~g~~p~~~~  197 (277)
T cd05607         177 WFAMGCSIYEMVAGRTPFKDH  197 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=7.7e-26  Score=157.30  Aligned_cols=104  Identities=28%  Similarity=0.475  Sum_probs=88.5

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      +||++|+.||+   ++.+|||||..+|.|++....+|++|||+++..-....+.+...-.-+.+|||||.+....|+.++
T Consensus       809 ~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskS  885 (1025)
T KOG1095|consen  809 LDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKS  885 (1025)
T ss_pred             HHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhccccccc
Confidence            47899999999   899999999999999999999999999999855444444333322334689999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcccc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAGDR  107 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~~~  107 (110)
                      |+||||+++||+++ |..||.+.+..++
T Consensus       886 DvWsFGVllWEifslG~~PY~~~~n~~v  913 (1025)
T KOG1095|consen  886 DVWSFGVLLWEIFSLGATPYPSRSNFEV  913 (1025)
T ss_pred             chhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence            99999999999998 9999998876654

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.92  E-value=8.5e-25  Score=139.42  Aligned_cols=96  Identities=24%  Similarity=0.411  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||.  ..+++|+||||.||+++.++.++++|||++........    ....+++.|++||.+.+..++.++|
T Consensus       111 ~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~~D  184 (331)
T cd06649         111 AVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSD  184 (331)
T ss_pred             HHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccccccc----ccCCCCcCcCCHhHhcCCCCCchHh
Confidence            68899999993  24699999999999999999999999999865533211    1225788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|+.||...+
T Consensus       185 iwslG~il~el~tg~~p~~~~~  206 (331)
T cd06649         185 IWSMGLSLVELAIGRYPIPPPD  206 (331)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997543

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=5.9e-26  Score=146.54  Aligned_cols=100  Identities=25%  Similarity=0.435  Sum_probs=89.3

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      +|++.|+.|||   +..|+|||||+.||++..++.+++.|||+++.+.......  .+..|++.||+||++.+.+|..++
T Consensus       113 ~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a--~tvvGTp~YmcPEil~d~pYn~KS  187 (426)
T KOG0589|consen  113 VQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA--STVVGTPYYMCPEILSDIPYNEKS  187 (426)
T ss_pred             HHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh--heecCCCcccCHHHhCCCCCCccC
Confidence            58999999999   8999999999999999999999999999999886554222  334799999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+||++||+.+=+.+|.+.+..
T Consensus       188 DiWsLGC~~yEm~~lk~aF~a~~m~  212 (426)
T KOG0589|consen  188 DIWSLGCCLYEMCTLKPAFKASNMS  212 (426)
T ss_pred             cchhhcchHHHHHhcccccCccchH
Confidence            9999999999999999999877654

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=6.4e-25  Score=145.13  Aligned_cols=94  Identities=19%  Similarity=0.232  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++|+|||+++...............|+..|++||++.+..++.++|
T Consensus       268 qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sD  344 (461)
T PHA03211        268 QLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVD  344 (461)
T ss_pred             HHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHH
Confidence            7889999999   8999999999999999999999999999987543322111112235889999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 043407           82 VFSFGVLLLVLLTGQKL   98 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p   98 (110)
                      +||||+++||+++|..+
T Consensus       345 vwSlGviL~El~~g~~~  361 (461)
T PHA03211        345 IWSAGLVIFEAAVHTAS  361 (461)
T ss_pred             HHHHHHHHHHHHHcCCC
Confidence            99999999999987754

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.92  E-value=5.8e-25  Score=138.87  Aligned_cols=98  Identities=20%  Similarity=0.404  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++..........  ....+++.|++||.+.+ ..++.++
T Consensus       112 qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  186 (309)
T cd07872         112 QILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY--SNEVVTLWYRPPDVLLGSSEYSTQI  186 (309)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc--ccccccccccCCHHHhCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999986543222111  12246778999998865 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       187 DiwslG~il~el~tg~~pf~~~~~  210 (309)
T cd07872         187 DMWGVGCIFFEMASGRPLFPGSTV  210 (309)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999977654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3.5e-25  Score=138.56  Aligned_cols=98  Identities=29%  Similarity=0.491  Sum_probs=86.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +|++||.|||   +++|+.||+|..|.+++.+|.+|+.|||+|+..-...  ....+.+|+|.|+|||++...+|+.++|
T Consensus       276 EIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g--~t~kTFCGTPEYLAPEVleDnDYgraVD  350 (516)
T KOG0690|consen  276 EIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG--DTTKTFCGTPEYLAPEVLEDNDYGRAVD  350 (516)
T ss_pred             HHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccccc--ceeccccCChhhcCchhhccccccceee
Confidence            5889999999   7999999999999999999999999999998643322  2334558999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .|.+|+++|||+.|+.||...+.
T Consensus       351 WWG~GVVMYEMmCGRLPFyn~dh  373 (516)
T KOG0690|consen  351 WWGVGVVMYEMMCGRLPFYNKDH  373 (516)
T ss_pred             hhhhhHHHHHHHhccCcccccch
Confidence            99999999999999999976554

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.92  E-value=1e-24  Score=140.09  Aligned_cols=96  Identities=25%  Similarity=0.454  Sum_probs=78.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-----CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-----DY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-----~~   76 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++.........  .....|+..|++||++...     ..
T Consensus       176 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~  250 (353)
T PLN00034        176 QILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP--CNSSVGTIAYMSPERINTDLNHGAYD  250 (353)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc--ccccccCccccCccccccccccCcCC
Confidence            7889999999   899999999999999999999999999998765322111  1123578899999987432     23


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +.++|+||||+++||+++|+.||...
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~  276 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVG  276 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCC
Confidence            46899999999999999999999743

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.92  E-value=6.4e-25  Score=138.35  Aligned_cols=99  Identities=22%  Similarity=0.385  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       146 ~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (304)
T cd05096         146 QIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASD  222 (304)
T ss_pred             HHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhh
Confidence            6889999999   8999999999999999999999999999987553322222222223567899999998888999999


Q ss_pred             HHHHHHHHHHHHh--CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT--GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~--g~~p~~~~~  103 (110)
                      +||||+++|++++  +..||...+
T Consensus       223 v~slG~~l~el~~~~~~~p~~~~~  246 (304)
T cd05096         223 VWAFGVTLWEILMLCKEQPYGELT  246 (304)
T ss_pred             hHHHHHHHHHHHHccCCCCCCcCC
Confidence            9999999999986  556776543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=3.2e-25  Score=142.04  Aligned_cols=98  Identities=28%  Similarity=0.442  Sum_probs=87.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      ||.+|+.|||   +++++|||||..||++|.++.+|++|||++..+...+..   .+.+|++-|.+||++.+.+| ++.+
T Consensus       161 QIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL---qTFCGSPLYASPEIvNG~PY~GPEV  234 (668)
T KOG0611|consen  161 QIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL---QTFCGSPLYASPEIVNGTPYKGPEV  234 (668)
T ss_pred             HHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccccHH---HHhcCCcccCCccccCCCCCCCCcc
Confidence            7999999999   899999999999999999999999999999877654432   24479999999999999987 5889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |.||+|+++|.++.|.+||.|.+..
T Consensus       235 DsWsLGvLLYtLVyGtMPFDG~Dhk  259 (668)
T KOG0611|consen  235 DSWSLGVLLYTLVYGTMPFDGRDHK  259 (668)
T ss_pred             chhhHHHHHHHHhhcccccCCchHH
Confidence            9999999999999999999987653

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.91  E-value=1.2e-24  Score=136.16  Aligned_cols=100  Identities=19%  Similarity=0.348  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       128 ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  204 (288)
T cd05093         128 QIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  204 (288)
T ss_pred             HHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhh
Confidence            6889999999   8999999999999999999999999999987553322222222223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||++++++++ |..||...+.
T Consensus       205 iwslG~il~~l~t~g~~p~~~~~~  228 (288)
T cd05093         205 VWSLGVVLWEIFTYGKQPWYQLSN  228 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 8999876543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.91  E-value=1.7e-24  Score=135.67  Aligned_cols=99  Identities=19%  Similarity=0.362  Sum_probs=82.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +++++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       131 ~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  207 (291)
T cd05094         131 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  207 (291)
T ss_pred             HHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhh
Confidence            6889999999   8999999999999999999999999999987554332222222224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||...+
T Consensus       208 i~slG~il~el~t~g~~p~~~~~  230 (291)
T cd05094         208 VWSFGVILWEIFTYGKQPWFQLS  230 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999998 999986544

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.91  E-value=6.9e-26  Score=143.66  Aligned_cols=98  Identities=33%  Similarity=0.482  Sum_probs=83.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.........  .....|++.|++||.+....++.++|
T Consensus       106 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~D  180 (318)
T cd05582         106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSAD  180 (318)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc--eecccCChhhcCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998654332111  12235788999999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       181 iwslG~il~el~tg~~p~~~~~~  203 (318)
T cd05582         181 WWSFGVLMFEMLTGSLPFQGKDR  203 (318)
T ss_pred             eeccceEeeeeccCCCCCCCCCH
Confidence            99999999999999999987654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.2e-24  Score=134.78  Aligned_cols=100  Identities=27%  Similarity=0.423  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|+||.||++++++.++++|||+++................+..|++||.+....++.++|
T Consensus       121 ~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  197 (273)
T cd05035         121 DIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSD  197 (273)
T ss_pred             HHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccc
Confidence            6889999999   8999999999999999999999999999987654332222212223455799999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++|+++ |..||.+.+.
T Consensus       198 v~SlG~il~el~~~g~~p~~~~~~  221 (273)
T cd05035         198 VWAFGVTMWEIATRGQTPYPGVEN  221 (273)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 8899876543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.91  E-value=1e-24  Score=135.76  Aligned_cols=100  Identities=25%  Similarity=0.406  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       127 ~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (277)
T cd05062         127 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  203 (277)
T ss_pred             HHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhH
Confidence            6889999999   7899999999999999999999999999986544322222222223466799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||++++|+++ |..||.+.+.
T Consensus       204 i~slG~~l~el~~~~~~p~~~~~~  227 (277)
T cd05062         204 VWSFGVVLWEIATLAEQPYQGMSN  227 (277)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 7888876543

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.4e-24  Score=135.93  Aligned_cols=97  Identities=30%  Similarity=0.519  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++.........   ....++..|++||.+....++.++|
T Consensus       110 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05605         110 EITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI---RGRVGTVGYMAPEVVKNERYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc---ccccCCCCccCcHHhcCCCCCcccc
Confidence            7889999999   789999999999999999999999999998765432221   1225778999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       184 iws~G~~l~el~~g~~pf~~~~~  206 (285)
T cd05605         184 WWGLGCLIYEMIEGKSPFRQRKE  206 (285)
T ss_pred             chhHHHHHHHHHHCCCCCCCCch
Confidence            99999999999999999987544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.91  E-value=1.2e-24  Score=140.79  Aligned_cols=99  Identities=21%  Similarity=0.414  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       222 qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  298 (375)
T cd05104         222 QVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  298 (375)
T ss_pred             HHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCC
Confidence            7899999999   8999999999999999999999999999987654322211111223455799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||++++|+++ |..||....
T Consensus       299 i~slG~~l~ellt~g~~p~~~~~  321 (375)
T cd05104         299 VWSYGILLWEIFSLGSSPYPGMP  321 (375)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999998 888986543

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.91  E-value=1.5e-24  Score=150.86  Aligned_cols=100  Identities=20%  Similarity=0.295  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc----------------ceecccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET----------------HIKDAIPIGIMGF   65 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~----------------~~~~~~~~~~~~~   65 (110)
                      |++.|++|||   +.+++||||||+||+++.++.++++|||++........                ........|++.|
T Consensus       121 QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~Y  197 (932)
T PRK13184        121 KICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDY  197 (932)
T ss_pred             HHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCC
Confidence            6889999999   78999999999999999999999999999875421100                0001123588999


Q ss_pred             cccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           66 VATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        66 ~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|||.+.+..++.++|+||+|++++|+++|..||...+.
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~  236 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG  236 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence            999999888899999999999999999999999976544

>PHA02988 hypothetical protein; Provisional

Probab=99.91  E-value=8.8e-25  Score=136.82  Aligned_cols=97  Identities=20%  Similarity=0.279  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc--CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~   79 (110)
                      |++.|+.|||.  ..+++||||||.|++++.++.++++|||+++.......     ...++..|+|||.+..  ..++.+
T Consensus       130 ~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~k  202 (283)
T PHA02988        130 DCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-----KNVNFMVYFSYKMLNDIFSEYTIK  202 (283)
T ss_pred             HHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc-----cccCcccccCHHHhhhccccccch
Confidence            68899999993  24788999999999999999999999999875543221     2256778999999865  578899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||||+++||+++|..||.+.+..
T Consensus       203 ~Di~SlGvil~el~~g~~Pf~~~~~~  228 (283)
T PHA02988        203 DDIYSLGVVLWEIFTGKIPFENLTTK  228 (283)
T ss_pred             hhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence            99999999999999999999876543

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=3.5e-24  Score=136.42  Aligned_cols=102  Identities=26%  Similarity=0.415  Sum_probs=84.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCC--------------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD--------------------------------   49 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~--------------------------------   49 (110)
                      +++.||+|||   -.|||.|||||+|||+..+|.++++||.++...+.                                
T Consensus       187 Evl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~  263 (459)
T KOG0610|consen  187 EVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCL  263 (459)
T ss_pred             HHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchh
Confidence            5778999999   89999999999999999999999999988643210                                


Q ss_pred             -CCc---------------------ceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           50 -GET---------------------HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        50 -~~~---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                       ...                     ..+.....||-.|.|||++.+...+.++|.|+||+++|||+.|..||.|.+..+
T Consensus       264 ~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~  342 (459)
T KOG0610|consen  264 SSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE  342 (459)
T ss_pred             ccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh
Confidence             000                     011123457888999999999999999999999999999999999999987654

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.91  E-value=2.3e-24  Score=135.87  Aligned_cols=99  Identities=25%  Similarity=0.408  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+.+..++.++|
T Consensus       117 qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (303)
T cd05110         117 QIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD  193 (303)
T ss_pred             HHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHH
Confidence            7889999999   8999999999999999999999999999987654332222222223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||+++||+++ |..||.+..
T Consensus       194 iwslG~~l~el~t~g~~p~~~~~  216 (303)
T cd05110         194 VWSYGVTIWELMTFGGKPYDGIP  216 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999997 889987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=5.9e-25  Score=142.12  Aligned_cols=101  Identities=29%  Similarity=0.463  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC---cceecccccccccccccceeccCC---
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIPIGIMGFVATEYVTTGD---   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~~~~pe~~~~~~---   75 (110)
                      +++.||+|||   ..+||||||||.|+|+++++.+|++|||++..++...   .........||+.|+|||......   
T Consensus       218 Dvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~  294 (576)
T KOG0585|consen  218 DVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFS  294 (576)
T ss_pred             HHHHHHHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCcc
Confidence            4678999999   8999999999999999999999999999987653221   111112246999999999987733   


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           76 -YNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        76 -~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                       -+.+.|+||+|+.+|-++-|+.||-++...
T Consensus       295 ~~g~a~DiWalGVTLYCllfG~~PF~~~~~~  325 (576)
T KOG0585|consen  295 YSGFALDIWALGVTLYCLLFGQLPFFDDFEL  325 (576)
T ss_pred             ccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence             247789999999999999999999876543

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.91  E-value=3.1e-24  Score=133.54  Aligned_cols=100  Identities=21%  Similarity=0.351  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||++................++..|+|||++....++.++|
T Consensus       130 ~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05049         130 QIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhh
Confidence            6889999999   8899999999999999999999999999886543222111112223456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||...+.
T Consensus       207 i~slG~il~e~~~~g~~p~~~~~~  230 (280)
T cd05049         207 VWSFGVVLWEIFTYGKQPWYGLSN  230 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999998 9999865543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=3.1e-25  Score=150.33  Aligned_cols=104  Identities=23%  Similarity=0.387  Sum_probs=89.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.||-   ++.++||||..+|.++..+..+||+|||+++..-+...++-.....-+.+||+||.+..++|+.++|
T Consensus       611 QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSD  687 (774)
T KOG1026|consen  611 QIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESD  687 (774)
T ss_pred             HHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhh
Confidence            8999999999   8999999999999999999999999999998665444444332224567899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGDRH  108 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~~~  108 (110)
                      +||||+++||+++ |..||.+-..++++
T Consensus       688 VWs~GVvLWEIFsyG~QPy~glSn~EVI  715 (774)
T KOG1026|consen  688 VWSFGVVLWEIFSYGKQPYYGLSNQEVI  715 (774)
T ss_pred             hhhhhhhhhhhhccccCcccccchHHHH
Confidence            9999999999998 99999887766653

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.91  E-value=2.9e-24  Score=135.37  Aligned_cols=100  Identities=25%  Similarity=0.398  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||+++...............++..|++||.+....++.++|
T Consensus       145 qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         145 QVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             HHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999987664332222222223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~~  245 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIPV  245 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCH
Confidence            9999999999998 7888865543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.91  E-value=2.9e-24  Score=134.49  Aligned_cols=96  Identities=30%  Similarity=0.542  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||++.........   ....++..|+|||.+....++.++|
T Consensus       110 qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05630         110 EICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGYMAPEVVKNERYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc---cCCCCCccccChHHHcCCCCCCccc
Confidence            6889999999   899999999999999999999999999988654432221   1225788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|..||....
T Consensus       184 iwslG~~l~~l~~g~~Pf~~~~  205 (285)
T cd05630         184 WWALGCLLYEMIAGQSPFQQRK  205 (285)
T ss_pred             cHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.91  E-value=2.3e-24  Score=133.61  Aligned_cols=100  Identities=23%  Similarity=0.325  Sum_probs=78.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-------C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-------G   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-------~   74 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++................++..|++||++..       .
T Consensus       108 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (269)
T cd05042         108 EVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPK  184 (269)
T ss_pred             HHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccccccc
Confidence            7889999999   89999999999999999999999999999865433221111122234567999998643       3


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           75 DYNEKCDVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      ..+.++|+||+|+++||+++ |..||...+.
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  215 (269)
T cd05042         185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSD  215 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence            45788999999999999998 7888876543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=3.7e-24  Score=133.94  Aligned_cols=96  Identities=28%  Similarity=0.498  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........   ....++..|++||.+.+..++.++|
T Consensus       110 ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~D  183 (285)
T cd05632         110 EILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI---RGRVGTVGYMAPEVLNNQRYTLSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc---cCCCCCcCccChHHhcCCCCCcccc
Confidence            7889999999   899999999999999999999999999988654432221   1225788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+..
T Consensus       184 i~slG~~l~~l~~g~~P~~~~~  205 (285)
T cd05632         184 YWGLGCLIYEMIEGQSPFRGRK  205 (285)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.91  E-value=2.9e-24  Score=134.07  Aligned_cols=99  Identities=23%  Similarity=0.383  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       132 ~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  208 (283)
T cd05090         132 QIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSD  208 (283)
T ss_pred             HHHHHHHHHH---hcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhh
Confidence            6889999999   8899999999999999999999999999987654322222222223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++|+++ |..||.+.+
T Consensus       209 v~slG~il~el~~~g~~p~~~~~  231 (283)
T cd05090         209 IWSFGVVLWEIFSFGLQPYYGFS  231 (283)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCC
Confidence            9999999999998 888986654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.91  E-value=3.1e-24  Score=133.92  Aligned_cols=99  Identities=20%  Similarity=0.352  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++................+++.|++||.+....++.++|
T Consensus       130 qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05092         130 QIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhh
Confidence            6889999999   8999999999999999999999999999987554322211122223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||++++++++ |..||...+
T Consensus       207 i~slG~il~el~~~g~~p~~~~~  229 (280)
T cd05092         207 IWSFGVVLWEIFTYGKQPWYQLS  229 (280)
T ss_pred             HHHHHHHHHHHHcCCCCCCccCC
Confidence            9999999999998 899986543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.4e-24  Score=133.93  Aligned_cols=100  Identities=27%  Similarity=0.420  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       127 ~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (277)
T cd05032         127 EIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSD  203 (277)
T ss_pred             HHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccc
Confidence            7889999999   8999999999999999999999999999886543322222222234567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||++++|+++ |..||...+.
T Consensus       204 i~slG~il~el~t~g~~p~~~~~~  227 (277)
T cd05032         204 VWSFGVVLWEMATLAEQPYQGLSN  227 (277)
T ss_pred             hHHHHHHHHHhhccCCCCCccCCH
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.91  E-value=2.9e-24  Score=134.56  Aligned_cols=100  Identities=25%  Similarity=0.402  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||++++++.++++|||++................++..|++||......++.++|
T Consensus       135 ~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  211 (290)
T cd05045         135 QISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD  211 (290)
T ss_pred             HHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhH
Confidence            7889999999   8999999999999999999999999999987553322222222223456799999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||++++++++ |..||.+.++
T Consensus       212 i~slG~~l~el~t~g~~p~~~~~~  235 (290)
T cd05045         212 VWSFGVLLWEIVTLGGNPYPGIAP  235 (290)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999998 9999976654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.4e-24  Score=130.22  Aligned_cols=97  Identities=25%  Similarity=0.421  Sum_probs=85.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   .+++||||+||.|++++..+..+++|||=+...++    .+..+.+||..|++||+..+...+..+|
T Consensus       132 q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~----~kR~tlcgt~dyl~pEmv~~~~hd~~Vd  204 (281)
T KOG0580|consen  132 QLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS----NKRKTLCGTLDYLPPEMVEGRGHDKFVD  204 (281)
T ss_pred             HHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCC----CCceeeecccccCCHhhcCCCCccchhh
Confidence            7899999999   89999999999999999999999999996654432    2334558999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|++|++.||++.|.+||...+..
T Consensus       205 ~w~lgvl~yeflvg~ppFes~~~~  228 (281)
T KOG0580|consen  205 LWSLGVLCYEFLVGLPPFESQSHS  228 (281)
T ss_pred             HHHHHHHHHHHHhcCCchhhhhhH
Confidence            999999999999999999876643

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=150.51  Aligned_cols=98  Identities=29%  Similarity=0.514  Sum_probs=84.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      +++.|+.-+|   +.|+|||||||+|||+|..|.++++|||-|-.+..+..... ....|||.|.+||++..     +.|
T Consensus       183 EiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s-~~aVGTPDYISPEvLqs~~~~~g~y  258 (1317)
T KOG0612|consen  183 EIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS-SVAVGTPDYISPEVLQSQGDGKGEY  258 (1317)
T ss_pred             HHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe-ccccCCCCccCHHHHHhhcCCcccc
Confidence            5778999999   89999999999999999999999999999877765444333 34479999999999853     458


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +..+|.||+|+++|||+.|..||-.++
T Consensus       259 G~ecDwWSlGV~~YEMlyG~TPFYads  285 (1317)
T KOG0612|consen  259 GRECDWWSLGVFMYEMLYGETPFYADS  285 (1317)
T ss_pred             CCccchhhhHHHHHHHHcCCCcchHHH
Confidence            899999999999999999999996553

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.90  E-value=4.6e-24  Score=132.97  Aligned_cols=100  Identities=30%  Similarity=0.444  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||+++.+.............++..|++||.+....++.++|
T Consensus       125 ~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  201 (280)
T cd05043         125 QIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASD  201 (280)
T ss_pred             HHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhh
Confidence            6889999999   8999999999999999999999999999987654332221112223556799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |+.||...++
T Consensus       202 i~slG~~l~el~~~g~~p~~~~~~  225 (280)
T cd05043         202 VWSFGVLLWELMTLGQTPYVEIDP  225 (280)
T ss_pred             HHHhHHHHHHHhcCCCCCcCcCCH
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=9.3e-24  Score=135.93  Aligned_cols=93  Identities=23%  Similarity=0.360  Sum_probs=77.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++........   .....|+..|++||++.+..++.++|
T Consensus       165 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~D  238 (357)
T PHA03209        165 QILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA---FLGLAGTVETNAPEVLARDKYNSKAD  238 (357)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCcc---cccccccccccCCeecCCCCCCchhh
Confidence            7899999999   89999999999999999999999999998864322111   11235788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCC-CCcc
Q 043407           82 VFSFGVLLLVLLTGQ-KLYS  100 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~-~p~~  100 (110)
                      +||+|+++||++++. .+|.
T Consensus       239 iwSlGvvl~ell~~~~~~f~  258 (357)
T PHA03209        239 IWSAGIVLFEMLAYPSTIFE  258 (357)
T ss_pred             HHHHHHHHHHHHHcCCcccc
Confidence            999999999999854 4444

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.90  E-value=8.2e-24  Score=130.49  Aligned_cols=100  Identities=26%  Similarity=0.414  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++........... .....++..|++||.+....++.++
T Consensus       103 qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05116         103 QVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKS  179 (257)
T ss_pred             HHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchh
Confidence            7889999999   89999999999999999999999999999876543322111 1111234679999998877888999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||||+++||+++ |..||...+.
T Consensus       180 Di~slG~~l~el~t~g~~p~~~~~~  204 (257)
T cd05116         180 DVWSFGVLMWEAFSYGQKPYKGMKG  204 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.90  E-value=8.1e-24  Score=131.98  Aligned_cols=93  Identities=24%  Similarity=0.448  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++........    ....++..|++||.+....++.++|
T Consensus       103 qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~D  175 (279)
T cd06619         103 AVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA----KTYVGTNAYMAPERISGEQYGIHSD  175 (279)
T ss_pred             HHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc----cCCCCChhhcCceeecCCCCCCcch
Confidence            6889999999   89999999999999999999999999999865432211    1225778899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||+|+++|++++|..||..
T Consensus       176 vwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         176 VWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             HHHHHHHHHHHHhCCCCchh
Confidence            99999999999999999964

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.90  E-value=6e-24  Score=134.55  Aligned_cols=100  Identities=27%  Similarity=0.428  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||+++...............++..|++||.+....++.++|
T Consensus       142 qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (314)
T cd05099         142 QVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD  218 (314)
T ss_pred             HHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence            6889999999   8999999999999999999999999999987654322111111112345799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.+.+.
T Consensus       219 iwslG~~l~el~~~g~~p~~~~~~  242 (314)
T cd05099         219 VWSFGILMWEIFTLGGSPYPGIPV  242 (314)
T ss_pred             hhHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 8888876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.90  E-value=5.9e-24  Score=132.43  Aligned_cols=100  Identities=26%  Similarity=0.389  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      ||+.|++|||   +.+++|+||+|+||+++.++   .++++|||++.................+..|++||.+....++.
T Consensus       124 qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (277)
T cd05036         124 DVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS  200 (277)
T ss_pred             HHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCc
Confidence            6889999999   88999999999999998654   58999999987653322211111223345799999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++ |..||++.+.
T Consensus       201 ~~DiwslG~il~el~~~g~~pf~~~~~  227 (277)
T cd05036         201 KTDVWSFGVLLWEIFSLGYMPYPGRTN  227 (277)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999999997 9999986543

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.90  E-value=9e-24  Score=130.70  Aligned_cols=99  Identities=25%  Similarity=0.411  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++.......... ......+..|++||.+.+..++.++|
T Consensus       112 ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (263)
T cd05052         112 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-HAGAKFPIKWTAPESLAYNKFSIKSD  187 (263)
T ss_pred             HHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec-cCCCCCccccCCHHHhccCCCCchhH
Confidence            7889999999   8999999999999999999999999999987654322111 11112345799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       188 v~slG~il~el~t~g~~p~~~~~~  211 (263)
T cd05052         188 VWAFGVLLWEIATYGMSPYPGIDL  211 (263)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.90  E-value=5.3e-24  Score=137.64  Aligned_cols=98  Identities=30%  Similarity=0.456  Sum_probs=85.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC----CceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.+++|||   ..+++|||+||+|+++...    +.++++|||++.....   .......+|++.|+|||++....++
T Consensus       143 ~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~  216 (382)
T KOG0032|consen  143 QILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYG  216 (382)
T ss_pred             HHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCC
Confidence            7889999999   8999999999999999654    4799999999987655   2233344799999999999989999


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ..+|+||+|+++|.++.|..||.+.+..
T Consensus       217 ~~~DiWS~Gvi~yiLL~G~~PF~~~~~~  244 (382)
T KOG0032|consen  217 DEVDVWSIGVILYILLSGVPPFWGETEF  244 (382)
T ss_pred             cccchhHHHHHHHHHhhCCCCCcCCChh
Confidence            9999999999999999999999988754

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=9.4e-24  Score=131.56  Aligned_cols=100  Identities=27%  Similarity=0.399  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       117 qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (279)
T cd05057         117 QIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSD  193 (279)
T ss_pred             HHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhh
Confidence            7889999999   8999999999999999999999999999987654322221111112345799999988888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++|+++ |..||.+.+.
T Consensus       194 i~slG~~l~el~~~g~~p~~~~~~  217 (279)
T cd05057         194 VWSYGVTVWELMTFGAKPYEGIPA  217 (279)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCH
Confidence            9999999999998 9999977654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.90  E-value=4e-24  Score=134.47  Aligned_cols=99  Identities=27%  Similarity=0.490  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   ..+++|+||+|.||+++.++.++++|||++.........  .....+++.|++||.+....++.++|
T Consensus       124 ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  198 (296)
T cd06654         124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  198 (296)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc--cCcccCCccccCHHHHcCCCCCccch
Confidence            6889999999   789999999999999999999999999987654322211  11225777899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||||++++++++|..||...++.
T Consensus       199 v~s~Gvil~~l~~g~~pf~~~~~~  222 (296)
T cd06654         199 IWSLGIMAIEMIEGEPPYLNENPL  222 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999776543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.90  E-value=5.5e-24  Score=133.96  Aligned_cols=98  Identities=20%  Similarity=0.390  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....+++.|++||.+.+. .++.++
T Consensus       112 qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~  186 (301)
T cd07873         112 QLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY--SNEVVTLWYRPPDILLGSTDYSTQI  186 (301)
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc--cccceeecccCcHHHhCCCCCccHH
Confidence            7889999999   8999999999999999999999999999886543222111  112457789999987654 467889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       187 Dv~slG~~l~el~tg~~~f~~~~~  210 (301)
T cd07873         187 DMWGVGCIFYEMSTGRPLFPGSTV  210 (301)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.90  E-value=9.3e-24  Score=130.43  Aligned_cols=100  Identities=21%  Similarity=0.421  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecc-cccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA-IPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~-~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||++............. ...++..|++||.+....++.++
T Consensus       103 ~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05115         103 QVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRS  179 (257)
T ss_pred             HHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchh
Confidence            6889999999   8999999999999999999999999999987554332211111 11234579999998888888999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||||+++|++++ |..||...+.
T Consensus       180 Di~slG~~l~el~~~g~~p~~~~~~  204 (257)
T cd05115         180 DVWSYGITMWEAFSYGQKPYKKMKG  204 (257)
T ss_pred             hHHHHHHHHHHHhcCCCCCcCcCCH
Confidence            99999999999996 9999976543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.90  E-value=6.4e-24  Score=138.51  Aligned_cols=98  Identities=21%  Similarity=0.424  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   ..+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       245 qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  321 (400)
T cd05105         245 QVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSD  321 (400)
T ss_pred             HHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhh
Confidence            6899999999   8999999999999999999999999999987553322222222224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~  102 (110)
                      +||||+++|++++ |..||...
T Consensus       322 iwSlGvil~ellt~g~~P~~~~  343 (400)
T cd05105         322 VWSYGILLWEIFSLGGTPYPGM  343 (400)
T ss_pred             HHHHHHHHHHHHHCCCCCCccc
Confidence            9999999999997 88998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.90  E-value=8.6e-24  Score=134.99  Aligned_cols=96  Identities=22%  Similarity=0.403  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||.  ..+++|+||||+||+++.++.++++|||++........    ....++..|++||.+.+..++.++|
T Consensus       111 ~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~D  184 (333)
T cd06650         111 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQSD  184 (333)
T ss_pred             HHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc----ccCCCCccccCHHHhcCCCCCcHHH
Confidence            67899999993  24799999999999999999999999999865432211    1225778899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|+.||...+
T Consensus       185 vwslG~il~~l~~g~~p~~~~~  206 (333)
T cd06650         185 IWSMGLSLVEMAIGRYPIPPPD  206 (333)
T ss_pred             HHHHHHHHHHHHHCCCCCCCcc
Confidence            9999999999999999997654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=3.8e-24  Score=140.46  Aligned_cols=96  Identities=25%  Similarity=0.431  Sum_probs=83.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD------   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~------   75 (110)
                      |+++|+.+.|   +.+|||.||||.|+++- .|.+|++|||.+..+..+.+..-.....||+.||+||-+....      
T Consensus       468 qML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~  543 (677)
T KOG0596|consen  468 QMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENG  543 (677)
T ss_pred             HHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCC
Confidence            6789999999   89999999999999985 4789999999999888777776666778999999999885422      


Q ss_pred             -----CCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           76 -----YNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        76 -----~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                           .+.++|+||+||++|+|+.|+.||..
T Consensus       544 ~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  544 KSKIKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             CcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence                 45789999999999999999999953

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.4e-23  Score=129.50  Aligned_cols=100  Identities=27%  Similarity=0.341  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........... .....++..|++||.+.+..++.++
T Consensus       112 ~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (263)
T cd06625         112 QILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKA  188 (263)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchh
Confidence            6789999999   89999999999999999999999999999865432211111 0122466789999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|+++|++++|+.||...+.
T Consensus       189 Di~slG~il~el~~g~~p~~~~~~  212 (263)
T cd06625         189 DVWSVGCTVVEMLTEKPPWAEFEA  212 (263)
T ss_pred             hhHHHHHHHHHHHhCCCCccccch
Confidence            999999999999999999965433

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.90  E-value=8.9e-24  Score=131.96  Aligned_cols=96  Identities=28%  Similarity=0.522  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||++........    ....++..|++||.... ..++.++
T Consensus       105 qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  177 (279)
T cd05633         105 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGTAYDSSA  177 (279)
T ss_pred             HHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc----cCcCCCcCccCHHHhcCCCCCCchh
Confidence            6889999999   78999999999999999999999999998865432211    12257889999998864 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||...+.
T Consensus       178 Di~slG~~l~~l~~g~~pf~~~~~  201 (279)
T cd05633         178 DWFSLGCMLFKLLRGHSPFRQHKT  201 (279)
T ss_pred             hhHHHHHHHHHHHhCCCCcCCCCC
Confidence            999999999999999999975543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.90  E-value=3.8e-24  Score=134.05  Aligned_cols=99  Identities=28%  Similarity=0.421  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       140 qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  216 (293)
T cd05053         140 QVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD  216 (293)
T ss_pred             HHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccc
Confidence            6889999999   8999999999999999999999999999987654322222222223456799999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||+++|++++ |..||.+.+
T Consensus       217 i~slG~il~el~~~g~~p~~~~~  239 (293)
T cd05053         217 VWSFGVLLWEIFTLGGSPYPGIP  239 (293)
T ss_pred             eeehhhHHHHHhcCCCCCCCCCC
Confidence            9999999999997 889987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.90  E-value=1.2e-23  Score=129.34  Aligned_cols=97  Identities=27%  Similarity=0.445  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|+||+++.++.++++|||++..........  ....+++.|++||+.....++.++|
T Consensus       109 ~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd08529         109 QILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA--NTIVGTPYYLSPELCEDKPYNEKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchh--hccccCccccCHHHhcCCCCCCccc
Confidence            6889999999   8999999999999999999999999999887654332211  1224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       184 i~slG~il~~l~~g~~p~~~~~  205 (256)
T cd08529         184 VWALGVVLYECCTGKHPFDANN  205 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997665

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.90  E-value=7.5e-24  Score=130.78  Aligned_cols=99  Identities=28%  Similarity=0.483  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||++........... ....++..|++||.+....++.++|
T Consensus       111 ~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05072         111 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSD  186 (261)
T ss_pred             HHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc-CCCccceecCCHHHhccCCCChhhh
Confidence            6889999999   89999999999999999999999999999876543221111 1113456799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||...+.
T Consensus       187 i~slG~~l~~l~t~g~~p~~~~~~  210 (261)
T cd05072         187 VWSFGILLYEIVTYGKIPYPGMSN  210 (261)
T ss_pred             hhhhHHHHHHHHccCCCCCCCCCH
Confidence            9999999999998 9999976544

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.90  E-value=9.5e-24  Score=130.98  Aligned_cols=100  Identities=23%  Similarity=0.423  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       121 ~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sD  197 (273)
T cd05074         121 DIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSD  197 (273)
T ss_pred             HHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhh
Confidence            6889999999   7899999999999999999999999999987654332222222223456789999988888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.+.+.
T Consensus       198 i~slG~il~el~~~g~~p~~~~~~  221 (273)
T cd05074         198 VWAFGVTMWEIMTRGQTPYAGVEN  221 (273)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCCCH
Confidence            9999999999998 8888876543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.90  E-value=9.6e-24  Score=132.70  Aligned_cols=97  Identities=24%  Similarity=0.401  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++........   ......+..|++||......++.++|
T Consensus       127 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  200 (297)
T cd05089         127 DVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVK---KTMGRLPVRWMAIESLNYSVYTTKSD  200 (297)
T ss_pred             HHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCccccceec---cCCCCcCccccCchhhccCCCCchhh
Confidence            6889999999   89999999999999999999999999998753221111   11112244699999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||++++++++ |..||.+.+.
T Consensus       201 vwSlG~il~el~t~g~~pf~~~~~  224 (297)
T cd05089         201 VWSFGVLLWEIVSLGGTPYCGMTC  224 (297)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999997 9999976543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.90  E-value=6.8e-24  Score=133.91  Aligned_cols=100  Identities=28%  Similarity=0.411  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||+||+++.++.++++|||.+................++..|++||.+.+..++.++|
T Consensus       148 qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  224 (307)
T cd05098         148 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  224 (307)
T ss_pred             HHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence            6889999999   8999999999999999999999999999986553322111111112345799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.+.+.
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~  248 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPV  248 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCH
Confidence            9999999999998 8888876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.90  E-value=9.7e-24  Score=131.68  Aligned_cols=98  Identities=28%  Similarity=0.356  Sum_probs=80.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....++..|++||.+.     ...+
T Consensus       111 qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (282)
T cd06643         111 QTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPY  185 (282)
T ss_pred             HHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccccc--cccccccccccCHhhccccCCCCCCC
Confidence            7889999999   899999999999999999999999999998654332211  11225778899999874     3346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|+++|++++|..||...+.
T Consensus       186 ~~~~Dv~slGvil~el~~g~~p~~~~~~  213 (282)
T cd06643         186 DYKADVWSLGITLIEMAQIEPPHHELNP  213 (282)
T ss_pred             CccchhhhHHHHHHHHccCCCCccccCH
Confidence            7789999999999999999999976543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1e-24  Score=146.98  Aligned_cols=95  Identities=26%  Similarity=0.479  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccCC--CCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~   78 (110)
                      ||++|+.|||   ...|+|||||-+|+++. ..|.+|++|||-+++...-.+  +..+..|+..|||||++..++  |+.
T Consensus       683 QILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP--~TETFTGTLQYMAPEvIDqG~RGYG~  757 (1226)
T KOG4279|consen  683 QILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDQGPRGYGK  757 (1226)
T ss_pred             HHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCc--cccccccchhhhChHhhccCCcCCCc
Confidence            7999999999   89999999999999995 679999999999887654322  334457999999999998765  789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCccc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      ++|+|||||.+.||.||++||-.
T Consensus       758 aADIWS~GCT~vEMATGrPPF~E  780 (1226)
T KOG4279|consen  758 AADIWSFGCTMVEMATGRPPFVE  780 (1226)
T ss_pred             hhhhhhccceeEeeccCCCCeee
Confidence            99999999999999999999953

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.90  E-value=9.3e-24  Score=132.64  Aligned_cols=98  Identities=24%  Similarity=0.472  Sum_probs=82.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+....++.++|
T Consensus       126 qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  200 (292)
T cd06658         126 SVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KSLVGTPYWMAPEVISRLPYGTEVD  200 (292)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC--ceeecCccccCHHHHccCCCCchhh
Confidence            6889999999   7899999999999999999999999999886543222111  1225778899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++|+++|..||.+.+.
T Consensus       201 v~slGvil~el~~g~~p~~~~~~  223 (292)
T cd06658         201 IWSLGIMVIEMIDGEPPYFNEPP  223 (292)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.90  E-value=7.1e-24  Score=132.24  Aligned_cols=97  Identities=23%  Similarity=0.380  Sum_probs=79.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++.........  .....+++.|++||.+.+. .++.++
T Consensus       109 qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (285)
T cd07861         109 QILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV--YTHEVVTLWYRAPEVLLGSPRYSTPV  183 (285)
T ss_pred             HHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc--ccCCcccccccChHHhcCCCCcCcHH
Confidence            7899999999   899999999999999999999999999998654322111  1122457789999987654 467889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||.+.+
T Consensus       184 Dv~slG~il~~l~tg~~~~~~~~  206 (285)
T cd07861         184 DIWSIGTIFAEMATKKPLFHGDS  206 (285)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=7.9e-24  Score=141.41  Aligned_cols=104  Identities=29%  Similarity=0.503  Sum_probs=85.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC--CCC----------------------------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP--DGE----------------------------   51 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~--~~~----------------------------   51 (110)
                      ++..|+++.|   ++|+|||||||+|||+|.+|.+|+.|||||..+.  .+.                            
T Consensus       737 EltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lk  813 (1034)
T KOG0608|consen  737 ELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLK  813 (1034)
T ss_pred             HHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccch
Confidence            3556899999   8999999999999999999999999999985321  000                            


Q ss_pred             ----------cceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCccccc
Q 043407           52 ----------THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRH  108 (110)
Q Consensus        52 ----------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~~~  108 (110)
                                .........|++.|+|||++....++..+|.||.|++++||+-|+.||..+++.+..
T Consensus       814 vL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq  880 (1034)
T KOG0608|consen  814 VLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQ  880 (1034)
T ss_pred             HHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcce
Confidence                      000012356899999999999999999999999999999999999999998887653

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.90  E-value=1.1e-23  Score=129.73  Aligned_cols=94  Identities=27%  Similarity=0.470  Sum_probs=79.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||++.........     ...+..|++||.+....++.++|
T Consensus       110 ~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~D  181 (256)
T cd05082         110 DVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-----GKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCCC-----CccceeecCHHHHccCCCCchhh
Confidence            6889999999   899999999999999999999999999988754332211     12345799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|+++|++++ |..||...+
T Consensus       182 v~slG~i~~~l~~~g~~p~~~~~  204 (256)
T cd05082         182 VWSFGILLWEIYSFGRVPYPRIP  204 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999997 999987544

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.90  E-value=1.5e-23  Score=130.81  Aligned_cols=95  Identities=29%  Similarity=0.552  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+|++|+||+++.++.++++|||++........    ....++..|++||.+... .++.++
T Consensus       105 ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  177 (278)
T cd05606         105 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSA  177 (278)
T ss_pred             HHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC----cCcCCCcCCcCcHHhcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999865433221    123578889999998644 578889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||....
T Consensus       178 Di~s~G~~l~~l~~g~~p~~~~~  200 (278)
T cd05606         178 DWFSLGCMLFKLLRGHSPFRQHK  200 (278)
T ss_pred             chHhHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.90  E-value=1.3e-23  Score=134.87  Aligned_cols=96  Identities=22%  Similarity=0.352  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++........   .....++..|++||.+.+..++.++|
T Consensus       126 ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (353)
T cd07850         126 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  199 (353)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchh
Confidence            6889999999   78999999999999999999999999999875533211   11224677899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       200 vwslG~~l~~l~~g~~pf~~~~  221 (353)
T cd07850         200 IWSVGCIMGEMIRGTVLFPGTD  221 (353)
T ss_pred             hHhHHHHHHHHHHCCCCCCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.90  E-value=1.4e-23  Score=130.15  Aligned_cols=100  Identities=23%  Similarity=0.318  Sum_probs=79.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-------   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-------   74 (110)
                      |++.|++|||   +.+++|+|+||.||+++.++.++++|||++................++..|++||++...       
T Consensus       108 qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (269)
T cd05087         108 EIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVV  184 (269)
T ss_pred             HHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhcccccccccc
Confidence            6889999999   899999999999999999999999999998654332222222223456789999987532       


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           75 DYNEKCDVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      .++.++|+||+|++++|+++ |..||...+.
T Consensus       185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~  215 (269)
T cd05087         185 DQTKESNVWSLGVTIWELFELGSQPYRHLSD  215 (269)
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCh
Confidence            35678999999999999996 9999976543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.90  E-value=1.2e-23  Score=134.18  Aligned_cols=100  Identities=27%  Similarity=0.410  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||+++...............++..|++||.+....++.++|
T Consensus       142 qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (334)
T cd05100         142 QVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  218 (334)
T ss_pred             HHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence            7889999999   8999999999999999999999999999986553322111111112345799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++|+++ |..||.+.+.
T Consensus       219 i~slG~il~el~~~g~~p~~~~~~  242 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPGIPV  242 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999998 8888876543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.90  E-value=3.1e-25  Score=135.21  Aligned_cols=94  Identities=29%  Similarity=0.483  Sum_probs=76.6

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC--CCCchh
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG--DYNEKC   80 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~   80 (110)
                      .+.||.||-.  ...+||||+||.||+++..|.+|++|||.+-.....-   ....-.|+..|||||.+...  .++.++
T Consensus       176 tV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si---AkT~daGCrpYmAPERi~p~~~gyDiRS  250 (361)
T KOG1006|consen  176 TVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI---AKTVDAGCRPYMAPERIDPSDKGYDIRS  250 (361)
T ss_pred             ehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHH---HhhhccCCccccChhccCCccCCcchhh
Confidence            3568899874  5689999999999999999999999999986543211   11122688899999999654  388999


Q ss_pred             hHHHHHHHHHHHHhCCCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      |+||+|+.++|+.+|..||.+
T Consensus       251 DvWSLGITL~EvAtG~fPyr~  271 (361)
T KOG1006|consen  251 DVWSLGITLYEVATGNFPYRK  271 (361)
T ss_pred             hhhhhcceEeeeecCCCCcch
Confidence            999999999999999999864

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.90  E-value=1.5e-23  Score=132.19  Aligned_cols=99  Identities=21%  Similarity=0.411  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       149 ~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  225 (302)
T cd05055         149 QVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  225 (302)
T ss_pred             HHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhH
Confidence            6889999999   8899999999999999999999999999987554332211112223556799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||.+.+
T Consensus       226 iwslGvil~el~t~g~~p~~~~~  248 (302)
T cd05055         226 VWSYGILLWEIFSLGSNPYPGMP  248 (302)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCC
Confidence            9999999999998 999987654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.90  E-value=1.5e-23  Score=128.95  Aligned_cols=99  Identities=30%  Similarity=0.451  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|+||+++.++.++++|||.+................++..|++||.+....++.++|
T Consensus       113 ~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (262)
T cd00192         113 QIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSD  189 (262)
T ss_pred             HHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhc
Confidence            6889999999   8999999999999999999999999999987665433222222334677899999988878899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||...+
T Consensus       190 i~slG~il~~l~~~g~~p~~~~~  212 (262)
T cd00192         190 VWSFGVLLWEIFTLGATPYPGLS  212 (262)
T ss_pred             cHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999998 689997654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.90  E-value=1.3e-23  Score=131.52  Aligned_cols=99  Identities=23%  Similarity=0.407  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +++++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       127 ~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  203 (288)
T cd05061         127 EIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSD  203 (288)
T ss_pred             HHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhH
Confidence            6889999999   8999999999999999999999999999987543322211112223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++|+++ |..||.+.+
T Consensus       204 vwslG~~l~el~~~~~~p~~~~~  226 (288)
T cd05061         204 MWSFGVVLWEITSLAEQPYQGLS  226 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999998 788886644

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.90  E-value=1.5e-23  Score=130.79  Aligned_cols=105  Identities=30%  Similarity=0.580  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc---eEEecccccccCC-----CCCcceecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIP-----DGETHIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~---~~l~dfg~~~~~~-----~~~~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      +|++||.|||   .++|.|||+||.||+-.+...   +|++||.+...+-     +........++.|+..|||||++.-
T Consensus       184 dia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~  260 (463)
T KOG0607|consen  184 DIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV  260 (463)
T ss_pred             HHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhh
Confidence            5789999999   899999999999999976654   6999998865331     1222223345678999999998742


Q ss_pred             -----CCCCchhhHHHHHHHHHHHHhCCCCcccCCcccccc
Q 043407           74 -----GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHW  109 (110)
Q Consensus        74 -----~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~~~~  109 (110)
                           .-|+.+.|.||+|+++|-|++|..||.|....|.-|
T Consensus       261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGW  301 (463)
T KOG0607|consen  261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGW  301 (463)
T ss_pred             hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCc
Confidence                 347899999999999999999999999998888776

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.90  E-value=1.6e-23  Score=128.74  Aligned_cols=99  Identities=24%  Similarity=0.412  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.................+..|++||.+....++.++|
T Consensus       102 qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  178 (252)
T cd05084         102 NAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESD  178 (252)
T ss_pred             HHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHH
Confidence            6889999999   8999999999999999999999999999986543221111111112234699999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||...+
T Consensus       179 v~slG~il~e~~~~~~~p~~~~~  201 (252)
T cd05084         179 VWSFGILLWEAFSLGAVPYANLS  201 (252)
T ss_pred             HHHHHHHHHHHHhCCCCCccccC
Confidence            9999999999997 888886544

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.90  E-value=2.7e-23  Score=129.08  Aligned_cols=94  Identities=29%  Similarity=0.481  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |+++|+.|||   +.+++|+||+|.||+++.++ .++++|||++.......      ...++..|++||.+....++.++
T Consensus       117 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  187 (267)
T PHA03390        117 QLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSF  187 (267)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchh
Confidence            7899999999   88999999999999999888 99999999876543322      12467789999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.....
T Consensus       188 DvwslG~il~~l~~g~~p~~~~~~  211 (267)
T PHA03390        188 DWWAVGVLTYELLTGKHPFKEDED  211 (267)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCCc
Confidence            999999999999999999975543

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.90  E-value=2.8e-23  Score=133.06  Aligned_cols=99  Identities=26%  Similarity=0.456  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       187 qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  263 (343)
T cd05103         187 QVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  263 (343)
T ss_pred             HHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999987653332222222223456799999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||....
T Consensus       264 i~slG~~l~el~~~g~~p~~~~~  286 (343)
T cd05103         264 VWSFGVLLWEIFSLGASPYPGVK  286 (343)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCcc
Confidence            9999999999997 899986543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.90  E-value=1.3e-23  Score=132.23  Aligned_cols=97  Identities=27%  Similarity=0.499  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+....++.++|
T Consensus       125 qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  199 (297)
T cd06659         125 SVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSLVGTPYWMAPEVISRTPYGTEVD  199 (297)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc--cceecCccccCHHHHccCCCCchhh
Confidence            6889999999   8999999999999999999999999999886544322211  2235778899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       200 v~slG~il~el~~g~~p~~~~~  221 (297)
T cd06659         200 IWSLGIMVIEMVDGEPPYFSDS  221 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999986554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.89  E-value=1.9e-23  Score=129.32  Aligned_cols=99  Identities=32%  Similarity=0.437  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|+|   +.+++|+||+|.||+++.++.++++|||.+........... ....++..|++||......++.++|
T Consensus       110 ~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~D  185 (262)
T cd05071         110 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  185 (262)
T ss_pred             HHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccc-cCCcccceecCHhHhccCCCCchhh
Confidence            6889999999   89999999999999999999999999999865543222111 1123456799999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+...
T Consensus       186 vwslG~~l~ellt~g~~p~~~~~~  209 (262)
T cd05071         186 VWSFGILLTELTTKGRVPYPGMVN  209 (262)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCh
Confidence            9999999999999 8889976644

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.89  E-value=1.9e-23  Score=131.21  Aligned_cols=99  Identities=22%  Similarity=0.387  Sum_probs=79.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++.................+..|++||......++.++|
T Consensus       138 ~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  214 (296)
T cd05095         138 QIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASD  214 (296)
T ss_pred             HHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhh
Confidence            6889999999   8999999999999999999999999999987553322211112223456789999888888899999


Q ss_pred             HHHHHHHHHHHHh--CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT--GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~--g~~p~~~~~  103 (110)
                      +||+|+++||+++  |..||...+
T Consensus       215 iwSlG~~l~el~~~~~~~p~~~~~  238 (296)
T cd05095         215 VWAFGVTLWEILTLCKEQPYSQLS  238 (296)
T ss_pred             hhHHHHHHHHHHHhCCCCCccccC
Confidence            9999999999998  678886543

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=4.2e-23  Score=127.51  Aligned_cols=99  Identities=25%  Similarity=0.444  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||++............. ...+..|++||......++.++|
T Consensus       111 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~-~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05068         111 QVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG-AKFPIKWTAPEAALYNRFSIKSD  186 (261)
T ss_pred             HHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC-CcCceeccCccccccCCCCchhh
Confidence            6889999999   8999999999999999999999999999987654322111111 11234699999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |+.||.+.+.
T Consensus       187 i~slG~~l~el~t~g~~p~~~~~~  210 (261)
T cd05068         187 VWSFGILLTEIVTYGRMPYPGMTN  210 (261)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999999 9999976553

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.89  E-value=1.8e-23  Score=129.03  Aligned_cols=99  Identities=30%  Similarity=0.456  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc--eecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |+++|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .......++..|++||......++.+
T Consensus       106 ~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  182 (262)
T cd05058         106 QVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTK  182 (262)
T ss_pred             HHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchH
Confidence            7899999999   899999999999999999999999999998654321110  11112234567999999888888999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +|+||||++++|+++ |..||...+
T Consensus       183 ~Di~slG~~l~el~~~~~~~~~~~~  207 (262)
T cd05058         183 SDVWSFGVLLWELMTRGAPPYPDVD  207 (262)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            999999999999999 566776443

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.89  E-value=3.1e-23  Score=129.89  Aligned_cols=97  Identities=21%  Similarity=0.356  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++..........  ....++..|++||.+.+. .++.++
T Consensus       111 qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  185 (291)
T cd07870         111 QLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY--SSEVVTLWYRPPDVLLGATDYSSAL  185 (291)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC--CCccccccccCCceeecCCCCCcHH
Confidence            7889999999   7899999999999999999999999999886543221111  112457789999988654 467889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       186 Dv~slG~~l~~l~~g~~~f~~~~  208 (291)
T cd07870         186 DIWGAGCIFIEMLQGQPAFPGVS  208 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCch
Confidence            99999999999999999997543

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.89  E-value=2.5e-23  Score=128.55  Aligned_cols=99  Identities=30%  Similarity=0.455  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||++++++.++++|||++........... ....++..|++||.......+.++|
T Consensus       110 ~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~D  185 (260)
T cd05069         110 QIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc-CCCccchhhCCHHHhccCCcChHHH
Confidence            6889999999   89999999999999999999999999999865533221111 1113456799999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       186 i~slG~~l~el~t~g~~p~~~~~~  209 (260)
T cd05069         186 VWSFGILLTELVTKGRVPYPGMVN  209 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 8999977544

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.89  E-value=1.9e-23  Score=129.55  Aligned_cols=99  Identities=19%  Similarity=0.307  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||.......... .......++..|++||.+....++.++|
T Consensus       115 ~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~D  190 (266)
T cd05064         115 GLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASD  190 (266)
T ss_pred             HHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccch-hcccCCCCceeecCHHHHhhCCccchhH
Confidence            6889999999   89999999999999999999999999997654322111 1111223456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++||+++ |..||.+.+.
T Consensus       191 i~slG~~l~ell~~g~~p~~~~~~  214 (266)
T cd05064         191 VWSFGIVMWEVMSYGERPYWDMSG  214 (266)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCCH
Confidence            9999999999775 9999976543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.89  E-value=2.6e-23  Score=129.77  Aligned_cols=98  Identities=28%  Similarity=0.460  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........... .....++..|++||......++.++
T Consensus       115 ~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~  191 (283)
T cd05080         115 QICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYAS  191 (283)
T ss_pred             HHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCccc
Confidence            6889999999   89999999999999999999999999999876543322111 1112345568999998888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|..||...
T Consensus       192 Di~slG~~l~el~tg~~p~~~~  213 (283)
T cd05080         192 DVWSFGVTLYELLTHCDSKQSP  213 (283)
T ss_pred             ccHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999999888543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.89  E-value=3.7e-23  Score=127.31  Aligned_cols=97  Identities=23%  Similarity=0.425  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.+||   +.+++|+||+|+||+++.++.++++|||++........  ......+++.|++||......++.++|
T Consensus       110 ~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~D  184 (257)
T cd08223         110 QIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD--MASTLIGTPYYMSPELFSNKPYNYKSD  184 (257)
T ss_pred             HHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCC--ccccccCCcCccChhHhcCCCCCchhh
Confidence            6788999999   89999999999999999999999999999876533221  112235778899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|+.||...+
T Consensus       185 v~slG~il~~l~~g~~~~~~~~  206 (257)
T cd08223         185 VWALGCCVYEMATLKHAFNAKD  206 (257)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.89  E-value=1.8e-23  Score=129.69  Aligned_cols=96  Identities=24%  Similarity=0.392  Sum_probs=79.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|++|||   +.+++|+|++|.||+++.++.++++|||++........  ......++..|++||++..     ..+
T Consensus       119 qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~  193 (272)
T cd06637         119 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATY  193 (272)
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceecccccc--cCCcccccccccCHhHhccccCcCCCC
Confidence            7899999999   78999999999999999999999999999875432211  1122357788999998852     346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +.++|+||+|+++|++++|..||...
T Consensus       194 ~~~~Dv~slGv~l~el~~g~~p~~~~  219 (272)
T cd06637         194 DFKSDLWSLGITAIEMAEGAPPLCDM  219 (272)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCcccc
Confidence            78899999999999999999998644

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.89  E-value=4.5e-24  Score=141.20  Aligned_cols=95  Identities=32%  Similarity=0.506  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      ||++||.|||+. ..+|||||||=+||++.. .|.+|++|+||+........  +.  ..|||.|||||+.. ..|+..+
T Consensus       151 QILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~a--ks--vIGTPEFMAPEmYE-E~YnE~V  224 (632)
T KOG0584|consen  151 QILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHA--KS--VIGTPEFMAPEMYE-ENYNELV  224 (632)
T ss_pred             HHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcccc--ce--eccCccccChHHHh-hhcchhh
Confidence            799999999976 579999999999999975 48999999999976543221  11  27999999999876 7889999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||||+.+.||+|+..||+-=
T Consensus       225 DVYaFGMCmLEMvT~eYPYsEC  246 (632)
T KOG0584|consen  225 DVYAFGMCMLEMVTSEYPYSEC  246 (632)
T ss_pred             hhhhhhHHHHHHHhccCChhhh
Confidence            9999999999999999999743

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.89  E-value=2.1e-23  Score=129.25  Aligned_cols=99  Identities=28%  Similarity=0.458  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-----ceEEecccccccCCCCCcceecccccccccccccceeccCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~   76 (110)
                      |++.|++|||   +.+++|+|++|.||+++.++     .++++|||++.................+..|++||.+....+
T Consensus       114 ~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  190 (269)
T cd05044         114 DVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF  190 (269)
T ss_pred             HHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCc
Confidence            6788999999   78999999999999998877     899999999865433222111122234567999999988888


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +.++|+||||++++++++ |..||...+
T Consensus       191 ~~~~Dv~slG~il~ellt~g~~p~~~~~  218 (269)
T cd05044         191 TTQSDVWSFGVLMWEILTLGQQPYPALN  218 (269)
T ss_pred             ccchhHHHHHHHHHHHHHcCCCCCcccC
Confidence            999999999999999998 999987554

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.89  E-value=1.8e-23  Score=131.04  Aligned_cols=99  Identities=23%  Similarity=0.359  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       138 ~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (296)
T cd05051         138 QIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSD  214 (296)
T ss_pred             HHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccch
Confidence            6889999999   8999999999999999999999999999987543322222222234566899999988878899999


Q ss_pred             HHHHHHHHHHHHh--CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT--GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~--g~~p~~~~~  103 (110)
                      +||+|+++|++++  +..||...+
T Consensus       215 v~slG~~l~el~~~~~~~p~~~~~  238 (296)
T cd05051         215 VWAFGVTLWEILTLCREQPYEHLT  238 (296)
T ss_pred             hhhhHHHHHHHHhcCCCCCCCCcC
Confidence            9999999999998  667775543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.89  E-value=3e-23  Score=130.56  Aligned_cols=98  Identities=27%  Similarity=0.503  Sum_probs=82.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||++.........  .....++..|++||.+....++.++|
T Consensus       123 ~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (296)
T cd06655         123 ECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  197 (296)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc--CCCcCCCccccCcchhcCCCCCchhh
Confidence            6788999999   899999999999999999999999999987654332211  11225677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       198 v~slGvil~~lltg~~pf~~~~~  220 (296)
T cd06655         198 IWSLGIMAIEMVEGEPPYLNENP  220 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.89  E-value=2.5e-23  Score=130.94  Aligned_cols=98  Identities=28%  Similarity=0.498  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|||   +.+++|+||+|+||+++.++.++++|||++..........  ....+++.|++||.+....++.++|
T Consensus       123 ~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (297)
T cd06656         123 ECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  197 (297)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc--CcccCCccccCHHHHcCCCCCcHHH
Confidence            6789999999   8999999999999999999999999999886554322111  1225677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       198 i~slGvil~~l~tg~~pf~~~~~  220 (297)
T cd06656         198 IWSLGIMAIEMVEGEPPYLNENP  220 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCc
Confidence            99999999999999999976554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.89  E-value=1e-23  Score=131.12  Aligned_cols=101  Identities=23%  Similarity=0.330  Sum_probs=84.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC----CceEEecccccccCCCC-CcceecccccccccccccceeccCC-
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESIPDG-ETHIKDAIPIGIMGFVATEYVTTGD-   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~pe~~~~~~-   75 (110)
                      ||+.|+.|||   ++=++|||+||.||++..+    |.+|++|+|+++.+... .+.........|..|.|||.+.+.. 
T Consensus       140 Qil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h  216 (438)
T KOG0666|consen  140 QILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH  216 (438)
T ss_pred             HHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhccccc
Confidence            7899999999   7889999999999999766    89999999999877542 2222222335678899999999876 


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+.+.|+|+.||++.|+++-++.|.+++..
T Consensus       217 YT~AiDvWAiGCIfaElLtl~PlF~g~E~k  246 (438)
T KOG0666|consen  217 YTKAIDVWAIGCIFAELLTLEPLFKGREEK  246 (438)
T ss_pred             ccchhhhHHHHHHHHHHHccCccccchhhh
Confidence            889999999999999999999999877543

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.89  E-value=3.2e-23  Score=129.30  Aligned_cols=93  Identities=17%  Similarity=0.325  Sum_probs=76.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      ||++|+.|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|++||.+.+.. ++.++
T Consensus       107 qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  181 (284)
T cd07839         107 QLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSI  181 (284)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc--CCCccccCCcChHHHhCCcccCcHH
Confidence            7899999999   8999999999999999999999999999987543222111  1224567899999886644 68899


Q ss_pred             hHHHHHHHHHHHHhCCCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~   99 (110)
                      |+||+|++++++++|..|+
T Consensus       182 DiwslG~il~~l~tg~~p~  200 (284)
T cd07839         182 DMWSAGCIFAELANAGRPL  200 (284)
T ss_pred             HHHHHHHHHHHHHhcCCCC
Confidence            9999999999999988775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=2.3e-23  Score=128.42  Aligned_cols=99  Identities=24%  Similarity=0.403  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++........... ....++..|++||.+....++.++|
T Consensus       108 qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~D  183 (256)
T cd05059         108 DVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS-QGTKFPVKWAPPEVFDYSRFSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccccccc-CCCCCCccccCHHHhccCCCCchhh
Confidence            6889999999   89999999999999999999999999998865432211111 1112334699999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||...+.
T Consensus       184 i~slG~il~~l~~~g~~p~~~~~~  207 (256)
T cd05059         184 VWSFGVLMWEVFSEGKMPYERFSN  207 (256)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCH
Confidence            9999999999998 8899876543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.89  E-value=2.2e-23  Score=128.37  Aligned_cols=99  Identities=26%  Similarity=0.479  Sum_probs=81.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++......... .......++..|++||.+....++.++
T Consensus       105 qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~  181 (257)
T cd05040         105 QIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHAS  181 (257)
T ss_pred             HHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchh
Confidence            7889999999   899999999999999999999999999998765432211 111122456679999999888889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCC
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      |+||+|++++++++ |..||...+
T Consensus       182 Di~slG~~l~el~t~g~~p~~~~~  205 (257)
T cd05040         182 DVWMFGVTLWEMFTYGEEPWAGLS  205 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999998 999986544

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.89  E-value=6.4e-23  Score=128.60  Aligned_cols=97  Identities=25%  Similarity=0.333  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.++.|||   +.+++|+|++|.||+++.++.++++|||++..........  ....++..|++||.+.     ...+
T Consensus       118 ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  192 (292)
T cd06644         118 QMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR--DSFIGTPYWMAPEVVMCETMKDTPY  192 (292)
T ss_pred             HHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc--ceecCCccccCceeeccccccCCCC
Confidence            6889999999   8999999999999999999999999999876543222111  1224677899999884     3346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|+++|++++|..||...+
T Consensus       193 ~~~~Dv~slG~il~el~~g~~p~~~~~  219 (292)
T cd06644         193 DYKADIWSLGITLIEMAQIEPPHHELN  219 (292)
T ss_pred             CchhhhHhHHHHHHHHhcCCCCCcccc
Confidence            788999999999999999999986644

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.89  E-value=3.5e-23  Score=128.22  Aligned_cols=99  Identities=26%  Similarity=0.354  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+|++|+||+++.++.++++|||++......... .......++..|++||.+.+..++.++
T Consensus       114 qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (266)
T cd06651         114 QILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKA  190 (266)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchh
Confidence            6889999999   899999999999999999999999999998654321111 111122467789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||...+
T Consensus       191 Dv~slG~i~~el~~g~~pf~~~~  213 (266)
T cd06651         191 DVWSLGCTVVEMLTEKPPWAEYE  213 (266)
T ss_pred             hhHHHHHHHHHHHHCCCCccccc
Confidence            99999999999999999997553

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=3.4e-23  Score=130.04  Aligned_cols=98  Identities=22%  Similarity=0.395  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++................++..|++||......++.++|
T Consensus       137 ~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  213 (295)
T cd05097         137 QIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASD  213 (295)
T ss_pred             HHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhh
Confidence            6889999999   8999999999999999999999999999987554322222222223456799999988888899999


Q ss_pred             HHHHHHHHHHHHh--CCCCcccC
Q 043407           82 VFSFGVLLLVLLT--GQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~--g~~p~~~~  102 (110)
                      +||||++++++++  +..||...
T Consensus       214 vwSlG~~l~el~~~~~~~p~~~~  236 (295)
T cd05097         214 VWAFGVTLWEMFTLCKEQPYSLL  236 (295)
T ss_pred             HHHHHHHHHHHHHcCCCCCCccc
Confidence            9999999999988  56777654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.89  E-value=3.2e-23  Score=132.34  Aligned_cols=99  Identities=22%  Similarity=0.401  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceecc-CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTT-GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~   79 (110)
                      |++.|+++||   +.+++|+||||.||+++.++.++++|||++........... .....++..|+|||.+.. ..++.+
T Consensus       114 ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (336)
T cd07849         114 QILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKA  190 (336)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcH
Confidence            7889999999   89999999999999999999999999999876533221111 112356778999998654 457889


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|+||+|++++++++|+.||.+.+
T Consensus       191 ~DvwslGvil~el~~G~~~f~~~~  214 (336)
T cd07849         191 IDIWSVGCILAEMLSNRPLFPGKD  214 (336)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999997543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.89  E-value=2.3e-23  Score=128.63  Aligned_cols=99  Identities=29%  Similarity=0.443  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........... ....++..|++||......++.++|
T Consensus       110 ~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  185 (260)
T cd05070         110 QVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc-cCCCCCccccChHHHhcCCCcchhh
Confidence            6889999999   89999999999999999999999999999876543221111 1112445799999988888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||++++++++ |..||.+.+.
T Consensus       186 i~slG~~l~~l~~~g~~p~~~~~~  209 (260)
T cd05070         186 VWSFGILLTELVTKGRVPYPGMNN  209 (260)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999998 8899976554

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.89  E-value=2.5e-23  Score=129.18  Aligned_cols=96  Identities=26%  Similarity=0.420  Sum_probs=78.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||+||+++.++.++++|||++.......   .......+..|++||.+....++.++|
T Consensus       120 ~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~D  193 (270)
T cd05047         120 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSD  193 (270)
T ss_pred             HHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCccccchhh---hccCCCCccccCChHHHccCCCCchhh
Confidence            6889999999   8999999999999999999999999999875322111   111112345699999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||++++++++ |..||.+.+
T Consensus       194 i~slG~il~el~~~g~~pf~~~~  216 (270)
T cd05047         194 VWSYGVLLWEIVSLGGTPYCGMT  216 (270)
T ss_pred             HHHHHHHHHHHHcCCCCCccccC
Confidence            9999999999997 999996554

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.89  E-value=4e-23  Score=130.46  Aligned_cols=101  Identities=23%  Similarity=0.313  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC----CCceEEecccccccCCCCCc-ceecccccccccccccceeccC-C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE----DHVAKLFDFSLAESIPDGET-HIKDAIPIGIMGFVATEYVTTG-D   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~----~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~-~   75 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.    ++.++++|||++........ ........++..|+|||.+.+. .
T Consensus       116 qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (316)
T cd07842         116 QILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARH  192 (316)
T ss_pred             HHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCC
Confidence            7889999999   899999999999999999    89999999999876533222 1111222467789999987654 4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++.++|+||+|++++++++|+.||.+.+..
T Consensus       193 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~  222 (316)
T cd07842         193 YTKAIDIWAIGCIFAELLTLEPIFKGREAK  222 (316)
T ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCcCCccc
Confidence            788999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.89  E-value=4.4e-23  Score=127.67  Aligned_cols=98  Identities=24%  Similarity=0.308  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+++||   +.+++|+||+|.||+++.++.++++|||.+.......... ......++..|++||.+....++.++
T Consensus       114 ~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (265)
T cd06652         114 QILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKA  190 (265)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcch
Confidence            6889999999   8899999999999999999999999999886543211111 11122467789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||||+++|++++|..||...
T Consensus       191 Dv~slG~il~el~~g~~p~~~~  212 (265)
T cd06652         191 DIWSVGCTVVEMLTEKPPWAEF  212 (265)
T ss_pred             hHHHHHHHHHHHhhCCCCCCcc
Confidence            9999999999999999999754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.89  E-value=1.5e-23  Score=132.26  Aligned_cols=97  Identities=26%  Similarity=0.417  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++.......   .......+..|++||.+....++.++|
T Consensus       132 qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  205 (303)
T cd05088         132 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSD  205 (303)
T ss_pred             HHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCcccchhh---hcccCCCcccccCHHHHhccCCccccc
Confidence            6889999999   8999999999999999999999999999875322111   111112345699999988778889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       206 i~slG~il~ellt~g~~p~~~~~~  229 (303)
T cd05088         206 VWSYGVLLWEIVSLGGTPYCGMTC  229 (303)
T ss_pred             chhhhhHHHHHHhcCCCCcccCCh
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.89  E-value=5e-23  Score=129.02  Aligned_cols=94  Identities=27%  Similarity=0.500  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++......     .....+++.|++||.+.....+.++|
T Consensus       109 qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~D  180 (290)
T cd05580         109 QVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVD  180 (290)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCcccc
Confidence            7889999999   899999999999999999999999999998765433     12225778899999998777888999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       181 i~slG~il~~l~~g~~p~~~~~  202 (290)
T cd05580         181 WWALGILIYEMLAGYPPFFDDN  202 (290)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.89  E-value=2.3e-23  Score=139.43  Aligned_cols=96  Identities=26%  Similarity=0.361  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC--CCc--eEEecccccccCCCCCcceecccccccccccccceecc-CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHV--AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~--~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~   76 (110)
                      +++.||.|||   +++|+||||||.||++..  ++.  -|++|||.++...++.   ......||..|++||+... ..+
T Consensus       128 d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y  201 (732)
T KOG4250|consen  128 DLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKY  201 (732)
T ss_pred             HHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCc
Confidence            4678999999   899999999999999842  233  3999999998876655   3344579999999999984 778


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +..+|.||||+++|+++||..||....
T Consensus       202 ~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  202 TATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             CceeehhhhhhHHHHHhccCCCCCcCC
Confidence            999999999999999999999996543

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.89  E-value=6.3e-23  Score=126.31  Aligned_cols=96  Identities=33%  Similarity=0.558  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-cCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-TGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~   80 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||.+........  ......++..|+|||... ....+.++
T Consensus       106 qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  180 (260)
T PF00069_consen  106 QILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE--NFNPFVGTPEYMAPEVLQQGKKYTRKS  180 (260)
T ss_dssp             HHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS--EBSSSSSSGGGSCHHHHTTTSSBSTHH
T ss_pred             cccccccccc---cccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            7889999999   78999999999999999999999999999875422111  222235777899999988 67788999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|..||...
T Consensus       181 Di~slG~il~~l~~~~~p~~~~  202 (260)
T PF00069_consen  181 DIWSLGIILYELLTGKLPFEES  202 (260)
T ss_dssp             HHHHHHHHHHHHHHSSSSSTTS
T ss_pred             cccccccccccccccccccccc
Confidence            9999999999999999999865

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.89  E-value=4.2e-23  Score=127.23  Aligned_cols=99  Identities=21%  Similarity=0.394  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||.+......... ......++..|++||.+....++.++|
T Consensus       108 ~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd05114         108 DVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SSSGAKFPVKWSPPEVFNFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-ccCCCCCchhhCChhhcccCccchhhh
Confidence            6889999999   899999999999999999999999999987654322211 111112445799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |+.||...+.
T Consensus       184 i~s~G~~l~el~~~g~~p~~~~~~  207 (256)
T cd05114         184 VWSFGVLMWEVFTEGKMPFEKKSN  207 (256)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999999 8999976653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.89  E-value=4e-23  Score=127.81  Aligned_cols=97  Identities=25%  Similarity=0.391  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+....++.++|
T Consensus       114 ~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~D  188 (267)
T cd08229         114 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc--ccccCCcCccCHHHhcCCCccchhh
Confidence            6889999999   8999999999999999999999999999876543322111  1224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+..
T Consensus       189 v~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08229         189 IWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             HHHHHHHHHHHHhCCCCccccc
Confidence            9999999999999999996543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=2.2e-24  Score=151.46  Aligned_cols=98  Identities=28%  Similarity=0.415  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee--cccccccccccccceeccCC---C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DAIPIGIMGFVATEYVTTGD---Y   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~---~   76 (110)
                      |++.|+.|||   +.+|+|||+||.||+++.++.+|+.|||-+.......+...  ...-.||+-|||||++.+..   .
T Consensus      1342 qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~ 1418 (1509)
T KOG4645|consen 1342 QLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGH 1418 (1509)
T ss_pred             HHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCC
Confidence            7899999999   89999999999999999999999999998876543321111  11225999999999997654   4


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ..+.|+||+||++.||+||+.||..-
T Consensus      1419 ~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1419 GGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred             CcchhhhcccceEEEeecCCCchhhc
Confidence            57799999999999999999999643

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.89  E-value=4.3e-23  Score=127.77  Aligned_cols=98  Identities=23%  Similarity=0.401  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +++++|+||+|.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       114 ~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~D  190 (266)
T cd05033         114 GIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASD  190 (266)
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccc
Confidence            6889999999   8999999999999999999999999999987664222211111223456799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~  102 (110)
                      +||+|++++++++ |..||...
T Consensus       191 v~slG~~l~~l~~~g~~p~~~~  212 (266)
T cd05033         191 VWSFGIVMWEVMSYGERPYWDM  212 (266)
T ss_pred             hHHHHHHHHHHHccCCCCCCCC
Confidence            9999999999997 99998543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.89  E-value=5e-23  Score=126.44  Aligned_cols=99  Identities=23%  Similarity=0.441  Sum_probs=79.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|||   +.+++|+|++|.||+++.++.++++|||++.................+..|++||.+.+..++.++|
T Consensus       101 ~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  177 (251)
T cd05041         101 DAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESD  177 (251)
T ss_pred             HHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchh
Confidence            5788999999   8999999999999999999999999999987544222211111122345699999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||...+
T Consensus       178 i~slG~i~~~l~t~~~~p~~~~~  200 (251)
T cd05041         178 VWSYGILLWETFSLGDTPYPGMS  200 (251)
T ss_pred             HHHHHHHHHHHHhccCCCCccCC
Confidence            9999999999998 888887654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.89  E-value=4.5e-23  Score=132.00  Aligned_cols=94  Identities=26%  Similarity=0.441  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|++|||   +.+++||||+|.||+++.++.++++|||++........     ...++..|++||.+.. ..++.++
T Consensus       125 qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  196 (342)
T cd07879         125 QMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVILNWMHYNQTV  196 (342)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC-----CceeeecccChhhhcCccccCchH
Confidence            6889999999   88999999999999999999999999999865432211     1245678999998865 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||.+.+
T Consensus       197 Dv~slGvil~el~~g~~pf~~~~  219 (342)
T cd07879         197 DIWSVGCIMAEMLTGKTLFKGKD  219 (342)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999998654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.89  E-value=3.1e-23  Score=129.31  Aligned_cols=98  Identities=22%  Similarity=0.365  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.++.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+.+ ..++.++
T Consensus       108 ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  182 (286)
T cd07847         108 QTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY--TDYVATRWYRAPELLVGDTQYGPPV  182 (286)
T ss_pred             HHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc--cCcccccccCCHHHHhCCCCcCchh
Confidence            7889999999   7999999999999999999999999999987654432211  12246678999998765 3467899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       183 Di~slG~i~~~l~~g~~p~~~~~~  206 (286)
T cd07847         183 DVWAIGCVFAELLTGQPLWPGKSD  206 (286)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999986654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=6.3e-23  Score=127.11  Aligned_cols=93  Identities=23%  Similarity=0.350  Sum_probs=75.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc-------eEEecccccccCCCCCcceecccccccccccccceec-c
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-T   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~-------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-~   73 (110)
                      |++.|++|||   +.+++||||||+||+++.++.       ++++|||++.......      ...++..|++||.+. .
T Consensus       113 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~~  183 (262)
T cd05077         113 QLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ------ECVERIPWIAPECVEDS  183 (262)
T ss_pred             HHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc------cccccccccChhhhcCC
Confidence            7899999999   899999999999999976553       7999999876543221      124667899999886 4


Q ss_pred             CCCCchhhHHHHHHHHHHHH-hCCCCcccCC
Q 043407           74 GDYNEKCDVFSFGVLLLVLL-TGQKLYSIDE  103 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~-~g~~p~~~~~  103 (110)
                      ..++.++|+||+|+++|+++ .|..||....
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~  214 (262)
T cd05077         184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKT  214 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Confidence            56788999999999999997 5888887654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.89  E-value=2.2e-23  Score=128.34  Aligned_cols=98  Identities=21%  Similarity=0.339  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|.||++++++.++++|||.+..........  ....+++.|++||++.....+.++|
T Consensus       108 ~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~D  182 (255)
T cd08219         108 QMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA--CTYVGTPYYVPPEIWENMPYNNKSD  182 (255)
T ss_pred             HHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc--ccccCCccccCHHHHccCCcCchhh
Confidence            6889999999   8999999999999999999999999999986554322211  1224777899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       183 v~slG~i~~~l~~g~~p~~~~~~  205 (255)
T cd08219         183 IWSLGCILYELCTLKHPFQANSW  205 (255)
T ss_pred             hhhhchhheehhhccCCCCCCCH
Confidence            99999999999999999976553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=2.6e-23  Score=141.32  Aligned_cols=98  Identities=28%  Similarity=0.426  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccc-cccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP-IGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      ||+.||+||+   +.+++|||+..+||++..+..+|++|||+++.............. .-+.+|||||.+....++.++
T Consensus       426 QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kS  502 (609)
T KOG0200|consen  426 QIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKS  502 (609)
T ss_pred             HHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccc
Confidence            8999999999   889999999999999999999999999999865544333322110 124469999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccC
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~  102 (110)
                      |+||||+++||+.+ |..||.+.
T Consensus       503 DVWSfGI~L~EifsLG~~PYp~~  525 (609)
T KOG0200|consen  503 DVWSFGILLWEIFTLGGTPYPGI  525 (609)
T ss_pred             hhhHHHHHHHHHhhCCCCCCCCC
Confidence            99999999999998 99999873

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=6.2e-23  Score=129.87  Aligned_cols=100  Identities=25%  Similarity=0.398  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc---------------------------e
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH---------------------------I   54 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~---------------------------~   54 (110)
                      |+++|++|||   +.+++|+||||+||+++.++.++++|||++.........                           .
T Consensus       111 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (316)
T cd05574         111 EVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSF  187 (316)
T ss_pred             HHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccC
Confidence            7889999999   899999999999999999999999999987643221100                           0


Q ss_pred             ecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           55 KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        55 ~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ......|+..|++||++.+..++.++|+||+|+++|++++|..||.+.+.
T Consensus       188 ~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         188 RSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             CCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence            01122467789999999888889999999999999999999999976543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=4.5e-23  Score=128.17  Aligned_cols=98  Identities=28%  Similarity=0.438  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|+||+++.++.++++|||++........  ......++..|++||.+.+..++.++|
T Consensus       106 ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~sD  180 (274)
T cd06609         106 EVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS--KRNTFVGTPFWMAPEVIKQSGYDEKAD  180 (274)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc--ccccccCCccccChhhhccCCCCchhh
Confidence            6889999999   89999999999999999999999999999876643321  112235677899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||...++
T Consensus       181 v~slG~il~~l~tg~~p~~~~~~  203 (274)
T cd06609         181 IWSLGITAIELAKGEPPLSDLHP  203 (274)
T ss_pred             HHHHHHHHHHHHhCCCCcccCch
Confidence            99999999999999999976543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.89  E-value=4e-23  Score=127.82  Aligned_cols=97  Identities=24%  Similarity=0.385  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++.........  .....++..|++||.+....++.++|
T Consensus       114 ~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~aPE~~~~~~~~~~~D  188 (267)
T cd08228         114 QLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH--HhcCCCCccccChhhhccCCCCchhh
Confidence            6889999999   899999999999999999999999999987655432211  11224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|..||....
T Consensus       189 i~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         189 IWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             HHHHHHHHHHHhcCCCCCcccc
Confidence            9999999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.89  E-value=5.1e-23  Score=127.38  Aligned_cols=99  Identities=28%  Similarity=0.458  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc----ceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET----HIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|+.|||   +.+++|+||+|.||++++++.++++|||.++.......    ........++..|++||.+....++
T Consensus       114 ~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  190 (267)
T cd06628         114 QILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYT  190 (267)
T ss_pred             HHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCC
Confidence            6889999999   89999999999999999999999999999876542111    1111122467789999999888888


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++|+||+|++++++++|..||...+
T Consensus       191 ~~~Dv~slG~il~~l~~g~~p~~~~~  216 (267)
T cd06628         191 RKADIWSLGCLVVEMLTGKHPFPDCT  216 (267)
T ss_pred             chhhhHHHHHHHHHHhhCCCCCCCcc
Confidence            99999999999999999999997643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.89  E-value=5.1e-23  Score=143.44  Aligned_cols=97  Identities=18%  Similarity=0.199  Sum_probs=72.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc-------------------eEEecccccccCCCCCc----------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-------------------AKLFDFSLAESIPDGET----------   52 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~-------------------~~l~dfg~~~~~~~~~~----------   52 (110)
                      ||+.||.|||   +.+|+||||||.||+++..+.                   ++++|||+++.......          
T Consensus        88 qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~  164 (793)
T PLN00181         88 QIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVK  164 (793)
T ss_pred             HHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccc
Confidence            8999999999   899999999999999965444                   45555555432110000          


Q ss_pred             ----ceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           53 ----HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        53 ----~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                          ........+++.|+|||++.+..++.++|+|||||++||+++|..|+..
T Consensus       165 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        165 KQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             cCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence                0000112467789999999988899999999999999999998888753

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=3.2e-24  Score=131.81  Aligned_cols=102  Identities=23%  Similarity=0.387  Sum_probs=85.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      ||+.|++|||   +.+|.||||||.|.++.++...|++|||+++.........+ .....+..|.+||++.+.+ |+...
T Consensus       164 QILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM-TqEVVTQYYRAPEiLMGaRhYs~Av  239 (449)
T KOG0664|consen  164 QILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM-THEVVTQYYRAPELLMGARRYTGAV  239 (449)
T ss_pred             HHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchhhhhhh-HHHHHHHHhccHHHhhcchhhcCcc
Confidence            7899999999   89999999999999999999999999999986543322222 2235677899999998765 78999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      |+||.||++.|++.++..|+..++.++
T Consensus       240 DiWSVGCIFaELLgRrILFQAq~PiqQ  266 (449)
T KOG0664|consen  240 DIWSVGCIFAELLQRKILFQAAGPIEQ  266 (449)
T ss_pred             ceehhhHHHHHHHhhhhhhhccChHHH
Confidence            999999999999999999987766544

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.9e-23  Score=129.36  Aligned_cols=94  Identities=26%  Similarity=0.511  Sum_probs=84.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +|+.|+.|||   +++||.||+|.+|++++..+.+|+.|+|.++....+..  ...+.+|++.|.|||++.+..|+..+|
T Consensus       359 ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd--~tstfcgtpnyiapeilrgeeygfsvd  433 (593)
T KOG0695|consen  359 EICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVD  433 (593)
T ss_pred             HHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCCCCc--ccccccCCCcccchhhhcccccCceeh
Confidence            5788999999   89999999999999999999999999999986543332  334558999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~  100 (110)
                      .|++|++++||+.|+.||.
T Consensus       434 wwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  434 WWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             HHHHHHHHHHHHcCCCCcc
Confidence            9999999999999999995

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=5.9e-23  Score=126.63  Aligned_cols=100  Identities=25%  Similarity=0.461  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   ..+++|+||+|.||+++.++.++++|||++........... .....++..|++||.+....++.++
T Consensus       103 qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05060         103 QVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKS  179 (257)
T ss_pred             HHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccc
Confidence            6889999999   78999999999999999999999999999876543222111 1111234579999999888889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|++++++++ |..||...+.
T Consensus       180 Di~slG~~l~~~~~~g~~p~~~~~~  204 (257)
T cd05060         180 DVWSYGVTLWEAFSYGAKPYGEMKG  204 (257)
T ss_pred             hHHHHHHHHHHHHcCCCCCcccCCH
Confidence            99999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.89  E-value=8.1e-23  Score=126.85  Aligned_cols=99  Identities=19%  Similarity=0.280  Sum_probs=75.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-------C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-------G   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-------~   74 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++................++..|++||++..       .
T Consensus       107 ~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (268)
T cd05086         107 EIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITA  183 (268)
T ss_pred             HHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccC
Confidence            6889999999   89999999999999999999999999998753222111111112246778999998743       2


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCCcccCC
Q 043407           75 DYNEKCDVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      .++.++|+||||++++|+++ +..||...+
T Consensus       184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~  213 (268)
T cd05086         184 EQTKPSNVWALGVTLWELFENAAQPYSHLS  213 (268)
T ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCC
Confidence            34678999999999999997 567886544

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.89  E-value=4.1e-23  Score=130.43  Aligned_cols=99  Identities=22%  Similarity=0.361  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+.+ ..++.++
T Consensus       116 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  190 (309)
T cd07845         116 QLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM--TPKVVTLWYRAPELLLGCTTYTTAI  190 (309)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCC--CcccccccccChhhhcCCCCcCchH
Confidence            7889999999   8999999999999999999999999999987654322111  11134667999998865 4478899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++|++++|..||.+.+..
T Consensus       191 DvwslG~il~el~~g~~~f~~~~~~  215 (309)
T cd07845         191 DMWAVGCILAELLAHKPLLPGKSEI  215 (309)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=5.8e-23  Score=126.64  Aligned_cols=97  Identities=28%  Similarity=0.384  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC---CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||.+.........  .....++..|++||.+...   .++.
T Consensus       109 ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~~~~~~~~  183 (262)
T cd06613         109 ETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK--RKSFIGTPYWMAPEVAAVERKGGYDG  183 (262)
T ss_pred             HHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhc--cccccCCccccCchhhcccccCCcCc
Confidence            6889999999   899999999999999999999999999987654332111  1122467789999998766   7788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||...+
T Consensus       184 ~~Di~slG~~l~~~~tg~~p~~~~~  208 (262)
T cd06613         184 KCDIWALGITAIELAELQPPMFDLH  208 (262)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.89  E-value=6.4e-23  Score=128.40  Aligned_cols=97  Identities=21%  Similarity=0.386  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |+++|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+.+ ..++.++
T Consensus       111 ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  185 (291)
T cd07844         111 QLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY--SNEVVTLWYRPPDVLLGSTEYSTSL  185 (291)
T ss_pred             HHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc--cccccccccCCcHHhhcCcccCcHH
Confidence            7899999999   8999999999999999999999999999876432211111  11135667999998865 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       186 Dv~slG~il~~l~~g~~~~~~~~  208 (291)
T cd07844         186 DMWGVGCIFYEMATGRPLFPGST  208 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCc
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=2.5e-23  Score=128.78  Aligned_cols=100  Identities=36%  Similarity=0.571  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++|++|+++||+++.++.+|++|||+.....................|++||.+....++.++|
T Consensus       111 ~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksD  187 (259)
T PF07714_consen  111 QIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSD  187 (259)
T ss_dssp             HHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHH
T ss_pred             cccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999   7899999999999999999999999999987663333333333334667899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||...+.
T Consensus       188 VysfG~~l~ei~~~~~~p~~~~~~  211 (259)
T PF07714_consen  188 VYSFGMLLYEILTLGKFPFSDYDN  211 (259)
T ss_dssp             HHHHHHHHHHHHTTSSGTTTTSCH
T ss_pred             cccccccccccccccccccccccc
Confidence            9999999999999 7889876543

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.89  E-value=6.4e-23  Score=126.27  Aligned_cols=95  Identities=29%  Similarity=0.482  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++.........     ...+..|++||.+....++.++|
T Consensus       108 qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~y~~pe~~~~~~~~~~~D  179 (254)
T cd05083         108 DVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDN-----SKLPVKWTAPEALKHKKFSSKSD  179 (254)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCC-----CCCCceecCHHHhccCCcCchhh
Confidence            6889999999   899999999999999999999999999988654322111     12345799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||...+.
T Consensus       180 v~slG~~l~el~~~g~~p~~~~~~  203 (254)
T cd05083         180 VWSYGVLLWEVFSYGRAPYPKMSL  203 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCccCCH
Confidence            9999999999997 9999976543

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.89  E-value=1.9e-23  Score=129.18  Aligned_cols=97  Identities=27%  Similarity=0.487  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC---CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      ||+.|+.|||   +.+|.|||+||.|+|..   .+...|+.|||+++......   ...+++.|+.|.|||++-..+++.
T Consensus       169 qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~---~L~TPc~TPyYvaPevlg~eKydk  242 (400)
T KOG0604|consen  169 QIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG---DLMTPCFTPYYVAPEVLGPEKYDK  242 (400)
T ss_pred             HHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccCCCc---cccCCcccccccCHHHhCchhcCC
Confidence            6889999999   89999999999999995   44678999999998765432   223446788999999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ..|+||+|+++|-++.|.+||-+...
T Consensus       243 scdmwSlgVimYIlLCGyPPFYS~hg  268 (400)
T KOG0604|consen  243 SCDMWSLGVIMYILLCGYPPFYSNHG  268 (400)
T ss_pred             CCCccchhHHHHHhhcCCCcccccCC
Confidence            99999999999999999999965544

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.89  E-value=7.6e-23  Score=125.76  Aligned_cols=98  Identities=30%  Similarity=0.476  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   ..+++|+|++|.||+++.++.++++|||++........  ......++..|++||.+.+..++.++|
T Consensus       107 ~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~D  181 (256)
T cd06612         107 QTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKAD  181 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhh
Confidence            6889999999   88999999999999999999999999999876543321  112224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.....
T Consensus       182 i~s~G~il~~l~~g~~p~~~~~~  204 (256)
T cd06612         182 IWSLGITAIEMAEGKPPYSDIHP  204 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcch
Confidence            99999999999999999875543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.88  E-value=4.5e-23  Score=127.70  Aligned_cols=97  Identities=28%  Similarity=0.396  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.|+.|||   ..+++|+||+|.||+++.++.++++|||++........  ......++..|+|||.+.   ...++.
T Consensus       114 ~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (267)
T cd06645         114 ETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA--KRKSFIGTPYWMAPEVAAVERKGGYNQ  188 (267)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc--ccccccCcccccChhhhccccCCCCCc
Confidence            6889999999   78999999999999999999999999999865432211  112235788899999874   344778


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||....
T Consensus       189 ~~DvwSlG~il~~l~~~~~p~~~~~  213 (267)
T cd06645         189 LCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             hhhhHHHHHHHHHHhcCCCCccccc
Confidence            9999999999999999999985443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.88  E-value=6.4e-23  Score=126.65  Aligned_cols=99  Identities=28%  Similarity=0.460  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++|+||+|.|+++++++.++++|||++........... ....++..|++||.+....++.++|
T Consensus       110 ~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~pe~~~~~~~~~~~D  185 (260)
T cd05067         110 QIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSD  185 (260)
T ss_pred             HHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc-cCCcccccccCHHHhccCCcCcccc
Confidence            6889999999   89999999999999999999999999999865542221111 1113456799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       186 i~slG~~l~el~~~g~~p~~~~~~  209 (260)
T cd05067         186 VWSFGILLTEIVTYGRIPYPGMTN  209 (260)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCh
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.88  E-value=7.2e-23  Score=126.37  Aligned_cols=98  Identities=21%  Similarity=0.407  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||.+......... ......++..|++||......++.++|
T Consensus       108 ~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~~~~~~~D  183 (256)
T cd05113         108 DVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLLYSKFSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee-ecCCCccChhhCCHHHHhcCcccchhH
Confidence            6889999999   899999999999999999999999999987655332211 111113456799999998878889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|+++|++++ |..||...+
T Consensus       184 i~slG~~l~~l~~~g~~p~~~~~  206 (256)
T cd05113         184 VWAFGVLMWEVYSLGKMPYERFN  206 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCC
Confidence            9999999999998 999987554

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.88  E-value=1.1e-22  Score=124.84  Aligned_cols=98  Identities=24%  Similarity=0.420  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|+|   +.+++|+|++|+||+++.++.++++|||++.......... .....++..|++||++....++.++|
T Consensus       101 ~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  176 (250)
T cd05085         101 DAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS-SGLKQIPIKWTAPEALNYGRYSSESD  176 (250)
T ss_pred             HHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecccccccc-CCCCCCcccccCHHHhccCCCCchhH
Confidence            6788999999   8999999999999999999999999999886543221111 11112345799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||.+.+
T Consensus       177 i~slG~ll~~~~~~g~~p~~~~~  199 (250)
T cd05085         177 VWSYGILLWETFSLGVCPYPGMT  199 (250)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCC
Confidence            9999999999998 999997654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.88  E-value=8.9e-23  Score=133.18  Aligned_cols=99  Identities=26%  Similarity=0.437  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................++..|++||.+....++.++|
T Consensus       247 qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         247 QVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             HHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            7889999999   8999999999999999999999999999987543222111112224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++|+++ |..||....
T Consensus       324 vwslGvil~e~l~~g~~P~~~~~  346 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPELP  346 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999998 888986543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=8.6e-23  Score=126.38  Aligned_cols=99  Identities=26%  Similarity=0.328  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++......... .......++..|++||.+.+...+.++
T Consensus       114 ~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (264)
T cd06653         114 QILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKA  190 (264)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccc
Confidence            6889999999   889999999999999999999999999998754321110 011122467789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||...+
T Consensus       191 Di~slG~il~~l~~g~~p~~~~~  213 (264)
T cd06653         191 DVWSVACTVVEMLTEKPPWAEYE  213 (264)
T ss_pred             cHHHHHHHHHHHHhCCCCCCccC
Confidence            99999999999999999997653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.88  E-value=8.3e-23  Score=127.88  Aligned_cols=97  Identities=24%  Similarity=0.471  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+++||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||......++.++|
T Consensus       123 ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (285)
T cd06648         123 AVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPEVISRLPYGTEVD  197 (285)
T ss_pred             HHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc--ccccCCccccCHHHhcCCCCCCccc
Confidence            6789999999   8999999999999999999999999999876543322211  1235778899999988878889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       198 v~slGv~l~ell~g~~p~~~~~  219 (285)
T cd06648         198 IWSLGIMVIEMVDGEPPYFNEP  219 (285)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCC
Confidence            9999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.88  E-value=3e-23  Score=138.38  Aligned_cols=103  Identities=26%  Similarity=0.377  Sum_probs=89.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+.+||||..+||++.++.-+|++|||+++.+.....+... ...-+..||+||.+..++++.++|
T Consensus       499 Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASD  574 (974)
T KOG4257|consen  499 QICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASD  574 (974)
T ss_pred             HHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhh
Confidence            8899999999   899999999999999999999999999999877665544433 223456899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGDRH  108 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~~~  108 (110)
                      +|-||+.+||++. |..||.+-.-.|++
T Consensus       575 VWMFgVCmWEIl~lGvkPfqgvkNsDVI  602 (974)
T KOG4257|consen  575 VWMFGVCMWEILSLGVKPFQGVKNSDVI  602 (974)
T ss_pred             HHHHHHHHHHHHHhcCCccccccccceE
Confidence            9999999999987 99999988776653

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.88  E-value=1e-22  Score=127.95  Aligned_cols=99  Identities=27%  Similarity=0.479  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++..........  ....+++.|++||.+....++.++|
T Consensus       123 ~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~D  197 (293)
T cd06647         123 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  197 (293)
T ss_pred             HHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc--ccccCChhhcCchhhccCCCCchhh
Confidence            6788999999   8999999999999999999999999999876544322211  1224777899999988888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|++++|..||...+..
T Consensus       198 v~slG~ll~~ll~g~~pf~~~~~~  221 (293)
T cd06647         198 IWSLGIMAIEMVEGEPPYLNENPL  221 (293)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChh
Confidence            999999999999999999766543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.88  E-value=8e-23  Score=126.58  Aligned_cols=97  Identities=30%  Similarity=0.414  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++........  ......++..|++||.+.   ...++.
T Consensus       114 qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~  188 (267)
T cd06646         114 ETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQ  188 (267)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcc
Confidence            7889999999   89999999999999999999999999999876532211  111224677899999874   334678


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||...+
T Consensus       189 ~~Dvws~G~il~el~~g~~p~~~~~  213 (267)
T cd06646         189 LCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccc
Confidence            8999999999999999999986543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.88  E-value=9.5e-23  Score=129.99  Aligned_cols=99  Identities=22%  Similarity=0.378  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceecc-CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTT-GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~   78 (110)
                      |++.|+.|||   ..+++|+||||.||+++.++.++++|||++..........  ......++..|++||.... ..++.
T Consensus       113 qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  189 (332)
T cd07857         113 QILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTK  189 (332)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCc
Confidence            7899999999   8999999999999999999999999999987654322111  1112357788999998765 45788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||.+.+
T Consensus       190 ~~Di~slGv~l~~l~~g~~pf~~~~  214 (332)
T cd07857         190 AIDVWSVGCILAELLGRKPVFKGKD  214 (332)
T ss_pred             HHHHHHHHHHHHHHHhCCcCCCCCC
Confidence            9999999999999999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.88  E-value=9.2e-23  Score=125.87  Aligned_cols=98  Identities=31%  Similarity=0.447  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++...........  ...++..|++||......++.++|
T Consensus       112 ~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~~~~~D  186 (261)
T cd05148         112 QVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS--DKKIPYKWTAPEAASHGTFSTKSD  186 (261)
T ss_pred             HHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccccc--CCCCceEecCHHHHccCCCCchhh
Confidence            6889999999   89999999999999999999999999999876543221111  223456799999988888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |+.||.+.+.
T Consensus       187 iwslG~~l~~l~~~g~~p~~~~~~  210 (261)
T cd05148         187 VWSFGILLYEMFTYGQVPYPGMNN  210 (261)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCH
Confidence            9999999999998 8999976553

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.88  E-value=8.8e-23  Score=127.86  Aligned_cols=98  Identities=22%  Similarity=0.377  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-----C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-----Y   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-----~   76 (110)
                      |++.|+++||   +.+++|+||+|.||+++.++.++++|||++.........  .....++..|++||.+....     +
T Consensus       136 qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  210 (291)
T cd06639         136 GALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSY  210 (291)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhccccccc--ccCccCCccccChhhhcCCCCccccc
Confidence            6789999999   899999999999999999999999999988654332211  11224677899999875432     5


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|++++++++|+.||...+.
T Consensus       211 ~~~~Di~slGvi~~el~~g~~p~~~~~~  238 (291)
T cd06639         211 DARCDVWSLGITAIELGDGDPPLFDMHP  238 (291)
T ss_pred             CCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence            7889999999999999999999976543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.88  E-value=1.1e-22  Score=128.37  Aligned_cols=100  Identities=26%  Similarity=0.346  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC-------------cceeccccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-------------THIKDAIPIGIMGFVAT   68 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------~~~~~~~~~~~~~~~~p   68 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||+++......             .........++..|++|
T Consensus       109 ~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  185 (305)
T cd05609         109 ETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP  185 (305)
T ss_pred             HHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCc
Confidence            6789999999   8999999999999999999999999999875311000             00001112466789999


Q ss_pred             ceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           69 EYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        69 e~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |.+....++.++|+||+|++++++++|..||.+.+.
T Consensus       186 E~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~  221 (305)
T cd05609         186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP  221 (305)
T ss_pred             hhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999888889999999999999999999999976644

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.88  E-value=8.5e-23  Score=126.18  Aligned_cols=99  Identities=29%  Similarity=0.489  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.|++++.++.++++|||.+........... ....++..|++||.+....++.++|
T Consensus       110 ~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~D  185 (260)
T cd05073         110 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc-cCCcccccccCHhHhccCCcCcccc
Confidence            6889999999   78999999999999999999999999998865543222111 1113455699999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       186 i~slG~~l~~l~t~g~~p~~~~~~  209 (260)
T cd05073         186 VWSFGILLMEIVTYGRIPYPGMSN  209 (260)
T ss_pred             chHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999998 9999976543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.88  E-value=5.4e-23  Score=128.27  Aligned_cols=98  Identities=23%  Similarity=0.399  Sum_probs=79.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++........  ......++..|++||.+..     ..+
T Consensus       129 qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~  203 (282)
T cd06636         129 EILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATY  203 (282)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCC
Confidence            7899999999   89999999999999999999999999998765432111  1122357788999998752     346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|+++|++++|..||....+
T Consensus       204 ~~~~DvwslG~~l~el~~g~~p~~~~~~  231 (282)
T cd06636         204 DYRSDIWSLGITAIEMAEGAPPLCDMHP  231 (282)
T ss_pred             CcccchhHHHHHHHHHHhCCCCccccCH
Confidence            7789999999999999999999965543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.88  E-value=1.4e-22  Score=125.28  Aligned_cols=97  Identities=25%  Similarity=0.389  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....++..|.+||.+.+..++.++|
T Consensus       114 ~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~D  188 (267)
T cd08224         114 QLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc--cceecCCccccCHHHhccCCCCchhc
Confidence            6889999999   899999999999999999999999999987654332211  11224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       189 i~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08224         189 IWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             HHHHHHHHHHHHHCCCCcccCC
Confidence            9999999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.88  E-value=7.6e-23  Score=127.99  Aligned_cols=99  Identities=23%  Similarity=0.396  Sum_probs=79.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   ..+++|+||+|.||+++.++.++++|||++.................+..|++||.+....++.++|
T Consensus       138 ~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (288)
T cd05050         138 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESD  214 (288)
T ss_pred             HHHHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhH
Confidence            6889999999   8999999999999999999999999999876543222111111113445699999988888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||.+.+
T Consensus       215 v~slG~il~el~~~~~~p~~~~~  237 (288)
T cd05050         215 VWAYGVVLWEIFSYGMQPYYGMA  237 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999997 888886543

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.3e-22  Score=130.11  Aligned_cols=94  Identities=29%  Similarity=0.488  Sum_probs=78.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.......     ....++..|++||.+.. ..++.++
T Consensus       128 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  199 (345)
T cd07877         128 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  199 (345)
T ss_pred             HHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccccccccc-----cccccCCCccCHHHHhCccCCCchh
Confidence            7889999999   8999999999999999999999999999986543221     11246778999998765 4578889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||...+
T Consensus       200 DvwslG~il~el~~g~~pf~~~~  222 (345)
T cd07877         200 DIWSVGCIMAELLTGRTLFPGTD  222 (345)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999996544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=5.2e-23  Score=135.13  Aligned_cols=100  Identities=24%  Similarity=0.518  Sum_probs=86.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE-CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCC-ch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~   79 (110)
                      ||+.|+.|||   +.-++|||+||.|+.+ ..-|.+|+.|||++..+...+..   .+.+|+..|-|||++.+-.|+ ++
T Consensus       126 QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL---~TsCGSLAYSAPEILLGDsYDAPA  199 (864)
T KOG4717|consen  126 QIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL---TTSCGSLAYSAPEILLGDSYDAPA  199 (864)
T ss_pred             HHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh---hcccchhhccCchhhhcCccCCcc
Confidence            7899999999   8899999999999855 67799999999998877554432   345789999999999998876 78


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      +|+||+|+++|.++.|+.||+..+..+.
T Consensus       200 VDiWSLGVILyMLVCGq~PFqeANDSET  227 (864)
T KOG4717|consen  200 VDIWSLGVILYMLVCGQPPFQEANDSET  227 (864)
T ss_pred             hhhhHHHHHHHHHHhCCCccccccchhh
Confidence            9999999999999999999998776653

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.88  E-value=1.1e-22  Score=126.68  Aligned_cols=98  Identities=29%  Similarity=0.442  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++........  ......++..|++||.+....++.++|
T Consensus       109 ~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (277)
T cd06642         109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIKQSAYDFKAD  183 (277)
T ss_pred             HHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcch--hhhcccCcccccCHHHhCcCCCchhhh
Confidence            6789999999   89999999999999999999999999999865443221  112224677899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||....+
T Consensus       184 v~slG~il~el~tg~~p~~~~~~  206 (277)
T cd06642         184 IWSLGITAIELAKGEPPNSDLHP  206 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCcccch
Confidence            99999999999999999875543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.88  E-value=1.2e-22  Score=127.85  Aligned_cols=99  Identities=20%  Similarity=0.344  Sum_probs=79.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc--eecccccccccccccceeccCC-CCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGD-YNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~-~~~   78 (110)
                      |+++|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .......++..|+|||.+.+.. ++.
T Consensus       127 qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  203 (310)
T cd07865         127 MLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGP  203 (310)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCc
Confidence            7899999999   789999999999999999999999999998755332211  1111224667899999876543 678


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||.+.+
T Consensus       204 ~~Di~slG~~l~el~t~~~~~~~~~  228 (310)
T cd07865         204 PIDMWGAGCIMAEMWTRSPIMQGNT  228 (310)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.88  E-value=1.4e-22  Score=125.76  Aligned_cols=99  Identities=24%  Similarity=0.367  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++........... ....++..|++||.+....++.++|
T Consensus       115 ~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  190 (270)
T cd05056         115 QLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKA-SKGKLPIKWMAPESINFRRFTSASD  190 (270)
T ss_pred             HHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccccceec-CCCCccccccChhhhccCCCCchhh
Confidence            6889999999   89999999999999999999999999999875543322111 1112345799999988888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       191 i~slG~il~el~~~g~~pf~~~~~  214 (270)
T cd05056         191 VWMFGVCMWEILMLGVKPFQGVKN  214 (270)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCH
Confidence            9999999999886 9999976543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.88  E-value=2e-24  Score=134.16  Aligned_cols=103  Identities=27%  Similarity=0.424  Sum_probs=89.1

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhhH
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDV   82 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~   82 (110)
                      .++||+|||   ..+=||||||..||++..+|.+|++|||++-...+.....  .+..|++.|||||++..-.|+..+|+
T Consensus       138 TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVI~EIGY~~~ADI  212 (502)
T KOG0574|consen  138 TLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIEEIGYDTKADI  212 (502)
T ss_pred             HHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh--CccccCcccccHHHHHHhccchhhhH
Confidence            367999999   7888999999999999999999999999987665433332  34479999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCcccCCccccccC
Q 043407           83 FSFGVLLLVLLTGQKLYSIDEAGDRHWL  110 (110)
Q Consensus        83 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~  110 (110)
                      ||+|+...||..|++||....+.-.+||
T Consensus       213 WSLGITaIEMAEG~PPYsDIHPMRAIFM  240 (502)
T KOG0574|consen  213 WSLGITAIEMAEGRPPYSDIHPMRAIFM  240 (502)
T ss_pred             hhhcchhhhhhcCCCCcccccccceeEe
Confidence            9999999999999999998887665554

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.88  E-value=1.4e-22  Score=128.13  Aligned_cols=96  Identities=22%  Similarity=0.399  Sum_probs=80.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||.  ..+++|+||+|+||+++.++.++++|||++........    ....++..|++||.+.+..++.++|
T Consensus       107 ~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~D  180 (308)
T cd06615         107 AVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYTVQSD  180 (308)
T ss_pred             HHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccccc----ccCCCCcCccChhHhcCCCCCccch
Confidence            68899999993  25899999999999999999999999998765432211    1235778899999988777889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       181 iwslG~~l~~l~~g~~p~~~~~  202 (308)
T cd06615         181 IWSLGLSLVEMAIGRYPIPPPD  202 (308)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999986544

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.88  E-value=2.1e-22  Score=125.65  Aligned_cols=97  Identities=21%  Similarity=0.385  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.|++|||   +.+++|+|++|.||+++.++.++++|||++.........  .....++..|++||...+.. .+.++
T Consensus       108 ~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  182 (284)
T cd07860         108 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV  182 (284)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc--cccccccccccCCeEEecCCCCCcHH
Confidence            6889999999   899999999999999999999999999988654322111  11123567899999886654 57889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       183 Dv~slG~il~~l~tg~~p~~~~~  205 (284)
T cd07860         183 DIWSLGCIFAEMVTRRALFPGDS  205 (284)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.88  E-value=1.2e-22  Score=127.43  Aligned_cols=97  Identities=23%  Similarity=0.365  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|++||.+.+.. .+.++
T Consensus       114 qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  188 (293)
T cd07843         114 QLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY--TQLVVTLWYRAPELLLGAKEYSTAI  188 (293)
T ss_pred             HHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc--ccccccccccCchhhcCCccccchh
Confidence            7899999999   7899999999999999999999999999887654432111  1224677899999886544 57889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||...+
T Consensus       189 Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         189 DMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.88  E-value=1.4e-22  Score=125.59  Aligned_cols=100  Identities=21%  Similarity=0.352  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++|+|+||.||+++.++.++++|||++.......... .......+..|++||.+....++.++
T Consensus       115 ~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  191 (268)
T cd05063         115 GIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSAS  191 (268)
T ss_pred             HHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHh
Confidence            6789999999   8899999999999999999999999999986554322111 11111223469999999888889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|+++|++++ |..||...+.
T Consensus       192 Dv~slG~il~ell~~g~~p~~~~~~  216 (268)
T cd05063         192 DVWSFGIVMWEVMSFGERPYWDMSN  216 (268)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcCCH
Confidence            99999999999997 9999965543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.88  E-value=1.6e-22  Score=126.76  Aligned_cols=97  Identities=19%  Similarity=0.315  Sum_probs=78.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~   79 (110)
                      |++.|+.|||   +.+++|+||+|.||+++. ++.++++|||++..........  ....+++.|++||.+.+ ..++.+
T Consensus       118 qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~  192 (295)
T cd07837         118 QLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY--THEIVTLWYRAPEVLLGSTHYSTP  192 (295)
T ss_pred             HHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCcccc--CCcccccCCCChHHhhCCCCCCch
Confidence            7899999999   899999999999999998 8899999999886543221111  11135667999998765 346889


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|+||+|++++++++|..||.+.+
T Consensus       193 ~Di~slG~~l~~l~~g~~~~~~~~  216 (295)
T cd07837         193 VDIWSVGCIFAEMSRKQPLFPGDS  216 (295)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCC
Confidence            999999999999999999997654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.88  E-value=1.3e-22  Score=129.60  Aligned_cols=99  Identities=27%  Similarity=0.419  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc---eecccccccccccccceecc-CCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH---IKDAIPIGIMGFVATEYVTT-GDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~-~~~~   77 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........   .......++..|++||.+.. ...+
T Consensus       115 qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  191 (337)
T cd07852         115 QLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYT  191 (337)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecccccc
Confidence            6889999999   899999999999999999999999999988755432211   11112246778999998765 3467


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++|+||+|++++++++|+.||.+..
T Consensus       192 ~~sDi~slG~~l~el~tg~~pf~~~~  217 (337)
T cd07852         192 KGVDMWSVGCILGEMLLGKPLFPGTS  217 (337)
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCC
Confidence            88999999999999999999997554

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.88  E-value=1.3e-22  Score=126.41  Aligned_cols=98  Identities=28%  Similarity=0.451  Sum_probs=82.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||++.........  .....++..|++||.+.+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~D  183 (277)
T cd06640         109 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIQQSAYDSKAD  183 (277)
T ss_pred             HHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccc--cccccCcccccCHhHhccCCCccHHH
Confidence            6789999999   899999999999999999999999999998655432211  11224667899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...++
T Consensus       184 v~slG~il~el~tg~~p~~~~~~  206 (277)
T cd06640         184 IWSLGITAIELAKGEPPNSDMHP  206 (277)
T ss_pred             HHHHHHHHHHHHHCCCCCCCcCh
Confidence            99999999999999999976543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.88  E-value=8.3e-24  Score=133.54  Aligned_cols=97  Identities=25%  Similarity=0.443  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC--------------------CceEEecccccccCCCCCcceecccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--------------------HVAKLFDFSLAESIPDGETHIKDAIPIG   61 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~--------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~   61 (110)
                      |++.++++||   +.+++|.||||.||++.++                    ..++++|||-+.......     .....
T Consensus       200 QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVs  271 (415)
T KOG0671|consen  200 QLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVS  271 (415)
T ss_pred             HHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-----ceeee
Confidence            7899999999   8999999999999998432                    246899999775432222     23368


Q ss_pred             cccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           62 IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        62 ~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      |+.|.|||++.+..++.++|+||+||++.|+.+|...|++++..+
T Consensus       272 TRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E  316 (415)
T KOG0671|consen  272 TRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE  316 (415)
T ss_pred             ccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence            889999999999999999999999999999999999999887443

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.88  E-value=9.2e-23  Score=127.53  Aligned_cols=96  Identities=28%  Similarity=0.450  Sum_probs=78.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC---CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~   78 (110)
                      |++.|++|||+  ..+++|+||+|.||+++.++.++++|||++.........   ....++..|++||.+...   .++.
T Consensus       115 ~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  189 (288)
T cd06616         115 ATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDPSARDGYDV  189 (288)
T ss_pred             HHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc---ccccCccCccCHHHhccccccCCcc
Confidence            67889999993  358999999999999999999999999998654322111   112467789999998766   5788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++|+||+|++++++++|..||...
T Consensus       190 ~~Di~slG~il~el~~g~~p~~~~  213 (288)
T cd06616         190 RSDVWSLGITLYEVATGKFPYPKW  213 (288)
T ss_pred             hhhhhHHHHHHHHHHhCCCCchhc
Confidence            999999999999999999999654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=3.1e-24  Score=140.57  Aligned_cols=99  Identities=28%  Similarity=0.434  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +++.||+|||   ++++|||||..+|+|+..++.+|++|||+++....-.  ......--+.+|+|||.+....++.++|
T Consensus       270 ~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~--~~~~~~klPirWLAPEtl~~~~~s~kTD  344 (474)
T KOG0194|consen  270 DAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV--MKKFLKKLPIRWLAPETLNTGIFSFKTD  344 (474)
T ss_pred             HHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCccee--eccccccCcceecChhhhccCccccccc
Confidence            6788999999   8999999999999999999999999999976543111  1111112456899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+.+ |..||.+....
T Consensus       345 V~sfGV~~~Eif~~g~~Py~g~~~~  369 (474)
T KOG0194|consen  345 VWSFGVLLWEIFENGAEPYPGMKNY  369 (474)
T ss_pred             hhheeeeEEeeeccCCCCCCCCCHH
Confidence            9999999999998 78899887644

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=9.9e-23  Score=125.72  Aligned_cols=99  Identities=32%  Similarity=0.485  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||++++++.++++|||++............ ....+..|++||...+...+.++|
T Consensus       111 ~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~D  186 (261)
T cd05034         111 QIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE-GAKFPIKWTAPEAANYGRFTIKSD  186 (261)
T ss_pred             HHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh-ccCCCccccCHHHhccCCcCchhH
Confidence            6788999999   889999999999999999999999999988665432111111 112345799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |+.||.+.+.
T Consensus       187 i~slG~il~~l~t~g~~p~~~~~~  210 (261)
T cd05034         187 VWSFGILLTEIVTYGRVPYPGMTN  210 (261)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 9999976553

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.88  E-value=1.1e-22  Score=126.91  Aligned_cols=98  Identities=28%  Similarity=0.457  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   ..+++|+|++|.||+++.++.++++|||++.......... .....++..|++||++... .++.++
T Consensus       108 ~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~~  183 (288)
T cd07833         108 QLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP-LTDYVATRWYRAPELLVGDTNYGKPV  183 (288)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc-ccCcccccCCcCCchhcCCCCcCchh
Confidence            6889999999   8999999999999999999999999999987654332211 1122466789999999877 678999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       184 Dv~slG~~l~~l~~g~~~~~~~~  206 (288)
T cd07833         184 DVWAIGCIMAELLDGEPLFPGDS  206 (288)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.88  E-value=1.5e-22  Score=125.01  Aligned_cols=96  Identities=32%  Similarity=0.572  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+++|++|+|   +.+++|+||+|.||+++.++.++++|||++.......   ......++..|++||.+....++.++|
T Consensus       101 ~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~D  174 (262)
T cd05572         101 CVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVD  174 (262)
T ss_pred             HHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhh
Confidence            6889999999   8999999999999999999999999999987654432   112225677899999988778889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|..||...+
T Consensus       175 i~slG~il~~l~~g~~p~~~~~  196 (262)
T cd05572         175 YWSLGILLYELLTGRPPFGEDD  196 (262)
T ss_pred             hhhhHHHHHHHHhCCCCcCCCC
Confidence            9999999999999999997665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.3e-22  Score=125.18  Aligned_cols=94  Identities=23%  Similarity=0.377  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++......      ....++..|++||.+.+..++.++|
T Consensus       105 qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~D  175 (260)
T cd05611         105 EVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN------KKFVGTPDYLAPETILGVGDDKMSD  175 (260)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceecccc------ccCCCCcCccChhhhcCCCCcchhh
Confidence            6889999999   789999999999999999999999999987654321      1224677899999988777889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       176 v~slG~il~~l~~g~~p~~~~~~  198 (260)
T cd05611         176 WWSLGCVIFEFLFGYPPFHAETP  198 (260)
T ss_pred             hHHHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.88  E-value=1.9e-22  Score=123.37  Aligned_cols=92  Identities=29%  Similarity=0.363  Sum_probs=77.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||.+........     ...++..|++||......++.++|
T Consensus        93 ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  164 (237)
T cd05576          93 EMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD-----GEAVENMYCAPEVGGISEETEACD  164 (237)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc-----cCCcCccccCCcccCCCCCCchhh
Confidence            6889999999   89999999999999999999999999998755433211     113455799999988778889999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||+|++++++++|..|+..
T Consensus       165 vwslG~il~el~~g~~~~~~  184 (237)
T cd05576         165 WWSLGAILFELLTGKTLVEC  184 (237)
T ss_pred             HHHHHHHHHHHHHCcchhhc
Confidence            99999999999999987653

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.88  E-value=1e-22  Score=125.77  Aligned_cols=100  Identities=31%  Similarity=0.502  Sum_probs=82.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccC-CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG-DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~-~~~~   78 (110)
                      |++.|+.+||   +.+++|+|++|.||++++++.++++|||++..........  ......++..|++||++... .++.
T Consensus       110 ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~  186 (267)
T cd06610         110 EVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDF  186 (267)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCc
Confidence            6889999999   8999999999999999999999999999987654332221  12223477789999988766 6788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||...+.
T Consensus       187 ~~Dv~slG~i~~~l~~g~~p~~~~~~  212 (267)
T cd06610         187 KADIWSFGITAIELATGAAPYSKYPP  212 (267)
T ss_pred             ccchHhHhHHHHHHHhCCCCccccCh
Confidence            99999999999999999999976543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=3.1e-23  Score=141.32  Aligned_cols=104  Identities=26%  Similarity=0.405  Sum_probs=90.1

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      +||++||.|||   ..+++||||..+|+|+.+...+|+.|||+++...............-.+.|||-|.+....++.++
T Consensus       805 ~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqS  881 (1177)
T KOG1025|consen  805 YQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQS  881 (1177)
T ss_pred             HHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchh
Confidence            48999999999   899999999999999999999999999999987655544443333345679999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcccc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAGDR  107 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~~~  107 (110)
                      |+||||+++||++| |..||.+....++
T Consensus       882 DVWsfGVtiWElmTFGa~Py~gi~~~eI  909 (1177)
T KOG1025|consen  882 DVWSFGVTIWELMTFGAKPYDGIPAEEI  909 (1177)
T ss_pred             hhhhhhhhHHHHHhcCCCccCCCCHHHh
Confidence            99999999999998 9999988866553

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.88  E-value=1.6e-22  Score=124.46  Aligned_cols=98  Identities=23%  Similarity=0.423  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....+++.|.+||.+.+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~D  183 (256)
T cd08221         109 QIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM--AETVVGTPYYMSPELCQGVKYNFKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccccc--ccccCCCccccCHhhcCCCCCCCcch
Confidence            6789999999   789999999999999999999999999998765433321  12235778899999998877888999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       184 v~slG~i~~~l~~g~~~~~~~~~  206 (256)
T cd08221         184 IWALGCVLYELLTLKRTFDATNP  206 (256)
T ss_pred             hHHHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999976554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.88  E-value=2.3e-22  Score=125.40  Aligned_cols=98  Identities=23%  Similarity=0.431  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.++.|||   +.+++|+||+|.||+++.++.++++|||++........ .......++..|++||.+.... ++.++
T Consensus       107 ~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~  182 (286)
T cd07832         107 MLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGV  182 (286)
T ss_pred             HHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchh
Confidence            6889999999   89999999999999999999999999999876543321 1112235777899999886543 57899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..+|.+.+
T Consensus       183 Di~slG~~l~~l~tg~~~~~~~~  205 (286)
T cd07832         183 DLWAVGCIFAELLNGSPLFPGEN  205 (286)
T ss_pred             HHHHHHHHHHHHHcCCcCcCCCC
Confidence            99999999999999988887654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.88  E-value=1.8e-22  Score=125.71  Aligned_cols=96  Identities=24%  Similarity=0.361  Sum_probs=79.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|++|||   +.+++|+||+|+||+++. +.++++|||++..........   ...++..|++||.+.. ..++.++
T Consensus       108 qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  180 (282)
T cd07831         108 QLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT---EYISTRWYRAPECLLTDGYYGPKM  180 (282)
T ss_pred             HHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC---CCCCCcccCChhHhhcCCCCCcch
Confidence            7889999999   899999999999999999 999999999987654322211   1246778999997654 3467889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++|+++|..||.+.+.
T Consensus       181 Di~slGv~l~el~~~~~p~~~~~~  204 (282)
T cd07831         181 DIWAVGCVFFEILSLFPLFPGTNE  204 (282)
T ss_pred             hHHHHHHHHHHHHcCCcCCCCCCH
Confidence            999999999999999999987654

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.88  E-value=2.2e-22  Score=125.51  Aligned_cols=96  Identities=22%  Similarity=0.355  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++.........   ....++..|++||.+....++.++|
T Consensus       115 ~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~D  188 (287)
T cd07838         115 QLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVD  188 (287)
T ss_pred             HHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceeccCCccc---ccccccccccChHHhccCCCCCcch
Confidence            6889999999   889999999999999999999999999998765433211   1113567799999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+.+
T Consensus       189 i~s~G~~l~~l~~~~~~~~~~~  210 (287)
T cd07838         189 MWSVGCIFAELFRRRPLFRGTS  210 (287)
T ss_pred             hhhHHHHHHHHHhCCCcccCCC
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.88  E-value=2.3e-22  Score=128.00  Aligned_cols=98  Identities=20%  Similarity=0.319  Sum_probs=76.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-----ecccccccccccccceecc--C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT--G   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~--~   74 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.+++.||+............     ......++..|++||++..  .
T Consensus       109 qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (327)
T cd08227         109 GVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQ  185 (327)
T ss_pred             HHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccC
Confidence            6889999999   8999999999999999999999999987543322111100     0111235567999999875  3


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      .++.++|+||+|++++++++|..||...
T Consensus       186 ~~~~~~DiwslG~il~el~~g~~pf~~~  213 (327)
T cd08227         186 GYDAKSDIYSVGITACELANGHVPFKDM  213 (327)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            5789999999999999999999999653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.88  E-value=1.6e-22  Score=125.97  Aligned_cols=96  Identities=25%  Similarity=0.451  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........   .....++..|++||.+.+..++.++|
T Consensus       103 ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~D  176 (277)
T cd05577         103 QIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK---IKGRAGTPGYMAPEVLQGEVYDFSVD  176 (277)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc---cccccCCCCcCCHHHhcCCCCCchhh
Confidence            6889999999   89999999999999999999999999998765433111   11224667899999988877889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|+.||....
T Consensus       177 i~slG~il~~l~~g~~p~~~~~  198 (277)
T cd05577         177 WFALGCTLYEMIAGRSPFRQRK  198 (277)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCc
Confidence            9999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=3.2e-22  Score=123.21  Aligned_cols=93  Identities=26%  Similarity=0.361  Sum_probs=76.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-------ceEEecccccccCCCCCcceecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-------VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.|++|||   +.+++|+||||.||+++.++       .++++|||++.......      ...+...|++||.+...
T Consensus       109 ~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         109 QLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE------ERVERIPWIAPECIRNG  179 (259)
T ss_pred             HHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCccccccccc------ccccCCCccChhhhcCC
Confidence            7899999999   89999999999999998777       79999999887543311      11355679999998776


Q ss_pred             --CCCchhhHHHHHHHHHHHHh-CCCCcccCC
Q 043407           75 --DYNEKCDVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        75 --~~~~~~d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                        .++.++|+||+|++++++++ |..||...+
T Consensus       180 ~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~  211 (259)
T cd05037         180 QASLTIAADKWSFGTTLLEICSNGEEPLSTLS  211 (259)
T ss_pred             CCCcchhhHHHHHHHHHHHHHhCCCCCcccCC
Confidence              67889999999999999998 577776553

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.87  E-value=3.7e-24  Score=144.86  Aligned_cols=103  Identities=21%  Similarity=0.359  Sum_probs=85.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC-cceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      .|++||+||-   +++++||||..+|||++++-.||++|||+++...++. ........--+.+|.|||.+..++++.++
T Consensus       739 GIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsAS  815 (996)
T KOG0196|consen  739 GIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSAS  815 (996)
T ss_pred             HHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchh
Confidence            4789999999   8999999999999999999999999999998765443 11111111133579999999999999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcccc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAGDR  107 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~~~  107 (110)
                      |+||+|+++||.++ |..||...+-+|+
T Consensus       816 DVWSyGIVmWEVmSyGERPYWdmSNQdV  843 (996)
T KOG0196|consen  816 DVWSYGIVMWEVMSYGERPYWDMSNQDV  843 (996)
T ss_pred             hccccceEEEEecccCCCcccccchHHH
Confidence            99999999999887 9999987766654

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=3.5e-23  Score=139.34  Aligned_cols=102  Identities=22%  Similarity=0.381  Sum_probs=86.5

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccc-ccccccccceeccCCCCch
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI-GIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~-~~~~~~~pe~~~~~~~~~~   79 (110)
                      +||+.||.||.   .+++||||+..+|+++.+...+||+|||+.+-.......+...... -...|+|||.+....|+.+
T Consensus       219 ~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFSha  295 (1039)
T KOG0199|consen  219 MQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHA  295 (1039)
T ss_pred             HHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcccccccc
Confidence            58999999999   8999999999999999999999999999988776555444322212 2345899999999999999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +|+|+||+.+|||++ |+.||.|-.+.
T Consensus       296 SDvWmyGVTiWEMFtyGEePW~G~~g~  322 (1039)
T KOG0199|consen  296 SDVWMYGVTIWEMFTYGEEPWVGCRGI  322 (1039)
T ss_pred             chhhhhhhhHHhhhccCCCCCCCCCHH
Confidence            999999999999998 88999887653

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.87  E-value=2.2e-22  Score=124.82  Aligned_cols=99  Identities=21%  Similarity=0.390  Sum_probs=78.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccc---ccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI---GIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~---~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++................   .+..|++||.+....++.
T Consensus       114 ~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  190 (269)
T cd05065         114 GIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTS  190 (269)
T ss_pred             HHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccc
Confidence            6789999999   8999999999999999999999999999876543222111111111   134699999998888899


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      ++|+||+|++++|+++ |..||...+
T Consensus       191 ~~DvwslG~~l~e~l~~g~~p~~~~~  216 (269)
T cd05065         191 ASDVWSYGIVMWEVMSYGERPYWDMS  216 (269)
T ss_pred             hhhhhhhHHHHHHHhcCCCCCCCCCC
Confidence            9999999999999886 999986543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.87  E-value=2e-22  Score=128.82  Aligned_cols=97  Identities=22%  Similarity=0.400  Sum_probs=80.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....++..|++||.+.. ..++.++
T Consensus       116 qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  190 (337)
T cd07858         116 QLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF--MTEYVVTRWYRAPELLLNCSEYTTAI  190 (337)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc--ccccccccCccChHHHhcCCCCCCcc
Confidence            7889999999   899999999999999999999999999998765432211  112246778999998764 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||.+.+
T Consensus       191 DiwslG~il~~l~~g~~pf~~~~  213 (337)
T cd07858         191 DVWSVGCIFAELLGRKPLFPGKD  213 (337)
T ss_pred             cHHHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.87  E-value=1.7e-22  Score=128.93  Aligned_cols=100  Identities=20%  Similarity=0.381  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceecc-CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTT-GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~-~~~~~   78 (110)
                      |++.|+.|||   ..+++|+||||+||+++.++.++++|||++..........  ......++..|++||.+.. ..++.
T Consensus       115 qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  191 (334)
T cd07855         115 QLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTT  191 (334)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCccccc
Confidence            7899999999   8999999999999999999999999999986543322111  1112357778999998765 34788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       192 ~~Di~slG~~l~el~~g~~pf~~~~~  217 (334)
T cd07855         192 AIDMWSVGCIFAEMLGRRQLFPGKNY  217 (334)
T ss_pred             ccchHHHHHHHHHHHcCCCccCCCCh
Confidence            89999999999999999999976543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=7.2e-23  Score=137.20  Aligned_cols=98  Identities=26%  Similarity=0.373  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.||.|||   +.+|||||||..||++..+|.++++|||++-....  +..+.....|+|.|||||++.     ..+|
T Consensus       138 q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~qkRDsFIGTPYWMAPEVvmCET~KD~PY  212 (1187)
T KOG0579|consen  138 QVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQKRDSFIGTPYWMAPEVVMCETFKDQPY  212 (1187)
T ss_pred             HHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchh--HHhhhccccCCcccccchheeeccccCCCc
Confidence            5788999999   89999999999999999999999999998643222  222333457999999999874     4578


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||||+.+.||..+.+|.+.-++
T Consensus       213 DykaDiWSlGITLIEMAqiEPPHhelnp  240 (1187)
T KOG0579|consen  213 DYKADIWSLGITLIEMAQIEPPHHELNP  240 (1187)
T ss_pred             hhhhhHHhhhhHHHHHhccCCCccccch
Confidence            9999999999999999999998866544

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.87  E-value=5.5e-22  Score=125.26  Aligned_cols=93  Identities=28%  Similarity=0.404  Sum_probs=78.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.......      ...++..|++||.+.   ...++.
T Consensus       123 ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  193 (307)
T cd06607         123 GALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN------SFVGTPYWMAPEVILAMDEGQYDG  193 (307)
T ss_pred             HHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC------CccCCccccCceeeeccCCCCCCc
Confidence            6889999999   8999999999999999999999999999886543221      124667899999874   345778


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||||+++|++++|..||.+.+
T Consensus       194 ~sDv~s~G~il~el~tg~~p~~~~~  218 (307)
T cd06607         194 KVDVWSLGITCIELAERKPPLFNMN  218 (307)
T ss_pred             ccchHHHHHHHHHHHcCCCCCCCcc
Confidence            9999999999999999999986544

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.87  E-value=2.5e-22  Score=125.99  Aligned_cols=97  Identities=22%  Similarity=0.405  Sum_probs=77.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      |++.|++|||   +.+++|+||+|+||+++. ++.++++|||++..........  ....+++.|++||.+.+. .++.+
T Consensus       110 qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~  184 (294)
T PLN00009        110 QILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF--THEVVTLWYRAPEILLGSRHYSTP  184 (294)
T ss_pred             HHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc--ccCceeecccCHHHHhCCCCCCcH
Confidence            7899999999   889999999999999985 4578999999986543221111  112456789999987653 46789


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|+||+|++++++++|..||...+
T Consensus       185 ~Dv~slG~i~~~l~tg~~pf~~~~  208 (294)
T PLN00009        185 VDIWSVGCIFAEMVNQKPLFPGDS  208 (294)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999997654

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.87  E-value=2e-22  Score=125.88  Aligned_cols=98  Identities=22%  Similarity=0.388  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|+.|||   +.+++|+|++|+||+++.++.++++|||++.........  .....++..|++||.+..     ..+
T Consensus       132 ~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  206 (286)
T cd06638         132 EALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQLDSTY  206 (286)
T ss_pred             HHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCc--cccccCCCcccChhhhchhhhccccc
Confidence            6789999999   789999999999999999999999999998765432211  122357788999998753     346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|+++|++++|..||...+.
T Consensus       207 ~~~~Dv~slGvi~~el~~g~~p~~~~~~  234 (286)
T cd06638         207 DARCDVWSLGITAIELGDGDPPLADLHP  234 (286)
T ss_pred             cchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence            7889999999999999999999875543

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.87  E-value=3.7e-22  Score=124.48  Aligned_cols=97  Identities=21%  Similarity=0.404  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|++|||   +.+++|+|++|.||+++.++.++++|||++..........  ....++..|++||.+.+. .++.++
T Consensus       107 ~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  181 (283)
T cd07835         107 QLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGSRQYSTPV  181 (283)
T ss_pred             HHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc--CccccccCCCCCceeecCcccCcHH
Confidence            6889999999   7899999999999999999999999999986543221111  112356789999987654 468899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|+++|++++|..||...+
T Consensus       182 Di~slG~~l~~l~~g~~pf~~~~  204 (283)
T cd07835         182 DIWSIGCIFAEMVNRRPLFPGDS  204 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=3.5e-22  Score=122.80  Aligned_cols=98  Identities=29%  Similarity=0.470  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||++............ ...++..|++||......++.++|
T Consensus       111 ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~D  186 (258)
T smart00219      111 QIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSD  186 (258)
T ss_pred             HHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchh
Confidence            6889999999   899999999999999999999999999998765443222211 123567899999987778899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||...+
T Consensus       187 i~slG~i~~~l~~~g~~p~~~~~  209 (258)
T smart00219      187 VWSFGVLLWEIFTLGESPYPGMS  209 (258)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999998 788886543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.87  E-value=1.7e-22  Score=136.44  Aligned_cols=94  Identities=22%  Similarity=0.263  Sum_probs=71.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCC-----
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-----   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-----   75 (110)
                      |++.||.|||   +.+++||||||.||+++. ++.++++|||++......... ......+++.|++||.+....     
T Consensus       263 qll~aL~yLH---~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~  338 (566)
T PLN03225        263 QILFALDGLH---STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSA  338 (566)
T ss_pred             HHHHHHHHHH---HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCC
Confidence            6789999999   889999999999999985 578999999998754332211 112235778999999654322     


Q ss_pred             -----------------CCchhhHHHHHHHHHHHHhCCCCc
Q 043407           76 -----------------YNEKCDVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        76 -----------------~~~~~d~~s~g~~~~~~~~g~~p~   99 (110)
                                       ++.++|+||+||+++|++++..++
T Consensus       339 ~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~  379 (566)
T PLN03225        339 PSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS  379 (566)
T ss_pred             ccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC
Confidence                             234569999999999999876554

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=3.9e-22  Score=124.59  Aligned_cols=96  Identities=23%  Similarity=0.482  Sum_probs=77.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD------   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~------   75 (110)
                      |++.|+.|||.  +.+++|+||+|+||+++.++.++++|||++........    ....++..|++||.+....      
T Consensus       110 ~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  183 (286)
T cd06622         110 AVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA----KTNIGCQSYMAPERIKSGGPNQNPT  183 (286)
T ss_pred             HHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc----ccCCCccCccCcchhcCCCCCccCC
Confidence            68899999993  35899999999999999999999999998865432211    1224677899999885433      


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++.++|+||+|++++++++|..||...+
T Consensus       184 ~~~~~DiwslG~il~~l~~g~~pf~~~~  211 (286)
T cd06622         184 YTVQSDVWSLGLSILEMALGRYPYPPET  211 (286)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCcc
Confidence            4678999999999999999999996543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.87  E-value=2.1e-22  Score=141.04  Aligned_cols=99  Identities=21%  Similarity=0.388  Sum_probs=77.0

Q ss_pred             cHHHHHHHHhcCC----CCCeEEcCCCCCceEECCC-----------------CceEEecccccccCCCCCcceeccccc
Q 043407            2 EIANALAYLHVGF----PRPIVFKNIKLSSILFDED-----------------HVAKLFDFSLAESIPDGETHIKDAIPI   60 (110)
Q Consensus         2 qi~~~l~~lh~~~----~~~~~h~dl~~~nil~~~~-----------------~~~~l~dfg~~~~~~~~~~~~~~~~~~   60 (110)
                      ||+.||.|||...    ..+|+|+||||.||+++..                 ..++|+|||++........   .....
T Consensus       126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~v  202 (1021)
T PTZ00266        126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCV  202 (1021)
T ss_pred             HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc---ccccC
Confidence            7899999999321    1459999999999999642                 3489999999876533221   12235


Q ss_pred             ccccccccceeccC--CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           61 GIMGFVATEYVTTG--DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        61 ~~~~~~~pe~~~~~--~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +++.|+|||++...  .++.++|+|||||++|++++|..||...+
T Consensus       203 GTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~  247 (1021)
T PTZ00266        203 GTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN  247 (1021)
T ss_pred             CCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence            88899999998643  47889999999999999999999997554

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.87  E-value=2.7e-22  Score=126.08  Aligned_cols=97  Identities=24%  Similarity=0.453  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.+++|||   +.+++|+|++|.||+++.++.++++|||++..........  ....+++.|++||.+....++.++|
T Consensus       124 ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~D  198 (292)
T cd06657         124 AVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVD  198 (292)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccc--cccccCccccCHHHhcCCCCCchhh
Confidence            6889999999   7899999999999999999999999999876554322111  1224677899999988778889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+..
T Consensus       199 v~slGvil~el~tg~~p~~~~~  220 (292)
T cd06657         199 IWSLGIMVIEMVDGEPPYFNEP  220 (292)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.87  E-value=2.9e-22  Score=126.25  Aligned_cols=100  Identities=20%  Similarity=0.353  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee---------cccccccccccccceec
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK---------DAIPIGIMGFVATEYVT   72 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~~~~pe~~~   72 (110)
                      |+++|+.|||   +.+++|+|++|.||++++++.++++|||++...........         .....+++.|++||.+.
T Consensus       123 ~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (311)
T cd07866         123 QLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL  199 (311)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhh
Confidence            6889999999   88999999999999999999999999998865432211111         01123566799999876


Q ss_pred             cC-CCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           73 TG-DYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        73 ~~-~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +. .++.++|+||+|++++++++|..||.+.+.
T Consensus       200 ~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~  232 (311)
T cd07866         200 GERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD  232 (311)
T ss_pred             CCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence            54 468889999999999999999999976543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.87  E-value=3.6e-22  Score=127.06  Aligned_cols=100  Identities=25%  Similarity=0.383  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      |++.|+++||   +.+++|+||||.||+++.++.++++|||.+......... .......++..|++||.+.+. ..+.+
T Consensus       111 ~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  187 (330)
T cd07834         111 QILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKA  187 (330)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcc
Confidence            6889999999   899999999999999999999999999998765443210 111222467789999999877 78899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|++++++++|..||.+.+.
T Consensus       188 sDi~slG~il~~l~~g~~pf~~~~~  212 (330)
T cd07834         188 IDIWSVGCIFAELLTRKPLFPGRDY  212 (330)
T ss_pred             hhHHHHHHHHHHHHcCCCCcCCCCH
Confidence            9999999999999999999977654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.87  E-value=1.1e-22  Score=126.31  Aligned_cols=100  Identities=23%  Similarity=0.358  Sum_probs=85.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |.+.|+++||   +.+|+||||||.||++..++..|+.|||++..-...   .+..-...++.|.|||++.+..+...+|
T Consensus       126 q~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vd  199 (369)
T KOG0665|consen  126 QMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVD  199 (369)
T ss_pred             HHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccch
Confidence            6788999999   899999999999999999999999999998653322   1112225677899999999988999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      +||.||++.|++.|...|.|.+..|+
T Consensus       200 iwSvGci~gEli~~~Vlf~g~d~idQ  225 (369)
T KOG0665|consen  200 IWSVGCIMGELILGTVLFPGKDHIDQ  225 (369)
T ss_pred             hhhhhhHHHHHhhceEEecCchHHHH
Confidence            99999999999999999998877665

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=4.8e-22  Score=123.36  Aligned_cols=99  Identities=26%  Similarity=0.508  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC--CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~   79 (110)
                      |++.|+.+||   +.+++|+||+|.||+++.++.++++|||++................++..|++||.+....  ++.+
T Consensus       116 qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~  192 (272)
T cd06629         116 QVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAK  192 (272)
T ss_pred             HHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCcc
Confidence            6889999999   7899999999999999999999999999987654322221122234677899999887654  7888


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|+||+|++++++++|..||...+
T Consensus       193 ~Dv~slG~~l~~l~~g~~p~~~~~  216 (272)
T cd06629         193 VDIWSLGCVVLEMFAGRRPWSDEE  216 (272)
T ss_pred             chhHHHHHHHHHHHhCCCCCcCcc
Confidence            999999999999999999996543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.87  E-value=3.5e-22  Score=123.84  Aligned_cols=100  Identities=21%  Similarity=0.357  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceec-ccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+++||   +.+++|+||||.|++++.++.++++|||.+............ .....+..|++||.+....++.++
T Consensus       114 ~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~  190 (267)
T cd05066         114 GIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS  190 (267)
T ss_pred             HHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchh
Confidence            6789999999   899999999999999999999999999998765432221111 111224569999999888889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|++++++++ |..||...+.
T Consensus       191 Dv~slG~~l~ell~~g~~p~~~~~~  215 (267)
T cd05066         191 DVWSYGIVMWEVMSYGERPYWEMSN  215 (267)
T ss_pred             hhHHHHHHHHHHhcCCCCCcccCCH
Confidence            99999999999886 9999976543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.87  E-value=4.8e-22  Score=125.66  Aligned_cols=99  Identities=22%  Similarity=0.355  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-----eecccccccccccccceeccC--
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG--   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~--   74 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++||+.+.........     .......++..|++||.+...  
T Consensus       109 ~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (314)
T cd08216         109 DVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQ  185 (314)
T ss_pred             HHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCC
Confidence            6889999999   899999999999999999999999999987644321111     011122356679999988653  


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++.++|+||+|++++++++|..||....
T Consensus       186 ~~~~~~Diws~G~il~el~~g~~pf~~~~  214 (314)
T cd08216         186 GYNEKSDIYSVGITACELANGHVPFKDMP  214 (314)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence            47788999999999999999999997543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.87  E-value=3.8e-22  Score=125.28  Aligned_cols=98  Identities=26%  Similarity=0.350  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |+++|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+.+ ..++.++
T Consensus       110 qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  184 (298)
T cd07841         110 MTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM--THQVVTRWYRAPELLFGARHYGVGV  184 (298)
T ss_pred             HHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc--cccccceeeeCHHHHhCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999987654332211  11235667999998754 3467899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..+|.+.+.
T Consensus       185 Dv~slG~il~e~~~g~~~~~~~~~  208 (298)
T cd07841         185 DMWSVGCIFAELLLRVPFLPGDSD  208 (298)
T ss_pred             HHHHHHHHHHHHHcCCccccCCcc
Confidence            999999999999999888866543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.2e-22  Score=124.44  Aligned_cols=98  Identities=30%  Similarity=0.498  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.++.|||   +.+++|+||+|+||+++.++.++++|||++.........  .....++..|++||.+... .++.++
T Consensus       109 ~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (277)
T cd06917         109 EVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK--RSTFVGTPYWMAPEVITEGKYYDTKA  183 (277)
T ss_pred             HHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc--cccccCCcceeCHHHhccCCccccch
Confidence            6889999999   899999999999999999999999999988765433211  1223577789999987653 467899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|+++|++++|..||.+.+.
T Consensus       184 Dv~slG~~l~~ll~g~~p~~~~~~  207 (277)
T cd06917         184 DIWSLGITIYEMATGNPPYSDVDA  207 (277)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999976654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.87  E-value=3.6e-22  Score=123.02  Aligned_cols=94  Identities=28%  Similarity=0.488  Sum_probs=79.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   ..+++|+||+|.||+++.++.++++|||.+........     ....+..|++||.+....++.++|
T Consensus       110 qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~D  181 (256)
T cd05039         110 DVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHH
Confidence            6889999999   89999999999999999999999999999876533222     112345699999988888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|++++++++ |..||...+
T Consensus       182 i~slG~il~~l~~~g~~p~~~~~  204 (256)
T cd05039         182 VWSFGILLWEIYSFGRVPYPRIP  204 (256)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCC
Confidence            9999999999997 999986654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.87  E-value=3.2e-22  Score=123.25  Aligned_cols=99  Identities=27%  Similarity=0.403  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc------ceecccccccccccccceeccCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------HIKDAIPIGIMGFVATEYVTTGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~~~~   75 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........      ........+...|++||......
T Consensus       101 qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  177 (265)
T cd05579         101 EIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG  177 (265)
T ss_pred             HHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCC
Confidence            6889999999   89999999999999999999999999998765433211      01112234667899999988877


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .+.++|+||+|++++++++|..||...+
T Consensus       178 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~  205 (265)
T cd05579         178 HSKTVDWWSLGCILYEFLVGIPPFHGET  205 (265)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            8889999999999999999999997554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.87  E-value=5.8e-22  Score=122.84  Aligned_cols=97  Identities=29%  Similarity=0.462  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|||.  ..+++|+||+|.||+++.++.++++|||.+.......   ......++..|++||.+....++.++|
T Consensus       121 ~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D  195 (269)
T cd08528         121 QMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKAD  195 (269)
T ss_pred             HHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHH
Confidence            68899999993  2679999999999999999999999999987654332   112235777899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|..||...+
T Consensus       196 v~slG~ll~~l~~g~~p~~~~~  217 (269)
T cd08528         196 VWAFGCILYQMCTLQPPFYSTN  217 (269)
T ss_pred             HHHHHHHHHHHHhCCCcccccC
Confidence            9999999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.87  E-value=5.5e-22  Score=123.48  Aligned_cols=98  Identities=23%  Similarity=0.376  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||.+........  ......++..|++||.+... ..+.++
T Consensus       106 ~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~  180 (283)
T cd05118         106 QLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPV  180 (283)
T ss_pred             HHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchh
Confidence            6889999999   89999999999999999999999999998866544321  11122466779999998766 678999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|+.||...+.
T Consensus       181 Di~slG~~l~~l~tg~~~~~~~~~  204 (283)
T cd05118         181 DIWSVGCIFAELLSRRPLFPGKSE  204 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976553

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.87  E-value=6.6e-22  Score=122.59  Aligned_cols=96  Identities=25%  Similarity=0.453  Sum_probs=77.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCC--CCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~   78 (110)
                      |++.|+.|||   ..+++|+|++|.||+++. ++.++++|||++..........  ....++..|++||.+....  ++.
T Consensus       116 qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~  190 (268)
T cd06624         116 QILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEVIDKGPRGYGA  190 (268)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc--ccCCCCccccChhhhccccccCCc
Confidence            6889999999   899999999999999976 6789999999886543222111  1224677899999886543  678


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++|+||+|++++++++|..||...
T Consensus       191 ~~Dv~slGvvl~~l~~g~~p~~~~  214 (268)
T cd06624         191 PADIWSLGCTIVEMATGKPPFIEL  214 (268)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCccc
Confidence            999999999999999999998643

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.87  E-value=7.9e-22  Score=121.53  Aligned_cols=100  Identities=23%  Similarity=0.362  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCC--CCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGF--PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~--~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|+.+||..+  +.+++|+||+|.||+++.++.++++|||++...........  ...++..|++||.+.....+.+
T Consensus       113 ~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~pE~~~~~~~~~~  190 (265)
T cd08217         113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK--TYVGTPYYMSPEQLNHMSYDEK  190 (265)
T ss_pred             HHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCccccc--ccccCCCccChhhhcCCCCCch
Confidence            6889999999432  57899999999999999999999999999876654332111  2247778999999988888899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|+||+|++++++++|..||...+
T Consensus       191 ~Dv~slG~il~~l~~g~~p~~~~~  214 (265)
T cd08217         191 SDIWSLGCLIYELCALSPPFTARN  214 (265)
T ss_pred             hHHHHHHHHHHHHHHCCCcccCcC
Confidence            999999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.87  E-value=4.5e-22  Score=123.10  Aligned_cols=99  Identities=23%  Similarity=0.353  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC----cceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|++|||   +.+++|+||+|.||++++++.++++|||++.......    .........++..|++||.+....++
T Consensus       110 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  186 (265)
T cd06631         110 QILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYG  186 (265)
T ss_pred             HHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCc
Confidence            6889999999   7899999999999999999999999999876542211    11111122467789999999888888


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++|+||+|++++++++|..||...+
T Consensus       187 ~~~Dv~slG~~~~~l~~g~~p~~~~~  212 (265)
T cd06631         187 RKSDIWSIGCTVFEMATGKPPLASMD  212 (265)
T ss_pred             chhhHHHHHHHHHHHHhCCCccccCC
Confidence            99999999999999999999997544

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.87  E-value=4.6e-22  Score=124.16  Aligned_cols=97  Identities=25%  Similarity=0.446  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+|++|.||++++++.++++|||++..........  ....++..|++||++.+. .++.++
T Consensus       108 ~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  182 (286)
T cd07846         108 QILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--TDYVATRWYRAPELLVGDTKYGRAV  182 (286)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc--CcccceeeccCcHHhccccccCchH
Confidence            6889999999   7899999999999999999999999999987543322211  122467789999988653 367889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||....
T Consensus       183 Dv~slG~~l~el~~g~~~~~~~~  205 (286)
T cd07846         183 DIWAVGCLVTEMLTGEPLFPGDS  205 (286)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCc
Confidence            99999999999999999997554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.87  E-value=7.1e-22  Score=123.71  Aligned_cols=97  Identities=33%  Similarity=0.546  Sum_probs=78.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC--CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG--DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~   79 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++......... ......++..|++||.+...  ..+.+
T Consensus       113 qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (290)
T cd05613         113 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKA  188 (290)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceeccccccc-ccccccCCcccCChhhccCCCCCCCcc
Confidence            7899999999   899999999999999999999999999988654332111 11223477789999988653  35678


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +|+||+|++++++++|..||...
T Consensus       189 ~Dv~slG~~l~~ll~g~~p~~~~  211 (290)
T cd05613         189 VDWWSMGVLMYELLTGASPFTVD  211 (290)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCcC
Confidence            99999999999999999998643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=3.8e-22  Score=124.67  Aligned_cols=95  Identities=25%  Similarity=0.348  Sum_probs=77.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +++++|+||||+||+++.++.++++|||++.......... ......++..|++||.+....++.++
T Consensus       117 ~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~  193 (284)
T cd05079         117 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIAS  193 (284)
T ss_pred             HHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccc
Confidence            6889999999   8999999999999999999999999999987654322211 11122455679999998888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~   99 (110)
                      |+||+|+++++++++..|.
T Consensus       194 Di~slG~il~ellt~~~~~  212 (284)
T cd05079         194 DVWSFGVTLYELLTYCDSE  212 (284)
T ss_pred             cchhhhhhhhhhhcCCCCC
Confidence            9999999999999976543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=7e-22  Score=123.35  Aligned_cols=95  Identities=25%  Similarity=0.396  Sum_probs=76.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceec-ccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++............ ....+...|++||......++.++
T Consensus       116 ~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  192 (284)
T cd05081         116 QICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVAS  192 (284)
T ss_pred             HHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHH
Confidence            6889999999   899999999999999999999999999998766443222111 111233458999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~   99 (110)
                      |+||+|++++|++++..++
T Consensus       193 Di~slG~~l~el~~~~~~~  211 (284)
T cd05081         193 DVWSFGVVLYELFTYSDKS  211 (284)
T ss_pred             HHHHHHHHHHHHhhcCCcC
Confidence            9999999999999976654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.87  E-value=4.6e-22  Score=122.47  Aligned_cols=98  Identities=22%  Similarity=0.433  Sum_probs=79.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++++||   +.+++|+|++|.||+++.++.++++|||.+.......... ......+..|++||......++.++|
T Consensus       108 ~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~-~~~~~~~~~~~aPe~~~~~~~~~~~D  183 (256)
T cd05112         108 DVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS-STGTKFPVKWSSPEVFSFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccc-cCCCccchhhcCHhHhccCCcChHHH
Confidence            6788999999   8899999999999999999999999999876543322111 11112445799999998888889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||+|+++||+++ |..||...+
T Consensus       184 v~slG~~l~el~~~g~~p~~~~~  206 (256)
T cd05112         184 VWSFGVLMWEVFSEGKTPYENRS  206 (256)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCC
Confidence            9999999999998 899987554

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.87  E-value=2.5e-22  Score=124.07  Aligned_cols=94  Identities=29%  Similarity=0.526  Sum_probs=80.0

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|+|   + .+++|+||+|+||+++.++.++++|||.+..........    ..++..|++||.+.+..++.++
T Consensus       108 ~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~----~~~~~~y~~PE~~~~~~~~~~~  180 (265)
T cd06605         108 AVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT----FVGTSSYMAPERIQGNDYSVKS  180 (265)
T ss_pred             HHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc----ccCChhccCHHHHcCCCCCchh
Confidence            6789999999   7 899999999999999999999999999876543211111    3567789999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|..||...
T Consensus       181 Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         181 DIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             hHHHHHHHHHHHHhCCCCCCcc
Confidence            9999999999999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.87  E-value=5.2e-22  Score=123.80  Aligned_cols=98  Identities=18%  Similarity=0.363  Sum_probs=79.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+|++|.||++++++.++++|||.+.........  .....++..|++||.+.+. .++.++
T Consensus       108 qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~  182 (284)
T cd07836         108 QLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNT--FSNEVVTLWYRAPDVLLGSRTYSTSI  182 (284)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccc--cccccccccccChHHhcCCCCCCcHH
Confidence            6889999999   789999999999999999999999999988654322111  1112456779999987654 467899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+|++|++++++++|..||.+.+.
T Consensus       183 Dv~slG~~l~~l~~g~~~~~~~~~  206 (284)
T cd07836         183 DIWSVGCIMAEMITGRPLFPGTNN  206 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCc
Confidence            999999999999999999987654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4.7e-22  Score=123.93  Aligned_cols=97  Identities=25%  Similarity=0.367  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.|+.|||   +.+++|+|++|.||+++.++.++++|||++.........  .....++..|++||.+.     ...+
T Consensus       111 ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~  185 (280)
T cd06611         111 QMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK--RDTFIGTPYWMAPEVVACETFKDNPY  185 (280)
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc--cceeecchhhcCHHHHhhcccCCCCC
Confidence            6889999999   899999999999999999999999999987544322211  12235777899999874     2346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|+++|++++|..||...+
T Consensus       186 ~~~sDi~slG~il~~l~~g~~p~~~~~  212 (280)
T cd06611         186 DYKADIWSLGITLIELAQMEPPHHELN  212 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCCcccCC
Confidence            778999999999999999999997654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.87  E-value=1.7e-22  Score=121.98  Aligned_cols=101  Identities=22%  Similarity=0.289  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc-------ceecccccccccccccceecc-
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET-------HIKDAIPIGIMGFVATEYVTT-   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~~~~pe~~~~-   73 (110)
                      +++.|+++||.. ..++.||||||.||++.+++.+.+.|||-+...+-.-.       ...-.....+..|.|||.+.- 
T Consensus       135 gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk  213 (302)
T KOG2345|consen  135 GICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK  213 (302)
T ss_pred             HHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc
Confidence            678999999943 12499999999999999999999999998765432111       111122357788999999853 


Q ss_pred             --CCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           74 --GDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        74 --~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                        ...+.++|+||+||++|+++-|..||...-
T Consensus       214 ~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~  245 (302)
T KOG2345|consen  214 SHCTITERTDIWSLGCTLYAMMFGESPFERIY  245 (302)
T ss_pred             cCcccccccchhhhhHHHHHHHHcCCcchHHh
Confidence              446799999999999999999999997553

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4e-22  Score=123.50  Aligned_cols=97  Identities=26%  Similarity=0.427  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-----CCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-----~~~   76 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++.........  .....++..|++||.+..     ..+
T Consensus       121 ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  195 (275)
T cd06608         121 ETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGR--RNTFIGTPYWMAPEVIACDEQPDASY  195 (275)
T ss_pred             HHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceecccchhh--hcCccccccccCHhHhcccccccCCc
Confidence            6889999999   899999999999999999999999999987654332211  122357778999998753     235


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|++++++++|..||...+
T Consensus       196 ~~~~Dv~slG~il~~l~~g~~p~~~~~  222 (275)
T cd06608         196 DARSDVWSLGITAIELADGKPPLCDMH  222 (275)
T ss_pred             cccccHHHhHHHHHHHHhCCCCccccc
Confidence            678999999999999999999997543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.87  E-value=6.6e-22  Score=124.29  Aligned_cols=95  Identities=32%  Similarity=0.532  Sum_probs=77.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC----CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~   77 (110)
                      |++.|++|||.  ..+++|+||+|.||+++.++.++++|||++.........   ....++..|++||.+....    ++
T Consensus       122 ~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  196 (296)
T cd06618         122 AIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK---TRSAGCAAYMAPERIDPPDPNPKYD  196 (296)
T ss_pred             HHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc---cCCCCCccccCHhhcCCCCCccccc
Confidence            68899999993  258999999999999999999999999998655332211   1124667899999986553    67


Q ss_pred             chhhHHHHHHHHHHHHhCCCCccc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .++|+||+|++++++++|..||..
T Consensus       197 ~~~Di~slG~il~el~~g~~p~~~  220 (296)
T cd06618         197 IRADVWSLGISLVELATGQFPYKN  220 (296)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCc
Confidence            889999999999999999999965

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.87  E-value=6.8e-22  Score=126.66  Aligned_cols=94  Identities=24%  Similarity=0.441  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........     ...+++.|++||.+.. ..++.++
T Consensus       126 qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07880         126 QMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMT-----GYVVTRWYRAPEVILNWMHYTQTV  197 (343)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccccCcc-----ccccCCcccCHHHHhCCCCCCcHH
Confidence            7889999999   89999999999999999999999999999875433221     1245678999998865 3478899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       198 Di~slG~ll~~l~~g~~pf~~~~  220 (343)
T cd07880         198 DIWSVGCIMAEMLTGKPLFKGHD  220 (343)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.86  E-value=9.1e-22  Score=122.63  Aligned_cols=99  Identities=26%  Similarity=0.433  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+++||   ..+++|+||+|.||+++.++.++++|||++......... ......++..|++||.+.+ ..++.++
T Consensus       108 ~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~  183 (287)
T cd07840         108 QLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-DYTNRVITLWYRPPELLLGATRYGPEV  183 (287)
T ss_pred             HHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-cccccccccccCCceeeEccccCChHH
Confidence            6889999999   789999999999999999999999999998765433211 1111245667999998765 3578899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||...+.
T Consensus       184 Dv~slG~~l~el~t~~~p~~~~~~  207 (287)
T cd07840         184 DMWSVGCILAELFLGKPIFQGSTE  207 (287)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999976553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.86  E-value=9e-22  Score=120.29  Aligned_cols=95  Identities=31%  Similarity=0.524  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.+||   ..+++|+|++|.||+++.++.++++|||.+........   .....++..|++||.+.....+.++|
T Consensus       106 ~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~D  179 (253)
T cd05122         106 ELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKAD  179 (253)
T ss_pred             HHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCcccc
Confidence            6889999999   89999999999999999999999999998876544321   12225677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||+|++++++++|..||...
T Consensus       180 v~slG~il~~l~~g~~p~~~~  200 (253)
T cd05122         180 IWSLGITAIELAEGKPPYSEL  200 (253)
T ss_pred             HHHHHHHHHHHHhCCCCCCCC
Confidence            999999999999999999765

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.86  E-value=7.6e-22  Score=121.71  Aligned_cols=97  Identities=24%  Similarity=0.439  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.++.|||   + .+++|+|++|+||+++.++.++++|||++..........  ....++..|++||.+....++.++
T Consensus       107 ~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~  181 (264)
T cd06623         107 QILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAA  181 (264)
T ss_pred             HHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc--cceeecccccCHhhhCCCCCCchh
Confidence            6889999999   8 999999999999999999999999999887654322221  122466789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||||++++++++|..||...+
T Consensus       182 Dv~slG~il~~l~tg~~p~~~~~  204 (264)
T cd06623         182 DIWSLGLTLLECALGKFPFLPPG  204 (264)
T ss_pred             hHHHHHHHHHHHHhCCCCCcccc
Confidence            99999999999999999997664

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.86  E-value=6.3e-22  Score=123.37  Aligned_cols=94  Identities=30%  Similarity=0.564  Sum_probs=77.1

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc----CCC
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT----GDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----~~~   76 (110)
                      |++.|+.|||   ++ +++|+||+|.||+++.++.++++|||++........   .....++..|++||.+..    ..+
T Consensus       111 qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~  184 (283)
T cd06617         111 SIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA---KTIDAGCKPYMAPERINPELNQKGY  184 (283)
T ss_pred             HHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc---cccccCCccccChhhcCCccccccc
Confidence            7889999999   66 899999999999999999999999999875432211   111246778999998864    345


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCccc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +.++|+||+|++++++++|+.||..
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         185 DVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             CccccchhhHHHHHHHHhCCCCCCc
Confidence            7889999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.86  E-value=4.3e-22  Score=122.49  Aligned_cols=96  Identities=31%  Similarity=0.425  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.|++|||   +.+++|+||+|+||+++.++.++++|||++.......   ......++..|++||.+.... ++.++
T Consensus       110 ~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~  183 (258)
T cd06632         110 QILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAA  183 (258)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchh
Confidence            6889999999   8899999999999999999999999999876543322   112234677899999887666 78899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||....
T Consensus       184 D~~slG~~l~~l~~g~~pf~~~~  206 (258)
T cd06632         184 DIWSLGCTVLEMATGKPPWSQLE  206 (258)
T ss_pred             hhHHHHHHHHHHHhCCCCcccCc
Confidence            99999999999999999996554

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.86  E-value=1.2e-21  Score=121.85  Aligned_cols=97  Identities=27%  Similarity=0.450  Sum_probs=80.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.+||   +.+++|+|++|+||+++.++.++++|||++..........  .....+..|++||.+... .++.++
T Consensus       106 ~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  180 (282)
T cd07829         106 QLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY--THEVVTLWYRAPEILLGSKHYSTAV  180 (282)
T ss_pred             HHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc--CccccCcCcCChHHhcCCcCCCccc
Confidence            6889999999   7899999999999999999999999999887654322111  112345679999988766 678899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       181 Dv~slG~~l~~l~~~~~~~~~~~  203 (282)
T cd07829         181 DIWSVGCIFAEMITGKPLFPGDS  203 (282)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCcc
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.86  E-value=4.9e-22  Score=122.34  Aligned_cols=97  Identities=26%  Similarity=0.405  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....+++.|++||.......+.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~D  183 (256)
T cd08218         109 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA--RTCIGTPYYLSPEICENRPYNNKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh--hhccCCccccCHHHhCCCCCCCccc
Confidence            6889999999   8999999999999999999999999999886554322111  1224677899999998888888999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       184 v~slG~i~~~l~~g~~~~~~~~  205 (256)
T cd08218         184 IWALGCVLYEMCTLKHAFEAGN  205 (256)
T ss_pred             hhHHHHHHHHHHcCCCCccCCC
Confidence            9999999999999999986554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.86  E-value=9.3e-22  Score=122.98  Aligned_cols=97  Identities=27%  Similarity=0.532  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+|++|.||+++.++.++++|||++.........  .....++..|++||.+....++.++|
T Consensus       124 ~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~D  198 (286)
T cd06614         124 EVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK--RNSVVGTPYWMAPEVIKRKDYGPKVD  198 (286)
T ss_pred             HHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh--hccccCCcccCCHhHhcCCCCCCccc
Confidence            6889999999   899999999999999999999999999987654332211  11224667899999988888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       199 v~slGvil~~l~~g~~p~~~~~  220 (286)
T cd06614         199 IWSLGIMCIEMAEGEPPYLREP  220 (286)
T ss_pred             cHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1e-22  Score=135.35  Aligned_cols=93  Identities=28%  Similarity=0.411  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc---CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~   78 (110)
                      +.+.||+|||   +.+.||||||..||+++.++.+|++|||-+..+....      ...|||.|||||++..   +.|+-
T Consensus       134 gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn------sFvGTPywMAPEVILAMDEGqYdg  204 (948)
T KOG0577|consen  134 GALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDG  204 (948)
T ss_pred             HHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCchh------cccCCccccchhHheeccccccCC
Confidence            4578999999   8999999999999999999999999999886654332      2379999999999864   55889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|+...|+..+++|+=..+
T Consensus       205 kvDvWSLGITCIELAERkPPlFnMN  229 (948)
T KOG0577|consen  205 KVDVWSLGITCIELAERKPPLFNMN  229 (948)
T ss_pred             ccceeeccchhhhhhhcCCCccCch
Confidence            9999999999999999998864443

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=1.1e-21  Score=121.14  Aligned_cols=93  Identities=23%  Similarity=0.334  Sum_probs=74.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc--------eEEecccccccCCCCCcceecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~--------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.|++|||   +.+++||||||.||+++.++.        ++++|||++.......      ...++..|++||.+..
T Consensus       108 qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~  178 (258)
T cd05078         108 QLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE------ILLERIPWVPPECIEN  178 (258)
T ss_pred             HHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCch------hccccCCccCchhccC
Confidence            7889999999   899999999999999977654        5899999875443211      1246678999999876


Q ss_pred             C-CCCchhhHHHHHHHHHHHHhC-CCCcccCC
Q 043407           74 G-DYNEKCDVFSFGVLLLVLLTG-QKLYSIDE  103 (110)
Q Consensus        74 ~-~~~~~~d~~s~g~~~~~~~~g-~~p~~~~~  103 (110)
                      . .++.++|+||+|+++|++++| ..|+...+
T Consensus       179 ~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~  210 (258)
T cd05078         179 PQNLSLAADKWSFGTTLWEIFSGGDKPLSALD  210 (258)
T ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCCChhhcc
Confidence            4 468889999999999999998 46665543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.86  E-value=1.5e-21  Score=123.88  Aligned_cols=93  Identities=28%  Similarity=0.401  Sum_probs=77.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.......      ...++..|++||.+.   ...++.
T Consensus       133 ~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  203 (317)
T cd06635         133 GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN------SFVGTPYWMAPEVILAMDEGQYDG  203 (317)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc------cccCCccccChhhhhcCCCCCCCc
Confidence            6789999999   8999999999999999999999999999876443221      124677899999874   345788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||...+
T Consensus       204 ~~Dv~slGvil~el~~g~~p~~~~~  228 (317)
T cd06635         204 KVDVWSLGITCIELAERKPPLFNMN  228 (317)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.86  E-value=9.1e-22  Score=126.06  Aligned_cols=95  Identities=31%  Similarity=0.490  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........     ...++..|++||.+.. ..++.++
T Consensus       126 ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07851         126 QILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMT-----GYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccccccccccccc-----CCcccccccCHHHHhCCCCCCchH
Confidence            7889999999   89999999999999999999999999999875533211     1246677999998754 3567899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|+.||.+.+.
T Consensus       198 DvwslGv~l~elltg~~pf~~~~~  221 (343)
T cd07851         198 DIWSVGCIMAELLTGKTLFPGSDH  221 (343)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999976543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.86  E-value=1.4e-21  Score=120.59  Aligned_cols=98  Identities=31%  Similarity=0.508  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceec--ccccccccccccceeccCC---C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD--AIPIGIMGFVATEYVTTGD---Y   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~---~   76 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++............  ....++..|++||.+....   .
T Consensus       107 ~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  183 (264)
T cd06626         107 QLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGH  183 (264)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCC
Confidence            6889999999   899999999999999999999999999998765433222111  1124667899999987665   7


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +.++|+||+|++++++++|..||...
T Consensus       184 ~~~~Dv~s~G~il~~l~~g~~pf~~~  209 (264)
T cd06626         184 GRAADIWSLGCVVLEMATGKRPWSEL  209 (264)
T ss_pred             CcccchHHHHHHHHHHHhCCCCccCC
Confidence            88899999999999999999999654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.86  E-value=1.2e-21  Score=114.93  Aligned_cols=84  Identities=26%  Similarity=0.280  Sum_probs=71.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+      ||.||+++.++.+++  ||++.......       ..+++.|+|||++.+..++.++|
T Consensus        25 qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~D   86 (176)
T smart00750       25 QCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKAD   86 (176)
T ss_pred             HHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhh
Confidence            7899999999   554      999999999999998  99876543321       14778999999999989999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++||+++|+.||....
T Consensus        87 iwSlG~il~elltg~~p~~~~~  108 (176)
T smart00750       87 IYSLGITLYEALDYELPYNEER  108 (176)
T ss_pred             HHHHHHHHHHHHhCCCCccccc
Confidence            9999999999999999996543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.86  E-value=1.6e-21  Score=124.39  Aligned_cols=94  Identities=27%  Similarity=0.429  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |+++|+.|||   +.+++|+|++|.|++++.++.++++|||.+.......     ....++..|++||.+.. ..++.++
T Consensus       116 ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  187 (328)
T cd07856         116 QILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEV  187 (328)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHH
Confidence            6889999999   8999999999999999999999999999876443211     11245677999998765 4578999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       188 Dv~slG~il~el~tg~~~f~~~~  210 (328)
T cd07856         188 DIWSAGCIFAEMLEGKPLFPGKD  210 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.86  E-value=1.4e-21  Score=122.86  Aligned_cols=98  Identities=24%  Similarity=0.394  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||++......... ......++..|++||.+... ..+.++
T Consensus       124 qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~  199 (302)
T cd07864         124 QLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAI  199 (302)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchh
Confidence            6889999999   899999999999999999999999999998765432211 11111345679999987653 467889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|+.||...+
T Consensus       200 Di~slG~~~~el~~g~~~~~~~~  222 (302)
T cd07864         200 DVWSCGCILGELFTKKPIFQANQ  222 (302)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999997543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.86  E-value=8.6e-22  Score=121.44  Aligned_cols=97  Identities=30%  Similarity=0.481  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+++|+.|||   +.+++|+||+|.||+++.++.++++|||++........   .....++..|++||.+.....+.++|
T Consensus       108 ~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~D  181 (258)
T cd05578         108 EIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL---TTSTSGTPGYMAPEVLCRQGYSVAVD  181 (258)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc---ccccCCChhhcCHHHHcccCCCCccc
Confidence            6889999999   88999999999999999999999999998765543221   11234677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       182 i~slG~~l~~l~~g~~p~~~~~~  204 (258)
T cd05578         182 WWSLGVTAYECLRGKRPYRGHSR  204 (258)
T ss_pred             chhhHHHHHHHHhCCCCCCCCCc
Confidence            99999999999999999987653

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.86  E-value=1.3e-21  Score=121.12  Aligned_cols=99  Identities=23%  Similarity=0.491  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcce--ecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++ .++++|||.+..........  ......++..|++||.+....++.
T Consensus       111 ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  187 (268)
T cd06630         111 QLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGR  187 (268)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCc
Confidence            7899999999   89999999999999998765 58999999986654321111  111224677899999988778889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||...+
T Consensus       188 ~~Dv~slG~~l~~l~~g~~p~~~~~  212 (268)
T cd06630         188 SCDVWSVGCVIIEMATAKPPWNAEK  212 (268)
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999996544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=8.5e-22  Score=123.10  Aligned_cols=97  Identities=25%  Similarity=0.449  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|||.  ..+++|+|++|.||+++.++.++++|||++........    ....++..|++||.+....++.++|
T Consensus       111 ~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~D  184 (284)
T cd06620         111 AVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA----DTFVGTSTYMSPERIQGGKYTVKSD  184 (284)
T ss_pred             HHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc----CccccCcccCCHHHHccCCCCccch
Confidence            67889999993  25899999999999999999999999998764422211    1235778899999988888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.....
T Consensus       185 i~slG~~l~~l~tg~~p~~~~~~  207 (284)
T cd06620         185 VWSLGISIIELALGKFPFAFSNI  207 (284)
T ss_pred             HHHHHHHHHHHHhCCCCCcccch
Confidence            99999999999999999976543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.86  E-value=1.4e-21  Score=122.28  Aligned_cols=97  Identities=33%  Similarity=0.509  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC--CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~   79 (110)
                      |++.++.|||   +.+++|+|++|.||+++.++.++++|||++.......... .....++..|++||...+..  .+.+
T Consensus       113 ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (288)
T cd05583         113 EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEER-AYSFCGTIEYMAPEVIRGGSGGHDKA  188 (288)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccccccccc-cccccCCccccCHHHhcCCCCCCcch
Confidence            7889999999   8999999999999999999999999999876544322211 11224677899999886654  6788


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +|+||+|++++++++|..||...
T Consensus       189 ~Dv~slG~il~el~tg~~p~~~~  211 (288)
T cd05583         189 VDWWSLGVLTFELLTGASPFTVD  211 (288)
T ss_pred             hhhHHHHHHHHHHHhCCCCcccC
Confidence            99999999999999999999643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.86  E-value=2.1e-21  Score=123.06  Aligned_cols=94  Identities=29%  Similarity=0.409  Sum_probs=78.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.++.|||   +.+++|+|++|.||+++.++.++++|||++.......      ...++..|++||.+.   ...++.
T Consensus       129 qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  199 (313)
T cd06633         129 GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPAN------SFVGTPYWMAPEVILAMDEGQYDG  199 (313)
T ss_pred             HHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCC------CccccccccChhhccccCCCCCCc
Confidence            6889999999   7899999999999999999999999999875432211      224677899999874   345788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||...+.
T Consensus       200 ~sDv~slGvil~el~~g~~p~~~~~~  225 (313)
T cd06633         200 KVDVWSLGITCIELAERKPPLFNMNA  225 (313)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence            89999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.86  E-value=1.6e-21  Score=121.56  Aligned_cols=94  Identities=24%  Similarity=0.335  Sum_probs=74.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-------ceEEecccccccCCCCCcceecccccccccccccceecc-
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-------VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-   73 (110)
                      |++.|++|||   +.+++||||||.||+++..+       .++++|||++........      ..++..|++||.+.. 
T Consensus       125 qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~------~~~~~~~~aPe~~~~~  195 (274)
T cd05076         125 QLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREE------RVERIPWIAPECVPGG  195 (274)
T ss_pred             HHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccc------cccCCcccCchhhcCC
Confidence            7899999999   89999999999999997543       379999998754322211      135667999998865 


Q ss_pred             CCCCchhhHHHHHHHHHHHH-hCCCCcccCCc
Q 043407           74 GDYNEKCDVFSFGVLLLVLL-TGQKLYSIDEA  104 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~-~g~~p~~~~~~  104 (110)
                      ..++.++|+||||+++||++ +|..||...++
T Consensus       196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~  227 (274)
T cd05076         196 NSLSTAADKWSFGTTLLEICFDGEVPLKERTP  227 (274)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence            45789999999999999985 68999876544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.86  E-value=1.6e-21  Score=119.83  Aligned_cols=96  Identities=22%  Similarity=0.371  Sum_probs=82.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+++||   +.+++|+|++|.||+++.++.++++|||++........    ....++..|++||.+....++.++|
T Consensus       111 ~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~----~~~~~~~~~~~Pe~~~~~~~~~~~D  183 (256)
T cd08530         111 QLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA----KTQIGTPHYMAPEVWKGRPYSYKSD  183 (256)
T ss_pred             HHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc----ccccCCccccCHHHHCCCCCCchhh
Confidence            6889999999   89999999999999999999999999999876544311    1224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|+.||...+.
T Consensus       184 ~~slG~~~~~l~~g~~p~~~~~~  206 (256)
T cd08530         184 IWSLGCLLYEMATFAPPFEARSM  206 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=8e-22  Score=122.80  Aligned_cols=98  Identities=23%  Similarity=0.393  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||.+.......... ......++..|++||......++.++
T Consensus       117 ~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  193 (284)
T cd05038         117 QICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSAS  193 (284)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCccc
Confidence            6889999999   8999999999999999999999999999987665322211 11112344568999998888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++|+++|..|+...
T Consensus       194 Di~slG~~l~el~tg~~p~~~~  215 (284)
T cd05038         194 DVWSFGVTLYELFTYGDPSQSP  215 (284)
T ss_pred             chHHHhhhhheeeccCCCcccc
Confidence            9999999999999999888654

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.86  E-value=8.6e-22  Score=138.00  Aligned_cols=90  Identities=31%  Similarity=0.561  Sum_probs=73.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC----------C------CCcceecccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP----------D------GETHIKDAIPIGIMGF   65 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~----------~------~~~~~~~~~~~~~~~~   65 (110)
                      ||+.|+.|+|   +.++|||||||.||++++++.+|++|||++....          .      ...........||.-|
T Consensus       705 eIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalY  781 (1351)
T KOG1035|consen  705 EILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALY  781 (1351)
T ss_pred             HHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeee
Confidence            6899999999   8999999999999999999999999999987611          0      0111112234689999


Q ss_pred             cccceeccCC---CCchhhHHHHHHHHHHHHh
Q 043407           66 VATEYVTTGD---YNEKCDVFSFGVLLLVLLT   94 (110)
Q Consensus        66 ~~pe~~~~~~---~~~~~d~~s~g~~~~~~~~   94 (110)
                      .|||.+....   |+.++|+||+|++++||+.
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y  813 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY  813 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHhc
Confidence            9999987654   8999999999999999963

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.86  E-value=1.4e-21  Score=124.69  Aligned_cols=100  Identities=22%  Similarity=0.367  Sum_probs=79.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC------------cceecccccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE------------THIKDAIPIGIMGFVATE   69 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~------------~~~~~~~~~~~~~~~~pe   69 (110)
                      |++.|++|||   +.+++|+||+|.||+++.++.++++|||.+.......            .........++..|++||
T Consensus       127 ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  203 (335)
T PTZ00024        127 QILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPE  203 (335)
T ss_pred             HHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCCh
Confidence            6889999999   8999999999999999999999999999886543110            000111123566799999


Q ss_pred             eeccCC-CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           70 YVTTGD-YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        70 ~~~~~~-~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .+.+.. ++.++|+||+|++++++++|..||.+.+.
T Consensus       204 ~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~  239 (335)
T PTZ00024        204 LLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE  239 (335)
T ss_pred             hcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            886543 68899999999999999999999976653

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.86  E-value=1.8e-21  Score=120.96  Aligned_cols=97  Identities=25%  Similarity=0.327  Sum_probs=78.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........ .......++..|++||.+.....+.++|
T Consensus       125 ~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~D  200 (275)
T cd05046         125 QIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSD  200 (275)
T ss_pred             HHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcccccccccCcccc-cccCCceeEEeecChhhhccCCCCchhh
Confidence            6889999999   88999999999999999999999999998764322111 1111224566799999988777889999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~  102 (110)
                      +||+|++++++++ |..||...
T Consensus       201 i~slG~~l~~l~~~~~~p~~~~  222 (275)
T cd05046         201 VWSFGVLMWEVFTQGELPFYGL  222 (275)
T ss_pred             HHHHHHHHHHHHhCCCCCcccc
Confidence            9999999999998 78888654

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.85  E-value=2.2e-21  Score=119.25  Aligned_cols=96  Identities=23%  Similarity=0.439  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.++.|||   +.+++|+|++|.||+++.+ ..++++|||++.........   ....++..|++||.+.....+.++
T Consensus       109 ~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  182 (256)
T cd08220         109 QILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKA---YTVVGTPCYISPELCEGKPYNQKS  182 (256)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccc---cccccCCcccCchhccCCCCCccc
Confidence            6789999999   8999999999999999855 45799999998765433221   122467789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||...+
T Consensus       183 Dv~slG~~l~~l~~~~~~~~~~~  205 (256)
T cd08220         183 DIWALGCVLYELASLKRAFEAAN  205 (256)
T ss_pred             chHHHHHHHHHHHhCCCCcccCc
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.85  E-value=2e-21  Score=121.70  Aligned_cols=94  Identities=27%  Similarity=0.437  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|+||+++.++.++++|||++.........    ...++..|++||.+....++.++|
T Consensus       113 ~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~y~~pE~~~~~~~~~~~D  185 (287)
T cd06621         113 SVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG----TFTGTSFYMAPERIQGKPYSITSD  185 (287)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccccccc----cccCCccccCHHHhcCCCCCchhh
Confidence            6889999999   899999999999999999999999999997654322111    124566899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||+|+++|++++|..||...
T Consensus       186 v~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         186 VWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             HHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999765

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.85  E-value=2.4e-21  Score=120.71  Aligned_cols=97  Identities=28%  Similarity=0.455  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.+||   +.+++|+|++|.||+++.++.++++|||++.........  .....++..|++||.+....++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~D  183 (277)
T cd06641         109 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDSKAD  183 (277)
T ss_pred             HHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhh--hccccCCccccChhhhccCCCCchhh
Confidence            6788999999   899999999999999999999999999987654332211  12234677899999998878889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       184 v~slG~~l~~l~~g~~p~~~~~  205 (277)
T cd06641         184 IWSLGITAIELAKGEPPHSELH  205 (277)
T ss_pred             HHHHHHHHHHHHcCCCCCCccc
Confidence            9999999999999999997544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=3.5e-22  Score=133.76  Aligned_cols=101  Identities=24%  Similarity=0.415  Sum_probs=86.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||.+||+||.   ++++|||||..+|.|+..+..+|++|||+++.|..+....-... --...|.|||.+..+.++.++|
T Consensus       373 QIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA-KFPIKWTAPEsLAyNtFSiKSD  448 (1157)
T KOG4278|consen  373 QISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA-KFPIKWTAPESLAYNTFSIKSD  448 (1157)
T ss_pred             HHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc-cCcccccCcccccccccccchh
Confidence            7899999999   89999999999999999999999999999998876543332222 1345799999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      +|+||+++||+.| |-.||.+.+-..
T Consensus       449 VWAFGVLLWEIATYGMsPYPGidlSq  474 (1157)
T KOG4278|consen  449 VWAFGVLLWEIATYGMSPYPGIDLSQ  474 (1157)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCccHHH
Confidence            9999999999998 999999876443

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.85  E-value=2.3e-21  Score=120.88  Aligned_cols=97  Identities=22%  Similarity=0.345  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.++.|||   +.+++|+||+|+||+++.++.++++|||++.........   ....++..|++||.+.. ..++.++
T Consensus       107 ~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~  180 (283)
T cd07830         107 QILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY---TDYVSTRWYRAPEILLRSTSYSSPV  180 (283)
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc---CCCCCcccccCceeeecCcCcCCcc
Confidence            7889999999   899999999999999999999999999988655332211   11246678999998754 4468899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||||++++++++|..||...+.
T Consensus       181 Di~s~G~~l~el~~g~~~~~~~~~  204 (283)
T cd07830         181 DIWALGCIMAELYTLRPLFPGSSE  204 (283)
T ss_pred             chhhHHHHHHHHHhCCCccCCCCh
Confidence            999999999999999999976654

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.85  E-value=2.7e-21  Score=118.56  Aligned_cols=99  Identities=33%  Similarity=0.458  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.|||   +.+++|+|++|+||+++.++.++++|||.+................++..|++||.......+.++|
T Consensus       109 ~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  185 (260)
T cd06606         109 QILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAAD  185 (260)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhh
Confidence            6789999999   7999999999999999999999999999887665433211112235677899999998887889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||....
T Consensus       186 v~slG~il~~l~~g~~p~~~~~  207 (260)
T cd06606         186 IWSLGCTVIEMATGKPPWSELG  207 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.85  E-value=2e-21  Score=123.74  Aligned_cols=99  Identities=25%  Similarity=0.364  Sum_probs=75.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-----cccccccccccccceeccC--
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-----DAIPIGIMGFVATEYVTTG--   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~~~pe~~~~~--   74 (110)
                      |++.||+|||   +.+++||||||+||+++.++.+++.||+.............     .....++..|++||.+.+.  
T Consensus       109 qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (328)
T cd08226         109 GALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLY  185 (328)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCC
Confidence            7899999999   89999999999999999999999999875432211110000     0111244569999998763  


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++.++|+||+|++++++++|..||....
T Consensus       186 ~~~~~~DiwslG~~l~el~~g~~p~~~~~  214 (328)
T cd08226         186 GYNVKSDIYSVGITACELATGRVPFQDML  214 (328)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence            46789999999999999999999997653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=7.3e-22  Score=120.15  Aligned_cols=103  Identities=19%  Similarity=0.383  Sum_probs=84.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee--cccccccccccccceeccC-CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DAIPIGIMGFVATEYVTTG-DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~-~~~~   78 (110)
                      ++..|+.|+|   ...++|||+|+.|++++.++.++++|||+++.++.......  ......+..|.+||.+.+. .+++
T Consensus       132 ~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~  208 (376)
T KOG0669|consen  132 GLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGP  208 (376)
T ss_pred             HHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCC
Confidence            3568999999   89999999999999999999999999999976643221111  1122357789999999875 4889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      ..|+|+.||++.||+++.+.+++.+.+.+
T Consensus       209 ~iDiWgAgCimaeMwtrspimqgnteqqq  237 (376)
T KOG0669|consen  209 PIDIWGAGCIMAEMWTRSPIMQGNTEQQQ  237 (376)
T ss_pred             cchhHhHHHHHHHHHccCccccCChHHHH
Confidence            99999999999999999999999876654

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.85  E-value=2.1e-21  Score=124.33  Aligned_cols=99  Identities=19%  Similarity=0.388  Sum_probs=77.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCccee-cccccccccccccceecc-CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTT-GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~   78 (110)
                      |+++|+.|||   +.+++|+||||.||+++. +..++++|||.+........... .....++..|+|||.+.. ..++.
T Consensus       122 qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  198 (342)
T cd07854         122 QLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTK  198 (342)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCc
Confidence            7899999999   899999999999999974 45789999999865432111110 111245678999998654 44678


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|+.||.+.+
T Consensus       199 ~~DiwSlGvil~el~~g~~pf~~~~  223 (342)
T cd07854         199 AIDMWAAGCIFAEMLTGKPLFAGAH  223 (342)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999999999999997654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.85  E-value=6.4e-21  Score=116.88  Aligned_cols=97  Identities=33%  Similarity=0.545  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+++|+.|+|   +.+++|+||+|.||+++.++.++++|||++........  ......++..|++||.......+.++|
T Consensus       101 qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~D  175 (250)
T cd05123         101 EIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTFCGTPEYLAPEVLLGKGYGKAVD  175 (250)
T ss_pred             HHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCCcCCccccChHHhCCCCCCchhh
Confidence            6889999999   89999999999999999999999999998865533211  112224677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|++|++++++++|..||...+
T Consensus       176 ~~slG~~~~~l~~g~~p~~~~~  197 (250)
T cd05123         176 WWSLGVLLYEMLTGKPPFYAED  197 (250)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCC
Confidence            9999999999999999996554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.2e-21  Score=119.01  Aligned_cols=97  Identities=31%  Similarity=0.487  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.++.+||   +.+++|+|++|.||+++.++.++++|||.+.........  .....++..|++||.......+.++|
T Consensus       107 ~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~D  181 (254)
T cd06627         107 QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD--DASVVGTPYWMAPEVIEMSGASTASD  181 (254)
T ss_pred             HHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--ccccccchhhcCHhhhcCCCCCcchh
Confidence            6889999999   899999999999999999999999999998765443321  12224677899999987777889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|++|++++++++|..||...+
T Consensus       182 v~~lG~~l~~l~~g~~p~~~~~  203 (254)
T cd06627         182 IWSLGCTVIELLTGNPPYYDLN  203 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999986543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=3.4e-21  Score=124.65  Aligned_cols=97  Identities=23%  Similarity=0.356  Sum_probs=79.7

Q ss_pred             HHHHHHHHhcC------CCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-
Q 043407            3 IANALAYLHVG------FPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-   75 (110)
Q Consensus         3 i~~~l~~lh~~------~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-   75 (110)
                      ++.||+|||..      .+.+|+|||||+.|||+.++..+-++|||++.++.............||.+|||||++.+.. 
T Consensus       316 marGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgain  395 (534)
T KOG3653|consen  316 MARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAIN  395 (534)
T ss_pred             HHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcc
Confidence            57899999952      24589999999999999999999999999998887665555556678999999999987643 


Q ss_pred             CC-----chhhHHHHHHHHHHHHhCCCCc
Q 043407           76 YN-----EKCDVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        76 ~~-----~~~d~~s~g~~~~~~~~g~~p~   99 (110)
                      +.     .+.|+||+|.++||++++-.-+
T Consensus       396 l~d~~Afkr~DvYamgLVLWEi~SRC~~~  424 (534)
T KOG3653|consen  396 LQDRDAFKRIDVYAMGLVLWEIASRCTDA  424 (534)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            22     5689999999999999865433

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.85  E-value=4.2e-21  Score=119.29  Aligned_cols=99  Identities=26%  Similarity=0.463  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc------------------ceecccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------------------HIKDAIPIGIM   63 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~------------------~~~~~~~~~~~   63 (110)
                      |++.|+.+||   +.+++|+|++|.||+++.++.++++|||++........                  ........++.
T Consensus       110 ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (280)
T cd05581         110 EILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA  186 (280)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCc
Confidence            6889999999   89999999999999999999999999998865433221                  01122234667


Q ss_pred             cccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           64 GFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        64 ~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .|++||.......+.++|+||+|++++++++|+.||...+
T Consensus       187 ~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  226 (280)
T cd05581         187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN  226 (280)
T ss_pred             cccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            8999999888888899999999999999999999997654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.85  E-value=2.4e-21  Score=131.72  Aligned_cols=100  Identities=22%  Similarity=0.313  Sum_probs=80.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-------cccccccccccccceec--
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-------DAIPIGIMGFVATEYVT--   72 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-------~~~~~~~~~~~~pe~~~--   72 (110)
                      |++.|+.+||.. +.++||||||.+|+|+..++..||+|||-+..-........       ......|+.|.+||++.  
T Consensus       152 dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly  230 (738)
T KOG1989|consen  152 DVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY  230 (738)
T ss_pred             HHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh
Confidence            578899999955 56799999999999999999999999998754322221111       12235778999999984  


Q ss_pred             -cCCCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           73 -TGDYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        73 -~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                       +...+.++|+|++||++|-+.-...||...
T Consensus       231 sg~pI~eKsDIWALGclLYkLCy~t~PFe~s  261 (738)
T KOG1989|consen  231 SGLPIGEKSDIWALGCLLYKLCYFTTPFEES  261 (738)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence             456889999999999999999999999765

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.85  E-value=2.2e-21  Score=122.63  Aligned_cols=93  Identities=27%  Similarity=0.415  Sum_probs=77.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.......      ...++..|++||.+.   ....+.
T Consensus       123 ~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  193 (308)
T cd06634         123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDG  193 (308)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc------cccCCccccCHHHHhhcccCCCCc
Confidence            6789999999   7899999999999999999999999999876543221      124677899999874   245678


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||...+
T Consensus       194 ~~Di~slG~il~el~~g~~p~~~~~  218 (308)
T cd06634         194 KVDVWSLGITCIELAERKPPLFNMN  218 (308)
T ss_pred             ccchHHHHHHHHHHHcCCCCCcccc
Confidence            8999999999999999999986543

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.85  E-value=2.8e-21  Score=118.89  Aligned_cols=97  Identities=27%  Similarity=0.425  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc-eEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   ..+++|+|++|.||+++.++. ++++|||.+..........  ....+++.|++||......++.++
T Consensus       109 ~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~  183 (257)
T cd08225         109 QISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA--YTCVGTPYYLSPEICQNRPYNNKT  183 (257)
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc--cccCCCccccCHHHHcCCCCCchh
Confidence            6889999999   789999999999999988754 5999999886554322211  122477789999998888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||...+
T Consensus       184 Dv~slG~il~~l~~g~~p~~~~~  206 (257)
T cd08225         184 DIWSLGCVLYELCTLKHPFEGNN  206 (257)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcc
Confidence            99999999999999999997654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=8e-22  Score=130.32  Aligned_cols=98  Identities=27%  Similarity=0.432  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |+++|++|||   +++++|||||..|++++.+..+|++|||++..+.....   ....+|++.|.|||++.+..+ ++++
T Consensus       163 q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~---lqt~cgsppyAaPEl~~g~~y~gpe~  236 (596)
T KOG0586|consen  163 QIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM---LQTFCGSPPYAAPELFNGKKYDGPEV  236 (596)
T ss_pred             HHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeeccccc---ccccCCCCCccChHhhcCcccCCcce
Confidence            7889999999   89999999999999999999999999999876653322   234479999999999988876 5889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++|.++.|..||.+.+-+
T Consensus       237 D~Wslgvvly~LV~GsLPFDG~~lk  261 (596)
T KOG0586|consen  237 DIWSLGVVLYALVEGSLPFDGQNLK  261 (596)
T ss_pred             ehhhhhhhheeeeecccccCCcccc
Confidence            9999999999999999999876544

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.84  E-value=5e-21  Score=117.47  Aligned_cols=97  Identities=26%  Similarity=0.440  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.+||   +.+++|+|++|+||+++.++.++++|||++........  ......+++.|++||.......+.++|
T Consensus       111 ~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~D  185 (258)
T cd08215         111 QLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD--LAKTVVGTPYYLSPELCQNKPYNYKSD  185 (258)
T ss_pred             HHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCcc--eecceeeeecccChhHhccCCCCcccc
Confidence            6889999999   78999999999999999999999999998865543321  112235777899999988888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       186 v~slG~~~~~l~~g~~p~~~~~  207 (258)
T cd08215         186 IWSLGCVLYELCTLKHPFEGEN  207 (258)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCc
Confidence            9999999999999999996654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.84  E-value=2.3e-22  Score=136.61  Aligned_cols=100  Identities=28%  Similarity=0.427  Sum_probs=83.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-----CceEEecccccccCCCCCccee-cccccccccccccceeccCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~   75 (110)
                      |+++|+++||   +-+|+|||+||.|||++..     .+++++|||+++....++...+ .....|+-+|.|||++....
T Consensus       614 q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~  690 (903)
T KOG1027|consen  614 QIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR  690 (903)
T ss_pred             HHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc
Confidence            7889999999   7899999999999999762     4679999999998876544333 33446888999999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhC-CCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTG-QKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g-~~p~~~~~~  104 (110)
                      ...++|++|+||++|+.++| ..||...-.
T Consensus       691 ~~~avDiFslGCvfyYvltgG~HpFGd~~~  720 (903)
T KOG1027|consen  691 KTQAVDIFSLGCVFYYVLTGGSHPFGDSLE  720 (903)
T ss_pred             cCcccchhhcCceEEEEecCCccCCCchHH
Confidence            88899999999999999884 789965433

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.84  E-value=1.8e-22  Score=132.94  Aligned_cols=97  Identities=31%  Similarity=0.472  Sum_probs=83.6

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      .||+.||+|||   -.+|+|+|+||.|+++.+.   -.+|++|||+++..++....+   ...|++.|+|||++....|.
T Consensus       671 tQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr---sVVGTPAYLaPEVLrnkGyN  744 (888)
T KOG4236|consen  671 TQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR---SVVGTPAYLAPEVLRNKGYN  744 (888)
T ss_pred             HHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhh---hhcCCccccCHHHHhhcccc
Confidence            38999999999   7999999999999999765   468999999998876543322   23699999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ..-|+||.|+++|.-++|.+||..++
T Consensus       745 rSLDMWSVGVIiYVsLSGTFPFNEdE  770 (888)
T KOG4236|consen  745 RSLDMWSVGVIIYVSLSGTFPFNEDE  770 (888)
T ss_pred             ccccceeeeEEEEEEecccccCCCcc
Confidence            99999999999999999999996553

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.83  E-value=3.1e-21  Score=127.87  Aligned_cols=100  Identities=23%  Similarity=0.396  Sum_probs=87.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||++||+||.   +.+++|||+.++|+|++.+..+|++|||.++..-+...+.-+....-+.+|||+|.+.-++++.++|
T Consensus       645 qiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSD  721 (807)
T KOG1094|consen  645 QIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASD  721 (807)
T ss_pred             HHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhh
Confidence            7999999999   7899999999999999999999999999988666655555555545667899999999999999999


Q ss_pred             HHHHHHHHHHHHh--CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT--GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~--g~~p~~~~~~  104 (110)
                      +|+||+.+||+++  .+.||+..+.
T Consensus       722 vWafgvTlwE~~~~C~e~Py~~lt~  746 (807)
T KOG1094|consen  722 VWAFGVTLWEVFMLCREQPYSQLTD  746 (807)
T ss_pred             hhhhHHHHHHHHHHHhhCchhhhhH
Confidence            9999999999875  7789976544

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.83  E-value=4e-21  Score=122.66  Aligned_cols=103  Identities=26%  Similarity=0.386  Sum_probs=89.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   ..++||.||..+|.++++.-.+|++|-.+++..-....+........+.+||++|.+....|+..+|
T Consensus       404 Qla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasD  480 (563)
T KOG1024|consen  404 QLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASD  480 (563)
T ss_pred             HHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhh
Confidence            7889999999   8999999999999999999999999998887654444444444445667899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGDR  107 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~~  107 (110)
                      +||||+++||+++ |+.||-..++.|.
T Consensus       481 vWsfGVllWELmtlg~~PyaeIDPfEm  507 (563)
T KOG1024|consen  481 VWSFGVLLWELMTLGKLPYAEIDPFEM  507 (563)
T ss_pred             hHHHHHHHHHHHhcCCCCccccCHHHH
Confidence            9999999999998 9999988877664

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.83  E-value=4.9e-21  Score=111.83  Aligned_cols=102  Identities=18%  Similarity=0.354  Sum_probs=84.9

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      +|++.|+.|||   +.++.|||+||.|.++..++..|+.|||+++-+.-+  ..+......+..|.+|.++.+.. ++..
T Consensus       108 lqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip--vrcysaevvtlwyrppdvlfgakly~ts  182 (292)
T KOG0662|consen  108 LQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTS  182 (292)
T ss_pred             HHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--eEeeeceeeeeeccCcceeeeeehhccc
Confidence            47889999999   899999999999999999999999999998766432  23333446778899999988765 7788


Q ss_pred             hhHHHHHHHHHHHHh-CCCCcccCCcccc
Q 043407           80 CDVFSFGVLLLVLLT-GQKLYSIDEAGDR  107 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~-g~~p~~~~~~~~~  107 (110)
                      .|+||.||++.|+.. |++.|++.+..||
T Consensus       183 idmwsagcifaelanagrplfpg~dvddq  211 (292)
T KOG0662|consen  183 IDMWSAGCIFAELANAGRPLFPGNDVDDQ  211 (292)
T ss_pred             hHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence            999999999999985 8888988765544

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.82  E-value=3e-20  Score=114.69  Aligned_cols=95  Identities=18%  Similarity=0.359  Sum_probs=77.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+|++|.|++++. +.++++|||++..........  ....++..|++||......++.++|
T Consensus       114 ~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~D  187 (260)
T cd08222         114 QLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLA--TTFTGTPYYMSPEALKHQGYDSKSD  187 (260)
T ss_pred             HHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecCCCcccc--cCCCCCcCccCHHHHccCCCCchhh
Confidence            6889999999   899999999999999975 569999999886553322211  1224677899999988777888999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||+|++++++++|..||...
T Consensus       188 v~slG~~~~~l~~~~~~~~~~  208 (260)
T cd08222         188 IWSLGCILYEMCCLAHAFEGQ  208 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCc
Confidence            999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.82  E-value=7.6e-20  Score=129.69  Aligned_cols=93  Identities=30%  Similarity=0.418  Sum_probs=75.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||...+.+++|||+||.||+++.+...++. ++........      ....+++.|+|||++....++.++|
T Consensus       788 ~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sD  860 (968)
T PLN00113        788 GIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSD  860 (968)
T ss_pred             HHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccc
Confidence            78999999996556799999999999999988877765 5443222111      1114678899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||||+++||+++|+.||..
T Consensus       861 v~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        861 IYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             hhhHHHHHHHHHhCCCCCCc
Confidence            99999999999999999854

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=3e-20  Score=120.65  Aligned_cols=102  Identities=28%  Similarity=0.446  Sum_probs=82.9

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCccee-----cccccccccccccceec
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIK-----DAIPIGIMGFVATEYVT   72 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~~~pe~~~   72 (110)
                      |||+.||.||.-. +.+|||-||||.||++.+.   |.+|+.|||+++.+........     .....|+..|++||.+.
T Consensus       575 MQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  575 MQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             HHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence            6899999999833 6799999999999999654   6789999999998866544322     23346888999999986


Q ss_pred             cC----CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           73 TG----DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        73 ~~----~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      -.    ..+.++|+||.|+++|.++.|+.||...-
T Consensus       654 VgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq  688 (775)
T KOG1151|consen  654 VGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ  688 (775)
T ss_pred             cCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence            44    25788999999999999999999996543

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.80  E-value=1.9e-19  Score=109.26  Aligned_cols=94  Identities=36%  Similarity=0.564  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +++.++.+||   +.+++|+|++|.||+++.++.++++|||.+.......   ......+...|++||......++.++|
T Consensus        95 ~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~D  168 (244)
T smart00220       95 QILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVD  168 (244)
T ss_pred             HHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhh
Confidence            5788999999   7899999999999999999999999999987654432   111224677899999988778889999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +|++|++++++++|..||..
T Consensus       169 i~slG~~l~~l~~~~~p~~~  188 (244)
T smart00220      169 VWSLGVILYELLTGKPPFPG  188 (244)
T ss_pred             HHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999976

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.79  E-value=3.3e-19  Score=118.95  Aligned_cols=95  Identities=21%  Similarity=0.263  Sum_probs=72.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-----
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-----   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-----   76 (110)
                      |++.++.|||   +.+++||||||.||+++.++.++++|||++........ ........++.|++||.+.....     
T Consensus       317 ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE~l~~~~~~~~~~  392 (507)
T PLN03224        317 QVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPEELVMPQSCPRAP  392 (507)
T ss_pred             HHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeChhhhcCCCCCCccc
Confidence            6788999999   78999999999999999999999999999865433211 11111234678999998754221     


Q ss_pred             -----------------CchhhHHHHHHHHHHHHhCCC-Ccc
Q 043407           77 -----------------NEKCDVFSFGVLLLVLLTGQK-LYS  100 (110)
Q Consensus        77 -----------------~~~~d~~s~g~~~~~~~~g~~-p~~  100 (110)
                                       ....|+||+|+++++++++.. |+.
T Consensus       393 ~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        393 APAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             hhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence                             123699999999999999874 664

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.79  E-value=1.7e-20  Score=123.17  Aligned_cols=96  Identities=26%  Similarity=0.304  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |+..||..|-   ..+++|.||||+|||+... ..+|++|||-+.......-.    ....+..|.|||++.+.+|+...
T Consensus       544 QLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~i  616 (752)
T KOG0670|consen  544 QLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPI  616 (752)
T ss_pred             HHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCcccccccccccc----HHHHHHhccCcceeecCcccCCc
Confidence            6677899998   7899999999999999765 45699999987544332211    11356689999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||.||.+||+.||+..|+|.+-
T Consensus       617 D~WSvgctLYElYtGkIlFpG~TN  640 (752)
T KOG0670|consen  617 DTWSVGCTLYELYTGKILFPGRTN  640 (752)
T ss_pred             cceeeceeeEEeeccceecCCCCc
Confidence            999999999999999999998753

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=2.1e-19  Score=115.88  Aligned_cols=93  Identities=23%  Similarity=0.368  Sum_probs=73.2

Q ss_pred             cHHHHHHHHh-----cCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccC
Q 043407            2 EIANALAYLH-----VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh-----~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~   74 (110)
                      .++.||++||     +..+..|.|||||+.||++.+++.+-++|+|++..........  ......||.+|||||++...
T Consensus       316 S~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdet  395 (513)
T KOG2052|consen  316 SIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDET  395 (513)
T ss_pred             HHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhh
Confidence            4688999999     3456789999999999999999999999999997665432211  22334799999999998543


Q ss_pred             C----C--CchhhHHHHHHHHHHHHh
Q 043407           75 D----Y--NEKCDVFSFGVLLLVLLT   94 (110)
Q Consensus        75 ~----~--~~~~d~~s~g~~~~~~~~   94 (110)
                      -    |  -..+|+||||.++||+.-
T Consensus       396 in~~~Fesyk~ADIYafgLVlWEiar  421 (513)
T KOG2052|consen  396 INMKHFESYKRADIYAFGLVLWEIAR  421 (513)
T ss_pred             cChhhhhhhhHHHHHHHHHHHHHHHH
Confidence            2    1  256899999999999864

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.78  E-value=4.2e-19  Score=106.96  Aligned_cols=99  Identities=22%  Similarity=0.380  Sum_probs=76.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      |+++||.|||   ++||+|||+||.|++++.. ...+++|+|++.-........-   ...++.|--||.+...+ ++..
T Consensus       140 elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYS  213 (338)
T KOG0668|consen  140 ELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYS  213 (338)
T ss_pred             HHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeee---eeehhhcCCchheeechhcccc
Confidence            6889999999   8999999999999999865 5689999999976644332221   13445677899887654 7788


Q ss_pred             hhHHHHHHHHHHHHhCCCCc-ccCCccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLY-SIDEAGD  106 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~-~~~~~~~  106 (110)
                      -|+|||||++..|+-.+.|| .|.+-.|
T Consensus       214 LD~WS~GcmlA~miFrkepFFhG~dN~D  241 (338)
T KOG0668|consen  214 LDMWSLGCMLASMIFRKEPFFHGHDNYD  241 (338)
T ss_pred             HHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence            99999999999999877665 5554433

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.78  E-value=2.5e-20  Score=114.38  Aligned_cols=98  Identities=22%  Similarity=0.417  Sum_probs=73.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC--CCCceEEecccccccCCCCCcceecccccccccccccceecc---CC-
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GD-   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~-   75 (110)
                      |+++|+.|+|   +.+++|||||.+|||+-  +..++|++|||+............     -...|.+||....   +. 
T Consensus       129 ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~-----~~~~y~~pe~~~~~~ne~~  200 (378)
T KOG1345|consen  129 QLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLE-----YVNNYHAPELCDTVVNEKL  200 (378)
T ss_pred             HHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCceehhhh-----hhcccCCcHHHhhccccce
Confidence            7889999999   89999999999999994  336899999998754433222211     2235667776532   22 


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           76 -YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        76 -~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                       ..+..|+|.||++++.+++|..||+.....++
T Consensus       201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~  233 (378)
T KOG1345|consen  201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK  233 (378)
T ss_pred             EecccccchheeeeeeeeecCCCcchhhhccCc
Confidence             35778999999999999999999997666555

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=1.6e-19  Score=123.53  Aligned_cols=98  Identities=24%  Similarity=0.392  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-----CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-----DY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-----~~   76 (110)
                      +++.|+.+||   .+.++|||+|-.||+++.++.+|+.|||++-....  +..+..+..|++.|||||++...     .+
T Consensus       131 e~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~ty  205 (953)
T KOG0587|consen  131 EILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATY  205 (953)
T ss_pred             HHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCc
Confidence            4678999999   89999999999999999999999999999755433  33445566899999999998543     47


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|++..|+-.|.+|+.+..+
T Consensus       206 d~R~D~WsLGITaIEladG~PPl~DmHP  233 (953)
T KOG0587|consen  206 DYRSDLWSLGITAIEMAEGAPPLCDMHP  233 (953)
T ss_pred             ccccchhhccceeehhcCCCCCccCcch
Confidence            7889999999999999999999876544

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.78  E-value=6.4e-19  Score=106.24  Aligned_cols=96  Identities=34%  Similarity=0.451  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccccccccccccee-ccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV-TTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~-~~~~~~~~~   80 (110)
                      +++.++.+||   +.+++|+|+++.|++++.++.++++|||.+......... ......+...|++||.. ....++.++
T Consensus       106 ~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~  181 (225)
T smart00221      106 QILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAV  181 (225)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchh
Confidence            5778999999   789999999999999999999999999988766543211 11122456679999988 556677899


Q ss_pred             hHHHHHHHHHHHHhCCCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      |+|++|++++++++|+.||..
T Consensus       182 Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      182 DIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             hHHHHHHHHHHHHHCCCCccc
Confidence            999999999999999999966

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.74  E-value=6.1e-18  Score=116.47  Aligned_cols=44  Identities=23%  Similarity=0.368  Sum_probs=39.8

Q ss_pred             ccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           61 GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        61 ~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |++.|++||++.+..++.++|+||+||++||+++|+.||.+...
T Consensus       542 GT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~  585 (669)
T cd05610         542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETP  585 (669)
T ss_pred             eCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            47789999999988899999999999999999999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.73  E-value=9.6e-19  Score=116.09  Aligned_cols=92  Identities=24%  Similarity=0.473  Sum_probs=78.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+++||   +.+|+|||||-.|+.++++|-+|++|||-+-..-++.-    -...||..|.|||++.+.+| +...
T Consensus       678 QV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~q  750 (772)
T KOG1152|consen  678 QVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQ  750 (772)
T ss_pred             HHHhcccccc---ccCceecccccccEEEecCCeEEEeeccchhhhcCCCc----ceeeeeccccchhhhCCCccCCCcc
Confidence            7889999999   89999999999999999999999999997654332221    13379999999999988886 5668


Q ss_pred             hHHHHHHHHHHHHhCCCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~  100 (110)
                      |+|++|+++|.++-...||-
T Consensus       751 diwalgillytivykenpyy  770 (772)
T KOG1152|consen  751 DIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhhhhheeeEEEeccCCCc
Confidence            99999999999998888874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.72  E-value=3.2e-18  Score=116.23  Aligned_cols=104  Identities=21%  Similarity=0.433  Sum_probs=87.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc--ceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET--HIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|++|+|   ..++.|||+|++|+++..++.++++|||.+..+.-+-.  ........|+..|+|||.+....|+++
T Consensus       428 qL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr  504 (601)
T KOG0590|consen  428 QLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPR  504 (601)
T ss_pred             HHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcc
Confidence            6788999999   89999999999999999999999999999876543222  133334468889999999999888755


Q ss_pred             -hhHHHHHHHHHHHHhCCCCcccCCccccc
Q 043407           80 -CDVFSFGVLLLVLLTGQKLYSIDEAGDRH  108 (110)
Q Consensus        80 -~d~~s~g~~~~~~~~g~~p~~~~~~~~~~  108 (110)
                       .|+||.|+++..|.+|+.||......+..
T Consensus       505 ~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~  534 (601)
T KOG0590|consen  505 AVDVWSCGIIYICMILGRFPWKVAKKSDNS  534 (601)
T ss_pred             hhhhhhccceEEEEecCCCccccccccccc
Confidence             79999999999999999999877766553

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.68  E-value=2e-17  Score=115.51  Aligned_cols=102  Identities=25%  Similarity=0.385  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC-cce------------eccccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THI------------KDAIPIGIMGFVAT   68 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~------------~~~~~~~~~~~~~p   68 (110)
                      +.+.+++|+|   ..+|+|||+||+|.++..-+.+|+.|||+.+...... +..            .....+|++.|.+|
T Consensus       151 dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  151 DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            4467899999   8999999999999999999999999999987432110 000            01233689999999


Q ss_pred             ceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           69 EYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        69 e~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      |++....|+..+|.|++|+++||.+-|..||-++++.+
T Consensus       228 eVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee  265 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE  265 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH
Confidence            99999999999999999999999999999999997654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.68  E-value=1e-16  Score=102.26  Aligned_cols=101  Identities=21%  Similarity=0.264  Sum_probs=81.6

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-----CceEEecccccc--cCCCCCc----ce-e-cccccccccccc
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAE--SIPDGET----HI-K-DAIPIGIMGFVA   67 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-----~~~~l~dfg~~~--~~~~~~~----~~-~-~~~~~~~~~~~~   67 (110)
                      +|++.+|+++|   +.+++||||||.|+.++..     ..+.+.|||+++  .......    .. . .....||..|.+
T Consensus       129 ~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S  205 (322)
T KOG1164|consen  129 IQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYAS  205 (322)
T ss_pred             HHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcccccc
Confidence            37889999999   8999999999999999865     358999999998  4321111    11 1 123358999999


Q ss_pred             cceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           68 TEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        68 pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +....+...+.+.|+||++.++.++..|..||++.+.
T Consensus       206 ~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~  242 (322)
T KOG1164|consen  206 INVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM  242 (322)
T ss_pred             HHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence            9988888999999999999999999999999977654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.64  E-value=1.1e-15  Score=95.51  Aligned_cols=99  Identities=34%  Similarity=0.578  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcce----ecccccccccccccceecc---
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHI----KDAIPIGIMGFVATEYVTT---   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~---   73 (110)
                      |++.++.++|   +.+++|||+||.|++++... .+++.|||.+..........    ......++..|++||.+..   
T Consensus       109 ~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~  185 (384)
T COG0515         109 QILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSL  185 (384)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCC
Confidence            6788899999   88999999999999999888 79999999987554332211    2234468889999999987   


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .......|+|++|+.+++++.|..||....
T Consensus       186 ~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~  215 (384)
T COG0515         186 AYASSSSDIWSLGITLYELLTGLPPFEGEK  215 (384)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            467889999999999999999999976554

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.62  E-value=1.7e-15  Score=89.91  Aligned_cols=86  Identities=31%  Similarity=0.542  Sum_probs=69.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      +++.++.+||   +.+++|+|++|.||+++. ++.++++||+.+........  ......+...|++||..... ..+.+
T Consensus       100 ~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~  174 (215)
T cd00180         100 QILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEK  174 (215)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCch
Confidence            5788999999   789999999999999998 89999999998876543321  11112456678999988776 67888


Q ss_pred             hhHHHHHHHHHHH
Q 043407           80 CDVFSFGVLLLVL   92 (110)
Q Consensus        80 ~d~~s~g~~~~~~   92 (110)
                      .|+|++|++++++
T Consensus       175 ~D~~~lg~~~~~l  187 (215)
T cd00180         175 SDIWSLGVILYEL  187 (215)
T ss_pred             hhhHHHHHHHHHH
Confidence            9999999999876

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.60  E-value=3.8e-16  Score=100.06  Aligned_cols=94  Identities=32%  Similarity=0.440  Sum_probs=72.5

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCC--------------CCC----------------
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIP--------------DGE----------------   51 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~--------------~~~----------------   51 (110)
                      +..||.++|   +.+|+|||+||.|++.+.. +.-.+.|||++....              ...                
T Consensus       141 ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~  217 (418)
T KOG1167|consen  141 LLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATAS  217 (418)
T ss_pred             HHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccccc
Confidence            568999999   8999999999999999754 667899999986210              000                


Q ss_pred             ---ccee---------cccccccccccccceeccC-CCCchhhHHHHHHHHHHHHhCCCCc
Q 043407           52 ---THIK---------DAIPIGIMGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        52 ---~~~~---------~~~~~~~~~~~~pe~~~~~-~~~~~~d~~s~g~~~~~~~~g~~p~   99 (110)
                         ...+         .....||++|.|||++... ..+.++|+||.|+++..++++..||
T Consensus       218 ~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PF  278 (418)
T KOG1167|consen  218 KPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPF  278 (418)
T ss_pred             CCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhcccccc
Confidence               0000         1123588999999998654 4788899999999999999999887

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.59  E-value=1.4e-15  Score=95.06  Aligned_cols=95  Identities=22%  Similarity=0.293  Sum_probs=66.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-------   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-------   74 (110)
                      |++..+++||   ..+++|+||+|+|++++.+|.+.++||+.......   ....  ...+..+.+||.....       
T Consensus       153 Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~~--~~~~~~~~PPe~~~~~~~~~~~~  224 (288)
T PF14531_consen  153 QMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGT---RYRC--SEFPVAFTPPELESCAGQFGQNN  224 (288)
T ss_dssp             HHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTE---EEEG--GGS-TTTS-HHHHHHHTSCHHSE
T ss_pred             HHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCc---eeec--cCCCcccCChhhhhhhcccCccc
Confidence            6778899999   79999999999999999999999999976544322   1111  1234567888866432       


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           75 -DYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        75 -~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                       .++.+.|.|++|+++|.++.+..||....+
T Consensus       225 ~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~  255 (288)
T PF14531_consen  225 APYTFATDAWQLGITLYSLWCGRLPFGLSSP  255 (288)
T ss_dssp             EEE-HHHHHHHHHHHHHHHHHSS-STCCCGG
T ss_pred             ceeeeccCHHHHHHHHHHHHHccCCCCCCCc
Confidence             367889999999999999999999975543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.59  E-value=2.7e-16  Score=104.95  Aligned_cols=89  Identities=31%  Similarity=0.417  Sum_probs=77.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +++.++.++|   +.++++||+|+.||+++.+|.+++.|||+++.....+..      +|+..||+||++.  .....+|
T Consensus       105 elaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~------cgt~eymApEI~~--gh~~a~D  173 (612)
T KOG0603|consen  105 ELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAAD  173 (612)
T ss_pred             HHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc------ccchhhhhhHhhh--ccCCccc
Confidence            4577899999   899999999999999999999999999998765443322      6888999999987  4567789


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .||+|++.+++++|..||.+
T Consensus       174 ~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  174 WWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             chhhhhhHHHHhhCCCCCch
Confidence            99999999999999999987

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.58  E-value=5.9e-16  Score=94.06  Aligned_cols=102  Identities=20%  Similarity=0.246  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCC-----Ccceecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDG-----ETHIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~-----~~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.-++|+|   .++.|||||||+|.+..-+   ..+.++|||+++..-+.     -+........||.+|.+-....+
T Consensus       119 Qml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g  195 (341)
T KOG1163|consen  119 QMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG  195 (341)
T ss_pred             HHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhh
Confidence            5677899999   8999999999999999755   45689999999876432     23333344568888877665666


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      ...+.+.|+-|+|.++.++--|..||++..+..
T Consensus       196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t  228 (341)
T KOG1163|consen  196 IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT  228 (341)
T ss_pred             hhhhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence            667788999999999999999999999876543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.58  E-value=4.4e-15  Score=93.71  Aligned_cols=100  Identities=16%  Similarity=0.336  Sum_probs=83.7

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-----CceEEecccccccCCCCCc-----ceecccccccccccccce
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAESIPDGET-----HIKDAIPIGIMGFVATEY   70 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-----~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~   70 (110)
                      +|++.-++++|   ++.+|.|||||+|+|+...     ..+.++|||+++...++.+     ........||.+||+-..
T Consensus       131 ~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINT  207 (449)
T KOG1165|consen  131 KQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINT  207 (449)
T ss_pred             HHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeec
Confidence            36778899999   8999999999999999754     4579999999987654332     223345569999999998


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           71 VTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        71 ~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ..+...+.+.|+-++|-++.+.+-|..||+|-.
T Consensus       208 HlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  208 HLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             cccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence            889999999999999999999999999998864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.52  E-value=1.6e-14  Score=101.93  Aligned_cols=96  Identities=21%  Similarity=0.276  Sum_probs=73.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC--CCCCccee---cccccccccccccceeccC--
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI--PDGETHIK---DAIPIGIMGFVATEYVTTG--   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~--~~~~~~~~---~~~~~~~~~~~~pe~~~~~--   74 (110)
                      |++.|+..||   ..+|+|+|||.+||++++=+++.+.||.-.+..  +.+.+..-   .-+......|.|||.+...  
T Consensus       128 QLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~  204 (1431)
T KOG1240|consen  128 QLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALG  204 (1431)
T ss_pred             HHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhcccc
Confidence            7899999999   899999999999999999999999999866532  32221111   0111233468999998542  


Q ss_pred             --------C-CCchhhHHHHHHHHHHHHh-CCCCcc
Q 043407           75 --------D-YNEKCDVFSFGVLLLVLLT-GQKLYS  100 (110)
Q Consensus        75 --------~-~~~~~d~~s~g~~~~~~~~-g~~p~~  100 (110)
                              . .+++.|++|+||++.|+++ |++||.
T Consensus       205 ~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~  240 (1431)
T KOG1240|consen  205 KTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT  240 (1431)
T ss_pred             ccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence                    1 5678999999999999987 788873

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.52  E-value=2e-15  Score=99.19  Aligned_cols=79  Identities=27%  Similarity=0.532  Sum_probs=67.4

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccccCCCCC----cceecccccccccccccceeccCCCCchhhHHHHHHHHHH
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLV   91 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~   91 (110)
                      ++.+|+|+||.||+...+..+++.|||+...+....    ...+.....|+..||+||.+.+..++.++|+|++|++++|
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~E  454 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAE  454 (516)
T ss_pred             ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHH
Confidence            678999999999999999999999999976654433    2223344579999999999999999999999999999999


Q ss_pred             HHh
Q 043407           92 LLT   94 (110)
Q Consensus        92 ~~~   94 (110)
                      ++.
T Consensus       455 L~~  457 (516)
T KOG1033|consen  455 LLI  457 (516)
T ss_pred             HHH
Confidence            987

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.50  E-value=3.8e-14  Score=85.22  Aligned_cols=100  Identities=16%  Similarity=0.075  Sum_probs=70.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCC-CCCceEECCCCceEEecccccccCCCCCcc----e-e------cccccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNI-KLSSILFDEDHVAKLFDFSLAESIPDGETH----I-K------DAIPIGIMGFVATE   69 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl-~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~-~------~~~~~~~~~~~~pe   69 (110)
                      |++.++.++|   +.+++|||| ||.||+++.++.++++|||++.........    . +      ......++.++.|+
T Consensus        99 qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~  175 (218)
T PRK12274         99 AARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPV  175 (218)
T ss_pred             HHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Confidence            5778999999   899999999 799999999999999999999755433321    1 0      01111344555554


Q ss_pred             eeccC-CCC-chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           70 YVTTG-DYN-EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        70 ~~~~~-~~~-~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ..... ..+ .+.+.++.|.-+|.++|+..+.-+++.
T Consensus       176 ~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~  212 (218)
T PRK12274        176 ERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE  212 (218)
T ss_pred             HHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence            33222 223 556778889999999999887655543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=5.5e-14  Score=90.89  Aligned_cols=69  Identities=22%  Similarity=0.188  Sum_probs=53.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCC-CCCceEECCCCceEEecccccccCCCCCcceec------ccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNI-KLSSILFDEDHVAKLFDFSLAESIPDGETHIKD------AIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl-~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~   73 (110)
                      |+++++.|||   +.+++|||| ||.||+++.++.++++|||+++...........      ....++..|++||.+..
T Consensus       119 ~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        119 SAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             HHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            5789999999   899999999 999999998899999999999866443222110      12246667889988754

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.43  E-value=2.3e-13  Score=95.92  Aligned_cols=94  Identities=18%  Similarity=0.157  Sum_probs=74.6

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECC-------CCceEEecccccccCCCCCcceecccccccccccccceecc
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDE-------DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      +|++..++.||   ..+|||+||||+|.++..       ...++|+|||-+..+.--....+......+-.+.++|+..+
T Consensus       801 ~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g  877 (974)
T KOG1166|consen  801 CQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG  877 (974)
T ss_pred             HHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC
Confidence            36788899999   899999999999999932       35689999998876542222222222245667889999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCC
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQK   97 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~   97 (110)
                      ++++.++|.|.++.+++.|+-|+.
T Consensus       878 rpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  878 RPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             CCCchhhhhHHHHHHHHHHHHHHH
Confidence            999999999999999999998874

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.42  E-value=4.4e-14  Score=95.51  Aligned_cols=92  Identities=29%  Similarity=0.453  Sum_probs=74.2

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCch
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNEK   79 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~~   79 (110)
                      .+.+++|||   +.+=+|||||-.||++.+.+.+++.|||++-....  ...+.....|++.||+||+-.   ...+...
T Consensus       121 tl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita--ti~KrksfiGtpywmapEvaaverkggynql  195 (829)
T KOG0576|consen  121 TLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA--TIAKRKSFIGTPYWMAPEVAAVERKGGYNQL  195 (829)
T ss_pred             hhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh--hhhhhhcccCCccccchhHHHHHhccccccc
Confidence            356899999   78889999999999999999999999998754432  223334457999999999864   3457899


Q ss_pred             hhHHHHHHHHHHHHhCCCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~   99 (110)
                      +|+|+.|+...|+-.-+.|.
T Consensus       196 cdiwa~gitAiel~eLqppl  215 (829)
T KOG0576|consen  196 CDIWALGITAIELGELQPPL  215 (829)
T ss_pred             ccccccccchhhhhhcCCcc
Confidence            99999999998887766653

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.38  E-value=1.2e-12  Score=84.72  Aligned_cols=97  Identities=19%  Similarity=0.210  Sum_probs=68.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC--C--CceEEecccccccCCC----CCcceecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--D--HVAKLFDFSLAESIPD----GETHIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~--~--~~~~l~dfg~~~~~~~----~~~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |+++|+.|||   +.++.|||+|++||++.-  +  -...++|||-|---..    ........-..|....||||+...
T Consensus       349 QlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  349 QLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            7899999999   899999999999999943  2  2458889985421110    000000111245667899998754


Q ss_pred             CC------CCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           74 GD------YNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        74 ~~------~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .+      --.++|.|+.|.+.||++....||-+
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~  459 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK  459 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence            32      12678999999999999999999865

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.31  E-value=4.1e-13  Score=81.90  Aligned_cols=73  Identities=15%  Similarity=0.251  Sum_probs=54.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      +++.++..+|   ..+++|+|++|.|++++.++ ++++|||............              ..+....+..++|
T Consensus       143 ~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~d--------------~~vler~y~~~~d  204 (232)
T PRK10359        143 KIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAKD--------------RIDLERHYGIKNE  204 (232)
T ss_pred             HHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhHH--------------HHHHHhHhccccc
Confidence            5778999999   89999999999999999888 9999999765442211110              0223344567899


Q ss_pred             HHHHHHHHHHH
Q 043407           82 VFSFGVLLLVL   92 (110)
Q Consensus        82 ~~s~g~~~~~~   92 (110)
                      +|++|+.+...
T Consensus       205 i~~lg~~~~~~  215 (232)
T PRK10359        205 IKDLGYYLLIY  215 (232)
T ss_pred             ccceeEeehHH
Confidence            99999876644

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.28  E-value=4.7e-12  Score=83.36  Aligned_cols=68  Identities=22%  Similarity=0.242  Sum_probs=56.4

Q ss_pred             CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           33 DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        33 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ..++|+.|||-++.....-+..     ..|+.|.+||++.+..|+..+|+||++|+.+|++||...|..+...
T Consensus       390 di~vKIaDlGNACW~~khFT~D-----IQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~  457 (590)
T KOG1290|consen  390 DIRVKIADLGNACWVHKHFTED-----IQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGE  457 (590)
T ss_pred             ceeEEEeeccchhhhhhhhchh-----hhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCC
Confidence            3578999999987654333222     5678899999999999999999999999999999999999776554

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.25  E-value=7.7e-12  Score=74.58  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=39.3

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCC
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD   49 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~   49 (110)
                      |++.++.++|   . .+++|||+||.||+++ ++.++++|||++.....
T Consensus       125 ~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         125 QVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             HHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence            6788999999   6 8999999999999998 78999999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.25  E-value=8.6e-12  Score=77.58  Aligned_cols=96  Identities=20%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEe--cccccccCCCCCcceecccccccccccccceeccCCCC-
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLF--DFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-   77 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-   77 (110)
                      ++++.|++|||+.. .-+.--.+++..++++.+-..+++  |-.++  +..       ......+.||+||.+...+-+ 
T Consensus       296 ldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfs--fqe-------~gr~y~pawmspealqrkped~  365 (448)
T KOG0195|consen  296 LDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFS--FQE-------VGRAYSPAWMSPEALQRKPEDL  365 (448)
T ss_pred             HHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceee--eec-------cccccCcccCCHHHHhcCchhc
Confidence            36788999999753 333334688899999888766655  32221  111       111345689999998766533 


Q ss_pred             --chhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           78 --EKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        78 --~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                        ..+|+|||++++||+.|+..||..-.+.+
T Consensus       366 n~raadmwsfaillwel~trevpfadlspme  396 (448)
T KOG0195|consen  366 NIRAADMWSFAILLWELNTREVPFADLSPME  396 (448)
T ss_pred             chhhhhHHHHHHHHHHhhccccccccCCchh
Confidence              56899999999999999999997765544

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.24  E-value=9.3e-12  Score=82.72  Aligned_cols=100  Identities=24%  Similarity=0.331  Sum_probs=74.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD------   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~------   75 (110)
                      +|+.||.|+|.  +....|+.+++.|.+++....+|+.|||+.................-..-|.+||.+....      
T Consensus        56 di~~Gl~ylh~--s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~  133 (484)
T KOG1023|consen   56 DISKGLAYLHN--SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLES  133 (484)
T ss_pred             HHHHHHHHHhc--CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccc
Confidence            47889999995  3344999999999999999999999999976554211111111112234588999886531      


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           76 -YNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        76 -~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                       .+.+.|+||+|++++|++..+.||....
T Consensus       134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~  162 (484)
T KOG1023|consen  134 ALTQKGDIYSFGIIMYEILFRSGPFDLRN  162 (484)
T ss_pred             cccccCCeehHHHHHHHHHhccCcccccc
Confidence             3567899999999999999999997643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=2.2e-12  Score=88.22  Aligned_cols=105  Identities=26%  Similarity=0.379  Sum_probs=84.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCC-CCcceecccccc-cccccccceeccCC-CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPD-GETHIKDAIPIG-IMGFVATEYVTTGD-YN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~-~~~~~~~~~~~~-~~~~~~pe~~~~~~-~~   77 (110)
                      |+..++.|+|.  ..++.|+|+||.|.+++.++ ..+..|||++..... ...........| ++.|++||...+.. ..
T Consensus       131 ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~  208 (601)
T KOG0590|consen  131 QLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRG  208 (601)
T ss_pred             hhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcC
Confidence            56678899995  57899999999999999998 899999999987765 343344444467 88999999887743 46


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCccccc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEAGDRH  108 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~~~~~  108 (110)
                      +..|+||.|+++..+++|..|+.-....+..
T Consensus       209 ~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~  239 (601)
T KOG0590|consen  209 PSVDVWSLGIVLSAMLTGELPWDFPSRKDGR  239 (601)
T ss_pred             CCcccccccccccccccCCCCcccccccccc
Confidence            7789999999999999999999776665543

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.21  E-value=1.3e-11  Score=73.71  Aligned_cols=41  Identities=15%  Similarity=0.270  Sum_probs=36.6

Q ss_pred             cHHHHHHHH-hcCCCCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407            2 EIANALAYL-HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus         2 qi~~~l~~l-h~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      |++.++.++ |   ..+++|||+||.||+++ ++.++++|||++..
T Consensus       125 qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~  166 (190)
T cd05147         125 QVIQIMRILYQ---DCRLVHADLSEYNLLYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             HHHHHHHHHHH---hCCcccCCCCHHHEEEE-CCcEEEEEcccccc
Confidence            678999999 7   78999999999999998 47899999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.08  E-value=1.1e-10  Score=71.93  Aligned_cols=44  Identities=25%  Similarity=0.335  Sum_probs=39.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~   48 (110)
                      |++.++.+||   +.+++|+|+||.||+++.++.++++|||.+....
T Consensus       150 ~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        150 AIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            6789999999   8999999999999999988899999999876543

>smart00090 RIO RIO-like kinase

Probab=99.03  E-value=2.8e-10  Score=70.10  Aligned_cols=43  Identities=19%  Similarity=0.250  Sum_probs=38.4

Q ss_pred             cHHHHHHHHhcCCCCC-eEEcCCCCCceEECCCCceEEecccccccCC
Q 043407            2 EIANALAYLHVGFPRP-IVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~-~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~   48 (110)
                      |++.++.+||   ..+ ++|+|+||.||+++ ++.++++|||.+....
T Consensus       156 qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      156 DILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             HHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            6889999999   788 99999999999998 7889999999876443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.00  E-value=5.5e-10  Score=66.92  Aligned_cols=43  Identities=21%  Similarity=0.275  Sum_probs=38.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      +++.++.++|   ..+++|+|++|.||+++.++.++++|||.+...
T Consensus       133 ~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         133 EILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             HHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            5678899999   799999999999999999999999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.87  E-value=2.5e-09  Score=63.36  Aligned_cols=42  Identities=24%  Similarity=0.270  Sum_probs=37.6

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      +++.++.++|   . .+++|+|++|.||+++ ++.++++|||.+...
T Consensus       122 ~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119         122 QILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             HHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence            5778999999   6 8999999999999999 889999999987544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.85  E-value=4.3e-09  Score=62.94  Aligned_cols=42  Identities=31%  Similarity=0.426  Sum_probs=38.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      |++.++.++|   +.+++|+|++|.|++++ ++.++++|||.+...
T Consensus        98 ~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        98 EIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            5788999999   89999999999999998 789999999987654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.84  E-value=2.5e-09  Score=72.72  Aligned_cols=43  Identities=26%  Similarity=0.387  Sum_probs=38.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~   48 (110)
                      |++.++.+||   +.+++|||+||.||++ .++.++++|||+++...
T Consensus       436 ~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~  478 (535)
T PRK09605        436 KVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD  478 (535)
T ss_pred             HHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence            6788999999   8999999999999999 67889999999987643

>PRK10345 hypothetical protein; Provisional

Probab=98.82  E-value=4.3e-09  Score=63.77  Aligned_cols=39  Identities=23%  Similarity=0.279  Sum_probs=31.6

Q ss_pred             cHHHHH-HHHhcCCCCCeEEcCCCCCceEECC----CCceEEecccc
Q 043407            2 EIANAL-AYLHVGFPRPIVFKNIKLSSILFDE----DHVAKLFDFSL   43 (110)
Q Consensus         2 qi~~~l-~~lh~~~~~~~~h~dl~~~nil~~~----~~~~~l~dfg~   43 (110)
                      |++.++ +|||   +.+|+||||||.||+++.    +..++++|++.
T Consensus       112 ~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345        112 QLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             HHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            455566 8999   899999999999999974    34799999443

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.79  E-value=2.7e-08  Score=65.65  Aligned_cols=96  Identities=27%  Similarity=0.333  Sum_probs=72.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      .++.+.+.||   ..+..-+|+++.|+++++++.+.+.|-.-...- ....  ....+.|.+.|++||.-.     +...
T Consensus       125 nlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~-~ng~--~~~cpVg~~eftPPElQ~~~sf~g~~r  198 (637)
T COG4248         125 NLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN-ANGT--LHLCPVGVSEFTPPELQTLPSFVGFER  198 (637)
T ss_pred             HHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeec-cCCc--eEecccCccccCCHHHhccccccccCC
Confidence            3678899999   889999999999999999999998874322111 1111  122346888999999654     3345


Q ss_pred             CchhhHHHHHHHHHHHHhC-CCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTG-QKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g-~~p~~~~~  103 (110)
                      +...|.+.+|+++++++.| +.||+|..
T Consensus       199 ~~~hD~FGLavLiF~lL~ggrHPysGI~  226 (637)
T COG4248         199 TANHDNFGLAVLIFHLLFGGRHPYSGIP  226 (637)
T ss_pred             CccccchhHHHHHHHHHhcCCCCCCccc
Confidence            6778999999999999875 89998763

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.77  E-value=8.4e-09  Score=62.16  Aligned_cols=42  Identities=29%  Similarity=0.420  Sum_probs=37.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      +++.++.++|   ..+++|+|++|.||+++ ++.++++|||.+...
T Consensus       103 ~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~  144 (211)
T PRK14879        103 EIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS  144 (211)
T ss_pred             HHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence            5678999999   89999999999999998 788999999987653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.77  E-value=7.1e-09  Score=73.91  Aligned_cols=102  Identities=22%  Similarity=0.266  Sum_probs=79.4

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC------CC---------------------C--cc
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP------DG---------------------E--TH   53 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~------~~---------------------~--~~   53 (110)
                      +.++.++||   ...+.|+|++|.|++...++..++.+|+......      ..                     .  ..
T Consensus       913 ~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~  989 (1205)
T KOG0606|consen  913 RVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEA  989 (1205)
T ss_pred             HHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchh
Confidence            457889999   6669999999999999999988888887322110      00                     0  00


Q ss_pred             eecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           54 IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        54 ~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      .......+++.|.+||...+......+|.|+.|+.++|.++|..||...+++.+
T Consensus       990 ~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~ 1043 (1205)
T KOG0606|consen  990 RRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQI 1043 (1205)
T ss_pred             hccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhh
Confidence            112344688899999999999989999999999999999999999988877654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.72  E-value=2.4e-09  Score=73.26  Aligned_cols=97  Identities=27%  Similarity=0.402  Sum_probs=72.3

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCC------CCcceec-ccccccccccccceeccCC
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD------GETHIKD-AIPIGIMGFVATEYVTTGD   75 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~------~~~~~~~-~~~~~~~~~~~pe~~~~~~   75 (110)
                      ++.|+.|+|.  ..+++|+++.|++|.+...+..|+.-|+++.....      ....... ........|.+||++....
T Consensus       108 v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~  185 (700)
T KOG2137|consen  108 VADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT  185 (700)
T ss_pred             ccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence            4568999997  78999999999999999999999999987654332      1111111 1112345689999998877


Q ss_pred             CCchhhHHHHHHHHHHHH-hCCCCccc
Q 043407           76 YNEKCDVFSFGVLLLVLL-TGQKLYSI  101 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~-~g~~p~~~  101 (110)
                      -+.++|++|+|++++.+. .|...+..
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a  212 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAA  212 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhc
Confidence            789999999999999888 45554443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.64  E-value=6.3e-08  Score=54.82  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=37.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      +++.+++.+|.....+++|+|++|.|++++..+.+++.||+.+..
T Consensus        94 ~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          94 QLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            467789999943225799999999999999889999999997643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.45  E-value=3.3e-07  Score=53.37  Aligned_cols=41  Identities=29%  Similarity=0.396  Sum_probs=34.6

Q ss_pred             cHHHHHHHHhcCCCCC-----eEEcCCCCCceEECCCCceEEeccccccc
Q 043407            2 EIANALAYLHVGFPRP-----IVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~-----~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      +++.+++.||   ..+     ++|+|++|.||+++ ++.++++||+.+..
T Consensus        91 ~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          91 KIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            4678899999   555     59999999999998 66799999997643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.44  E-value=2.8e-07  Score=55.35  Aligned_cols=42  Identities=14%  Similarity=0.211  Sum_probs=34.9

Q ss_pred             cHHHHHHHH-hcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            2 EIANALAYL-HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~l-h~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      |++.++..+ |   +.+++|+|+++.||++. ++.+.++||+.+...
T Consensus       132 ~i~~~l~~l~H---~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         132 QVLSMMKQLYK---ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHHHHHHHHH---hCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            466778877 7   78999999999999996 467999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.44  E-value=9.1e-07  Score=60.92  Aligned_cols=88  Identities=22%  Similarity=0.238  Sum_probs=62.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||.  +.+++|+++.-+.++++..|..++.+|.++...+......  ......-.+..|+.+....  ...|
T Consensus       112 qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~--~~~~~~~s~~~P~~~~~s~--~s~D  185 (690)
T KOG1243|consen  112 QILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA--KSLYLIESFDDPEEIDPSE--WSID  185 (690)
T ss_pred             HHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc--ccchhhhcccChhhcCccc--cchh
Confidence            78999999985  7799999999999999999999999998765433221100  1101111344554333222  3469


Q ss_pred             HHHHHHHHHHHHhC
Q 043407           82 VFSFGVLLLVLLTG   95 (110)
Q Consensus        82 ~~s~g~~~~~~~~g   95 (110)
                      .|.||+++++++.|
T Consensus       186 ~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  186 SWGLGCLIEELFNG  199 (690)
T ss_pred             hhhHHHHHHHHhCc
Confidence            99999999999988

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.39  E-value=6.8e-07  Score=57.43  Aligned_cols=94  Identities=23%  Similarity=0.393  Sum_probs=66.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc--eecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      ||++||.|||+. ...++|+++.-+.+++..++.+|+........-+.....  .......+.+.|.+|+.-...+..-.
T Consensus       184 qIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a  262 (458)
T KOG1266|consen  184 QILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGA  262 (458)
T ss_pred             HHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccc
Confidence            789999999987 789999999999999998888887753221111111000  01112245667888886666666778


Q ss_pred             hhHHHHHHHHHHHHhCC
Q 043407           80 CDVFSFGVLLLVLLTGQ   96 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~   96 (110)
                      +|+|+||....++..+.
T Consensus       263 ~dIy~fgmcAlemailE  279 (458)
T KOG1266|consen  263 SDIYKFGMCALEMAILE  279 (458)
T ss_pred             hhhhhhhHHHHHHHHhe
Confidence            99999999988887665

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.18  E-value=3.7e-06  Score=56.30  Aligned_cols=39  Identities=13%  Similarity=0.209  Sum_probs=34.7

Q ss_pred             HHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC
Q 043407            7 LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (110)
Q Consensus         7 l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~   48 (110)
                      +..+|   ..+++|+|++|.||+++.++.++++|||.+...+
T Consensus       270 l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       270 LNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            56678   7899999999999999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.17  E-value=1.8e-06  Score=58.42  Aligned_cols=91  Identities=32%  Similarity=0.420  Sum_probs=69.0

Q ss_pred             HHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCc---ceecccccccccccccceeccCCCCchhh
Q 043407            6 ALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGET---HIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         6 ~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+..+|   ...++|-|++|.|+++..+ ..+++.||++...+....-   ........+...|++||...+ .++...|
T Consensus       234 al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~d  309 (524)
T KOG0601|consen  234 ALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASD  309 (524)
T ss_pred             cccccC---CCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhh
Confidence            788999   7899999999999999998 8899999999876654321   111112245567999997654 4478899


Q ss_pred             HHHHHHHHHHHHhCCCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~  100 (110)
                      ++++|.+..+...+..+..
T Consensus       310 i~sl~ev~l~~~l~~~~~~  328 (524)
T KOG0601|consen  310 IFSLGEVILEAILGSHLPS  328 (524)
T ss_pred             hcchhhhhHhhHhhccccc
Confidence            9999999998887765443

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.11  E-value=3.2e-06  Score=51.18  Aligned_cols=43  Identities=28%  Similarity=0.298  Sum_probs=37.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~   47 (110)
                      +++..+.-||   ..+++|+|+++.||+++.+.   .+.++||+.++..
T Consensus       126 ~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  126 ALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            4567789999   89999999999999998877   7899999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.09  E-value=2e-06  Score=57.55  Aligned_cols=30  Identities=23%  Similarity=0.445  Sum_probs=26.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED   33 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~   33 (110)
                      |++.||.|||.  +.+|||.||||.|||+..+
T Consensus       195 qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  195 QVLTGLDYLHR--ECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHHHHHHHH--hcCccccCCCcceeeeecc
Confidence            78899999997  5699999999999999654

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.06  E-value=4.3e-06  Score=52.63  Aligned_cols=41  Identities=17%  Similarity=0.269  Sum_probs=35.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-------CCceEEecccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-------DHVAKLFDFSLAE   45 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-------~~~~~l~dfg~~~   45 (110)
                      +++..+.-||   ..+++|+|+++.||+++.       +..+.++||+.+.
T Consensus       146 ~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        146 RVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            4677889999   899999999999999975       4678999999774

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.06  E-value=7.2e-06  Score=48.84  Aligned_cols=38  Identities=26%  Similarity=0.389  Sum_probs=32.7

Q ss_pred             HHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            6 ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         6 ~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      -+.-||   ..+++|+|+.+.|+++...+ +.++|||+++..
T Consensus       104 ~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642         104 LVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             HHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            467789   89999999999999997665 999999998643

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.90  E-value=3.8e-05  Score=45.97  Aligned_cols=34  Identities=29%  Similarity=0.410  Sum_probs=26.6

Q ss_pred             HHhcCCCCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407            9 YLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus         9 ~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      -+|   ..+++|+|+.+.||+++.+ .+.++|||.+..
T Consensus       122 ~~~---~~givHGDLs~~NIlv~~~-~~~iIDf~qav~  155 (188)
T PF01163_consen  122 MLH---KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVD  155 (188)
T ss_dssp             HHH---CTTEEESS-STTSEEEETT-CEEE--GTTEEE
T ss_pred             HHH---hcCceecCCChhhEEeecc-eEEEEecCccee
Confidence            357   7899999999999999877 899999987644

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.77  E-value=6.3e-06  Score=55.88  Aligned_cols=88  Identities=26%  Similarity=0.294  Sum_probs=62.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceeccccccccccc--ccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFV--ATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~--~pe~~~~~~~~~   78 (110)
                      |++.++.++|   ++.++|+|++|.||++..+ +..++.||+.+..+.......     ...-++.  ++.......+..
T Consensus       374 q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~-----~~~~r~~p~~~~~~e~~~~~~  445 (524)
T KOG0601|consen  374 QILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVF-----HHIDRLYPIAEILLEDYPHLS  445 (524)
T ss_pred             HHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccceecccc-----cccccccccchhhcccccccc
Confidence            6778889999   8999999999999999876 677888988775432211111     1222333  344444556778


Q ss_pred             hhhHHHHHHHHHHHHhCCC
Q 043407           79 KCDVFSFGVLLLVLLTGQK   97 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~   97 (110)
                      +.|+++++.-+.+.+++..
T Consensus       446 ~~~~~sl~~~~~e~~~~~~  464 (524)
T KOG0601|consen  446 KADIFSLGLSVDEAITGSP  464 (524)
T ss_pred             ccccccccccccccccCcc
Confidence            8999999998888887764

>PRK09902 hypothetical protein; Provisional

Probab=97.72  E-value=4e-05  Score=46.64  Aligned_cols=42  Identities=14%  Similarity=0.141  Sum_probs=36.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc--eEEeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAES   46 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~--~~l~dfg~~~~   46 (110)
                      +++..++-||   ..++.|+|+.+.||+++.++.  +.++||..++.
T Consensus       136 ~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        136 AVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            4678899999   899999999999999986666  89999976543

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.71  E-value=5.9e-05  Score=45.20  Aligned_cols=42  Identities=29%  Similarity=0.462  Sum_probs=33.7

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccC
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESI   47 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~   47 (110)
                      |-+.+.-||   ...++|+||...||++.+++   .+.++|||++...
T Consensus       122 iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  122 IGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             HHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            345678899   89999999999999997654   3479999997543

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.55  E-value=0.00011  Score=45.11  Aligned_cols=38  Identities=16%  Similarity=0.224  Sum_probs=32.7

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEeccccc
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~   44 (110)
                      +.+++.-+|   +.|+.|+|.+|.|++++.++ ++++|++..
T Consensus       144 i~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i~iID~~~k  181 (229)
T PF06176_consen  144 IVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-IRIIDTQGK  181 (229)
T ss_pred             HHHHHHHHH---HcCCccCCCCcCcEEEECCc-EEEEECccc
Confidence            567899999   89999999999999988554 999999754

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.52  E-value=8.7e-05  Score=50.98  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=30.3

Q ss_pred             CCCeEEcCCCCCceEECCCC----ceEEecccccccCC
Q 043407           15 PRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIP   48 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~----~~~l~dfg~~~~~~   48 (110)
                      ..+++|+|++|.||+++.++    .+.++|||.....+
T Consensus       278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            57999999999999999887    89999999876654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.03  E-value=0.00075  Score=40.71  Aligned_cols=31  Identities=26%  Similarity=0.503  Sum_probs=26.4

Q ss_pred             CCCeEEcCCCCCceEECC--CCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDE--DHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~   45 (110)
                      ...++|+|+++.||+++.  ++.+.++||+.+.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            468999999999999988  5668999998653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.99  E-value=0.0017  Score=41.18  Aligned_cols=30  Identities=30%  Similarity=0.342  Sum_probs=27.5

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~   44 (110)
                      ..+++|+|+++-||+++.++.+.++||--+
T Consensus       220 ~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         220 RRGIVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             HcCccccCCchheEEEecCCCEEEEeCccc
Confidence            479999999999999999999999999654

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.81  E-value=0.0015  Score=40.24  Aligned_cols=31  Identities=13%  Similarity=0.332  Sum_probs=26.2

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..+++|+|+.+.|++++.+....++||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            4568999999999999877667899998764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK05231 homoserine kinase; Provisional

Probab=96.74  E-value=0.0013  Score=42.32  Aligned_cols=32  Identities=25%  Similarity=0.579  Sum_probs=27.2

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ..+++|+|+.+.|++++.+....++||+.+..
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            46899999999999998766668999988754

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.44  E-value=0.0039  Score=39.76  Aligned_cols=32  Identities=22%  Similarity=0.317  Sum_probs=27.6

Q ss_pred             CCCeEEcCCCCCceEECCC----CceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.||+++.+    +.+.++||+.+..
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            5688999999999999874    7899999987754

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=96.38  E-value=0.0029  Score=40.22  Aligned_cols=32  Identities=28%  Similarity=0.601  Sum_probs=27.4

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ..+++|+|+.|.|++++.++.+.++||+.+..
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            35799999999999999887789999987643

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.35  E-value=0.0059  Score=38.07  Aligned_cols=37  Identities=19%  Similarity=0.165  Sum_probs=31.1

Q ss_pred             HHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEeccc
Q 043407            5 NALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFS   42 (110)
Q Consensus         5 ~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg   42 (110)
                      +++.-.|++ ....+|+|..|+||+-++.|.+|+.|-+
T Consensus       152 ~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  152 KDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence            456677865 5689999999999999999999999853

The function of this family is unknown.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.32  E-value=0.004  Score=38.18  Aligned_cols=31  Identities=19%  Similarity=0.469  Sum_probs=26.5

Q ss_pred             CCCeEEcCCCCCceEECC-CCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDE-DHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.||+++. ++.+.++||..+.
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            357899999999999997 5789999998654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.32  E-value=0.0029  Score=38.29  Aligned_cols=31  Identities=26%  Similarity=0.430  Sum_probs=21.5

Q ss_pred             CCCeEEcCCCCCceEEC-CCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFD-EDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.||+++ .++.+.++||+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccce
Confidence            56899999999999999 55666899997653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.30  E-value=0.0036  Score=40.10  Aligned_cols=32  Identities=31%  Similarity=0.595  Sum_probs=27.8

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ..+++|+|+++.|++++.++...++||+.+..
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            47899999999999999887778999988743

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.30  E-value=0.0041  Score=38.42  Aligned_cols=31  Identities=13%  Similarity=0.205  Sum_probs=26.7

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.|++++.+....++||+.+.
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            4578999999999999987778999998653

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.16  E-value=0.0068  Score=37.38  Aligned_cols=30  Identities=3%  Similarity=0.105  Sum_probs=25.7

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.|.|++++.++ +.++||+.+.
T Consensus       152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CCceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            34678999999999999878 9999998654

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.09  E-value=0.0069  Score=39.53  Aligned_cols=29  Identities=28%  Similarity=0.512  Sum_probs=25.8

Q ss_pred             eEEcCCCCCceEECCCCc-eEEeccccccc
Q 043407           18 IVFKNIKLSSILFDEDHV-AKLFDFSLAES   46 (110)
Q Consensus        18 ~~h~dl~~~nil~~~~~~-~~l~dfg~~~~   46 (110)
                      +||.|+.+.||+++.+.. +.++||+.+..
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccccc
Confidence            999999999999998875 89999997653

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.03  E-value=0.0069  Score=37.78  Aligned_cols=29  Identities=14%  Similarity=0.246  Sum_probs=25.0

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..++|+|+.+.|++++.++ +.++||+.+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            4689999999999998876 7899998664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.94  E-value=0.012  Score=36.95  Aligned_cols=42  Identities=21%  Similarity=0.234  Sum_probs=33.0

Q ss_pred             HHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         3 i~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ++..+.-|..  ..+++|+||+.-|||+. ++.+.++|++-+...
T Consensus       175 ~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         175 VVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             HHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence            4455555652  37999999999999998 888999999876543

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.85  E-value=0.0096  Score=38.04  Aligned_cols=30  Identities=17%  Similarity=0.341  Sum_probs=25.6

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..+++|+|+.+.|++++. +.+.++||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            368899999999999987 668899998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.80  E-value=0.013  Score=38.11  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=29.0

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ...++|+|+.+.|++++..+.+.|+||+.+...
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            468999999999999999988999999987543

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.73  E-value=0.01  Score=35.98  Aligned_cols=30  Identities=27%  Similarity=0.424  Sum_probs=21.1

Q ss_pred             CCeEEcCCCCCceEE-CCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILF-DEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~-~~~~~~~l~dfg~~~   45 (110)
                      ..+.|.|+.+.||++ ..++.++++||..+.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            467899999999999 888999999998753

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.67  E-value=0.013  Score=37.17  Aligned_cols=32  Identities=28%  Similarity=0.404  Sum_probs=25.9

Q ss_pred             CCCeEEcCCCCCceEECCCCc-eEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHV-AKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~-~~l~dfg~~~~   46 (110)
                      ...++|+|+++.|++++.++. ..++||+.+..
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            457899999999999987444 57999987644

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=95.62  E-value=0.016  Score=34.84  Aligned_cols=32  Identities=22%  Similarity=0.316  Sum_probs=25.8

Q ss_pred             CCCeEEcCCCCCceEECCCC-----ceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDH-----VAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~-----~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.|+++..++     .+.++||..+..
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            35789999999999997543     589999987644

subfamily of choline kinases

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.53  E-value=0.016  Score=34.88  Aligned_cols=29  Identities=10%  Similarity=0.260  Sum_probs=24.6

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ...+|+|+.|.|++++.++ ++++|++.+-
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            4668999999999998776 8899998764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=95.30  E-value=0.06  Score=37.49  Aligned_cols=74  Identities=23%  Similarity=0.381  Sum_probs=53.4

Q ss_pred             CcHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      +|+..||.++|   +.|+.-+-+.+.+|+++...+++++.-|.-.....+..                +.+.   --.+.
T Consensus       400 ~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~----------------~~le---~~Qq~  457 (655)
T KOG3741|consen  400 SQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPT----------------EPLE---SQQQN  457 (655)
T ss_pred             HHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecCCCC----------------cchh---HHhhh
Confidence            48889999999   78888899999999998887888886655443332220                0011   12456


Q ss_pred             hHHHHHHHHHHHHhCC
Q 043407           81 DVFSFGVLLLVLLTGQ   96 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~   96 (110)
                      |.-.+|.++..+.+|.
T Consensus       458 D~~~lG~ll~aLAt~~  473 (655)
T KOG3741|consen  458 DLRDLGLLLLALATGT  473 (655)
T ss_pred             hHHHHHHHHHHHhhcc
Confidence            8888999999988874

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.21  E-value=0.014  Score=37.50  Aligned_cols=32  Identities=25%  Similarity=0.376  Sum_probs=28.2

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ..+++|+|+.+.|++++.++.+.++||..+..
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            45899999999999999988999999987654

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02236 choline kinase

Probab=94.90  E-value=0.031  Score=36.69  Aligned_cols=32  Identities=16%  Similarity=0.372  Sum_probs=26.7

Q ss_pred             CCCeEEcCCCCCceEECC-CCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDE-DHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+++.||+++. ++.+.++||..+..
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            457899999999999975 46799999987654

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=94.74  E-value=0.037  Score=35.13  Aligned_cols=30  Identities=13%  Similarity=0.189  Sum_probs=26.6

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..++|.|+.+.|++.++.+.+.++||.-+.
T Consensus       153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             eeeecCCCCccceEEcCCCcEEEEecccCC
Confidence            358999999999999999999999997653

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.61  E-value=0.063  Score=32.26  Aligned_cols=43  Identities=16%  Similarity=0.151  Sum_probs=33.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEeccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~   44 (110)
                      +++..+.+++......+.-.|++++|+.++.++.++++|..-.
T Consensus        67 ~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v  109 (188)
T PF12260_consen   67 QLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDV  109 (188)
T ss_pred             HHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhc
Confidence            5566677776433356888899999999999999999998654

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=94.56  E-value=0.094  Score=35.28  Aligned_cols=31  Identities=19%  Similarity=0.304  Sum_probs=26.1

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.||++..+ .++++|+.++..
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            5679999999999999765 589999987654

>PRK06148 hypothetical protein; Provisional

Probab=94.47  E-value=0.041  Score=41.12  Aligned_cols=32  Identities=28%  Similarity=0.420  Sum_probs=26.3

Q ss_pred             CCCeEEcCCCCCceEECCCC--c-eEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDH--V-AKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~--~-~~l~dfg~~~~   46 (110)
                      ..++||.|+++.||+++.+.  . ..++|||.+..
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            46899999999999998774  3 46999997654

>PRK11768 serine/threonine protein kinase; Provisional

Probab=94.20  E-value=0.047  Score=35.52  Aligned_cols=30  Identities=17%  Similarity=0.155  Sum_probs=25.0

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ..+++|+|+.+.|++++ + ...++||+.+..
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~~  224 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDARM  224 (325)
T ss_pred             CccceecCCCchhcccc-C-CcEEEeCCCCCC
Confidence            45789999999999995 3 578999998754

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=93.92  E-value=0.06  Score=37.34  Aligned_cols=34  Identities=18%  Similarity=0.256  Sum_probs=29.9

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccccCC
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~   48 (110)
                      ..++.|.|.+|.|+++..++.+-+.|||......
T Consensus       283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             hcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence            4689999999999999999999999999865443

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=93.62  E-value=0.012  Score=45.88  Aligned_cols=82  Identities=12%  Similarity=0.061  Sum_probs=60.0

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhC
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG   95 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g   95 (110)
                      .--+|+++++.|.++..+..+++.++|+.+....  .....+...+++.|+.++....-.++.++|+|..++.+++...|
T Consensus      1359 ~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp--~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~ 1436 (2724)
T KOG1826|consen 1359 NTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP--VLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG 1436 (2724)
T ss_pred             ccchhhhhhhhccceecCCcccccccccccccCc--hHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc
Confidence            3457889999999999999999999999872221  11122333566667777776666777889999999988887766


Q ss_pred             CCCc
Q 043407           96 QKLY   99 (110)
Q Consensus        96 ~~p~   99 (110)
                      ..+|
T Consensus      1437 n~~f 1440 (2724)
T KOG1826|consen 1437 NAYF 1440 (2724)
T ss_pred             cHHH
Confidence            6554

>PRK06149 hypothetical protein; Provisional

Probab=93.53  E-value=0.061  Score=40.06  Aligned_cols=32  Identities=19%  Similarity=0.189  Sum_probs=25.7

Q ss_pred             CCCeEEcCCCCCceEECCCC--c---eEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDH--V---AKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~--~---~~l~dfg~~~~   46 (110)
                      ..++||.|+++.||+++.+.  .   ..++|||.+..
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~  243 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVR  243 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccchh
Confidence            56899999999999998652  2   48999997643

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=93.39  E-value=0.11  Score=33.99  Aligned_cols=30  Identities=10%  Similarity=0.284  Sum_probs=25.3

Q ss_pred             CCeEEcCCCCCceEECC-CCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDE-DHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~   45 (110)
                      ....|.|+.+.||+++. ++.++++||+.+-
T Consensus       182 ~v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        182 VVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             eEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            35799999999999974 5789999998764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=93.29  E-value=0.12  Score=34.45  Aligned_cols=31  Identities=19%  Similarity=0.298  Sum_probs=25.5

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.||++..+. .+++|+.++..
T Consensus       191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~~  221 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAFY  221 (370)
T ss_pred             cceeeeccCCcccEEEcCCC-CEEEcCccccc
Confidence            56899999999999997654 77999886644

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=93.21  E-value=0.11  Score=34.44  Aligned_cols=30  Identities=13%  Similarity=0.287  Sum_probs=27.3

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~   44 (110)
                      ..|+||+|.+--||+++.++.+.++||--+
T Consensus       220 ~~GlIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  220 NHGLIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             HcCceecccchheeEEecCCCEEEeechHh
Confidence            579999999999999999999999999654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=93.20  E-value=0.023  Score=40.39  Aligned_cols=85  Identities=25%  Similarity=0.255  Sum_probs=57.5

Q ss_pred             HHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhhHHH
Q 043407            5 NALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS   84 (110)
Q Consensus         5 ~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s   84 (110)
                      .+++++|   +..=+|+|    ||+.. +...+..+|+.....+...   ......+++.+++||+...+.+....|.|+
T Consensus       347 ~~l~~l~---~~~~~~~d----~~l~s-~~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~  415 (829)
T KOG0576|consen  347 RPLAELH---SSYKVHRD----NILGS-EEEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGS  415 (829)
T ss_pred             ccccccc---cccccCcc----ccccc-ccccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccC
Confidence            3566777   33235555    66544 4667888888765544332   233446888999999998888889999999


Q ss_pred             HHHHHHHHHhCCCCcc
Q 043407           85 FGVLLLVLLTGQKLYS  100 (110)
Q Consensus        85 ~g~~~~~~~~g~~p~~  100 (110)
                      .+.-..++..|..|-.
T Consensus       416 ~~~~~~~~ap~~pPr~  431 (829)
T KOG0576|consen  416 LAVSAIQMAPGLPPRS  431 (829)
T ss_pred             CCcchhhcCCCCCCCC
Confidence            9876666666666544

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=93.12  E-value=0.08  Score=33.68  Aligned_cols=31  Identities=29%  Similarity=0.364  Sum_probs=24.7

Q ss_pred             CCeEEcCCCCCceEECCC--C---ceEEeccccccc
Q 043407           16 RPIVFKNIKLSSILFDED--H---VAKLFDFSLAES   46 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~--~---~~~l~dfg~~~~   46 (110)
                      ..++|+|++..||++..+  +   .+.+.||..+..
T Consensus       215 ~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  215 NVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             eEEEcCccCHHhEeEccccccccccceeeccccccC
Confidence            468999999999999654  2   589999976643

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.68  E-value=0.14  Score=33.97  Aligned_cols=19  Identities=16%  Similarity=0.207  Sum_probs=15.7

Q ss_pred             CCCeEEcCCCCCceEECCC
Q 043407           15 PRPIVFKNIKLSSILFDED   33 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~   33 (110)
                      ....+|-||||+|||+-++
T Consensus       301 c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        301 CDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             cceeeeccCCCCcEEEecC
Confidence            4578999999999999443

>PRK12396 5-methylribose kinase; Reviewed

Probab=92.09  E-value=0.29  Score=33.06  Aligned_cols=31  Identities=16%  Similarity=0.327  Sum_probs=25.6

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.|.||+++.+ .++++|..++..
T Consensus       226 ~~aLlHGDlHtGSI~v~~~-~~kvIDpEFAfy  256 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKND-STKVIDPEFAFY  256 (409)
T ss_pred             chhhccCcCCCCCEEecCC-ceEEEccccccc
Confidence            5689999999999999865 589999766543

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=91.99  E-value=0.18  Score=33.57  Aligned_cols=18  Identities=17%  Similarity=0.211  Sum_probs=15.3

Q ss_pred             CCCeEEcCCCCCceEECC
Q 043407           15 PRPIVFKNIKLSSILFDE   32 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~   32 (110)
                      ....+|-||||+|||+-+
T Consensus       297 c~nF~H~DLKPdNILiFd  314 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIFD  314 (434)
T ss_pred             cceeeecccCcCcEEEec
Confidence            457899999999999944

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=91.96  E-value=0.29  Score=33.05  Aligned_cols=31  Identities=32%  Similarity=0.547  Sum_probs=27.7

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      +-+.-||++..+||+++ +|.+.++||-+++.
T Consensus       340 kf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         340 KFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             cCCcccccccccceeee-cCceEEEEeeeeec
Confidence            44778999999999999 99999999998874

>PLN02876 acyl-CoA dehydrogenase

Probab=91.55  E-value=0.24  Score=36.33  Aligned_cols=31  Identities=19%  Similarity=0.475  Sum_probs=24.4

Q ss_pred             CCeEEcCCCCCceEECCC-C-ceEEeccccccc
Q 043407           16 RPIVFKNIKLSSILFDED-H-VAKLFDFSLAES   46 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~-~-~~~l~dfg~~~~   46 (110)
                      ..++|+|+++.|++++.+ . ...|.|++++..
T Consensus       225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             cceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            469999999999999753 3 357999987643

>PLN02756 S-methyl-5-thioribose kinase

Probab=91.34  E-value=0.41  Score=32.49  Aligned_cols=30  Identities=17%  Similarity=0.340  Sum_probs=24.9

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.||+++.++ .+++|-.++.
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~  258 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAF  258 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence            67899999999999998765 8888866543

>PRK10593 hypothetical protein; Provisional

Probab=89.48  E-value=0.54  Score=30.28  Aligned_cols=28  Identities=21%  Similarity=0.228  Sum_probs=22.1

Q ss_pred             CCCeEEcCCCCCceEECCC-Cc-eEEeccc
Q 043407           15 PRPIVFKNIKLSSILFDED-HV-AKLFDFS   42 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~-~~-~~l~dfg   42 (110)
                      ...++|+|+.+.|++++.+ +. ..++|..
T Consensus       192 ~psLlHGDlw~gNvl~~~~~~~i~~liDPa  221 (297)
T PRK10593        192 NCVLVHGNFTLRSMLKDPRSDQLLAMLNPG  221 (297)
T ss_pred             CCeeEeCCCCcccEEECCCCCceEEEECch
Confidence            3578999999999999865 43 5677765

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=89.48  E-value=0.36  Score=33.81  Aligned_cols=34  Identities=21%  Similarity=0.214  Sum_probs=28.2

Q ss_pred             CCCeEEcCCCCCceEECC----CCceEEecccccccCC
Q 043407           15 PRPIVFKNIKLSSILFDE----DHVAKLFDFSLAESIP   48 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~----~~~~~l~dfg~~~~~~   48 (110)
                      ..|.+|.|-.|.||++.+    +..+.+.|||+....+
T Consensus       319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             hcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            468999999999999984    5678999999875543

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=88.40  E-value=0.41  Score=31.23  Aligned_cols=31  Identities=19%  Similarity=0.456  Sum_probs=25.5

Q ss_pred             CCCeEEcCCCCCceEECCC----CceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~   45 (110)
                      .+.++|||..|.|++...+    ..+.+.||.-+-
T Consensus       199 ~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQDA~  233 (351)
T COG3178         199 PKVLVHRDFHSRNLMWTADRAGADRVGVLDFQDAL  233 (351)
T ss_pred             CceeeeccccCccceecCCccCCCCCceeehhhhh
Confidence            5789999999999999765    578999996553

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=85.03  E-value=0.51  Score=30.41  Aligned_cols=27  Identities=22%  Similarity=0.314  Sum_probs=18.7

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDF   41 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~df   41 (110)
                      +..++|+||.+.|++.+.++...+.|=
T Consensus       187 ~PsLlHGDLW~GN~~~~~~g~p~l~DP  213 (288)
T PF03881_consen  187 KPSLLHGDLWSGNVGFDADGEPVLFDP  213 (288)
T ss_dssp             --EEE-SS-SGGGEEEETTE-EEE-S-
T ss_pred             CceeeEcCccccceeecCCCCceeecc
Confidence            457899999999999999988888884

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	110
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-12
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		8e-12
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-09
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		4e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-07
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		2e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-06
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-06
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-06
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		4e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-05
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		6e-05
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-05
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		7e-05
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		7e-05
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		7e-05
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		7e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		7e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		8e-05
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-05
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-04
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		1e-04
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		1e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-04
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		1e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-04
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		3e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		3e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		3e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		4e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		4e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		4e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		4e-04
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-04
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		5e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		5e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		5e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		5e-04
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		5e-04
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		5e-04
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		6e-04
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		6e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		6e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		6e-04
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-04
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-04
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		7e-04
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		7e-04
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		7e-04
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		7e-04
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-04
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		7e-04
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		7e-04
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		7e-04
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		7e-04
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		7e-04
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		7e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		7e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		7e-04
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		7e-04
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		7e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-04
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		7e-04
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-04
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		7e-04
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		7e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		7e-04
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		7e-04
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		7e-04
3hec_A	348	P38 In Complex With Imatinib Length = 348		7e-04
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		7e-04
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		7e-04
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		7e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		7e-04
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		7e-04
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		7e-04
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		7e-04
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		7e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		7e-04
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		7e-04
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-04
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		7e-04
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		7e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		8e-04
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		8e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		8e-04
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		8e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		9e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   + H+  A+  G +
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GTI 207
Query: 64  GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSI 101
           G +A EY++TG  +EK DVF +G       TGQ+ + +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 245

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   + H+  A+  G +
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GXI 199
Query: 64  GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSI 101
           G +A EY++TG  +EK DVF +G       TGQ+ + +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L YLH    R I+ +++K  +IL DE+ V K+ DF +++   + G+TH+   +  G 
Sbjct: 149 ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK-GT 204
Query: 63  MGFVATEYVTTGDYNEKCDVFSFG 86
           +G++  EY   G   EK DV+SFG
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFG 228

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L YLH    R I+ +++K  +IL DE+ V K+ DF +++   +  +TH+   +  G 
Sbjct: 149 ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK-GT 204
Query: 63  MGFVATEYVTTGDYNEKCDVFSFG 86
           +G++  EY   G   EK DV+SFG
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFG 228

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YLH   P PIV +N+K  ++L D+ +  K+ DF L+       T +      G
Sbjct: 145 DVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAG 201
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLY 99
              ++A E +     NEK DV+SFG       T Q+ +
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+  AL YLH    + I+++++K  +IL D++   K+ DF  A+ +PD    +      G
Sbjct: 114 EVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-----CG 165
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
              ++A E V+T  YN+  D +SFG
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFG 190

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A  I   +TH+ +   
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK- 165
Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEAG 105
            G   ++A E     +Y+EKCDVFS+G       T +K +  DE G
Sbjct: 166 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF--DEIG 208

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A  I   +TH+ +   
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK- 164
Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEAG 105
            G   ++A E     +Y+EKCDVFS+G       T +K +  DE G
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF--DEIG 207

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------------ESI 47
           +I  AL+Y+H    + I+ +N+K  +I  DE    K+ DF LA              +++
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 48  PDGETHIKDAIPIGIMGFVATEYVT-TGDYNEKCDVFSFG 86
           P    ++  A  IG   +VATE +  TG YNEK D +S G
Sbjct: 181 PGSSDNLTSA--IGTAXYVATEVLDGTGHYNEKIDXYSLG 218

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YLH   P PIV +++K  ++L D+ +  K+ DF L+         +      G
Sbjct: 145 DVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAG 201
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLY 99
              ++A E +     NEK DV+SFG       T Q+ +
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 171
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 169
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 20/100 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------------ESI 47
           +I  AL+Y+H    + I+ +++K  +I  DE    K+ DF LA              +++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 48  PDGETHIKDAIPIGIMGFVATEYVT-TGDYNEKCDVFSFG 86
           P    ++  A  IG   +VATE +  TG YNEK D++S G
Sbjct: 181 PGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLG 218

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 20/100 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------------ESI 47
           +I  AL+Y+H    + I+ +++K  +I  DE    K+ DF LA              +++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 48  PDGETHIKDAIPIGIMGFVATEYVT-TGDYNEKCDVFSFG 86
           P    ++  A  IG   +VATE +  TG YNEK D++S G
Sbjct: 181 PGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLG 218

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
             GF+A E +   +Y+   D F+ G
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
             GF+A E +   +Y+   D F+ G
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
             GF+A E +   +Y+   D F+ G
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
             GF+A E +   +Y+   D F+ G
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIG 61
           IA+A   L+      I+ +++K ++I+    +  K+ DF +A +I D G +  + A  IG
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSID 102
              +++ E       + + DV+S G       TG+  ++ D
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIG 61
           IA+A   L+      I+ +++K ++IL    +  K+ DF +A +I D G +  + A  IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSID 102
              +++ E       + + DV+S G       TG+  ++ D
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIG 61
           IA+A   L+      I+ +++K ++I+    +  K+ DF +A +I D G +  + A  IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSID 102
              +++ E       + + DV+S G       TG+  ++ D
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIG 61
           IA+A   L+      I+ +++K ++I+    +  K+ DF +A +I D G +  + A  IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSID 102
              +++ E       + + DV+S G       TG+  ++ D
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIG 61
           IA+A   L+      I+ +++K ++I+    +  K+ DF +A +I D G +  + A  IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSID 102
              +++ E       + + DV+S G       TG+  ++ D
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIG 61
           IA+A   L+      I+ +++K ++I+    +  K+ DF +A +I D G +  + A  IG
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSID 102
              +++ E       + + DV+S G       TG+  ++ D
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           AN + +LH       + ++IK ++IL DE   AK+ DF LA +       +  +  +G  
Sbjct: 143 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTT 199
Query: 64  GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEAGDRHWL 110
            ++A E +  G+   K D++SFG       TG  L ++DE  +   L
Sbjct: 200 AYMAPEAL-RGEITPKSDIYSFGVVLLEIITG--LPAVDEHREPQLL 243

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 313
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 310
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           AN + +LH       + ++IK ++IL DE   AK+ DF LA +       +  +  +G  
Sbjct: 134 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT 190
Query: 64  GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEAGDRHWL 110
            + A E +  G+   K D++SFG       TG  L ++DE  +   L
Sbjct: 191 AYXAPEAL-RGEITPKSDIYSFGVVLLEIITG--LPAVDEHREPQLL 234

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           AN + +LH       + ++IK ++IL DE   AK+ DF LA +       +     +G  
Sbjct: 137 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTT 193
Query: 64  GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEAGDRHWL 110
            ++A E +  G+   K D++SFG       TG  L ++DE  +   L
Sbjct: 194 AYMAPEAL-RGEITPKSDIYSFGVVLLEIITG--LPAVDEHREPQLL 237

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 170
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 171
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           AN + +LH       + ++IK ++IL DE   AK+ DF LA +       +     +G  
Sbjct: 143 ANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTT 199
Query: 64  GFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLYSIDEAGDRHWL 110
            ++A E +  G+   K D++SFG       TG  L ++DE  +   L
Sbjct: 200 AYMAPEAL-RGEITPKSDIYSFGVVLLEIITG--LPAVDEHREPQLL 243

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 172
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +   DY    D +  G        G+
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ +NIK  +IL   D   KL DF     I   ++  K +  +G
Sbjct: 125 ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVG 179
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQKLY 99
              ++A E VT   Y  K D++S G        G+  Y
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           M +A   A  ++     ++ +++K S+IL DE    KL DF ++  + D +   + A   
Sbjct: 129 MTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--- 185
Query: 61  GIMGFVATEYV-----TTGDYNEKCDVFSFGXXXXXXXTGQ 96
           G   ++A E +     T  DY+ + DV+S G       TGQ
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + IV++++KL +IL D+D   K+ DF + +    G+    +    G
Sbjct: 127 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF--CG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
              ++A E +    YN   D +SFG        GQ
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 112 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 169 I-KWTAPEAALYGRFTIKSDVWSFG 192

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL     V K+ DF LA  I D E   ++     
Sbjct: 292 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 349 I-KWTAPEAINFGSFTIKSDVWSFG 372

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES--IPDGETHIKDAIP 59
           EI   L +LH    + IV++++KL +IL D+D   K+ DF + +   + D +T+     P
Sbjct: 126 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP 182
Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
                ++A E +    YN   D +SFG        GQ
Sbjct: 183 ----DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + +N++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 113 QIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 170 I-KWTAPEAINYGTFTIKSDVWSFG 193

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           E+A AL +LH +G    I+++++K  +IL DE+   KL DF L++   D   H K A   
Sbjct: 135 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAYSF 187
Query: 61  -GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTG 95
            G + ++A E V    + +  D +SFG       TG
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           E+A AL +LH +G    I+++++K  +IL DE+   KL DF L++   D   H K A   
Sbjct: 134 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAYSF 186
Query: 61  -GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTG 95
            G + ++A E V    + +  D +SFG       TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL     V K+ DF LA  I D E   ++     
Sbjct: 119 QIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 176 I-KWTAPEAINFGSFTIKSDVWSFG 199

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 119 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 176 I-KWTAPEAALYGRFTIKSDVWSFG 199

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           E+A AL +LH +G    I+++++K  +IL DE+   KL DF L++   D   H K A   
Sbjct: 134 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESID---HEKKAYSF 186
Query: 61  -GIMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTG 95
            G + ++A E V    + +  D +SFG       TG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +AY+     +  + ++++ +++L  E  + K+ DF LA  I D E   ++     
Sbjct: 118 QIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 174
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 175 I-KWTAPEAINFGCFTIKSDVWSFG 198

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 179 I-KWTAPEAALYGRFTIKSDVWSFG 202

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 111 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 167
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 168 I-KWTAPEAALYGRFTIKSDVWSFG 191

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 115 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 172 I-KWTAPEAALYGRFTIKSDVWSFG 195

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 119 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 176 I-KWTAPEAALYGRFTIKSDVWSFG 199

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 113 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 169
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E    G +  K DV+SFG
Sbjct: 170 I-KWTAPEAALYGRFTIKSDVWSFG 193

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------- 182
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT--------- 186
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 191
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 192 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA E      +H  + +  
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 61  GIMGFVATEYVTTGDYNE---KCDVFSFGXXXXXXXTGQKLYS 100
            I+ ++A E +   D N    + DV++FG       TGQ  YS
Sbjct: 185 SIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 185
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
            +I   +AYLH    +  + +N+   ++L D D + K+ DF LA+++P+G  + +
Sbjct: 124 QQICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA E      +H  + +  
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 61  GIMGFVATEYVTTGDYNE---KCDVFSFGXXXXXXXTGQKLYS 100
            I+ ++A E +   D N    + DV++FG       TGQ  YS
Sbjct: 185 SIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT--------- 185
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------- 187
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------- 187
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMT--------- 187
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D            
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----------E 178
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
           + GFVAT +    +       YN+  D++S G       TG+ L+
Sbjct: 179 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 174 I-KWTAPEAINYGTFTIKSDVWSFG 197

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D            
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----------E 178
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
           + GFVAT +    +       YN+  D++S G       TG+ L+
Sbjct: 179 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 38.9 bits (89), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 118 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 175 I-KWTAPEAINYGTFTIKSDVWSFG 198

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 200
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 201 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 199
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 200 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 192
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 193 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 192
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 193 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 200
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 201 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 185
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 192
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 193 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 203
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 204 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 176
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 177 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 174 I-KWTAPEAINYGTFTIKSDVWSFG 197

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 125 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 182 I-KWTAPEAINYGTFTIKSDVWSFG 205

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D            
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-----------E 174
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
           + GFVAT +    +       YN+  D++S G       TG+ L+
Sbjct: 175 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 191
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 192 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 131 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 178
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 179 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 221

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 186
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 187 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 119 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 176 I-KWTAPEAINYGTFTIKSDVWSFG 199

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 182
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 143 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 190
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 191 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 176
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 177 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 177
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 178 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 182
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 199
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 200 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 185
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 186 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 177
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 178 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 132 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 179
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 180 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 174 I-KWTAPEAINYGTFTIKSDVWSFG 197

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 182
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 183 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 126 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 183 I-KWTAPEAINYGTFTIKSDVWSFG 206

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 176
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 177 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
            +I   +AYLH    +  + +N+   ++L D D + K+ DF LA+++P+G  + +
Sbjct: 124 QQICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 187
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 188 --GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 123 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFG 86
           I  + A E +  G +  K DV+SFG
Sbjct: 180 I-KWTAPEAINYGTFTIKSDVWSFG 203

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 21/105 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT--------- 180
Query: 62  IMGFVATEYVTTGD-------YNEKCDVFSFGXXXXXXXTGQKLY 99
             G+VAT +    +       YN+  D++S G       TG+ L+
Sbjct: 181 --GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L  LH      IV++++K  +IL D+    ++ D  LA  +P+G+T IK    +G
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR--VG 347
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
            +G++A E V    Y    D ++ G        GQ
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L  LH      IV++++K  +IL D+    ++ D  LA  +P+G+T IK    +G
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR--VG 347
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGXXXXXXXTGQ 96
            +G++A E V    Y    D ++ G        GQ
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	110
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-28
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-24
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-24
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-15
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-14
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-14
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	9e-14
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-13
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-13
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-12
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-12
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-12
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-11
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-10
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-10
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-10
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-10
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-10
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-10
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-10
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-10
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	7e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-10
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-10
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	1e-09
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-09
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-09
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-09
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-09
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	5e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-09
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-09
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-09
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-08
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-08
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-08
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-08
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-08
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-08
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-08
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	6e-08
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-08
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-08
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-07
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-07
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-07
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	6e-07
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	7e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	9e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-06
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	2e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-06
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	3e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-06
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-06
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-06
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-06
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-06
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-06
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-06
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-06
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	5e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-06
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-05
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-05
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-05
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-05
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-05
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	3e-05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-05
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-05
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	5e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-05
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	6e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	6e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	7e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	8e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-04
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	3e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	3e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-04
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	5e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  103 bits (259), Expect = 3e-28
 Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
            A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   +TH+  A+  G 
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV-RGT 198

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
           +G +A EY++TG  +EK DVF +GV+LL L+TGQ+
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 92.3 bits (230), Expect = 4e-24
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 9/102 (8%)

Query: 1   MEI----ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-ETHIK 55
           +EI    A  L YLH      I+ +++K  +IL DE+ V K+ DF +++   +  +TH+ 
Sbjct: 142 LEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198

Query: 56  DAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
             +  G +G++  EY   G   EK DV+SFGV+L  +L  + 
Sbjct: 199 TVV-KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 91.5 bits (228), Expect = 7e-24
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 8/109 (7%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPIG 61
            AN + +LH       + ++IK ++IL DE   AK+ DF LA +      T +   I +G
Sbjct: 142 AANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRI-VG 197

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
              ++A E +  G+   K D++SFGV+LL ++TG    ++DE  +   L
Sbjct: 198 TTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLP--AVDEHREPQLL 243

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 68.6 bits (168), Expect = 3e-15
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 12/110 (10%)

Query: 3   IANALAYLHVGFPR-------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +A  LAYLH   P         I  ++IK  ++L   +  A + DF LA     G++   
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189

Query: 56  DAIPIGIMGFVATEYV-----TTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
               +G   ++A E +        D   + D+++ G++L  L +      
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 66.6 bits (163), Expect = 1e-14
 Identities = 30/101 (29%), Positives = 55/101 (54%), Gaps = 6/101 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIP 59
           ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A  I    T+ K    
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---- 164

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
            G   ++A E     +Y+EKCDVFS+G++L  ++T +K + 
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 65.0 bits (159), Expect = 4e-14
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA          +     
Sbjct: 127 RQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183

Query: 61  GIMGFVATE---YVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G + ++A E      +  Y+ + DV++FG++L  L+TGQ  YS
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 64.3 bits (157), Expect = 9e-14
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 15/109 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH------IKD 56
           IA+ +AYLH      I+ +++   + L  E+    + DF LA  + D +T       +K 
Sbjct: 117 IASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173

Query: 57  AIPIGIMGFVAT------EYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
                    V        E +    Y+EK DVFSFG++L  ++      
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 64.3 bits (157), Expect = 9e-14
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 15/106 (14%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + YLH     PIV +N+K  ++L D+ +  K+ DF L+         +K +  +
Sbjct: 144 YDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS--------RLKASTFL 194

Query: 61  GIMGFVAT------EYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
                  T      E +     NEK DV+SFGV+L  L T Q+ + 
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I + + YLH      IV ++IK  +IL    +     K+ DF L+         ++D + 
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL- 209

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E V    YNEKCDV+S GV++ +LL G
Sbjct: 210 -GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 62.4 bits (152), Expect = 5e-13
 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + YLH      IV +++K  ++L    ++D + K+ DF L+    + +  +K+ + 
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERL- 199

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E V    Y+EKCDV+S GV+L +LL G
Sbjct: 200 -GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 61.2 bits (149), Expect = 1e-12
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 16/112 (14%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA---ESIPDGETHIKDA 57
            EI   + YLH    + I+ K++K  ++ +D   V  + DF L      +  G    K  
Sbjct: 137 QEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLR 192

Query: 58  IPIG---------IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           I  G         I             +++  DVF+ G +   L   +  + 
Sbjct: 193 IQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK 244

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 61.2 bits (149), Expect = 1e-12
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + Y+H      IV +++K  ++L     +D   ++ DF L+      +  +KD I 
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI- 189

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E V  G Y+EKCDV+S GV+L +LL+G
Sbjct: 190 -GTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 20/105 (19%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LA LH      +V   ++   I+ D+     L  F     + DG       +   
Sbjct: 214 QVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL--VRDGARV----VSSV 264

Query: 62  IMGFVATEYVTT-----------GDYNEKCDVFSFGVLLLVLLTG 95
             GF   E                      D ++ G+++  +   
Sbjct: 265 SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 60.9 bits (148), Expect = 2e-12
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + Y+H      IV +++K  +IL    ++D   K+ DF L+         +KD I 
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRI- 184

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E V  G Y+EKCDV+S GV+L +LL+G
Sbjct: 185 -GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 59.6 bits (145), Expect = 4e-12
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 24/114 (21%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDE--------DHVAKLFDFSLAESIPDGET 52
           ++IA  + YLH     PI+ +++K S+IL  +        + + K+ DF LA        
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171

Query: 53  HIKDAIPIGIMGFVAT------EYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
                     M           E +    +++  DV+S+GVLL  LLTG+  + 
Sbjct: 172 ----------MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 59.4 bits (144), Expect = 6e-12
 Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 15/123 (12%)

Query: 1   MEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
               + L +LH           I  +++K  +IL  ++    + D  LA      +T+  
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEV 199

Query: 56  DAIPIGIMG---------FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
           D  P   +G            +            D++SFG++L  +        I E   
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ 259

Query: 107 RHW 109
             +
Sbjct: 260 LPY 262

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 59.4 bits (144), Expect = 6e-12
 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 15/117 (12%)

Query: 1   MEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +  A+ LA+LH+          I  +++K  +IL  ++    + D  LA    D  T   
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTI 204

Query: 56  DAIPIGIMG---------FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
           D  P   +G            +  +   +  ++ D+++ G++   +     +  I E
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.3 bits (139), Expect = 3e-11
 Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +   ALA+LH    + +V  ++K ++I        KL DF L   +             G
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ---EG 218

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E +  G Y    DVFS G+ +L +    +L  
Sbjct: 219 DPRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPH 256

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 56.9 bits (138), Expect = 4e-11
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 17/106 (16%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A  +A+LH      I    +   S++ DED  A++    +  S              
Sbjct: 118 LDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---------- 166

Query: 61  GIMGFVA------TEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G M   A       +           D++SF VLL  L+T +  ++
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFA 212

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 57.4 bits (138), Expect = 4e-11
 Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 19/105 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LA LH      +V   ++   I+ D+     L  F     + DG +    A+   
Sbjct: 219 QVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL--VRDGAS----AVSPI 269

Query: 62  IMGFVATEYVT----------TGDYNEKCDVFSFGVLLLVLLTGQ 96
             GF   E                     D ++ G+ +  +    
Sbjct: 270 GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD 314

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 13/107 (12%)

Query: 1   MEIANALAYLHVGFPRPIV---FK--NIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           ++IA  + Y+      PIV    +  NI L S+  +    AK+ DF L++      + + 
Sbjct: 129 LDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL- 186

Query: 56  DAIPIGIMGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTGQKLYS 100
               +G   ++A E +   +  Y EK D +SF ++L  +LTG+  + 
Sbjct: 187 ----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 55.7 bits (134), Expect = 1e-10
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI   L ++H    R +V++++K ++IL DE  HV ++ D  LA      + H      +
Sbjct: 300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHV-RISDLGLACDFSKKKPHAS----V 351

Query: 61  GIMGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQ 96
           G  G++A E +  G  Y+   D FS G +L  LL G 
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 55.1 bits (133), Expect = 2e-10
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 15/115 (13%)

Query: 3   IANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA 57
           IA+ LA+LH+          I  +++K  +IL  ++    + D  LA  +    T+  D 
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDV 172

Query: 58  IPIGIMG---------FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
                +G            T  V   D  ++ D+++FG++L  +        I E
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 55.2 bits (133), Expect = 2e-10
 Identities = 18/112 (16%), Positives = 36/112 (32%), Gaps = 19/112 (16%)

Query: 3   IANALAYLHVGFPR------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD 56
           +   LAYLH   PR       I  +++   ++L   D    + DF L+  +         
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179

Query: 57  AIPIGIMGFVAT------EY-------VTTGDYNEKCDVFSFGVLLLVLLTG 95
                 +  V T      E               ++ D+++ G++   +   
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 12/97 (12%), Positives = 31/97 (31%), Gaps = 10/97 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++    A L     + +V  +    ++    D    L D S       G      ++P+ 
Sbjct: 202 QLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSAL--WKVGTRGPASSVPVT 256

Query: 62  IMGFVATEYVT--TGDYNEKCDVFSFGVLLLVLLTGQ 96
              +   E++   T  +    + +  G+ +  +    
Sbjct: 257 ---YAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 55.0 bits (133), Expect = 2e-10
 Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 8/96 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + +A++++H      +V +++K  ++LF   +++   K+ DF  A   P     +K   P
Sbjct: 115 LVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--P 169

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
              + + A E +    Y+E CD++S GV+L  +L+G
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSG 205

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + NALAY H    + +V K++K  +ILF         K+ DF LAE     E    +A  
Sbjct: 133 MMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAA- 187

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E V   D   KCD++S GV++  LLTG
Sbjct: 188 -GTALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 54.7 bits (132), Expect = 2e-10
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           +I  A+ +LH      I  +++K  ++L+   ++D V KL DF  A+             
Sbjct: 136 DIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT---- 188

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           P     +VA E +    Y++ CD++S GV++ +LL G
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 54.3 bits (131), Expect = 3e-10
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +I   L +LH   P PI+ +++K  +I         K+ D  LA       +  K  I  
Sbjct: 137 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLK--RASFAKAVI-- 191

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G   F+A E      Y+E  DV++FG+ +L + T +  YS
Sbjct: 192 GTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYS 230

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 54.4 bits (131), Expect = 4e-10
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+ YLH      I  +++K  ++L+     + + KL DF  A+      + +    P
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTT--P 223

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
                +VA E +    Y++ CD++S GV++ +LL G
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 54.0 bits (130), Expect = 5e-10
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            + N+ +Y+H    + I  +++K S+IL D++   KL DF  +E + D +         G
Sbjct: 159 SVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK-------G 209

Query: 62  IMG---FVATEYVTT--GDYNEKCDVFSFGVLLLVLLTG 95
             G   F+  E+ +        K D++S G+ L V+   
Sbjct: 210 SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN 248

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 53.4 bits (129), Expect = 7e-10
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 7/94 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+A+AL Y H    R ++ ++IK  ++L       K+ DF  +   P            G
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT----MCG 174

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            + ++  E +    ++EK D++  GVL    L G
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 53.5 bits (129), Expect = 7e-10
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 16/107 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I  AL+Y+H    + I+ +++K  +I  DE    K+ DF LA+++      +K      
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 62  IMG------FVAT-EYV------TTGDYNEKCDVFSFGVLLLVLLTG 95
                     + T  YV       TG YNEK D++S G++   ++  
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYP 227

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.5 bits (129), Expect = 7e-10
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  A+  +H      IV  ++K ++ L  +  + KL DF +A  +    T +     +G
Sbjct: 135 NMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVG 190

Query: 62  ---------IMGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTGQ 96
                    I    ++          + K DV+S G +L  +  G+
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 53.3 bits (128), Expect = 8e-10
 Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  A+  +H      IV  ++K ++ L  +  + KL DF +A  +    T +     +G
Sbjct: 163 NMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVG 218

Query: 62  ---------IMGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTGQ 96
                    I    ++          + K DV+S G +L  +  G+
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 53.2 bits (128), Expect = 1e-09
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 15/106 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  A+  +H      IV  ++K ++ L  +  + KL DF +A  +    T +     +G
Sbjct: 116 NMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVG 171

Query: 62  -----------IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
                       M        +    + K DV+S G +L  +  G+
Sbjct: 172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 52.9 bits (127), Expect = 1e-09
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 9/99 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAI-- 58
           I +AL YLH    + I  ++IK  + LF  ++    KL DF L++            +  
Sbjct: 177 IFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233

Query: 59  PIGIMGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTG 95
             G   FVA E + T +  Y  KCD +S GVLL +LL G
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+ANAL+Y H    + ++ ++IK  ++L       K+ DF  +   P            G
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CG 169

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            + ++  E +    ++EK D++S GVL    L G
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 52.9 bits (127), Expect = 1e-09
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 20/102 (19%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI   L  LH      IV++++K  +IL D+  H+ ++ D  LA  +P+G+T        
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHI-RISDLGLAVHVPEGQT-------- 341

Query: 61  GIMGFVAT------EYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            I G V T      E V    Y    D ++ G LL  ++ GQ
Sbjct: 342 -IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 52.6 bits (127), Expect = 1e-09
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + Y+H      IV +++K  +IL    ++D   K+ DF L+         +KD I 
Sbjct: 130 VFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRI- 184

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E V  G Y+EKCDV+S GV+L +LL+G
Sbjct: 185 -GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 52.2 bits (126), Expect = 1e-09
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + +A+AY H      +  +++K  + LF     D   KL DF LA     G+  ++  + 
Sbjct: 115 VLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV- 169

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   +V+ + V  G Y  +CD +S GV++ VLL G
Sbjct: 170 -GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 52.1 bits (125), Expect = 2e-09
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 12/102 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESIPDGETHIKD- 56
             + LA+LH      IV +++K  +IL           A + DF L + +  G       
Sbjct: 127 TTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183

Query: 57  AIPIGIMGFVATEYV---TTGDYNEKCDVFSFGVLLLVLLTG 95
           +   G  G++A E +      +     D+FS G +   +++ 
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 52.4 bits (125), Expect = 2e-09
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 9/97 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I++AL YLH      I+ +++K  +I+     +  + K+ D   A+ +  GE        
Sbjct: 130 ISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEF 183

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           +G + ++A E +    Y    D +SFG L    +TG 
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 51.5 bits (124), Expect = 3e-09
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 8/96 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  AL Y H      I+ +++K   +L    +     KL  F +A  + +        + 
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV- 194

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   F+A E V    Y +  DV+  GV+L +LL+G
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 51.4 bits (124), Expect = 4e-09
 Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + +A+ YLH      IV +++K  ++L+   +E+    + DF L++   +G         
Sbjct: 115 VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA---- 167

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G  G+VA E +    Y++  D +S GV+  +LL G
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 51.1 bits (122), Expect = 4e-09
 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 20/119 (16%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF-----------DEDHVAKLFDFSLA---ESI 47
            +   +  +H      I+  +IK  + +            D      L D   +   +  
Sbjct: 180 RMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF 236

Query: 48  PDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
           P G             GF   E ++   +N + D F     +  +L G  +   +E G+
Sbjct: 237 PKGTIFTAK---CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE 292

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 51.1 bits (123), Expect = 5e-09
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   +  LH      IV +++K  +IL D+D   KL DF  +  +  GE  +++    G 
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVC--GT 186

Query: 63  MGFVATE------YVTTGDYNEKCDVFSFGVLLLVLLTG 95
             ++A E            Y ++ D++S GV++  LL G
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 51.4 bits (123), Expect = 5e-09
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 11/95 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL+YLH      +V+ ++K  +I+  E+ + KL D      I             G
Sbjct: 190 EILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDLGAVSRINS------FGYLYG 239

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             GF A E +         D+++ G  L  L    
Sbjct: 240 TPGFQAPE-IVRTGPTVATDIYTVGRTLAALTLDL 273

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 51.1 bits (123), Expect = 5e-09
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+ + H      +V +N+K  ++L     +    KL DF LA  +   +        
Sbjct: 119 ILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA- 174

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G  G+++ E +    Y +  D+++ GV+L +LL G
Sbjct: 175 -GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 50.9 bits (122), Expect = 5e-09
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 12/99 (12%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +  A+++LH      IV +++K  +IL D++   +L DF  +  +  GE  +++    G 
Sbjct: 209 LLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LRELC--GT 262

Query: 63  MGFVATE------YVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G++A E        T   Y ++ D+++ GV+L  LL G
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 50.8 bits (122), Expect = 6e-09
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 9/97 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVA-KLFDFSLAESIPDGETHIKDAI 58
           I   + YLH    + +V +++K S+IL+     +  + ++ DF  A+ +      +    
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-- 179

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           P     FVA E +    Y+  CD++S GVLL  +LTG
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 50.3 bits (121), Expect = 7e-09
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 3   IANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +  AL   H        ++ +++K +++  D     KL DF LA  +    +  K  +  
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-- 177

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   +++ E +    YNEK D++S G LL  L    
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 50.4 bits (121), Expect = 8e-09
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 15/104 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA A+ +LH    + ++ +++K S+I F  D V K+ DF L  ++ D +   +  +   
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-DQDEEEQTVLTPM 181

Query: 62  IMGFVATEYVTT-----------GDYNEKCDVFSFGVLLLVLLT 94
                 T  V T             Y+ K D+FS G++L  LL 
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 50.1 bits (120), Expect = 9e-09
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 16/109 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +   A+ ++H   P PI+ +++K+ ++L       KL DF  A +I     +   A    
Sbjct: 144 QTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRA 202

Query: 62  IMGFVATEYVTT--------------GDYNEKCDVFSFGVLLLVLLTGQ 96
           ++    T   TT                  EK D+++ G +L +L   Q
Sbjct: 203 LVEEEITRN-TTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 25/115 (21%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFD-------------EDHVAKLFDFSLAESIPD 49
           IA+ +A+LH      I+ +++K  +IL               E+    + DF L + +  
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180

Query: 50  GETHIKDAI--PIGIMGFVATE-------YVTTGDYNEKCDVFSFGVLLLVLLTG 95
           G++  +  +  P G  G+ A E         T        D+FS G +   +L+ 
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 50.2 bits (120), Expect = 1e-08
 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 7/96 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           +I + L +LH    R I+++++K  ++L D+D +V ++ D  LA  +  G+T  K     
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNV-RISDLGLAVELKAGQTKTKGYA-- 350

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G  GF+A E +   +Y+   D F+ GV L  ++  +
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 50.0 bits (120), Expect = 1e-08
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+AYLH      IV +++K  ++L+     D   K+ DF L++ +      +K    
Sbjct: 157 ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL-MKTVC- 211

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G  G+ A E +    Y  + D++S G++  +LL G
Sbjct: 212 -GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.8 bits (119), Expect = 1e-08
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +   L ++H       V  ++K  +I+F     +  KL DF L   +   ++ +K     
Sbjct: 264 VCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT-- 317

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           G   F A E           D++S GVL  +LL+G
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 49.3 bits (118), Expect = 2e-08
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 8/97 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI +AL YLH    + +V++++KL +++ D+D H+ K+ DF L  E I DG T       
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHI-KITDFGLCKEGIKDGAT---MKTF 309

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G   ++A E +   DY    D +  GV++  ++ G+
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.1 bits (117), Expect = 2e-08
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           IL  E+ V K+ DF LA  I D E         PI      A E    G +  K DV+SF
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---APEAALYGRFTIKSDVWSF 450

Query: 86  GVLLLVLLT-GQKLY 99
           G+LL  L T G+  Y
Sbjct: 451 GILLTELTTKGRVPY 465

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 15/106 (14%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++IA A+ +LH    + ++ +++K S+I F  D V K+ DF L  ++ D +   +  +  
Sbjct: 171 IQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-DQDEEEQTVLTP 226

Query: 61  GIMGFVATEYVTT-----------GDYNEKCDVFSFGVLLLVLLTG 95
                  T  V T            +Y+ K D+FS G++L  LL  
Sbjct: 227 MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 9/96 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I   + YLH      IV  ++K  +IL          K+ DF ++  I      +++ + 
Sbjct: 140 ILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIM- 194

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E +         D+++ G++  +LLT 
Sbjct: 195 -GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 48.9 bits (117), Expect = 3e-08
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  ++AY H      IV +N+K  ++L     +    KL DF LA  + D E        
Sbjct: 137 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFA- 191

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G  G+++ E +    Y++  D+++ GV+L +LL G
Sbjct: 192 -GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 48.9 bits (117), Expect = 3e-08
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
               L ++H      IV  +IK  +I+    +    K+ DF LA  +   E  +K     
Sbjct: 158 ACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI-VKVTT-- 211

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
               F A E V         D+++ GVL  VLL+G
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 48.8 bits (117), Expect = 3e-08
 Identities = 20/96 (20%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   + Y+H    + ++ +++K S+I   +    K+ DF L  S+ +           G
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKG 183

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            + +++ E +++ DY ++ D+++ G++L  LL    
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 48.8 bits (117), Expect = 4e-08
 Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD---AI 58
           + A  + YL     +  + +++   + L  E +V K+ DF ++    DG          +
Sbjct: 221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV 277

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
           P+      A E +  G Y+ + DV+SFG+LL
Sbjct: 278 PVKWT---APEALNYGRYSSESDVWSFGILL 305

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 47.9 bits (115), Expect = 5e-08
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  ++AY H      IV +N+K  ++L     +    KL DF LA  + D E        
Sbjct: 114 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGFA- 168

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G  G+++ E +    Y++  D+++ GV+L +LL G
Sbjct: 169 -GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 48.2 bits (115), Expect = 6e-08
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           +  A+ YLH      I+ +++K  ++L    +ED + K+ DF  ++ + +    ++    
Sbjct: 248 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLC- 302

Query: 60  IGIMGFVATE---YVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E    V T  YN   D +S GV+L + L+G
Sbjct: 303 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 48.0 bits (115), Expect = 6e-08
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           I N + YLH      I   ++K  +I+           K+ DF LA  I  G    K+  
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIF 178

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
             G   FVA E V       + D++S GV+  +LL+G
Sbjct: 179 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 47.6 bits (114), Expect = 8e-08
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           I + + YLH    + I   ++K  +I+       +   KL DF +A  I  G    K+  
Sbjct: 117 ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIF 172

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
             G   FVA E V       + D++S GV+  +LL+G
Sbjct: 173 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 47.7 bits (114), Expect = 8e-08
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 16/106 (15%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAI- 58
           +A+AL +LH    + I  +++K  +IL    ++    K+ DF L   I         +  
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176

Query: 59  ----PIGIMGFVATE-----YVTTGDYNEKCDVFSFGVLLLVLLTG 95
               P G   ++A E           Y+++CD++S GV+L +LL+G
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 6/75 (8%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           IL  E+ V K+ DF LA  I D E         PI      A E    G +  K DV+SF
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---APEAALYGRFTIKSDVWSF 367

Query: 86  GVLLLVLLT-GQKLY 99
           G+LL  L T G+  Y
Sbjct: 368 GILLTELTTKGRVPY 382

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           I + + YLH    + I   ++K  +I+           KL DF LA  I DG    K+  
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIF 179

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
             G   FVA E V       + D++S GV+  +LL+G
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIPI 60
           +I     YLH      ++ +++KL ++  +ED   K+ DF LA  +  DGE      +  
Sbjct: 149 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLC 202

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           G   ++A E ++   ++ + DV+S G ++  LL G
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 237

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I  AL ++H    R I+ ++IK  +I   +D   +L DF +A  +       +  I  G
Sbjct: 133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI--G 187

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              +++ E      YN K D+++ G +L  L T +
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 21/108 (19%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           I   L  +H    +    +++K ++IL  ++    L D            H++ +     
Sbjct: 143 ICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA---CIHVEGSRQALT 196

Query: 63  MGFVATEYVTTGDY--------------NEKCDVFSFGVLLLVLLTGQ 96
           +   A +   T  Y              +E+ DV+S G +L  ++ G+
Sbjct: 197 LQDWAAQR-CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.8 bits (112), Expect = 2e-07
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +  AL +LH      I   +I+  +I++        K+ +F  A  +  G+   +     
Sbjct: 111 VCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN-FRLLF-- 164

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
               + A E       +   D++S G L+ VLL+G
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 46.9 bits (111), Expect = 2e-07
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 9/97 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EIA  L +L     + I+++++KL +++ D + H+ K+ DF +  E+I DG T       
Sbjct: 450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHI-KIADFGMCKENIWDGVT---TKTF 502

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G   ++A E +    Y +  D ++FGVLL  +L GQ
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           I + + YLH    + I   ++K  +I+           KL DF LA  I DG    K+  
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIF 179

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
             G   FVA E V       + D++S GV+  +LL+G
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 46.2 bits (110), Expect = 3e-07
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 11/99 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           E+  AL YL     + I+ +++K  +IL DE  HV  + DF++A  +P        A   
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHV-HITDFNIAAMLPRETQITTMA--- 175

Query: 61  GIMGFVATEYVTTGD---YNEKCDVFSFGVLLLVLLTGQ 96
           G   ++A E  ++     Y+   D +S GV    LL G+
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIPI 60
           +I     YLH      ++ +++KL ++  +ED   K+ DF LA  +  DGE      +  
Sbjct: 123 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KVLC 176

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           G   ++A E ++   ++ + DV+S G ++  LL G
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG 211

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 45.3 bits (107), Expect = 5e-07
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           ++A  + +L     R  + +++   +IL  E +V K+ DF LA  I     +++     +
Sbjct: 201 QVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLT 94
           P+  M   A E +    Y  + DV+SFGVLL  + +
Sbjct: 258 PLKWM---APETIFDRVYTIQSDVWSFGVLLWEIFS 290

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 45.1 bits (107), Expect = 6e-07
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
            L  E+H+ K+ DF L+  +       H     PI      A E +    ++ K DV++F
Sbjct: 349 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---APESLAYNKFSIKSDVWAF 405

Query: 86  GVLLLVLLT-GQKLY 99
           GVLL  + T G   Y
Sbjct: 406 GVLLWEIATYGMSPY 420

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 45.1 bits (107), Expect = 6e-07
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           I   + ++H      I+  ++K  +IL    +    K+ DF LA      E  +K     
Sbjct: 196 ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-LKVNF-- 249

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
           G   F+A E V     +   D++S GV+  +LL+G
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   + YLH      I+ +++ LS++L   +   K+ DF LA +           +  G
Sbjct: 120 QIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLA-TQLKMPHEKHYTL-CG 174

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
              +++ E  T   +  + DV+S G +   LL G
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIG 208

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 45.2 bits (107), Expect = 7e-07
 Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 18/106 (16%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           +   + +L       IV +NIK  +I+     D   V KL DF  A  + D E       
Sbjct: 121 VVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLY 176

Query: 59  PIGIMGFVATEYVTTGD--------YNEKCDVFSFGVLLLVLLTGQ 96
             G   ++  +              Y    D++S GV      TG 
Sbjct: 177 --GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 44.9 bits (107), Expect = 7e-07
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI +AL YLH    R +V+++IKL +++ D+D H+ K+ DF L  E I DG T       
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGAT----MKT 164

Query: 60  I-GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             G   ++A E +   DY    D +  GV++  ++ G+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.7 bits (106), Expect = 7e-07
 Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 18/106 (16%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           +   + +L       IV +NIK  +I+     D   V KL DF  A  + D E       
Sbjct: 121 VVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE-QFVSLY 176

Query: 59  PIGIMGFVATEYVTTGD--------YNEKCDVFSFGVLLLVLLTGQ 96
             G   ++  +              Y    D++S GV      TG 
Sbjct: 177 --GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 44.7 bits (106), Expect = 9e-07
 Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA--IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           IL     V K+ DF LA  I D E   ++    PI      A E +  G +  K DV+SF
Sbjct: 315 ILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT---APEAINFGSFTIKSDVWSF 371

Query: 86  GVLL 89
           G+LL
Sbjct: 372 GILL 375

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 12/99 (12%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           +  A+ YLH      I+ +++K  ++L    +ED + K+ DF  ++ + +    ++    
Sbjct: 123 MLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLC- 177

Query: 60  IGIMGFVATE---YVTTGDYNEKCDVFSFGVLLLVLLTG 95
            G   ++A E    V T  YN   D +S GV+L + L+G
Sbjct: 178 -GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I       K +  +G
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSTMVG 178

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E VT   Y  K D++S G++ + ++ G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 9/97 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EIA  L +L     + I+++++KL +++ D + H+ K+ DF +  E+I DG T       
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHI-KIADFGMCKENIWDGVT---TKTF 181

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G   ++A E +    Y +  D ++FGVLL  +L GQ
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 44.5 bits (106), Expect = 1e-06
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI   L +LH    + IV++++KL +IL D+D H+ K+ DF +  E++            
Sbjct: 126 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHI-KIADFGMCKENMLGDAK----TNT 177

Query: 60  I-GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             G   ++A E +    YN   D +SFGVLL  +L GQ
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 44.3 bits (105), Expect = 1e-06
 Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  ALAYLH    + ++ ++IK  SIL   D   KL DF     I   +   K    +G
Sbjct: 149 AVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI--SKDVPKRKSLVG 203

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E ++   Y  + D++S G++++ ++ G+
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                L YLH       + ++IK  +IL + +  AKL DF +A  + D  T  K    IG
Sbjct: 133 STLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIG 187

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +    YN   D++S G+  + +  G+
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 11/98 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           E+A AL +LH      I+++++K  +IL DE+ H+ KL DF L+ ESI   +     A  
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHI-KLTDFGLSKESIDHEKK----AYS 185

Query: 60  I-GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             G + ++A E V    + +  D +SFGVL+  +LTG 
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA--IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           IL  +    K+ DF LA  I D E   ++    PI      A E +  G +  K DV+SF
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---APEAINYGTFTIKSDVWSF 196

Query: 86  GVLL 89
           G+LL
Sbjct: 197 GILL 200

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 11/98 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI+ AL +LH    + I+++++K  +I+ +   HV KL DF L  ESI DG         
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHV-KLTDFGLCKESIHDGTV----THT 180

Query: 60  I-GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
             G + ++A E +    +N   D +S G L+  +LTG 
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 43.2 bits (102), Expect = 3e-06
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 25/108 (23%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           E+  A+  +H       V ++IK  +IL D + H+ +L DF    + + DG         
Sbjct: 183 EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHI-RLADFGSCLKLMEDGTVQSSV--- 235

Query: 60  IGIMGFVAT-EYV----------TTGDYNEKCDVFSFGVLLLVLLTGQ 96
                 V T +Y+            G Y  +CD +S GV +  +L G+
Sbjct: 236 -----AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 30/96 (31%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+ YLH      I  +++K  ++L+     + + KL DF  A               
Sbjct: 126 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFA--------------K 168

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTG 95
                       T   Y++ CD++S GV++ +LL G
Sbjct: 169 E----------TTGEKYDKSCDMWSLGVIMYILLCG 194

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 127 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 181

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              ++A E +    Y+ K D++S G+  + L  G+
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L       K+ DF LA+ +   E         +PI  M   A E +    Y  + DV+S
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM---ALESILHRIYTHQSDVWS 204

Query: 85  FGVLL 89
           +GV +
Sbjct: 205 YGVTV 209

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 8/97 (8%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   + YLH    + I+ ++IK S++L  ED   K+ DF ++      +  + + +  G 
Sbjct: 146 LIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV--GT 200

Query: 63  MGFVATEYV--TTGDYN-EKCDVFSFGVLLLVLLTGQ 96
             F+A E +  T   ++ +  DV++ GV L   + GQ
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE-----THIKDAIPIGIMGFVATEYVTTGDYNEKCDV 82
            + DE    K+ DF LA  I D E      H    +P+      A E + T  +  K DV
Sbjct: 155 CMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT---ALESLQTYRFTTKSDV 211

Query: 83  FSFGVLL 89
           +SFGVLL
Sbjct: 212 WSFGVLL 218

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 43.3 bits (102), Expect = 3e-06
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 20/96 (20%)

Query: 2   EIANALAYL------HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--TH 53
           +++ ALAYL      H    R I  +N+     L   +   KL DF L+  + D      
Sbjct: 499 QLSTALAYLESKRFVH----RDIAARNV-----LVSSNDCVKLGDFGLSRYMEDSTYYKA 549

Query: 54  IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
            K  +PI  M   A E +    +    DV+ FGV +
Sbjct: 550 SKGKLPIKWM---APESINFRRFTSASDVWMFGVCM 582

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI+ AL YLH    R I+++++KL ++L D + H+ KL D+ +  E +  G+T    +  
Sbjct: 161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDT---TSTF 213

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G   ++A E +   DY    D ++ GVL+  ++ G+
Sbjct: 214 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 9/97 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI+ AL YLH    R I+++++KL ++L D + H+ KL D+ +  E +  G+T    +  
Sbjct: 118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDT---TSTF 170

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G   ++A E +   DY    D ++ GVL+  ++ G+
Sbjct: 171 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 43.0 bits (102), Expect = 4e-06
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI +AL +LH    + I+++++KL ++L D + H  KL DF +  E I +G T    A  
Sbjct: 132 EIISALMFLH---DKGIIYRDLKLDNVLLDHEGHC-KLADFGMCKEGICNGVT---TATF 184

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            G   ++A E +    Y    D ++ GVLL  +L G 
Sbjct: 185 CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE-----THIKDAIPIGIMGFVATEYVTTGDYNEKCDV 82
            + DE    K+ DF LA  + D E           +P+  M   A E + T  +  K DV
Sbjct: 223 CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM---ALESLQTQKFTTKSDV 279

Query: 83  FSFGVLL 89
           +SFGVLL
Sbjct: 280 WSFGVLL 286

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 42.7 bits (101), Expect = 4e-06
 Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 17/107 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++ +AL ++H    R ++ ++IK +++      V KL D  L        T         
Sbjct: 144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS----- 195

Query: 62  IMGFVAT------EYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSID 102
               V T      E +    YN K D++S G LL  +   Q  +  D
Sbjct: 196 ---LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 6/96 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPI 60
           +I +AL   H         +++K  +IL   D  A L DF +A +  D   T + + +  
Sbjct: 142 QIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-- 196

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G + ++A E  +      + D+++   +L   LTG 
Sbjct: 197 GTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGET---HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
            +  +D    + DF L++ I  G+         +P+  +   A E +    Y  K DV++
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI---AIESLADRVYTSKSDVWA 234

Query: 85  FGVLL 89
           FGV +
Sbjct: 235 FGVTM 239

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGV 87
           +L  ED+VAK+ DF L +     +   K  +P+      A E +    ++ K DV+SFG+
Sbjct: 320 VLVSEDNVAKVSDFGLTKEASSTQDTGK--LPVKWT---APEALREKKFSTKSDVWSFGI 374

Query: 88  LL 89
           LL
Sbjct: 375 LL 376

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIG 61
           +  A+ + H    R +V ++IK  +IL D     AKL DF     + D      D    G
Sbjct: 148 VVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----G 200

Query: 62  IMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
              +   E+++   Y+     V+S G+LL  ++ G
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 42.6 bits (101), Expect = 5e-06
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 19/102 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET-----HI 54
           EIA+AL YLH      IV++++K  +IL D   H+  L DF L  E+I    T       
Sbjct: 147 EIASALGYLH---SLNIVYRDLKPENILLDSQGHI-VLTDFGLCKENIEHNSTTSTFC-- 200

Query: 55  KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
                 G   ++A E +    Y+   D +  G +L  +L G 
Sbjct: 201 ------GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 42.3 bits (100), Expect = 5e-06
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGET---HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
            +  ED    + DF L+  I  G+         +P+  +   A E +    Y    DV++
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL---ALESLADNLYTVHSDVWA 224

Query: 85  FGVLL 89
           FGV +
Sbjct: 225 FGVTM 229

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 9/95 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-AKLFDFSLAESIPDGETHIKDAIPIG 61
           +  A+ + H      ++ ++IK  +IL D +    KL DF     + D      D    G
Sbjct: 158 VLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----G 210

Query: 62  IMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
              +   E++    Y+     V+S G+LL  ++ G
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 42.4 bits (100), Expect = 6e-06
 Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 27/110 (24%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI  A+  +H       V ++IK  +IL D   H+ +L DF    +   DG         
Sbjct: 170 EIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHI-RLADFGSCLKLRADGTVRSLV--- 222

Query: 60  IGIMGFVAT-EY------------VTTGDYNEKCDVFSFGVLLLVLLTGQ 96
                 V T +Y              TG Y  +CD ++ GV    +  GQ
Sbjct: 223 -----AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 42.2 bits (100), Expect = 6e-06
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
            L  E+H+ K+ DF L+  +       H     PI      A E +    ++ K DV++F
Sbjct: 142 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---APESLAYNKFSIKSDVWAF 198

Query: 86  GVLL 89
           GVLL
Sbjct: 199 GVLL 202

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 41.9 bits (99), Expect = 8e-06
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIP 59
           I +A+ Y H    + IV +++K  ++L D D   K+ DF  +     G            
Sbjct: 123 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF------ 173

Query: 60  IGIMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
            G   + A E      Y+  + DV+S GV+L  L++G
Sbjct: 174 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 41.9 bits (99), Expect = 9e-06
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIG 61
              AL + H      I+ +++K ++I+    +  K+ DF +A +I D    + + A  IG
Sbjct: 125 ACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              +++ E       + + DV+S G +L  +LTG+
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
            L  E+ V K+ DF +   + D +  +      P+      + E  +   Y+ K DV+SF
Sbjct: 135 CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA---SPEVFSFSRYSSKSDVWSF 191

Query: 86  GVLL 89
           GVL+
Sbjct: 192 GVLM 195

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 5/64 (7%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
            L ++  V K+ DF L+  + D E  + +    P+        E +    ++ K D+++F
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS---PPEVLMYSKFSSKSDIWAF 207

Query: 86  GVLL 89
           GVL+
Sbjct: 208 GVLM 211

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 8/67 (11%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE-----THIKDAIPIGIMGFVATEYVTTGDYNEKCDV 82
            + DE    K+ DF LA  + D E           +P+  M   A E + T  +  K DV
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM---ALESLQTQKFTTKSDV 215

Query: 83  FSFGVLL 89
           +SFGVLL
Sbjct: 216 WSFGVLL 222

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI +AL YLH    + I+ +++K  +IL +ED H+ ++ DF  A+ +       +    +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHI-QITDFGTAKVLSPESKQARANSFV 193

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G   +V+ E +T     +  D+++ G ++  L+ G 
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 20/96 (20%)

Query: 2   EIANALAYL------HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           ++   +A+L      H    R +  +N      L D D   K+ DF +   + D +    
Sbjct: 112 DVCEGMAFLESHQFIH----RDLAARNC-----LVDRDLCVKVSDFGMTRYVLDDQYVSS 162

Query: 56  DA--IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
                P+      A E      Y+ K DV++FG+L+
Sbjct: 163 VGTKFPVKWS---APEVFHYFKYSSKSDVWAFGILM 195

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 41.4 bits (97), Expect = 1e-05
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 12/107 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  AL Y+H       V +++K S IL   D    L       S+       +  +   
Sbjct: 136 GVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM-ISHGQRQRVVHDF 191

Query: 62  IMGFVATEY--------VTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
               V                 Y+ K D++S G+    L  G   + 
Sbjct: 192 PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 23/95 (24%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + + + H      IV ++IK  +IL D +   K+FDF +A+++    +  +    +G
Sbjct: 119 QILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLG 174

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            + + + E       +E  D++S G++L  +L G+
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L       K+ DF LA+ +   E         +PI  M   A E +    Y  + DV+S
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM---ALESILHRIYTHQSDVWS 204

Query: 85  FGVLL 89
           +GV +
Sbjct: 205 YGVTV 209

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYNEKCDVF 83
           +L + +H  K+ DF L ++I   +           P+      A E +    +    DV+
Sbjct: 157 VLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWY---APECLMQSKFYIASDVW 213

Query: 84  SFGVLL 89
           SFGV L
Sbjct: 214 SFGVTL 219

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIK----DAIPIGIMGFVATEYVTTGDYNEKCDVF 83
           IL + ++  K+ DF L + +P  + + K       PI      A E +T   ++   DV+
Sbjct: 176 ILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY---APESLTESKFSVASDVW 232

Query: 84  SFGVLL 89
           SFGV+L
Sbjct: 233 SFGVVL 238

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 40.9 bits (96), Expect = 2e-05
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 13/97 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIP 59
           + +A+ YL     + I+ ++IK  +I+  ED   KL DF  A  +  G+   T       
Sbjct: 139 LVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTF------ 189

Query: 60  IGIMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
            G + + A E +    Y   + +++S GV L  L+  
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE 226

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIK----DAIPIGIMGFVATEYVTTGDYNEKCDVF 83
           IL + ++  K+ DF L + +P  +   K       PI      A E +T   ++   DV+
Sbjct: 145 ILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY---APESLTESKFSVASDVW 201

Query: 84  SFGVLL 89
           SFGV+L
Sbjct: 202 SFGVVL 207

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 24/107 (22%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           E+  AL  +H       + +++K  ++L D+  H+ KL DF    +   +G         
Sbjct: 176 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHL-KLADFGTCMKMNKEGMVRCDT--- 228

Query: 60  IGIMGFVAT-EYV---------TTGDYNEKCDVFSFGVLLLVLLTGQ 96
                 V T +Y+           G Y  +CD +S GV L  +L G 
Sbjct: 229 -----AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 270

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGV 87
           +L  ED+VAK+ DF L +     +   K  +P+      A E +    ++ K DV+SFG+
Sbjct: 148 VLVSEDNVAKVSDFGLTKEASSTQDTGK--LPVKWT---APEALREKKFSTKSDVWSFGI 202

Query: 88  LL 89
           LL
Sbjct: 203 LL 204

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGET---HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
            L  +  V K+ DF ++  I   +      +  +PI  M     E +    +  + DV+S
Sbjct: 189 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM---PPESILYRKFTTESDVWS 245

Query: 85  FGVLL 89
           FGV+L
Sbjct: 246 FGVVL 250

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 14/99 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF----SLAESIPDGETHIKDA 57
            +   L YL       I+ +++K S+IL +     KL DF     L +S+ +  + +   
Sbjct: 139 AVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFV--- 191

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              G   +++ E +    Y+ + D++S G+ L+ +  G+
Sbjct: 192 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA----IPIGIMGFVATEYVTTGDYNEKCDVF 83
           +L    H AK+ DF L++++   +++         P+      A E +    ++ + DV+
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY---APECINFRKFSSRSDVW 523

Query: 84  SFGVLLLVLLT-GQKLY 99
           S+GV +   L+ GQK Y
Sbjct: 524 SYGVTMWEALSYGQKPY 540

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L       ++ DF +A+ +P  +  +  +    PI  M   A E +  G Y  + DV+S
Sbjct: 146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM---ALESIHFGKYTHQSDVWS 202

Query: 85  FGVLL 89
           +GV +
Sbjct: 203 YGVTV 207

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 18/97 (18%)

Query: 2   EIANALAYL------HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +IA    YL      H    R I  +N  L+        VAK+ DF +A  I     + K
Sbjct: 148 DIACGCQYLEENHFIH----RDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRASYYRK 201

Query: 56  DA---IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
                +P+  M     E    G +  K D +SFGVLL
Sbjct: 202 GGCAMLPVKWM---PPEAFMEGIFTSKTDTWSFGVLL 235

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 18/97 (18%)

Query: 2   EIANALAYL------HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +IA    YL      H    R I  +N  L+        VAK+ DF +A  I     + K
Sbjct: 189 DIACGCQYLEENHFIH----RDIAARNCLLTCP--GPGRVAKIGDFGMARDIYRAGYYRK 242

Query: 56  DA---IPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
                +P+  M     E    G +  K D +SFGVLL
Sbjct: 243 GGCAMLPVKWM---PPEAFMEGIFTSKTDTWSFGVLL 276

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 40.0 bits (94), Expect = 3e-05
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYNEKCDVF 83
           +L D D + K+ DF LA+++P+G            P+      A E +    +    DV+
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY---APECLKEYKFYYASDVW 221

Query: 84  SFGVLL 89
           SFGV L
Sbjct: 222 SFGVTL 227

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 40.1 bits (94), Expect = 4e-05
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           +    L YLH    R I+  ++K  ++L   D   A L DF  A  +             
Sbjct: 158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214

Query: 61  GIMG---FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
            I G    +A E V     + K D++S   ++L +L G 
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYNEKCDVF 83
           IL + +   K+ DF LA+ +P  +           PI      A E ++   ++ + DV+
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY---APESLSDNIFSRQSDVW 214

Query: 84  SFGVLLLVLLT-GQKLYS 100
           SFGV+L  L T   K  S
Sbjct: 215 SFGVVLYELFTYCDKSCS 232

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 39.6 bits (93), Expect = 4e-05
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 23/120 (19%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++   L Y+H      +V  +IK S+I      +         E   D     K    I
Sbjct: 122 LQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASE---EGDEDDWASNKVMFKI 175

Query: 61  GIMGFVAT---EYVTTGD--------------YNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
           G +G V       V  GD              +  K D+F+  + ++     + L    +
Sbjct: 176 GDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD 235

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           IL  E +V K+ DF LA  I     +++     +P+  M   A E +    Y  + DV+S
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM---APETIFDRVYTIQSDVWS 235

Query: 85  FGVLL 89
           FGVLL
Sbjct: 236 FGVLL 240

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGET---HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
            +  ED   K+ DF +   I + +      K  +P+  M   + E +  G +    DV+S
Sbjct: 169 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM---SPESLKDGVFTTYSDVWS 225

Query: 85  FGVLL 89
           FGV+L
Sbjct: 226 FGVVL 230

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           IL     + K+ DF LA  I +   ++      +P+  M   A E +    Y  + DV+S
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWM---APESIFNCVYTFESDVWS 232

Query: 85  FGVLL 89
           +G+ L
Sbjct: 233 YGIFL 237

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 20/96 (20%)

Query: 2   EIANALAYL------HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--TH 53
           +++ ALAYL      H    R I  +N+     L   +   KL DF L+  + D      
Sbjct: 124 QLSTALAYLESKRFVH----RDIAARNV-----LVSSNDCVKLGDFGLSRYMEDSTYYKA 174

Query: 54  IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
            K  +PI  M   A E +    +    DV+ FGV +
Sbjct: 175 SKGKLPIKWM---APESINFRRFTSASDVWMFGVCM 207

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 39.6 bits (93), Expect = 6e-05
 Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 21/106 (19%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF----SLAESIPDGETHIKDA 57
           E+   L YLH       + +++K  +IL  ED   ++ DF     LA         ++  
Sbjct: 129 EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185

Query: 58  IPIGIMGFVAT------EYVTTGD-YNEKCDVFSFGVLLLVLLTGQ 96
                  FV T      E +     Y+ K D++SFG+  + L TG 
Sbjct: 186 -------FVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 39.5 bits (93), Expect = 6e-05
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 20/96 (20%)

Query: 2   EIANALAYL------HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--TH 53
           +I  A+AYL      H    R I  +NI     L       KL DF L+  I D +    
Sbjct: 121 QICKAMAYLESINCVH----RDIAVRNI-----LVASPECVKLGDFGLSRYIEDEDYYKA 171

Query: 54  IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLL 89
               +PI  M   + E +    +    DV+ F V +
Sbjct: 172 SVTRLPIKWM---SPESINFRRFTTASDVWMFAVCM 204

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 39.2 bits (92), Expect = 7e-05
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA----IPIGIMGFVATEYVTTGDYNEKCDVF 83
           +L    H AK+ DF L++++   E + K       P+      A E +    ++ K DV+
Sbjct: 148 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY---APECINYYKFSSKSDVW 204

Query: 84  SFGVLL 89
           SFGVL+
Sbjct: 205 SFGVLM 210

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIK---DAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
            L   + + K+ DF ++  +   + +       +PI  M     E +    +  + DV+S
Sbjct: 164 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM---PPESIMYRKFTTESDVWS 220

Query: 85  FGVLL 89
           FGV+L
Sbjct: 221 FGVIL 225

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGV 87
           IL  E++VAK+ DF L+             +P+  M   A E +    Y    DV+S+GV
Sbjct: 173 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM---AIESLNYSVYTTNSDVWSYGV 229

Query: 88  LL 89
           LL
Sbjct: 230 LL 231

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L  ED+V K+ DF LA  I   + + K     +P+  M   A E +    Y  + DV+S
Sbjct: 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM---APEALFDRIYTHQSDVWS 278

Query: 85  FGVLL 89
           FGVLL
Sbjct: 279 FGVLL 283

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 22/105 (20%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGETHIKDAIP 59
           EI  AL +LH      I++++IKL +IL D + HV  L DF L+ E + D      D   
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHV-VLTDFGLSKEFVADETERAYD--- 219

Query: 60  IGIMGFVAT-EY----VTTGD---YNEKCDVFSFGVLLLVLLTGQ 96
                F  T EY    +  G    +++  D +S GVL+  LLTG 
Sbjct: 220 -----FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L    HVAK+ DF LA  I +   +I      +P+  M   A E +    Y  + DV+S
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM---APESIFDCVYTVQSDVWS 251

Query: 85  FGVLL 89
           +G+LL
Sbjct: 252 YGILL 256

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA----IPIGIMGFVATEYVTTGDYNEKCDVF 83
           +L    H AK+ DF L++++   +++         P+      A E +    ++ + DV+
Sbjct: 141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY---APECINFRKFSSRSDVW 197

Query: 84  SFGVLL 89
           S+GV +
Sbjct: 198 SYGVTM 203

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L     V K+ DF LA  I     ++      +P+  M   A E +  G Y  K DV+S
Sbjct: 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWM---APESLFEGIYTIKSDVWS 259

Query: 85  FGVLL 89
           +G+LL
Sbjct: 260 YGILL 264

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 13/97 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIP 59
           I +A+ Y H      +V +++K  ++L D    AK+ DF L+  + DGE   T       
Sbjct: 120 ILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT------S 170

Query: 60  IGIMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
            G   + A E ++   Y   + D++S GV+L  LL G
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 24/104 (23%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                LAYLH      ++ +++K  +IL  E  + KL DF  A  +    +         
Sbjct: 162 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS--------- 209

Query: 62  IMGFVATEY---------VTTGDYNEKCDVFSFGVLLLVLLTGQ 96
              FV T Y         +  G Y+ K DV+S G+  + L   +
Sbjct: 210 ---FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYNEKCDVF 83
           IL + + V K+ DF L   + D      T     IPI      + E +    +    DV+
Sbjct: 178 ILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT---SPEAIAYRKFTSASDVW 234

Query: 84  SFGVLL 89
           S+G++L
Sbjct: 235 SYGIVL 240

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 20/96 (20%), Positives = 45/96 (46%), Gaps = 10/96 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           +I     YLH      ++++++K  ++L D+  ++ ++ DF  A+ +      +      
Sbjct: 149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYI-QVTDFGFAKRVKGRTWTL-----C 199

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
           G    +A E + +  YN+  D ++ GVL+  +  G 
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA----IPIGIMGFVATEYVTTGDYNEKCDVF 83
           +L D + V K+ DF L+  + D            IPI      A E +    ++   DV+
Sbjct: 182 VLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT---APEAIAFRTFSSASDVW 238

Query: 84  SFGVLL 89
           SFGV++
Sbjct: 239 SFGVVM 244

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE---THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L  +    K+ D  L   +   +         +PI  M   A E +  G ++   D++S
Sbjct: 159 VLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM---APEAIMYGKFSIDSDIWS 215

Query: 85  FGVLL 89
           +GV+L
Sbjct: 216 YGVVL 220

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L  E++V K+ DF LA  I + + + K     +P+  M   A E +    Y  + DV+S
Sbjct: 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM---APEALFDRVYTHQSDVWS 244

Query: 85  FGVLL 89
           FGVL+
Sbjct: 245 FGVLM 249

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 13/97 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIP 59
           I  A+ Y H      IV +++K  ++L D++   K+ DF L+  + DG    T       
Sbjct: 117 IICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT------S 167

Query: 60  IGIMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
            G   + A E +    Y   + DV+S G++L V+L G
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVG 204

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA----IPIGIMGFVATEYVTTGDYNEKCDVF 83
           IL + + V K+ DF L+  + D            IPI      A E ++   +    DV+
Sbjct: 178 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT---APEAISYRKFTSASDVW 234

Query: 84  SFGVLL 89
           SFG+++
Sbjct: 235 SFGIVM 240

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIK---DAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
           +L  E++V K+ DF LA  I + + + K     +P+  M   A E +    Y  + DV+S
Sbjct: 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM---APEALFDRVYTHQSDVWS 290

Query: 85  FGVLL 89
           FGVL+
Sbjct: 291 FGVLM 295

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 11/68 (16%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE------THIKDAIPIGIMGFVATEYVTTGDYNEKCD 81
           +L     + K+ DF L  ++P  +       H K  +P       A E + T  ++   D
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK--VPFAWC---APESLKTRTFSHASD 206

Query: 82  VFSFGVLL 89
            + FGV L
Sbjct: 207 TWMFGVTL 214

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L++LH      ++ ++IK  ++L  E+   KL DF ++  +    T  +    IG
Sbjct: 137 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIG 191

Query: 62  I---MG--FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
               M    +A +      Y+ K D++S G+  + +  G 
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 5/95 (5%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           + + L YLH    + IV K+IK  ++L       K+    +AE++             G 
Sbjct: 118 LIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGS 174

Query: 63  MGFVATEYVTTGD-YN-EKCDVFSFGVLLLVLLTG 95
             F   E     D ++  K D++S GV L  + TG
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFS 84
           IL  E    K+ DF L+  + + ++++K +   IP+  M   A E +    Y  + DV+S
Sbjct: 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWM---AIESLFDHIYTTQSDVWS 237

Query: 85  FGVLL 89
           FGVLL
Sbjct: 238 FGVLL 242

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 36.3 bits (84), Expect = 9e-04
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 13/97 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIP 59
           I + + Y H      +V +++K  ++L D    AK+ DF L+  + DGE   T       
Sbjct: 125 ILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT------S 175

Query: 60  IGIMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTG 95
            G   + A E ++   Y   + D++S GV+L  LL G
Sbjct: 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	110
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.97
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.95
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.95
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.95
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.95
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.95
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.95
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.95
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
3niz_A	311	Rhodanese family protein; structural genomics, str	99.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.94
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.94
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.94
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.94
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.94
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.94
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.94
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.94
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.94
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.94
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.94
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.94
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.94
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.94
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.94
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.94
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.94
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.94
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.94
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.94
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.94
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.94
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.94
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.94
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.94
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.93
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.93
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.93
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.93
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.93
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.93
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.93
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.93
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.93
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.93
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.93
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.93
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.93
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.93
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.93
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.93
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.93
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.93
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.93
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.93
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.93
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.93
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.93
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.93
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.93
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.93
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.93
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.92
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.92
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.92
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.92
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.92
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.92
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.92
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.92
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.92
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.92
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.92
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.92
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.92
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.92
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.92
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.92
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.92
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.92
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.92
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.92
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.92
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.92
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.92
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.92
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.92
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.92
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.92
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.92
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.92
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.92
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.92
3bhy_A	283	Death-associated protein kinase 3; death associate	99.92
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.92
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.92
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.91
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.91
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.91
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.91
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.91
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.91
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.91
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.91
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.91
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.91
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.91
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.91
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.91
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.91
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.91
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.91
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.91
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.91
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.91
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.9
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.9
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.9
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.9
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.9
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.9
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.9
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.9
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.9
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.9
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.89
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.89
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.89
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.87
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.86
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.85
3uqc_A	286	Probable conserved transmembrane protein; structur	99.81
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.7
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.45
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.19
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.75
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.85
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.69
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.61
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.39
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.78
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.55
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.38
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.19
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	96.11
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.07
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.04
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.97
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	95.9
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.38
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.21
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	95.1
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	94.89
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	94.88
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	94.41
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	94.33
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	93.73
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.54
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.35
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.07
3mes_A	424	Choline kinase; malaria, structural genomics, stru	91.52
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	90.94
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	89.32
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	81.18

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.9e-36  Score=188.79  Aligned_cols=101  Identities=25%  Similarity=0.481  Sum_probs=89.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|||   +++|+||||||+||+++.++.+|++|||+++..............+||+.|||||++.+..++.++|
T Consensus       140 qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D  216 (311)
T 4aw0_A          140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD  216 (311)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999998765444333444557999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|+|++|+.||.+.+..
T Consensus       217 iWSlGvilyeml~G~~PF~~~~~~  240 (311)
T 4aw0_A          217 LWALGCIIYQLVAGLPPFRAGNEG  240 (311)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999877643

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.5e-35  Score=187.43  Aligned_cols=99  Identities=23%  Similarity=0.430  Sum_probs=87.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|||   +++|+||||||+|||++.++.+|++|||+++.........  ....||+.|||||++....++.++|
T Consensus       178 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~D  252 (346)
T 4fih_A          178 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVD  252 (346)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc--cccccCcCcCCHHHHCCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999998765433222  2347999999999999899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|||++|+.||.+.+..
T Consensus       253 iWSlGvilyeml~G~~PF~~~~~~  276 (346)
T 4fih_A          253 IWSLGIMVIEMVDGEPPYFNEPPL  276 (346)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCcCHH
Confidence            999999999999999999877643

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-35  Score=185.63  Aligned_cols=100  Identities=27%  Similarity=0.459  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc---CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~   78 (110)
                      ||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++...............||+.|||||++..   ..++.
T Consensus       140 qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~  216 (307)
T 3omv_A          140 QTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF  216 (307)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCH
T ss_pred             HHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCc
Confidence            7899999999   78999999999999999999999999999986554333333334479999999999864   35889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||||+++||+++|+.||.+.+.
T Consensus       217 ksDVwS~Gvvl~Elltg~~Pf~~~~~  242 (307)
T 3omv_A          217 QSDVYSYGIVLYELMTGELPYSHINN  242 (307)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             HHHhHhHHHHHHHHHHCCCCCCCCCh
Confidence            99999999999999999999987654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.8e-35  Score=184.64  Aligned_cols=100  Identities=32%  Similarity=0.477  Sum_probs=85.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +++|+||||||+||+++.++.+|++|||+++........  .....||+.|||||++.+..++.++|
T Consensus       134 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAPE~~~~~~y~~~~D  208 (304)
T 3ubd_A          134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVVNRRGHTQSAD  208 (304)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CC--CCSCCCCGGGCCHHHHHTSCCCTHHH
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCcc--ccccccCcccCCHHHhccCCCCCCCc
Confidence            7899999999   899999999999999999999999999999765332221  22347999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +||+||++|||++|+.||.+.+..+
T Consensus       209 iwSlGvilyemltG~~PF~~~~~~~  233 (304)
T 3ubd_A          209 WWSFGVLMFEMLTGTLPFQGKDRKE  233 (304)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ccchHHHHHHHHhCCCCCCCcCHHH
Confidence            9999999999999999998876543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.5e-34  Score=183.31  Aligned_cols=102  Identities=25%  Similarity=0.342  Sum_probs=84.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcc---eecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETH---IKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      ||+.||.|||   +++|+||||||+|||++.++ .+||+|||+++........   .......||+.|||||++.+..++
T Consensus       158 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~  234 (336)
T 4g3f_A          158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD  234 (336)
T ss_dssp             HHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCC
Confidence            7899999999   89999999999999999887 6999999999866432211   112234699999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      .++|+||+||++|||++|+.||.+.+..+
T Consensus       235 ~~~DiwSlGvilyemltG~~Pf~~~~~~~  263 (336)
T 4g3f_A          235 AKVDIWSSCCMMLHMLNGCHPWTQYFRGP  263 (336)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred             cHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence            99999999999999999999998776544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=188.14  Aligned_cols=99  Identities=23%  Similarity=0.430  Sum_probs=87.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.........  ....||+.|||||++.+..++.++|
T Consensus       255 qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~D  329 (423)
T 4fie_A          255 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVD  329 (423)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB--CCCEECTTTCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc--cccccCcCcCCHHHHCCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999998765433222  2347999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|||++|+.||.+.+..
T Consensus       330 iWSlGvilyeml~G~~PF~~~~~~  353 (423)
T 4fie_A          330 IWSLGIMVIEMVDGEPPYFNEPPL  353 (423)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCcCHH
Confidence            999999999999999999876543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.2e-35  Score=187.91  Aligned_cols=100  Identities=25%  Similarity=0.393  Sum_probs=86.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +++|+||||||.|||++.++.+||+|||+++.......  ......||+.|||||++.+..++.++|
T Consensus       133 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~~~~~~GT~~YmAPE~l~~~~y~~~~D  207 (350)
T 4b9d_A          133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSD  207 (350)
T ss_dssp             HHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH--HHHHHHSCCTTCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc--cccccCCCccccCHHHHCCCCCCcHHH
Confidence            7899999999   89999999999999999999999999999976543211  112336999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +||+||++|||++|+.||.+.+..+
T Consensus       208 iwSlGvilyemltG~~PF~~~~~~~  232 (350)
T 4b9d_A          208 IWALGCVLYELCTLKHAFEAGSMKN  232 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCcCHHH
Confidence            9999999999999999998876543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1e-34  Score=185.28  Aligned_cols=100  Identities=26%  Similarity=0.443  Sum_probs=88.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++...............|++.|||||++....++.++|
T Consensus       193 qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksD  269 (353)
T 4ase_A          193 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  269 (353)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHhHh---hCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCccc
Confidence            7899999999   7999999999999999999999999999998765554444444556889999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+.+.
T Consensus       270 VwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          270 VWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             EeehHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 9999987654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7.4e-35  Score=183.20  Aligned_cols=102  Identities=21%  Similarity=0.343  Sum_probs=87.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|||   +.+++||||||+||+++.++.+|++|||+++...............|++.|||||++....++.++|
T Consensus       153 qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksD  229 (308)
T 4gt4_A          153 QIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD  229 (308)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccch
Confidence            7899999999   7899999999999999999999999999997654333222233346889999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      +||||+++||+++ |..||.+.+..+
T Consensus       230 VwSfGvvl~El~t~g~~Pf~~~~~~~  255 (308)
T 4gt4_A          230 IWSYGVVLWEVFSYGLQPYCGYSNQD  255 (308)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred             hhhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999998 899998776543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=4.3e-35  Score=183.62  Aligned_cols=101  Identities=19%  Similarity=0.346  Sum_probs=87.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +++++||||||+||+++.++.+|++|||+++...............|++.|||||++....++.++|
T Consensus       136 qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~D  212 (299)
T 4asz_A          136 QIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  212 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhh
Confidence            7899999999   7899999999999999999999999999998655443333333346889999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+++ |+.||.+.+..
T Consensus       213 VwS~Gvvl~Ellt~G~~Pf~~~~~~  237 (299)
T 4asz_A          213 VWSLGVVLWEIFTYGKQPWYQLSNN  237 (299)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            9999999999998 89999876544

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.8e-33  Score=175.53  Aligned_cols=95  Identities=28%  Similarity=0.447  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      ||+.||+|||   +++  |+||||||.|||++. ++.+||+|||+++......    .....||+.|||||++. ..++.
T Consensus       137 qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~----~~~~~GTp~YmAPE~~~-~~y~~  208 (290)
T 3fpq_A          137 QILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF----AKAVIGTPEFMAPEMYE-EKYDE  208 (290)
T ss_dssp             HHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS----BEESCSSCCCCCGGGGG-TCCCT
T ss_pred             HHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc----cCCcccCccccCHHHcC-CCCCc
Confidence            7899999999   666  999999999999974 7899999999997543322    12347999999999886 46899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+||++|||++|+.||.+.+.
T Consensus       209 ~~DiwSlGvilyelltg~~Pf~~~~~  234 (290)
T 3fpq_A          209 SVDVYAFGMCMLEMATSEYPYSECQN  234 (290)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCc
Confidence            99999999999999999999976543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.7e-34  Score=182.02  Aligned_cols=101  Identities=20%  Similarity=0.328  Sum_probs=79.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+|+||||||+||+++.++.+||+|||+++...............|++.|||||++....++.++|
T Consensus       166 qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sD  242 (329)
T 4aoj_A          166 QVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD  242 (329)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHh---cCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcccc
Confidence            7899999999   7899999999999999999999999999998664433333333346899999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+++ |+.||.+.+..
T Consensus       243 vwS~Gvvl~Ellt~G~~Pf~~~~~~  267 (329)
T 4aoj_A          243 VWSFGVVLWEIFTYGKQPWYQLSNT  267 (329)
T ss_dssp             HHHHHHHHHHHHTTSCCTTCSSCHH
T ss_pred             ccchHHHHHHHHcCCCCCCCCCCHH
Confidence            9999999999998 89999876543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1e-33  Score=175.55  Aligned_cols=97  Identities=29%  Similarity=0.478  Sum_probs=77.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|++|||   +++|+||||||+||+++.++.+|++|||+++.......   .....||+.|||||++.+..+ +.++
T Consensus       120 qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~---~~~~~GT~~Y~APE~~~~~~y~~~~~  193 (275)
T 3hyh_A          120 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSCGSPNYAAPEVISGKLYAGPEV  193 (275)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHH
T ss_pred             HHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc---cCCeeECcccCChhhhcCCCCCCChh
Confidence            7899999999   89999999999999999999999999999976543221   123479999999999988876 5789


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+||++|+|++|+.||.+.+.
T Consensus       194 DiwSlGvily~lltg~~PF~~~~~  217 (275)
T 3hyh_A          194 DVWSCGVILYVMLCRRLPFDDESI  217 (275)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhHHHHHHHHHHHHCCCCCCCCCH
Confidence            999999999999999999987654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.97  E-value=3.2e-32  Score=184.28  Aligned_cols=98  Identities=29%  Similarity=0.516  Sum_probs=85.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      ||+.||.|||   +.+|+||||||.|||++.++.+||+|||+++.......    ...+||+.|||||++.. ..++.++
T Consensus       300 qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~v  372 (689)
T 3v5w_A          300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSA  372 (689)
T ss_dssp             HHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHH
T ss_pred             HHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC----CCccCCcCccCHHHHhCCCCCCcHH
Confidence            7899999999   89999999999999999999999999999987654332    23479999999999964 5789999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      |+||+||++|||++|..||.+.+..+
T Consensus       373 DiWSLGvilYEmLtG~~PF~~~~~~~  398 (689)
T 3v5w_A          373 DWFSLGCMLFKLLRGHSPFRQHKTKD  398 (689)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            99999999999999999998765443

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=2.3e-32  Score=171.61  Aligned_cols=102  Identities=20%  Similarity=0.317  Sum_probs=78.6

Q ss_pred             cHHHHHHHHhcC-----CCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccC
Q 043407            2 EIANALAYLHVG-----FPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~-----~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.||+|||+.     ...+|+||||||+|||++.++.+|++|||+++.........  ......||+.|||||++.+.
T Consensus       108 ~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~  187 (303)
T 3hmm_A          108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  187 (303)
T ss_dssp             HHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhccc
Confidence            789999999932     11389999999999999999999999999997654332221  12234699999999998654


Q ss_pred             ------CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           75 ------DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        75 ------~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                            .++.++|+||||+++||+++|..||...+
T Consensus       188 ~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~  222 (303)
T 3hmm_A          188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE  222 (303)
T ss_dssp             SCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCC
T ss_pred             ccccCCccChhHhhhhHHHHHHHHHHCCCCCCccc
Confidence                  25678999999999999999987765443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=2.9e-32  Score=176.38  Aligned_cols=102  Identities=19%  Similarity=0.329  Sum_probs=84.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC--cceecccccccccccccceeccCC-CCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGD-YNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~-~~~   78 (110)
                      ||+.||.|||   +.+|+||||||.||+++.++.+|++|||+++......  .........||+.|+|||++.+.. ++.
T Consensus       166 qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~  242 (398)
T 4b99_A          166 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ  242 (398)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCT
T ss_pred             HHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCC
Confidence            7899999999   8999999999999999999999999999998654321  112223447999999999987754 689


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      ++|+||+||++|||++|+.||.+.+..+
T Consensus       243 ~~DiWSlG~il~ell~G~~pF~g~~~~~  270 (398)
T 4b99_A          243 AIDLWSVGCIFGEMLARRQLFPGKNYVH  270 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTSCSSCCSSHHH
T ss_pred             hhheehhHHHHHHHHHCCCCCCCCCHHH
Confidence            9999999999999999999998876543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=5.6e-32  Score=169.59  Aligned_cols=94  Identities=30%  Similarity=0.564  Sum_probs=73.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce----------eccccccccccccccee
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----------KDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~   71 (110)
                      ||++||+|||   +++|+||||||.||+++.++.+|++|||+++.........          ......||+.|||||++
T Consensus       126 qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~  202 (299)
T 4g31_A          126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI  202 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHH
T ss_pred             HHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHH
Confidence            7899999999   7999999999999999999999999999997654322111          11234699999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           72 TTGDYNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        72 ~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .+..++.++|+||+||++|||++   ||.+
T Consensus       203 ~~~~y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          203 HGNSYSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             cCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence            99999999999999999999995   6654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=2.5e-31  Score=170.26  Aligned_cols=98  Identities=30%  Similarity=0.414  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcc--------------------------e
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETH--------------------------I   54 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~--------------------------~   54 (110)
                      |++.|++|||   +.+|+||||||+||+++.+ +.+|++|||+++........                          .
T Consensus       125 qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (361)
T 4f9c_A          125 NLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQ  201 (361)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC----------------------
T ss_pred             HHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccc
Confidence            7899999999   8999999999999999876 79999999999754322110                          0


Q ss_pred             ecccccccccccccceeccCC-CCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           55 KDAIPIGIMGFVATEYVTTGD-YNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        55 ~~~~~~~~~~~~~pe~~~~~~-~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ......||+.|+|||++.+.. ++.++|+||+||++|||++|+.||...
T Consensus       202 ~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          202 QVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             ----CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             cccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            112236999999999998764 789999999999999999999998543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=5.2e-30  Score=172.03  Aligned_cols=98  Identities=23%  Similarity=0.397  Sum_probs=85.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC--CceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      ||+.||.|||   +++|+||||||.||+++.+  +.+|++|||+++........   ....||+.|+|||++.+..++.+
T Consensus       263 qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~---~~~~GT~~y~APEv~~~~~y~~~  336 (573)
T 3uto_A          263 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV---KVTTGTAEFAAPEVAEGKPVGYY  336 (573)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE---EEECSSGGGCCHHHHTTCCBCHH
T ss_pred             HHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce---eeeEECccccCHHHhCCCCCCcH
Confidence            7899999999   8999999999999999854  78999999999876543222   23369999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+||++|+|++|..||.+.+..
T Consensus       337 ~DiWSlGvilyeml~G~~Pf~~~~~~  362 (573)
T 3uto_A          337 TDMWSVGVLSYILLSGLSPFGGENDD  362 (573)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence            99999999999999999999877654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=161.56  Aligned_cols=98  Identities=14%  Similarity=0.186  Sum_probs=84.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-----------CCceEEecccccccCCCCCcceecccccccccccccce
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-----------DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEY   70 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-----------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~   70 (110)
                      |++.||+|||   +.+++||||||+||+++.           ++.++++|||+++...............|++.|+|||+
T Consensus       180 qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~  256 (365)
T 3e7e_A          180 RMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM  256 (365)
T ss_dssp             HHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHH
T ss_pred             HHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHH
Confidence            7899999999   899999999999999988           89999999999975432222233334468999999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           71 VTTGDYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        71 ~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +.+..++.++|+||+|+++||+++|+.||...
T Consensus       257 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~  288 (365)
T 3e7e_A          257 LSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             HTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred             hcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence            99988999999999999999999999998654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.95  E-value=1.2e-28  Score=159.44  Aligned_cols=96  Identities=28%  Similarity=0.522  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.++++|||+++.......  ......|++.|+|||++.+..++.++|
T Consensus       161 qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~--~~~~~~gt~~Y~aPE~l~~~~~~~~~D  235 (396)
T 4dc2_A          161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVD  235 (396)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCBCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCC--ccccccCCcccCCchhhcCCCCChHHH
Confidence            7899999999   78999999999999999999999999999875332222  122346899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||+|+++||+++|..||...
T Consensus       236 iwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          236 WWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             HHHHHHHHHHHHHSSCSSTTT
T ss_pred             HHHHHHHHHHHHhCCCCCccc
Confidence            999999999999999999654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.95  E-value=2.4e-29  Score=160.62  Aligned_cols=99  Identities=27%  Similarity=0.480  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++.......  ......|++.|+|||++.+..++.++|
T Consensus       132 qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  206 (353)
T 3txo_A          132 EIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV--TTATFCGTPDYIAPEILQEMLYGPAVD  206 (353)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHH
T ss_pred             HHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccCCc--cccccCCCcCeEChhhcCCCCcCCccC
Confidence            7899999999   78999999999999999999999999999875432222  122336899999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++||+++|..||.+.+..
T Consensus       207 iwslG~il~ell~G~~Pf~~~~~~  230 (353)
T 3txo_A          207 WWAMGVLLYEMLCGHAPFEAENED  230 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             CCcchHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999877654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=5.1e-29  Score=162.88  Aligned_cols=100  Identities=24%  Similarity=0.440  Sum_probs=84.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.+|++|||+++......... .....|++.|+|||++.     ...+
T Consensus       183 qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~~  258 (437)
T 4aw2_A          183 EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYISPEILQAMEGGKGRY  258 (437)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEE-CCSCCSCGGGCCHHHHHHHHTSCCEE
T ss_pred             HHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcc-cccccCCcCeeChHHHhhcccCCCCC
Confidence            7889999999   7999999999999999999999999999997664433222 22336899999999987     4568


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +.++|+||+|+++||+++|+.||.+.+..
T Consensus       259 ~~~~DvwSlGvil~elltG~~Pf~~~~~~  287 (437)
T 4aw2_A          259 GPECDWWSLGVCMYEMLYGETPFYAESLV  287 (437)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             CCcCeeHHHHHHHHHHHhCCCCCCCCChh
Confidence            89999999999999999999999876643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.95  E-value=2e-28  Score=155.60  Aligned_cols=98  Identities=28%  Similarity=0.506  Sum_probs=84.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.++++|||+++........  .....|++.|+|||++.+..++.++|
T Consensus       113 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  187 (337)
T 1o6l_A          113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  187 (337)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC--BCCCEECGGGCCGGGGSSSCBCTTHH
T ss_pred             HHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc--ccccccChhhCChhhhcCCCCCchhh
Confidence            7899999999   789999999999999999999999999998754322211  22336899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       188 iwslG~il~ell~g~~Pf~~~~~  210 (337)
T 1o6l_A          188 WWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cccchhHHHHHhcCCCCCCCCCH
Confidence            99999999999999999976654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.95  E-value=1.1e-28  Score=157.58  Aligned_cols=98  Identities=26%  Similarity=0.482  Sum_probs=84.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||+++.......  ......|++.|+|||++....++.++|
T Consensus       129 qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  203 (353)
T 2i0e_A          129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVD  203 (353)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC--CBCCCCSCGGGCCHHHHTTCCBSTHHH
T ss_pred             HHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCc--ccccccCCccccChhhhcCCCcCCccc
Confidence            7899999999   78999999999999999999999999999875432221  122336899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       204 iwslG~il~ell~G~~Pf~~~~~  226 (353)
T 2i0e_A          204 WWAFGVLLYEMLAGQAPFEGEDE  226 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccchHHHHHHHHcCCCCCCCCCH
Confidence            99999999999999999987654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=1.2e-28  Score=167.90  Aligned_cols=99  Identities=25%  Similarity=0.476  Sum_probs=86.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+|+||||||+||+++.++.++|+|||+++........  .....|++.|+|||++....++.++|
T Consensus       450 qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~D  524 (674)
T 3pfq_A          450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVD  524 (674)
T ss_dssp             HHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC--BCCCCSCSSSCCHHHHTCCCBSTHHH
T ss_pred             HHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc--cccccCCCcccCHhhhcCCCCCccce
Confidence            7899999999   789999999999999999999999999999764332222  22346899999999999899999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|||++|..||.+.+..
T Consensus       525 vwSlGvilyelltG~~Pf~~~~~~  548 (674)
T 3pfq_A          525 WWAFGVLLYEMLAGQAPFEGEDED  548 (674)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EechHHHHHHHHcCCCCCCCCCHH
Confidence            999999999999999999877653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.95  E-value=1.6e-28  Score=156.45  Aligned_cols=98  Identities=33%  Similarity=0.553  Sum_probs=84.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++........  .....|++.|+|||++.+..++.++|
T Consensus       126 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  200 (345)
T 1xjd_A          126 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPEILLGQKYNHSVD  200 (345)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc--ccCCCCCcccCChhhhcCCCCCChhh
Confidence            7899999999   789999999999999999999999999998754322211  22346899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       201 iwslG~il~ell~g~~Pf~~~~~  223 (345)
T 1xjd_A          201 WWSFGVLLYEMLIGQSPFHGQDE  223 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hHHHHHHHHHHhcCCCCCCCCCH
Confidence            99999999999999999987654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.95  E-value=8.3e-29  Score=160.82  Aligned_cols=100  Identities=23%  Similarity=0.430  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC----CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~----~~   77 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++........ ......|++.|+|||++....    ++
T Consensus       176 qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~~  251 (410)
T 3v8s_A          176 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAVGTPDYISPEVLKSQGGDGYYG  251 (410)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE-ECCSCCSCGGGCCHHHHHTTTTTCEEE
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc-cccCCcCCccccCHHHhhccCCCcCCC
Confidence            7899999999   799999999999999999999999999999766543221 222346999999999997665    67


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .++|+||+|+++||+++|..||.+.+..
T Consensus       252 ~~~DiwSlGvilyell~G~~Pf~~~~~~  279 (410)
T 3v8s_A          252 RECDWWSVGVFLYEMLVGDTPFYADSLV  279 (410)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             CcceEecchHHHHHHHhCCCCCCCCChh
Confidence            8999999999999999999999876543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=1.8e-28  Score=157.93  Aligned_cols=101  Identities=21%  Similarity=0.347  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC-------------------cceeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-------------------THIKDAIPIGI   62 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------~~~~~~~~~~~   62 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||+++......                   .........++
T Consensus       117 qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  193 (388)
T 3oz6_A          117 QLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT  193 (388)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCG
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCccc
Confidence            7899999999   7899999999999999999999999999987643211                   01111223688


Q ss_pred             ccccccceecc-CCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           63 MGFVATEYVTT-GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        63 ~~~~~pe~~~~-~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +.|+|||++.+ ..++.++|+||+||+++|+++|..||.+.+..
T Consensus       194 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~  237 (388)
T 3oz6_A          194 RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM  237 (388)
T ss_dssp             GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             CCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999876 56899999999999999999999999877643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=1.9e-28  Score=157.52  Aligned_cols=99  Identities=27%  Similarity=0.447  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++.......  ......|++.|+|||++.+..++.++|
T Consensus       147 qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  221 (373)
T 2r5t_A          147 EIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVLHKQPYDRTVD  221 (373)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC--CCCSBSCCCCCCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCC--ccccccCCccccCHHHhCCCCCCchhh
Confidence            7899999999   79999999999999999999999999999875332221  122336899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++||+++|..||.+.+..
T Consensus       222 iwslG~il~ell~G~~Pf~~~~~~  245 (373)
T 2r5t_A          222 WWCLGAVLYEMLYGLPPFYSRNTA  245 (373)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSBHH
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCHH
Confidence            999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=4e-28  Score=155.70  Aligned_cols=101  Identities=26%  Similarity=0.394  Sum_probs=85.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||+++...............+++.|+|||.+.+..++.++|
T Consensus       211 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  287 (370)
T 2psq_A          211 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  287 (370)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHH
Confidence            7899999999   7999999999999999999999999999998655433322223335677899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|+++||+++ |..||.+.+..
T Consensus       288 vwslG~il~ellt~g~~p~~~~~~~  312 (370)
T 2psq_A          288 VWSFGVLMWEIFTLGGSPYPGIPVE  312 (370)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            9999999999999 99999876543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.8e-28  Score=159.36  Aligned_cols=100  Identities=26%  Similarity=0.460  Sum_probs=84.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-------cC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-------TG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-------~~   74 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++........ ......|++.|+|||++.       ..
T Consensus       170 qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~~~~~~  245 (412)
T 2vd5_A          170 EIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV-RSLVAVGTPDYLSPEILQAVGGGPGTG  245 (412)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE-ECSSCCSCGGGCCHHHHHHHHTCTTCS
T ss_pred             HHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc-ccceeccccCcCCHHHHhhcccCcCCC
Confidence            7889999999   799999999999999999999999999999776543322 222346899999999987       34


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .++.++|+||+|+++||+++|+.||.+.+..
T Consensus       246 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~  276 (412)
T 2vd5_A          246 SYGPECDWWALGVFAYEMFYGQTPFYADSTA  276 (412)
T ss_dssp             EECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             CCChHHhhhHHhHHHHHHHhCCCCCCCCCHH
Confidence            5789999999999999999999999876543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.95  E-value=6.7e-28  Score=152.14  Aligned_cols=95  Identities=33%  Similarity=0.587  Sum_probs=84.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++......     ....|++.|+|||++....++.++|
T Consensus       114 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  185 (318)
T 1fot_A          114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPYNKSID  185 (318)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB-----CCCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCcc-----ccccCCccccCHhHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999987654322     2236889999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       186 iwslG~il~ell~g~~pf~~~~~  208 (318)
T 1fot_A          186 WWSFGILIYEMLAGYTPFYDSNT  208 (318)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=2.3e-28  Score=156.66  Aligned_cols=95  Identities=9%  Similarity=0.141  Sum_probs=82.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc--CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~   79 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++.......     ...+++.|+|||.+..  ..++.+
T Consensus       202 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          202 QLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-----ASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             HHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-----GGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             HHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-----CccCCcCCcChhhccCCCCCcCcc
Confidence            7899999999   79999999999999999999999999999876532211     2245689999999977  668999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|+++|++++|+.||.+...
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~  298 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTP  298 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCc
Confidence            9999999999999999999987743

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.95  E-value=5e-28  Score=151.26  Aligned_cols=98  Identities=28%  Similarity=0.510  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....+++.|+|||.+.+..++.++|
T Consensus       124 qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  198 (297)
T 3fxz_A          124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  198 (297)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHHHCSCBCTHHH
T ss_pred             HHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc--cCCccCCcCccChhhhcCCCCCcHHH
Confidence            6889999999   789999999999999999999999999998765443322  22336889999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       199 iwslG~il~ell~g~~pf~~~~~  221 (297)
T 3fxz_A          199 IWSLGIMAIEMIEGEPPYLNENP  221 (297)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999977654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.95  E-value=5.4e-28  Score=152.57  Aligned_cols=100  Identities=24%  Similarity=0.446  Sum_probs=84.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++...............++..|+|||.+....++.++|
T Consensus       123 qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (325)
T 3kex_A          123 QIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSD  199 (325)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhH
Confidence            7899999999   7899999999999999999999999999998765443333333335777899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.+.+.
T Consensus       200 i~slG~~l~el~~~g~~p~~~~~~  223 (325)
T 3kex_A          200 VWSYGVTVWELMTFGAEPYAGLRL  223 (325)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTSCT
T ss_pred             hHHhHHHHHHHHhCCCCCccccCH
Confidence            9999999999999 9999987654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.95  E-value=7.9e-28  Score=153.21  Aligned_cols=95  Identities=28%  Similarity=0.538  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||+++.......  ......|++.|+|||++.+..++.++|
T Consensus       118 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  192 (345)
T 3a8x_A          118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVD  192 (345)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC--cccccCCCccccCccccCCCCCChHHh
Confidence            7899999999   78999999999999999999999999999875432221  122336899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +||+|+++||+++|..||..
T Consensus       193 iwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          193 WWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             HHHHHHHHHHHHHSSCTTTT
T ss_pred             HHHHHHHHHHHHhCCCCcCC
Confidence            99999999999999999965

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.95  E-value=5.8e-28  Score=154.12  Aligned_cols=95  Identities=22%  Similarity=0.437  Sum_probs=84.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||+++......     ....|++.|+|||++.+..++.++|
T Consensus       149 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  220 (350)
T 1rdq_E          149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCC
Confidence            7899999999   7999999999999999999999999999987654322     2236889999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       221 iwslG~il~ell~g~~Pf~~~~~  243 (350)
T 1rdq_E          221 WWALGVLIYEMAAGYPPFFADQP  243 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EecccHhHhHHhhCCCCCCCCCH
Confidence            99999999999999999987654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=9e-28  Score=151.76  Aligned_cols=100  Identities=17%  Similarity=0.348  Sum_probs=84.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc-----eEEecccccccCCCCCcce-----eccccccccccccccee
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-----AKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~   71 (110)
                      |++.||+|||   +.+++||||||+||+++.++.     ++++|||++..........     ......|++.|+|||.+
T Consensus       113 qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  189 (330)
T 2izr_A          113 QLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTH  189 (330)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHH
Confidence            7899999999   789999999999999998877     9999999998654322211     12334689999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           72 TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        72 ~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .+..++.++|+||+|++++|+++|..||.+.+.
T Consensus       190 ~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~  222 (330)
T 2izr_A          190 LGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA  222 (330)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             cCCCCCchhHHHHHHHHHHHHhcCCCCcccccc
Confidence            998899999999999999999999999987544

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.95  E-value=5.9e-28  Score=154.41  Aligned_cols=98  Identities=21%  Similarity=0.288  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC--CCCceEEecccccccCCCCCcc-----eecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~--~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.||.|||   +.+++||||||.||+++  .++.++++|||+++........     .......|++.|+|||.+.+.
T Consensus       160 qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  236 (364)
T 3op5_A          160 RILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV  236 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHH---HCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC
Confidence            7899999999   78999999999999998  8899999999999765432111     111223488999999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      .++.++|+||+|+++|++++|..||.+.
T Consensus       237 ~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          237 APSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            8999999999999999999999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=6.5e-28  Score=157.77  Aligned_cols=98  Identities=26%  Similarity=0.493  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.||.|||   + .+++||||||.||+++.++.++++|||+++........  .....|++.|+|||++.+..++.++
T Consensus       256 qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~  330 (446)
T 4ejn_A          256 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAV  330 (446)
T ss_dssp             HHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHH
T ss_pred             HHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcc--cccccCCccccCHhhcCCCCCCCcc
Confidence            7899999999   6 89999999999999999999999999998754332222  1233689999999999988999999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       331 DiwslG~il~ell~g~~Pf~~~~~  354 (446)
T 4ejn_A          331 DWWGLGVVMYEMMCGRLPFYNQDH  354 (446)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             chhhhHHHHHHHhhCCCCCCCCCH
Confidence            999999999999999999977654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=1.1e-27  Score=159.88  Aligned_cols=97  Identities=27%  Similarity=0.500  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.++++|||+++.........  ....|++.|+|||++.+..++.++|
T Consensus       297 qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~--~~~~GT~~Y~APE~l~~~~~~~~~D  371 (543)
T 3c4z_A          297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELLLGEEYDFSVD  371 (543)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCB--CCCCSCTTTSCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccc--ccccCCccccChhhhcCCCCChHHh
Confidence            7899999999   7999999999999999999999999999998765433221  2236899999999999988999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++||+++|..||.+.+
T Consensus       372 iwSlGvilyelltG~~PF~~~~  393 (543)
T 3c4z_A          372 YFALGVTLYEMIAARGPFRARG  393 (543)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCTT
T ss_pred             cCcchHHHHHHHhCCCCCCCCc
Confidence            9999999999999999998764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.95  E-value=4.2e-28  Score=159.53  Aligned_cols=97  Identities=21%  Similarity=0.312  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||.||+++.++.++++|||+++.......   .....+++.|+|||++.+..++.++|
T Consensus       172 qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~D  245 (464)
T 3ttj_A          172 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  245 (464)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCC---C----CCCTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc---cCCCcccccccCHHHHcCCCCCHHHH
Confidence            7899999999   78999999999999999999999999999876543211   12236889999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++|+++|+.||.+.+.
T Consensus       246 iwSlG~il~ell~g~~pF~g~~~  268 (464)
T 3ttj_A          246 IWSVGCIMGEMVRHKILFPGRDY  268 (464)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.94  E-value=2.1e-27  Score=149.19  Aligned_cols=100  Identities=21%  Similarity=0.368  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++..........  ....+++.|+|||.+.+ ..++.++
T Consensus       127 qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  201 (311)
T 3niz_A          127 QLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSV  201 (311)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccc--cCCcccCCcCCHHHhcCCCCCCchH
Confidence            7899999999   7899999999999999999999999999987654322221  22357889999999876 4578999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      |+||+|++++++++|..||.+.+..+
T Consensus       202 DiwslG~il~~ll~g~~pf~~~~~~~  227 (311)
T 3niz_A          202 DIWSIGCIFAEMITGKPLFPGVTDDD  227 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSTTT
T ss_pred             HhHHHHHHHHHHHhCCCCCCCCChHH
Confidence            99999999999999999998765543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.94  E-value=2.7e-28  Score=154.08  Aligned_cols=101  Identities=27%  Similarity=0.397  Sum_probs=83.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++...............++..|+|||.+.+..++.++|
T Consensus       125 qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  201 (327)
T 3poz_A          125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD  201 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhh
Confidence            7899999999   7899999999999999999999999999987665433333323334677899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|+++|++++ |..||.+.+..
T Consensus       202 i~slG~il~ellt~g~~p~~~~~~~  226 (327)
T 3poz_A          202 VWSYGVTVWELMTFGSKPYDGIPAS  226 (327)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred             hhhhHHHHHHHHhcCCCCccCCCHH
Confidence            9999999999999 99999876543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=4.9e-28  Score=157.20  Aligned_cols=96  Identities=20%  Similarity=0.218  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccccccccccccee----------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV----------   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----------   71 (110)
                      |++.||.|||   +.+++||||||+||+++.++.+|++|||+++.....     .....| +.|+|||++          
T Consensus       219 qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~  289 (413)
T 3dzo_A          219 QVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQH  289 (413)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred             HHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccc
Confidence            7899999999   799999999999999999999999999998754332     122356 899999998          


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           72 TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        72 ~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      ....++.++|+||+|+++|++++|+.||.+.+..+
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~  324 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG  324 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            44457889999999999999999999998765543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=3.4e-27  Score=146.86  Aligned_cols=100  Identities=15%  Similarity=0.265  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc-----eEEecccccccCCCCCcc-----eeccccccccccccccee
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-----AKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~   71 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.     ++++|||++.........     .......+++.|+|||.+
T Consensus       114 qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  190 (298)
T 1csn_A          114 QMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH  190 (298)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhh
Confidence            7899999999   899999999999999987765     999999998765432221     112234688999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           72 TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        72 ~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .+..++.++|+||+|++++++++|+.||.+.+.
T Consensus       191 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  223 (298)
T 1csn_A          191 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  223 (298)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS
T ss_pred             cCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc
Confidence            888899999999999999999999999987543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=2.3e-27  Score=149.31  Aligned_cols=101  Identities=31%  Similarity=0.550  Sum_probs=85.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       147 ~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  223 (321)
T 2qkw_B          147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSD  223 (321)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHH
T ss_pred             HHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccc
Confidence            6889999999   7999999999999999999999999999987654332222223335788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|++++|+.||.+..+.
T Consensus       224 i~slG~il~ell~g~~p~~~~~~~  247 (321)
T 2qkw_B          224 VYSFGVVLFEVLCARSAIVQSLPR  247 (321)
T ss_dssp             HHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred             hHhHHHHHHHHHhCCCcccccCcH
Confidence            999999999999999999765543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.94  E-value=6.9e-28  Score=151.97  Aligned_cols=100  Identities=24%  Similarity=0.344  Sum_probs=83.3

Q ss_pred             cHHHHHHHHhcCCCC----------CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccccccccccccee
Q 043407            2 EIANALAYLHVGFPR----------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~----------~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~   71 (110)
                      |++.|+.|||   +.          +++||||||.||+++.++.++++|||+++...............+++.|+|||.+
T Consensus       129 qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  205 (322)
T 3soc_A          129 TMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL  205 (322)
T ss_dssp             HHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHH
T ss_pred             HHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhc
Confidence            7889999999   77          9999999999999999999999999999766544333333334688999999998


Q ss_pred             ccC-----CCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           72 TTG-----DYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        72 ~~~-----~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .+.     .++.++|+||+|+++||+++|..||.+...
T Consensus       206 ~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred             ccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence            763     345678999999999999999999987544

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.94  E-value=1.6e-27  Score=150.02  Aligned_cols=98  Identities=21%  Similarity=0.388  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++..........  ....+++.|+|||++.+. .++.++
T Consensus       116 qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  190 (317)
T 2pmi_A          116 QLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYRAPDVLMGSRTYSTSI  190 (317)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC--CCCCSCCTTCCHHHHTTCCCCCTHH
T ss_pred             HHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC--CCCcccccccCchHhhCCCCCCcHH
Confidence            7899999999   7899999999999999999999999999987654322111  123578899999998764 578999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       191 DiwslG~il~el~~g~~pf~~~~~  214 (317)
T 2pmi_A          191 DIWSCGCILAEMITGKPLFPGTND  214 (317)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999987654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=4.7e-28  Score=155.53  Aligned_cols=96  Identities=17%  Similarity=0.182  Sum_probs=78.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-------   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-------   74 (110)
                      |++.||+|||   +.+++||||||.||+++.++.++++|||+++....     ......| +.|+|||.+...       
T Consensus       214 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~  284 (377)
T 3byv_A          214 QVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHR  284 (377)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccc
Confidence            7899999999   78999999999999999999999999999875332     1122256 889999999877       


Q ss_pred             ----CCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           75 ----DYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        75 ----~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                          .++.++|+||+|+++||+++|..||.+.+..+
T Consensus       285 ~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~  320 (377)
T 3byv_A          285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG  320 (377)
T ss_dssp             CCEEECCHHHHHHHHHHHHHHHHHSSCCC------C
T ss_pred             cccccCChhhhHHHHHHHHHHHHHCCCCCccccccc
Confidence                78999999999999999999999997765443

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.94  E-value=4e-27  Score=151.85  Aligned_cols=97  Identities=29%  Similarity=0.493  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc---CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........   .....|++.|+|||++..   ..++.
T Consensus       123 qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~---~~~~~gt~~Y~aPE~~~~~~~~~~~~  196 (384)
T 4fr4_A          123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAPEMFSSRKGAGYSF  196 (384)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC---BCCCCSCGGGCCGGGTCCCSSCCBCT
T ss_pred             HHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc---eeccCCCccccCCeeeccCCCCCCCc
Confidence            7899999999   79999999999999999999999999999976643322   123368999999999864   34788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||...+.
T Consensus       197 ~~DiwSlG~il~elltG~~Pf~~~~~  222 (384)
T 4fr4_A          197 AVDWWSLGVTAYELLRGRRPYHIRSS  222 (384)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCCTT
T ss_pred             cceeechHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999999975543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=1.2e-27  Score=149.21  Aligned_cols=99  Identities=24%  Similarity=0.463  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.......... .....|++.|+|||.+.+..++.++|
T Consensus       119 qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~D  194 (294)
T 4eqm_A          119 QILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTD  194 (294)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc-cCccccCccccCHhHhcCCCCCchHh
Confidence            7889999999   7899999999999999999999999999987654322111 12235888999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|+.||.+.+.
T Consensus       195 i~slG~~l~~ll~g~~pf~~~~~  217 (294)
T 4eqm_A          195 IYSIGIVLYEMLVGEPPFNGETA  217 (294)
T ss_dssp             HHHHHHHHHHHHHSSCSSCSSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCh
Confidence            99999999999999999987654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.94  E-value=8.9e-28  Score=156.64  Aligned_cols=96  Identities=26%  Similarity=0.329  Sum_probs=83.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc--eEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++.++.  ++++|||++........     ...+++.|+|||++.+..++.+
T Consensus       208 qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~  279 (429)
T 3kvw_A          208 SILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY-----TYIQSRFYRAPEVILGARYGMP  279 (429)
T ss_dssp             HHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHHTBCCCTH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecCCccc-----ccCCCCCccChHHHhCCCCCch
Confidence            7899999999   789999999999999998877  99999999865433221     2367889999999999899999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+|+++||+++|..||.+.+..
T Consensus       280 ~DiwSlG~il~elltG~~pf~~~~~~  305 (429)
T 3kvw_A          280 IDMWSLGCILAELLTGYPLLPGEDEG  305 (429)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999877643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=2e-27  Score=151.45  Aligned_cols=95  Identities=31%  Similarity=0.430  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-------------------------CCceEEecccccccCCCCCcceec
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------------DHVAKLFDFSLAESIPDGETHIKD   56 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-------------------------~~~~~l~dfg~~~~~~~~~~~~~~   56 (110)
                      |++.||.|||   +.+++||||||+||+++.                         ++.++++|||++........    
T Consensus       145 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~----  217 (360)
T 3llt_A          145 EILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG----  217 (360)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC----
T ss_pred             HHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc----
Confidence            7899999999   799999999999999975                         78899999999876443221    


Q ss_pred             ccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           57 AIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        57 ~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                       ...+++.|+|||++.+..++.++|+||+|+++|++++|+.||.+.+.
T Consensus       218 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  264 (360)
T 3llt_A          218 -SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH  264 (360)
T ss_dssp             -SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             -CccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH
Confidence             23578899999999999999999999999999999999999977653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.94  E-value=1.9e-27  Score=150.33  Aligned_cols=98  Identities=27%  Similarity=0.432  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++........  .....|++.|+|||.+....++.++|
T Consensus       129 qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  203 (327)
T 3a62_A          129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THTFCGTIEYMAPEILMRSGHNRAVD  203 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHH
T ss_pred             HHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCcc--ccccCCCcCccCHhhCcCCCCCCccc
Confidence            7889999999   789999999999999999999999999998654322211  12235889999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++|++++|..||.+.+.
T Consensus       204 iwslG~il~el~~g~~pf~~~~~  226 (327)
T 3a62_A          204 WWSLGALMYDMLTGAPPFTGENR  226 (327)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             chhHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999987654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=1e-27  Score=150.12  Aligned_cols=97  Identities=22%  Similarity=0.343  Sum_probs=84.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........   ....+++.|+|||.+....++.++|
T Consensus       128 qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~D  201 (308)
T 3g33_A          128 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL---TPVVVTLWYRAPEVLLQSTYATPVD  201 (308)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCS---GGGGCCCSSCCHHHHHTSCCCSTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCccc---CCccccccccCchHHcCCCCCchHH
Confidence            7899999999   789999999999999999999999999998765432221   2236788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       202 iwslG~il~~l~~g~~pf~~~~~  224 (308)
T 3g33_A          202 MWSVGCIFAEMFRRKPLFCGNSE  224 (308)
T ss_dssp             HHHHHHHHHHTTTSSCSCCCSSH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999977654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.94  E-value=3.4e-27  Score=152.75  Aligned_cols=98  Identities=27%  Similarity=0.509  Sum_probs=79.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.||.|||   +.+++||||||.||+++.   ++.++++|||+++.......   .....+++.|+|||++....++.
T Consensus       169 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  242 (400)
T 1nxk_A          169 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS---LTTPCYTPYYVAPEVLGPEKYDK  242 (400)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSS
T ss_pred             HHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCc---cccCCCCCCccCHhhcCCCCCCC
Confidence            7889999999   799999999999999987   78899999999876543221   12336788999999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++|+||+|+++|++++|..||.+.+..
T Consensus       243 ~~DiwslG~il~ell~g~~pf~~~~~~  269 (400)
T 1nxk_A          243 SCDMWSLGVIMYILLCGYPPFYSNHGL  269 (400)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCCTTC
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCccc
Confidence            999999999999999999999776543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=1.8e-27  Score=150.69  Aligned_cols=97  Identities=27%  Similarity=0.472  Sum_probs=83.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCC-chh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........   .....|++.|+|||.+.+..+. .++
T Consensus       122 qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~  195 (328)
T 3fe3_A          122 QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGKKYDGPEV  195 (328)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG---GGTTSSSGGGCCHHHHHTCCCCSHHH
T ss_pred             HHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc---cccccCCcceeCcccccCCCcCCchh
Confidence            7899999999   78999999999999999999999999999876543321   2233688999999999887764 789


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       196 DiwslG~il~ell~g~~pf~~~~~  219 (328)
T 3fe3_A          196 DVWSLGVILYTLVSGSLPFDGQNL  219 (328)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhhhHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.94  E-value=2.1e-27  Score=154.54  Aligned_cols=98  Identities=34%  Similarity=0.484  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-CceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++.+ +.+|++|||+++........   ....+++.|+|||++.+. .++.+
T Consensus       164 qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~  237 (420)
T 1j1b_A          164 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRAPELIFGATDYTSS  237 (420)
T ss_dssp             HHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC---CSCCSCTTSCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCc---eeeeeCCCcCCHHHHcCCCCCCch
Confidence            7899999999   8999999999999999865 56899999999865433221   123578899999998765 68999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+||++||+++|+.||.+.+..
T Consensus       238 ~DiwSlG~il~ell~G~~pf~~~~~~  263 (420)
T 1j1b_A          238 IDVWSAGCVLAELLLGQPIFPGDSGV  263 (420)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999877643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.94  E-value=9.8e-28  Score=152.73  Aligned_cols=100  Identities=26%  Similarity=0.443  Sum_probs=85.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       201 ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  277 (359)
T 3vhe_A          201 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  277 (359)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhh
Confidence            7899999999   7899999999999999999999999999997665444333334446788899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       278 i~slG~il~ellt~g~~p~~~~~~  301 (359)
T 3vhe_A          278 VWSFGVLLWEIFSLGASPYPGVKI  301 (359)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hhhHHHHHHHHHhcCCCCCCccch
Confidence            9999999999998 9999987653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.94  E-value=4.6e-27  Score=146.06  Aligned_cols=101  Identities=18%  Similarity=0.337  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE---CCCCceEEecccccccCCCCCcc-----eecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.|+.|||   +.+++||||||.||++   +.++.++++|||++.........     .......+++.|+|||.+.+
T Consensus       113 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 4hgt_A          113 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcC
Confidence            7899999999   7999999999999999   78889999999998765432221     11223468889999999998


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ..++.++|+||+|++++++++|+.||.+.+..
T Consensus       190 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  221 (296)
T 4hgt_A          190 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA  221 (296)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS
T ss_pred             CCCCchhHHHHHHHHHHHHhcCCCCCcccchh
Confidence            88999999999999999999999999875543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.94  E-value=3.3e-27  Score=154.60  Aligned_cols=98  Identities=24%  Similarity=0.405  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC---CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++   .++.++++|||++..........  ....|++.|+|||++....++.
T Consensus       118 qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~  192 (444)
T 3soa_A          118 QILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW--FGFAGTPGYLSPEVLRKDPYGK  192 (444)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBC--CCSCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCcee--ecccCCcccCCHHHhcCCCCCC
Confidence            7899999999   78999999999999998   45789999999987654432221  2236899999999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||.+.+.
T Consensus       193 ~~DIwSlGvilyell~G~~Pf~~~~~  218 (444)
T 3soa_A          193 PVDLWACGVILYILLVGYPPFWDEDQ  218 (444)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccHHHHHHHHHHHhCCCCCCCccH
Confidence            99999999999999999999976653

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.94  E-value=4.3e-27  Score=149.47  Aligned_cols=98  Identities=28%  Similarity=0.477  Sum_probs=83.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........   ....|++.|+|||.+.+..+ +.++
T Consensus       116 qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~  189 (336)
T 3h4j_B          116 QIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVINGKLYAGPEV  189 (336)
T ss_dssp             HHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT---CCCTTSTTTSCGGGSCCSGGGCHHH
T ss_pred             HHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc---ccccCCcCcCCHHHHcCCCCCCCcc
Confidence            7899999999   789999999999999999999999999998765433221   22368899999999987765 6889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++|++++|..||.+....
T Consensus       190 DiwslG~il~~ll~g~~Pf~~~~~~  214 (336)
T 3h4j_B          190 DVWSCGIVLYVMLVGRLPFDDEFIP  214 (336)
T ss_dssp             HHHHHHHHHHHHHHSSCSSBCSSST
T ss_pred             chhHHHHHHHHHHhCCCCCCCccHH
Confidence            9999999999999999999876543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.9e-27  Score=151.61  Aligned_cols=96  Identities=23%  Similarity=0.408  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++.......     ...+++.|+|||.+.+ ..++.++
T Consensus       136 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  207 (367)
T 1cm8_A          136 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT-----GYVVTRWYRAPEVILNWMRYTQTV  207 (367)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC-----SSCSCGGGCCTHHHHTTTCCCTTH
T ss_pred             HHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccccccccC-----cCcCCCCcCCHHHHhCCCCCChhh
Confidence            7899999999   79999999999999999999999999999876543221     2257889999999877 6689999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|++++++++|+.||.+.+..
T Consensus       208 DiwslG~il~ell~g~~pf~~~~~~  232 (367)
T 1cm8_A          208 DIWSVGCIMAEMITGKTLFKGSDHL  232 (367)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999876543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.94  E-value=1.2e-27  Score=151.15  Aligned_cols=100  Identities=26%  Similarity=0.419  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................|++.|+|||.+....+ +.++
T Consensus       113 qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  189 (323)
T 3tki_A          113 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  189 (323)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred             HHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcc
Confidence            7899999999   79999999999999999999999999999876543222222223468899999999987765 6789


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||...+.
T Consensus       190 DiwslG~il~~ll~g~~pf~~~~~  213 (323)
T 3tki_A          190 DVWSCGIVLTAMLAGELPWDQPSD  213 (323)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCch
Confidence            999999999999999999976554

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.94  E-value=5.4e-27  Score=147.96  Aligned_cols=98  Identities=28%  Similarity=0.492  Sum_probs=84.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++..........  ....|++.|+|||.+....++.++|
T Consensus       149 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  223 (321)
T 2c30_A          149 AVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSLVGTPYWMAPEVISRSLYATEVD  223 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc--ccccCCccccCHhhhcCCCCCchhh
Confidence            6889999999   7899999999999999999999999999987654432221  2336889999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       224 v~slG~il~el~~g~~pf~~~~~  246 (321)
T 2c30_A          224 IWSLGIMVIEMVDGEPPYFSDSP  246 (321)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=151.33  Aligned_cols=101  Identities=27%  Similarity=0.397  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................+++.|++||.+.+..++.++|
T Consensus       125 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  201 (327)
T 3lzb_A          125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD  201 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHH
Confidence            7899999999   7899999999999999999999999999987654433322222334677899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|+++|++++ |..||.+.+..
T Consensus       202 i~slG~il~ell~~g~~p~~~~~~~  226 (327)
T 3lzb_A          202 VWSYGVTVWELMTFGSKPYDGIPAS  226 (327)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCHH
Confidence            9999999999999 99999876543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.94  E-value=2.3e-27  Score=149.03  Aligned_cols=98  Identities=32%  Similarity=0.454  Sum_probs=76.4

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|++|||   +.+  ++||||||+||+++.++.++++|||++........  ......+++.|+|||.+.+..++.+
T Consensus       145 qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~  219 (309)
T 3p86_A          145 DVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--SSKSAAGTPEWMAPEVLRDEPSNEK  219 (309)
T ss_dssp             HHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc--ccccCCCCccccChhhhcCCCCCch
Confidence            7899999999   788  99999999999999999999999999865433221  1122368889999999998889999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|+++|++++|..||.+.+.
T Consensus       220 ~DiwslG~il~elltg~~Pf~~~~~  244 (309)
T 3p86_A          220 SDVYSFGVILWELATLQQPWGNLNP  244 (309)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTTTSCH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999999999999999999987654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.94  E-value=3.8e-27  Score=158.03  Aligned_cols=97  Identities=30%  Similarity=0.532  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.++++|||+++........   ....|++.|+|||++.+..++.++|
T Consensus       294 qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~---~~~~GT~~Y~APEvl~~~~~~~~~D  367 (576)
T 2acx_A          294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI---KGRVGTVGYMAPEVVKNERYTFSPD  367 (576)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCE---ECCCSCGGGCCHHHHTTCEESSHHH
T ss_pred             HHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccCccc---cccCCCccccCHHHHcCCCCCccch
Confidence            7899999999   789999999999999999999999999999876543321   1236899999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|+++||+++|..||.+.+.
T Consensus       368 iwSLGvilyeLltG~~PF~~~~~  390 (576)
T 2acx_A          368 WWALGCLLYEMIAGQSPFQQRKK  390 (576)
T ss_dssp             HHHHHHHHHHHHHSSCSSSCSSS
T ss_pred             HHHHHHHHHHHHhCCCCCccccc
Confidence            99999999999999999987643

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.94  E-value=4.7e-27  Score=150.48  Aligned_cols=98  Identities=31%  Similarity=0.475  Sum_probs=84.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC----ceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|+.|||   +.+++||||||.||+++.++    .++++|||++.........   ....|++.|+|||++....++
T Consensus       123 qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  196 (361)
T 2yab_A          123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLG  196 (361)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCcc---ccCCCCccEECchHHcCCCCC
Confidence            7899999999   78999999999999998776    7999999999766443221   223689999999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .++|+||+|+++|++++|..||.+.+..
T Consensus       197 ~~~DiwslGvil~~ll~g~~Pf~~~~~~  224 (361)
T 2yab_A          197 LEADMWSIGVITYILLSGASPFLGDTKQ  224 (361)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999999876543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=2.2e-27  Score=149.37  Aligned_cols=101  Identities=25%  Similarity=0.403  Sum_probs=78.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++................+++.|++||.+....++.++|
T Consensus       145 qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (323)
T 3qup_A          145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSD  221 (323)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccc
Confidence            7889999999   7899999999999999999999999999987654433322222334667899999999988999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|++++++++ |..||.+.+..
T Consensus       222 i~slG~il~ell~~g~~p~~~~~~~  246 (323)
T 3qup_A          222 VWAFGVTMWEIMTRGQTPYAGIENA  246 (323)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred             hhhHHHHHHHHHhCCCCCccccChH
Confidence            9999999999999 99999876543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.1e-26  Score=144.96  Aligned_cols=97  Identities=25%  Similarity=0.462  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC---CCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD---YNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~---~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++..........  ....+++.|+|||.+....   .+.
T Consensus       145 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~  219 (298)
T 2zv2_A          145 DLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAPESLSETRKIFSGK  219 (298)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEE--CCCCSCGGGCCGGGCCTTCCCEESH
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccc--cCCcCCccccChhhhccCCCCCCCc
Confidence            7899999999   7899999999999999999999999999987654432221  2236889999999987655   367


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|+++|++++|..||.+.+
T Consensus       220 ~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          220 ALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            8999999999999999999997654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.94  E-value=2.9e-27  Score=152.77  Aligned_cols=98  Identities=29%  Similarity=0.453  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++ .++.++++|||+++........   ....+++.|+|||.+.+. .++.+
T Consensus       149 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~  222 (394)
T 4e7w_A          149 QLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN---VSYICSRYYRAPELIFGATNYTTN  222 (394)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC---CSSCSCGGGCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCC---cccccCcCccCHHHHcCCCCCCcH
Confidence            7899999999   78999999999999998 7899999999999765433222   123578899999998765 48899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+|++++++++|+.||.+.+..
T Consensus       223 ~DiwSlG~il~ell~g~~pf~~~~~~  248 (394)
T 4e7w_A          223 IDIWSTGCVMAELMQGQPLFPGESGI  248 (394)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999887643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.94  E-value=3.8e-27  Score=152.08  Aligned_cols=97  Identities=23%  Similarity=0.428  Sum_probs=77.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc--------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--------   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------   73 (110)
                      ||+.||.|||   +.+++||||||.||+++ ++.++++|||++................|++.|+|||++..        
T Consensus       163 qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  238 (390)
T 2zmd_A          163 NMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENG  238 (390)
T ss_dssp             HHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC-------
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhcccccccc
Confidence            7899999999   89999999999999995 57899999999976644332222233468999999999865        


Q ss_pred             ---CCCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           74 ---GDYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        74 ---~~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                         ..++.++|+||+|+++|++++|..||...
T Consensus       239 ~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~  270 (390)
T 2zmd_A          239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  270 (390)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccCCCChhhHHHHHHHHHHHHHCCCcchhh
Confidence               35788999999999999999999999764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.94  E-value=4.1e-27  Score=151.42  Aligned_cols=100  Identities=28%  Similarity=0.411  Sum_probs=85.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++................+++.|+|||.+.+..++.++|
T Consensus       199 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  275 (382)
T 3tt0_A          199 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  275 (382)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhH
Confidence            7899999999   7899999999999999999999999999987665433323333335677899999999988999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       276 iwslG~il~ellt~g~~p~~~~~~  299 (382)
T 3tt0_A          276 VWSFGVLLWEIFTLGGSPYPGVPV  299 (382)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999 9999976643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.94  E-value=5.7e-27  Score=150.56  Aligned_cols=96  Identities=23%  Similarity=0.348  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEECCCC----------------------------------------------
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDH----------------------------------------------   34 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~~~~----------------------------------------------   34 (110)
                      |++.||.|||   +. +++||||||.||+++.++                                              
T Consensus       154 qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (397)
T 1wak_A          154 QVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNA  230 (397)
T ss_dssp             HHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGG
T ss_pred             HHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccc
Confidence            7899999999   77 999999999999998765                                              


Q ss_pred             ---ceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           35 ---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        35 ---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                         .++++|||++.......     ....+++.|+|||++.+..++.++|+||+|+++|++++|..||.+.+..
T Consensus       231 ~~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~  299 (397)
T 1wak_A          231 EKLKVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGE  299 (397)
T ss_dssp             GGCCEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred             cccceEeccccccccccccC-----ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCccc
Confidence               79999999987654322     1225788999999999888999999999999999999999999866543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.94  E-value=9e-27  Score=148.49  Aligned_cols=96  Identities=27%  Similarity=0.425  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc---eEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.   ++++|||++..........  ....|++.|+|||++....++.
T Consensus       138 qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~  212 (351)
T 3c0i_A          138 QILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA--GGRVGTPHFMAPEVVKREPYGK  212 (351)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBC--CCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeee--cCCcCCcCccCHHHHcCCCCCc
Confidence            7899999999   789999999999999976554   9999999987665432211  2236889999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++|+||+|+++|++++|..||.+.
T Consensus       213 ~~DiwslG~il~~ll~g~~pf~~~  236 (351)
T 3c0i_A          213 PVDVWGCGVILFILLSGCLPFYGT  236 (351)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             hHhhHHHHHHHHHHHHCCCCCCCc
Confidence            999999999999999999999764

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.94  E-value=4.3e-27  Score=148.46  Aligned_cols=98  Identities=20%  Similarity=0.381  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++..........  ....+++.|+|||.+.+ ..++.++
T Consensus       108 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  182 (324)
T 3mtl_A          108 QLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY--DNEVVTLWYRPPDILLGSTDYSTQI  182 (324)
T ss_dssp             HHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHH
T ss_pred             HHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc--ccccCcccccChhhhcCCCCCCcHH
Confidence            7889999999   7999999999999999999999999999987544322211  12257889999999876 4578999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       183 DiwslG~il~~l~~g~~pf~~~~~  206 (324)
T 3mtl_A          183 DMWGVGCIFYEMATGRPLFPGSTV  206 (324)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.94  E-value=1.9e-27  Score=147.87  Aligned_cols=98  Identities=20%  Similarity=0.385  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.........  .....+++.|+|||.+.+. .++.++
T Consensus       108 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~  182 (288)
T 1ob3_A          108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTI  182 (288)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc--cccccccccccCchheeCCCCCCcHH
Confidence            7899999999   789999999999999999999999999998765432211  1122578899999998764 478999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       183 DiwslG~il~~l~~g~~pf~~~~~  206 (288)
T 1ob3_A          183 DIWSVGCIFAEMVNGTPLFPGVSE  206 (288)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=1.6e-27  Score=149.52  Aligned_cols=101  Identities=25%  Similarity=0.484  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... .......|++.|+|||.+.+..++.++
T Consensus       124 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  200 (311)
T 3ork_A          124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS  200 (311)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHH
T ss_pred             HHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchH
Confidence            7889999999   789999999999999999999999999998765432211 122233588999999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++|++++|+.||.+.+..
T Consensus       201 Di~slG~~l~~ll~g~~pf~~~~~~  225 (311)
T 3ork_A          201 DVYSLGCVLYEVLTGEPPFTGDSPV  225 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChH
Confidence            9999999999999999999876543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4e-27  Score=149.27  Aligned_cols=100  Identities=24%  Similarity=0.403  Sum_probs=85.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       180 qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  256 (344)
T 1rjb_A          180 QVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD  256 (344)
T ss_dssp             HHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHh
Confidence            7899999999   7999999999999999999999999999987654333333333335677899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       257 i~slG~il~el~t~g~~p~~~~~~  280 (344)
T 1rjb_A          257 VWSYGILLWEIFSLGVNPYPGIPV  280 (344)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCc
Confidence            9999999999998 9999987653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=5e-27  Score=147.01  Aligned_cols=101  Identities=26%  Similarity=0.399  Sum_probs=86.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|++||.+.+..++.++|
T Consensus       158 qi~~~l~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  234 (314)
T 2ivs_A          158 QISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD  234 (314)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhh
Confidence            7899999999   7899999999999999999999999999987665443333333335677899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|++++++++ |..||.+.+..
T Consensus       235 i~slG~il~el~t~g~~p~~~~~~~  259 (314)
T 2ivs_A          235 VWSFGVLLWEIVTLGGNPYPGIPPE  259 (314)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999 99999876543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.94  E-value=3.1e-27  Score=151.51  Aligned_cols=96  Identities=28%  Similarity=0.463  Sum_probs=74.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++......     ....+++.|+|||.+.+ ..++.++
T Consensus       140 qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  211 (367)
T 2fst_X          140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TGYVATRWYRAPEIMLNWMHYNQTV  211 (367)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTH
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccccccccC-----CCcCcCcCccChHHHcCCcCCCchh
Confidence            7899999999   7999999999999999999999999999987643321     12257889999999876 5688999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|++++++++|+.||.+.+..
T Consensus       212 DiwslG~il~ell~g~~pf~~~~~~  236 (367)
T 2fst_X          212 DIWSVGCIMAELLTGRTLFPGTDHI  236 (367)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999876643

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=2.1e-26  Score=144.34  Aligned_cols=100  Identities=29%  Similarity=0.431  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce------------ecccccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI------------KDAIPIGIMGFVATE   69 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------~~~~~~~~~~~~~pe   69 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++..........            ......|++.|+|||
T Consensus       116 qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  192 (310)
T 3s95_A          116 DIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE  192 (310)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHH
T ss_pred             HHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHH
Confidence            7899999999   7999999999999999999999999999987654322111            111336888999999


Q ss_pred             eeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           70 YVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        70 ~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .+.+..++.++|+||+|+++|++++|..||.....
T Consensus       193 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~  227 (310)
T 3s95_A          193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP  227 (310)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSC
T ss_pred             HhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhh
Confidence            99998899999999999999999999999876544

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.94  E-value=3e-27  Score=151.90  Aligned_cols=100  Identities=24%  Similarity=0.419  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++...............++..|+|||.+....++.++|
T Consensus       221 qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  297 (377)
T 3cbl_A          221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD  297 (377)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHH
T ss_pred             HHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhh
Confidence            7889999999   7999999999999999999999999999987644322221112223566799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+.+.
T Consensus       298 vwslG~il~el~t~g~~p~~~~~~  321 (377)
T 3cbl_A          298 VWSFGILLWETFSLGASPYPNLSN  321 (377)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 9999976543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.94  E-value=1.4e-26  Score=143.92  Aligned_cols=100  Identities=18%  Similarity=0.337  Sum_probs=84.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC---CCCceEEecccccccCCCCCcc-----eecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.|+.|||   +.+++|+||||.||+++   .++.++++|||++.........     .......+++.|+|||.+.+
T Consensus       113 qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 3uzp_A          113 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcC
Confidence            7899999999   79999999999999994   7889999999998765433221     11223368889999999998


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ..++.++|+||+|++++++++|+.||.+.+.
T Consensus       190 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  220 (296)
T 3uzp_A          190 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKA  220 (296)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence            8899999999999999999999999987543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.94  E-value=3.7e-27  Score=149.74  Aligned_cols=97  Identities=23%  Similarity=0.429  Sum_probs=75.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc--------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--------   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------   73 (110)
                      |++.|+.|||   +.+++||||||.||+++ ++.++++|||++................|++.|+|||.+..        
T Consensus       116 qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  191 (343)
T 3dbq_A          116 NMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG  191 (343)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC------
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhcccccccc
Confidence            7899999999   78999999999999996 67899999999976654333222233468999999999864        


Q ss_pred             ---CCCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           74 ---GDYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        74 ---~~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                         ..++.++|+||+|++++++++|..||...
T Consensus       192 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  223 (343)
T 3dbq_A          192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  223 (343)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence               56788999999999999999999999753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.94  E-value=8.7e-27  Score=152.76  Aligned_cols=99  Identities=23%  Similarity=0.366  Sum_probs=76.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-------------------------eec
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-------------------------IKD   56 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------~~~   56 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.++|+|||+++........                         ...
T Consensus       164 qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (458)
T 3rp9_A          164 NLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL  240 (458)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-----------------------
T ss_pred             HHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccc
Confidence            7899999999   789999999999999999999999999999765322110                         011


Q ss_pred             ccccccccccccceec-cCCCCchhhHHHHHHHHHHHHh-----------CCCCcccCC
Q 043407           57 AIPIGIMGFVATEYVT-TGDYNEKCDVFSFGVLLLVLLT-----------GQKLYSIDE  103 (110)
Q Consensus        57 ~~~~~~~~~~~pe~~~-~~~~~~~~d~~s~g~~~~~~~~-----------g~~p~~~~~  103 (110)
                      ....|++.|+|||++. ...++.++|+||+||++|||++           |..+|.+.+
T Consensus       241 ~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~  299 (458)
T 3rp9_A          241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSS  299 (458)
T ss_dssp             ----CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC---
T ss_pred             cCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCc
Confidence            2235788999999864 5568999999999999999998           667776544

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=1.3e-26  Score=149.11  Aligned_cols=98  Identities=21%  Similarity=0.285  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC--CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|+.|||+. ..+++||||||.||+++  .++.++++|||++........     ...+++.|+|||++.+..++.+
T Consensus       165 qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~  238 (382)
T 2vx3_A          165 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-----QYIQSRFYRSPEVLLGMPYDLA  238 (382)
T ss_dssp             HHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHTTCCCCTH
T ss_pred             HHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccc-----cccCCccccChHHHcCCCCCcH
Confidence            788999999932 36899999999999995  467899999999876543221     2367889999999999889999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+|++++++++|..||.+.+..
T Consensus       239 ~DiwSlG~il~elltg~~pf~~~~~~  264 (382)
T 2vx3_A          239 IDMWSLGCILVEMHTGEPLFSGANEV  264 (382)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999876543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.94  E-value=1.4e-26  Score=148.25  Aligned_cols=97  Identities=29%  Similarity=0.510  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.+   +.++++|||++.........   ....|++.|+|||++....++.
T Consensus       136 qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~  209 (362)
T 2bdw_A          136 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSK  209 (362)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSC---CCSCSCTTTCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCccc---ccCCCCccccCHHHHccCCCCc
Confidence            7899999999   7899999999999999865   45999999998765433221   2236889999999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||.+.+.
T Consensus       210 ~~DiwslG~il~~ll~g~~Pf~~~~~  235 (362)
T 2bdw_A          210 PVDIWACGVILYILLVGYPPFWDEDQ  235 (362)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999999976553

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.3e-26  Score=146.51  Aligned_cols=97  Identities=30%  Similarity=0.438  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC----ceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|+.|||   +.+++||||||.||+++.++    .++++|||++.........   ....+++.|+|||++....++
T Consensus       122 qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  195 (326)
T 2y0a_A          122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLG  195 (326)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCC---CCCCSCTTTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcc---ccccCCcCcCCceeecCCCCC
Confidence            7899999999   79999999999999998877    7999999998766433221   123588999999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|++++++++|..||.+.+.
T Consensus       196 ~~~DiwslG~il~~ll~g~~pf~~~~~  222 (326)
T 2y0a_A          196 LEADMWSIGVITYILLSGASPFLGDTK  222 (326)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             cHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence            999999999999999999999977654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.94  E-value=2e-26  Score=146.11  Aligned_cols=95  Identities=23%  Similarity=0.429  Sum_probs=82.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE-------------------CCCCceEEecccccccCCCCCcceeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-------------------DEDHVAKLFDFSLAESIPDGETHIKDAIPIGI   62 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~-------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~   62 (110)
                      |++.||.|||   +.+++||||||.||++                   +.++.++++|||++........     ...++
T Consensus       131 qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt  202 (355)
T 2eu9_A          131 QLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT-----TIVAT  202 (355)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCC-----SSCSC
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccccc-----CCcCC
Confidence            7899999999   8999999999999999                   5678899999999876433221     23688


Q ss_pred             ccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           63 MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        63 ~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.|+|||.+.+..++.++|+||+|+++|++++|..||.+.+.
T Consensus       203 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  244 (355)
T 2eu9_A          203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN  244 (355)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             CcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence            899999999988899999999999999999999999987654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.94  E-value=8e-27  Score=148.28  Aligned_cols=97  Identities=20%  Similarity=0.269  Sum_probs=81.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC--ceEEecccccccCCCCCcc-----eecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.|++|||   +.+++||||||.||+++.++  .++++|||+++........     .......+++.|+|||.+.+.
T Consensus       159 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  235 (345)
T 2v62_A          159 RMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV  235 (345)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC
T ss_pred             HHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC
Confidence            7899999999   78999999999999998777  9999999999765322111     111233688899999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .++.++|+||+|+++|++++|..||.+
T Consensus       236 ~~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          236 ALSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            899999999999999999999999965

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.93  E-value=7.7e-27  Score=149.68  Aligned_cols=97  Identities=22%  Similarity=0.343  Sum_probs=76.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........   .....+++.|+|||.+.+..++.++|
T Consensus       135 qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~D  208 (371)
T 2xrw_A          135 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  208 (371)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccccccccc---cCCceecCCccCHHHhcCCCCCchHh
Confidence            7899999999   78999999999999999999999999999875533211   12235788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       209 iwslG~il~el~~g~~pf~~~~~  231 (371)
T 2xrw_A          209 IWSVGCIMGEMIKGGVLFPGTDH  231 (371)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999987654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1e-26  Score=146.82  Aligned_cols=97  Identities=22%  Similarity=0.414  Sum_probs=83.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC--CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|+.|||   +.+++||||||.||+++.  ++.++++|||++.........   ....+++.|+|||.+.+..++.+
T Consensus       110 qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  183 (321)
T 1tki_A          110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTA  183 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE---EEEESCGGGSCHHHHTTCEECHH
T ss_pred             HHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc---ccccCChhhcCcHHhcCCCCCch
Confidence            7899999999   799999999999999987  789999999998766443221   22358889999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|+++|++++|..||.+.+.
T Consensus       184 ~DiwslG~il~~ll~g~~pf~~~~~  208 (321)
T 1tki_A          184 TDMWSLGTLVYVLLSGINPFLAETN  208 (321)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             hhHHHHHHHHHHHHhCCCCCcCCCH
Confidence            9999999999999999999987654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.93  E-value=1.3e-26  Score=147.41  Aligned_cols=100  Identities=21%  Similarity=0.349  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC--cceecccccccccccccceeccC-CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTG-DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~-~~~~   78 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.......  .........+++.|+|||.+.+. .++.
T Consensus       132 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  208 (351)
T 3mi9_A          132 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP  208 (351)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCT
T ss_pred             HHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCc
Confidence            7899999999   7899999999999999999999999999987654221  11122233578899999988764 4789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       209 ~~DiwslG~il~ell~g~~pf~~~~~  234 (351)
T 3mi9_A          209 PIDLWGAGCIMAEMWTRSPIMQGNTE  234 (351)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HhHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            99999999999999999999987654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.93  E-value=8.3e-27  Score=147.36  Aligned_cols=98  Identities=26%  Similarity=0.568  Sum_probs=65.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.++   .++++|||++..........  ....+++.|+|||.+....++.
T Consensus       114 qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~  188 (325)
T 3kn6_A          114 KLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAPELLNQNGYDE  188 (325)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------CCCCH
T ss_pred             HHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcc--cccCCCcCccCHHHhcCCCCCC
Confidence            7899999999   79999999999999997665   79999999987654332221  2235788999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       189 ~~DiwslG~il~~ll~g~~pf~~~~~  214 (325)
T 3kn6_A          189 SCDLWSLGVILYTMLSGQVPFQSHDR  214 (325)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTC----
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            99999999999999999999976543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.93  E-value=1.6e-26  Score=152.67  Aligned_cols=100  Identities=20%  Similarity=0.341  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE---CCCCceEEecccccccCCCCCcc-----eecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~   73 (110)
                      ||+.||.|||   +.+++||||||.||++   +.++.++|+|||+++........     .......|++.|++||.+.+
T Consensus       111 qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  187 (483)
T 3sv0_A          111 QMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG  187 (483)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcC
Confidence            7899999999   7999999999999999   57889999999999765433221     11223468899999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ..++.++|+||||+++||+++|..||.+...
T Consensus       188 ~~~s~~sDvwSlGvil~elltG~~Pf~~~~~  218 (483)
T 3sv0_A          188 IEQSRRDDLESLGYVLMYFLRGSLPWQGLKA  218 (483)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence            9999999999999999999999999987554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.93  E-value=1.2e-27  Score=153.25  Aligned_cols=100  Identities=26%  Similarity=0.372  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.||.|||   +.+++||||||.||+++.++   .++++|||+++...............+++.|+|||.+....++.
T Consensus       189 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  265 (367)
T 3l9p_A          189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS  265 (367)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCc
Confidence            7889999999   78999999999999998554   59999999986542222112222335778899999999889999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      ++|+||+|++++|+++ |..||.+.+.
T Consensus       266 ~~DvwslG~il~ellt~g~~pf~~~~~  292 (367)
T 3l9p_A          266 KTDTWSFGVLLWEIFSLGYMPYPSKSN  292 (367)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999998 9999987654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=9.6e-27  Score=148.55  Aligned_cols=99  Identities=33%  Similarity=0.523  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC--CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG--DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||+++........ ......|++.|+|||.+.+.  .++.+
T Consensus       167 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  242 (355)
T 1vzo_A          167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKA  242 (355)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGG-GGCGGGSCCTTCCHHHHTTCC---CTH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCC-cccCcccCcCccChhhhcCCCCCCCch
Confidence            7899999999   789999999999999999999999999998765432221 12233588999999999753  46789


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|+++|++++|..||...+.
T Consensus       243 ~DvwslG~il~ell~g~~pf~~~~~  267 (355)
T 1vzo_A          243 VDWWSLGVLMYELLTGASPFTVDGE  267 (355)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSCTTS
T ss_pred             hhHHHHHHHHHHHHHCCCCCccCCc
Confidence            9999999999999999999976543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=1.9e-26  Score=145.42  Aligned_cols=95  Identities=21%  Similarity=0.433  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-------------------CCceEEecccccccCCCCCcceeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------DHVAKLFDFSLAESIPDGETHIKDAIPIGI   62 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~   62 (110)
                      |++.|+.|||   +.+++||||||+||+++.                   ++.++++|||++.......     ....++
T Consensus       126 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt  197 (339)
T 1z57_A          126 QICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHH-----STLVST  197 (339)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCC-----CSSCSC
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccc-----ccccCC
Confidence            7899999999   789999999999999987                   5679999999987643322     123578


Q ss_pred             ccccccceeccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           63 MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        63 ~~~~~pe~~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+.+.
T Consensus       198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  239 (339)
T 1z57_A          198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS  239 (339)
T ss_dssp             GGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred             ccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence            899999999988899999999999999999999999987654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.93  E-value=1.1e-26  Score=150.38  Aligned_cols=100  Identities=19%  Similarity=0.335  Sum_probs=77.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE----CCCCceEEecccccccCCCCCc-ceecccccccccccccceeccC-C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGET-HIKDAIPIGIMGFVATEYVTTG-D   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~-~   75 (110)
                      |++.||.|||   +.+++||||||.||++    +.++.++++|||++........ ........+++.|+|||++.+. .
T Consensus       136 qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  212 (405)
T 3rgf_A          136 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  212 (405)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCS
T ss_pred             HHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCc
Confidence            7899999999   7899999999999999    6678999999999976543211 1122233688899999999874 4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|+++|++++|..||.+.+.
T Consensus       213 ~~~~~DiwSlG~il~ell~g~~pf~~~~~  241 (405)
T 3rgf_A          213 YTKAIDIWAIGCIFAELLTSEPIFHCRQE  241 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             ccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence            89999999999999999999999976543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.93  E-value=2.6e-26  Score=142.85  Aligned_cols=93  Identities=16%  Similarity=0.321  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++..........  ....+++.|+|||.+.+.. ++.++
T Consensus       109 ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  183 (292)
T 3o0g_A          109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC--CSCCSCGGGCCHHHHTTCSCCCTHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc--cCCccccCCcChHHHcCCCCcCchH
Confidence            7899999999   7899999999999999999999999999987654322221  2235788999999987765 78999


Q ss_pred             hHHHHHHHHHHHHhCCCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~   99 (110)
                      |+||+|++++++++|..||
T Consensus       184 DiwslG~il~~l~~~~~p~  202 (292)
T 3o0g_A          184 DMWSAGCIFAELANAGRPL  202 (292)
T ss_dssp             HHHHHHHHHHHHTTTSCCS
T ss_pred             HHHHHHHHHHHHHHcCCCC
Confidence            9999999999999887764

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.93  E-value=1.7e-26  Score=144.80  Aligned_cols=101  Identities=24%  Similarity=0.389  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|++||.+....++.++|
T Consensus       155 qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  231 (313)
T 3brb_A          155 DIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSD  231 (313)
T ss_dssp             HHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhh
Confidence            7889999999   8999999999999999999999999999987654433222223335677899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|++++++++ |..||.+.+..
T Consensus       232 i~slG~il~el~~~g~~p~~~~~~~  256 (313)
T 3brb_A          232 VWAFGVTMWEIATRGMTPYPGVQNH  256 (313)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             hHHHHHHHHHHHhcCCCCCccCCHH
Confidence            9999999999999 88999776543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=1.9e-26  Score=148.35  Aligned_cols=98  Identities=24%  Similarity=0.384  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      |++.|+.|||   +.+++||||||.||+++ .++.++++|||+++........   ....+++.|+|||.+.+.. ++.+
T Consensus       149 qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~  222 (383)
T 3eb0_A          149 QLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS---VAYICSRFYRAPELMLGATEYTPS  222 (383)
T ss_dssp             HHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC---CCCCCCSSCCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC---cCcccCCCccCHHHhcCCCCCCcc
Confidence            7899999999   89999999999999997 5789999999999865433222   1225788899999987654 8999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+|++++++++|+.||.+.+..
T Consensus       223 ~DiwslG~il~ell~g~~pf~~~~~~  248 (383)
T 3eb0_A          223 IDLWSIGCVFGELILGKPLFSGETSI  248 (383)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hhhhhHHHHHHHHHhCCCCCCCCChH
Confidence            99999999999999999999877644

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.93  E-value=9.9e-27  Score=145.78  Aligned_cols=100  Identities=26%  Similarity=0.443  Sum_probs=85.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       156 qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  232 (316)
T 2xir_A          156 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  232 (316)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhH
Confidence            7899999999   7899999999999999999999999999987665444333333445778899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       233 i~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          233 VWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             HHHHHHHHHHHHhCCCCCCcccch
Confidence            9999999999998 9999976543

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.93  E-value=1.9e-26  Score=147.49  Aligned_cols=102  Identities=22%  Similarity=0.372  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceecc-CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTT-GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~-~~~~~~   79 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........... .....+++.|+|||.+.. ..++.+
T Consensus       136 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  212 (364)
T 3qyz_A          136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS  212 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTH
T ss_pred             HHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcc
Confidence            7899999999   78999999999999999999999999999876543221111 122368889999998754 447899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +|+||+|++++++++|..||.+.+..+
T Consensus       213 ~DiwslG~il~ell~g~~pf~~~~~~~  239 (364)
T 3qyz_A          213 IDIWSVGCILAEMLSNRPIFPGKHYLD  239 (364)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSGGG
T ss_pred             hhHHHHHHHHHHHHHCCCCCCCCChHH
Confidence            999999999999999999998776443

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.93  E-value=2.5e-26  Score=149.84  Aligned_cols=96  Identities=20%  Similarity=0.320  Sum_probs=75.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc--------------------eecccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--------------------IKDAIPIG   61 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------------~~~~~~~~   61 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.++++|||+++........                    .......+
T Consensus       137 qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  213 (432)
T 3n9x_A          137 NLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV  213 (432)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCC
T ss_pred             HHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCC
Confidence            7899999999   789999999999999999999999999999765432211                    11123468


Q ss_pred             ccccccccee-ccCCCCchhhHHHHHHHHHHHHhCCCCcc
Q 043407           62 IMGFVATEYV-TTGDYNEKCDVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        62 ~~~~~~pe~~-~~~~~~~~~d~~s~g~~~~~~~~g~~p~~  100 (110)
                      ++.|+|||++ ....++.++|+||+||+++|+++|..||.
T Consensus       214 t~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             CCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             CccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence            8999999986 45568999999999999999998555443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.93  E-value=1.4e-26  Score=145.01  Aligned_cols=100  Identities=22%  Similarity=0.413  Sum_probs=85.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       153 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  229 (313)
T 1t46_A          153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (313)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHH
Confidence            6889999999   7899999999999999999999999999987665444333333335677899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+...
T Consensus       230 i~slG~il~ellt~g~~p~~~~~~  253 (313)
T 1t46_A          230 VWSYGIFLWELFSLGSSPYPGMPV  253 (313)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             HHHHHHHHHHHHhCCCCCCCcccc
Confidence            9999999999998 9999977653

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.93  E-value=8.1e-27  Score=145.04  Aligned_cols=100  Identities=29%  Similarity=0.472  Sum_probs=74.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|++||.+.   ...++.
T Consensus       128 qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  204 (289)
T 3og7_A          128 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF  204 (289)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCH
T ss_pred             HHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCc
Confidence            6889999999   7899999999999999999999999999987554322222222335888999999886   556788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       205 ~~Di~slG~il~el~~g~~p~~~~~~  230 (289)
T 3og7_A          205 QSDVYAFGIVLYELMTGQLPYSNINN  230 (289)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             ccchHHHHHHHHHHHHCCCCccccch
Confidence            99999999999999999999976543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.93  E-value=4.6e-27  Score=154.13  Aligned_cols=99  Identities=29%  Similarity=0.479  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.+|++|||+++......... .....++..|+|||.+....++.++|
T Consensus       292 qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  367 (454)
T 1qcf_A          292 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA-REGAKFPIKWTAPEAINFGSFTIKSD  367 (454)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT-TCSSSSCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec-cCCCcccccccCHHHhccCCCCcHHH
Confidence            7899999999   7899999999999999999999999999987654321111 11123567899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+.+.
T Consensus       368 vwslG~~l~el~t~g~~P~~~~~~  391 (454)
T 1qcf_A          368 VWSFGILLMEIVTYGRIPYPGMSN  391 (454)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999 9999987654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.5e-26  Score=147.13  Aligned_cols=98  Identities=27%  Similarity=0.350  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........  .....+++.|+|||.+.+. .++.++
T Consensus       120 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~  194 (346)
T 1ua2_A          120 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA--YTHQVVTRWYRAPELLFGARMYGVGV  194 (346)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC--CCCSCCCCTTCCHHHHTTCSCCCHHH
T ss_pred             HHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCccc--CCcccccccccCchHhhCCCCCCchh
Confidence            6889999999   789999999999999999999999999998765432221  1223578899999998654 478999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       195 DiwslG~il~ell~g~~~~~~~~~  218 (346)
T 1ua2_A          195 DMWAVGCILAELLLRVPFLPGDSD  218 (346)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCCH
Confidence            999999999999999999987653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=2.1e-26  Score=150.88  Aligned_cols=96  Identities=26%  Similarity=0.445  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++.......     ...++..|+|||.+....++.++|
T Consensus       297 qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sD  368 (450)
T 1k9a_A          297 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  368 (450)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccccc-----CCCCCcceeCHHHhcCCCCCcHHH
Confidence            7899999999   79999999999999999999999999999875432211     114567899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+++ |..||.+.+..
T Consensus       369 vwslG~~l~el~t~g~~P~~~~~~~  393 (450)
T 1k9a_A          369 VWSFGILLWEIYSFGRVPYPRIPLK  393 (450)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTSCTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999998 99999876544

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.93  E-value=1.8e-26  Score=145.39  Aligned_cols=95  Identities=41%  Similarity=0.703  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCC---CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPR---PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.   +++|+||||.||+++.++.++++|||++........... ....+++.|+|||.+....++.
T Consensus       139 ~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~  214 (326)
T 3uim_A          139 GSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSE  214 (326)
T ss_dssp             HHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEE-CCCCSCGGGCCHHHHHHSEECH
T ss_pred             HHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccccc-ccccCCcCccCHHHhccCCCCc
Confidence            6889999999   56   999999999999999999999999999976644332222 2235889999999998888899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~  100 (110)
                      ++|+||+|++++++++|..||.
T Consensus       215 ~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          215 KTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cccchhHHHHHHHHHhCCCccc
Confidence            9999999999999999999995

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.93  E-value=2.2e-26  Score=148.15  Aligned_cols=102  Identities=22%  Similarity=0.303  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC-----cceecccccccccccccceecc--C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-----THIKDAIPIGIMGFVATEYVTT--G   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~~~~pe~~~~--~   74 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||.+.......     .........+++.|+|||++..  .
T Consensus       136 qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  212 (389)
T 3gni_B          136 GVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ  212 (389)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSS
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCC
Confidence            7899999999   7999999999999999999999999999875432111     1111122357888999999987  5


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      .++.++|+||+|++++++++|+.||.+.+..+
T Consensus       213 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  244 (389)
T 3gni_B          213 GYDAKSDIYSVGITACELANGHVPFKDMPATQ  244 (389)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT
T ss_pred             CCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            68899999999999999999999998765443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=4e-26  Score=147.34  Aligned_cols=97  Identities=26%  Similarity=0.392  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC--CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++.  .+.++++|||++.........   ....+++.|+|||++....++.+
T Consensus       157 qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  230 (387)
T 1kob_A          157 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV---KVTTATAEFAAPEIVDREPVGFY  230 (387)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE---EEECSSGGGCCHHHHTTCCBCHH
T ss_pred             HHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcce---eeeccCCCccCchhccCCCCCCc
Confidence            7899999999   789999999999999974  467999999999776543221   12258899999999998889999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|+++|++++|..||.+.+.
T Consensus       231 ~DiwSlG~il~elltg~~Pf~~~~~  255 (387)
T 1kob_A          231 TDMWAIGVLGYVLLSGLSPFAGEDD  255 (387)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             ccEeeHhHHHHHHHhCCCCCCCCCH
Confidence            9999999999999999999987653

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.93  E-value=3.7e-26  Score=144.94  Aligned_cols=95  Identities=25%  Similarity=0.433  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++.........   ....|++.|+|||.+.+..+ +.++
T Consensus       138 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~  211 (335)
T 3dls_A          138 QLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPEL  211 (335)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHH
T ss_pred             HHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCce---eccCCCccccChhhhcCCCCCCCcc
Confidence            7889999999   789999999999999999999999999998766443222   12358899999999988776 7889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|+++|++++|..||...
T Consensus       212 DiwslG~il~el~~g~~pf~~~  233 (335)
T 3dls_A          212 EMWSLGVTLYTLVFEENPFCEL  233 (335)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSG
T ss_pred             cchhHHHHHHHHHhCCCchhhH
Confidence            9999999999999999999653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.93  E-value=4.4e-27  Score=148.86  Aligned_cols=100  Identities=24%  Similarity=0.403  Sum_probs=83.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       182 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  258 (343)
T 1luf_A          182 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD  258 (343)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccc
Confidence            6889999999   7899999999999999999999999999987553322222222335778899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++|++++ |..||.+.+.
T Consensus       259 i~slG~il~el~t~g~~p~~~~~~  282 (343)
T 1luf_A          259 VWAYGVVLWEIFSYGLQPYYGMAH  282 (343)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             cHHHHHHHHHHHhcCCCcCCCCCh
Confidence            9999999999999 9999976643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.93  E-value=3.8e-26  Score=146.76  Aligned_cols=97  Identities=26%  Similarity=0.370  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE--CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.||.|||   +.+++||||||.||++  +.++.++++|||++.........   ....+++.|+|||.+....++.+
T Consensus       195 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  268 (373)
T 2x4f_A          195 QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL---KVNFGTPEFLAPEVVNYDFVSFP  268 (373)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC---CCCCSSCTTCCHHHHTTCBCCHH
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc---ccccCCCcEeChhhccCCCCCcH
Confidence            7899999999   7899999999999999  56788999999998766433221   22358899999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|++++++++|..||.+.+.
T Consensus       269 ~DiwslG~il~elltg~~pf~~~~~  293 (373)
T 2x4f_A          269 TDMWSVGVIAYMLLSGLSPFLGDND  293 (373)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999999999999999999987654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.93  E-value=1.9e-26  Score=145.89  Aligned_cols=100  Identities=26%  Similarity=0.400  Sum_probs=84.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       165 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  241 (334)
T 2pvf_A          165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  241 (334)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHH
Confidence            7889999999   7899999999999999999999999999987665433333333334677899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       242 i~slG~il~ellt~g~~p~~~~~~  265 (334)
T 2pvf_A          242 VWSFGVLMWEIFTLGGSPYPGIPV  265 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             HHHHHHHHHHHHhCCCCCcCcCCH
Confidence            9999999999999 9999977543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.93  E-value=3.9e-26  Score=143.42  Aligned_cols=92  Identities=26%  Similarity=0.373  Sum_probs=76.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++........   .....|++.|+|||++.+ .++.++|
T Consensus       165 qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~D  237 (311)
T 3p1a_A          165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGDPRYMAPELLQG-SYGTAAD  237 (311)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHH
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC---CcccCCCccccCHhHhcC-CCCchhh
Confidence            7899999999   78999999999999999999999999999876543221   122358889999998875 6899999


Q ss_pred             HHHHHHHHHHHHhCCCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~  100 (110)
                      +||+|++++|+++|..|+.
T Consensus       238 iwslG~il~el~~g~~~~~  256 (311)
T 3p1a_A          238 VFSLGLTILEVACNMELPH  256 (311)
T ss_dssp             HHHHHHHHHHHHHTCCCCS
T ss_pred             HHHHHHHHHHHHhCCCCCC
Confidence            9999999999999976554

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.93  E-value=8.3e-27  Score=147.27  Aligned_cols=100  Identities=25%  Similarity=0.414  Sum_probs=84.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+....++.++|
T Consensus       172 qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  248 (333)
T 2i1m_A          172 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD  248 (333)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---cCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHH
Confidence            6889999999   7899999999999999999999999999987554333222223335677899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+...
T Consensus       249 i~slG~il~el~t~g~~p~~~~~~  272 (333)
T 2i1m_A          249 VWSYGILLWEIFSLGLNPYPGILV  272 (333)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred             HHHHHHHHHHHHcCCCCCCcccch
Confidence            9999999999998 9999976543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.93  E-value=3.6e-26  Score=143.80  Aligned_cols=96  Identities=26%  Similarity=0.378  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE----CCCCceEEecccccccCCCCCcceecccccccccccccceec-----
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----   72 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----   72 (110)
                      |++.|+.|||   +.+++||||||.||++    +.++.++++|||++.........   ....+++.|+|||.+.     
T Consensus       120 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  193 (319)
T 4euu_A          120 DVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLR  193 (319)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHTSC
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCce---eecccCCCccCHHHhhhcccc
Confidence            7899999999   7899999999999998    77778999999999766543322   1235888999999886     


Q ss_pred             ---cCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           73 ---TGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        73 ---~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                         ...++.++|+||+|+++|++++|..||...+
T Consensus       194 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  227 (319)
T 4euu_A          194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (319)
T ss_dssp             CCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             ccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence               4667899999999999999999999997543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.93  E-value=1.8e-26  Score=145.75  Aligned_cols=96  Identities=17%  Similarity=0.345  Sum_probs=77.0

Q ss_pred             cHHHHHHHHhcCCCC---------CeEEcCCCCCceEECCCCceEEecccccccCCCCCc------ceeccccccccccc
Q 043407            2 EIANALAYLHVGFPR---------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------HIKDAIPIGIMGFV   66 (110)
Q Consensus         2 qi~~~l~~lh~~~~~---------~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~~~   66 (110)
                      |++.||.|||   +.         +++||||||+||+++.++.++++|||++........      ........|++.|+
T Consensus       119 qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~  195 (336)
T 3g2f_A          119 SVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM  195 (336)
T ss_dssp             HHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGC
T ss_pred             HHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCcccee
Confidence            7899999999   67         999999999999999999999999999976543211      11122335889999


Q ss_pred             ccceecc-------CCCCchhhHHHHHHHHHHHHhCCCCcc
Q 043407           67 ATEYVTT-------GDYNEKCDVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        67 ~pe~~~~-------~~~~~~~d~~s~g~~~~~~~~g~~p~~  100 (110)
                      |||.+.+       ..++.++|+||+|+++||+++|..||.
T Consensus       196 aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~  236 (336)
T 3g2f_A          196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF  236 (336)
T ss_dssp             CHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred             CchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence            9999876       235578999999999999999976653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.93  E-value=2.2e-26  Score=144.73  Aligned_cols=100  Identities=25%  Similarity=0.402  Sum_probs=84.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++................+++.|+|||.+.+..++.++|
T Consensus       146 qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (322)
T 1p4o_A          146 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  222 (322)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhh
Confidence            6889999999   7899999999999999999999999999987554333222233335677899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       223 i~slG~il~el~~~g~~p~~~~~~  246 (322)
T 1p4o_A          223 VWSFGVVLWEIATLAEQPYQGLSN  246 (322)
T ss_dssp             HHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred             HHHHHHHHHHHHhcCCCccccCCH
Confidence            9999999999999 8899976543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.93  E-value=2.9e-26  Score=143.54  Aligned_cols=99  Identities=20%  Similarity=0.346  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++..........  ....+++.|+|||.+.+ ..++.++
T Consensus       110 ~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  184 (311)
T 4agu_A          110 QTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY--DDEVATRWYRSPELLVGDTQYGPPV  184 (311)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHH
T ss_pred             HHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc--CCCcCCccccChHHHhcCCCCCcch
Confidence            6889999999   7899999999999999999999999999987654332221  12257888999999876 5578999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|++++++++|..||.+.+..
T Consensus       185 Di~slG~il~~l~~g~~p~~~~~~~  209 (311)
T 4agu_A          185 DVWAIGCVFAELLSGVPLWPGKSDV  209 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999876543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.93  E-value=1.2e-26  Score=143.73  Aligned_cols=100  Identities=25%  Similarity=0.394  Sum_probs=74.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... ......+++.|+|||.+....++.++|
T Consensus       124 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (281)
T 1mp8_A          124 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASD  199 (281)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccccc-ccccCCCcccccChhhcccCCCCCccC
Confidence            7889999999   789999999999999999999999999998765432211 112224567899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|++++++++ |..||.+.+..
T Consensus       200 i~slG~~l~ell~~g~~pf~~~~~~  224 (281)
T 1mp8_A          200 VWMFGVCMWEILMHGVKPFQGVKNN  224 (281)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred             chHHHHHHHHHHhcCCCCCCcCCHH
Confidence            9999999999996 99999876543

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.93  E-value=2.5e-26  Score=146.78  Aligned_cols=94  Identities=24%  Similarity=0.348  Sum_probs=77.9

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEEC------CCCceEEecccccccCCCCCcceecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFD------EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.||.|||   +. +++||||||.||+++      ..+.++++|||++........     ...+++.|+|||.+.+.
T Consensus       139 qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~  210 (373)
T 1q8y_A          139 QLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-----NSIQTREYRSPEVLLGA  210 (373)
T ss_dssp             HHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCC-----SCCSCGGGCCHHHHHTC
T ss_pred             HHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCC-----CCCCCccccCcHHHhCC
Confidence            7899999999   77 999999999999994      344799999999876543221     22578899999999998


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++.++|+||+|+++|++++|..||.+.+
T Consensus       211 ~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          211 PWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence            89999999999999999999999998665

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.93  E-value=7.1e-26  Score=141.59  Aligned_cols=99  Identities=29%  Similarity=0.480  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|+|||.+.+ .++.++|
T Consensus       141 ~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~D  216 (307)
T 2nru_A          141 GAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSD  216 (307)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHH
T ss_pred             HHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccch
Confidence            6889999999   78999999999999999999999999999876554333333333468889999998754 4788999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.....
T Consensus       217 v~slG~il~~l~~g~~p~~~~~~  239 (307)
T 2nru_A          217 IYSFGVVLLEIITGLPAVDEHRE  239 (307)
T ss_dssp             HHHHHHHHHHHHHCCCSBCTTBS
T ss_pred             hHHHHHHHHHHHHCCCCcccCcc
Confidence            99999999999999999976554

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.93  E-value=7.7e-26  Score=149.22  Aligned_cols=97  Identities=29%  Similarity=0.486  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++........   .....|++.|+|||.+.+..+ +.++
T Consensus       124 qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~  197 (476)
T 2y94_A          124 QILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---LRTSCGSPNYAAPEVISGRLYAGPEV  197 (476)
T ss_dssp             HHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC---BCCCCSCSTTCCHHHHTTCCBCSHHH
T ss_pred             HHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc---ccccCCCcCeEChhhccCCCCCCCcc
Confidence            7899999999   89999999999999999999999999999876644322   123368899999999987765 6889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|+++|++++|..||.+.+.
T Consensus       198 DiwSlGvil~elltG~~Pf~~~~~  221 (476)
T 2y94_A          198 DIWSSGVILYALLCGTLPFDDDHV  221 (476)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSS
T ss_pred             eehhhHHHHHHHhhCCCCCCCCCH
Confidence            999999999999999999987653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.93  E-value=5e-26  Score=140.75  Aligned_cols=96  Identities=26%  Similarity=0.473  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........    ....+++.|+|||.+.+..++.++|
T Consensus       117 qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~D  189 (279)
T 3fdn_A          117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMHDEKVD  189 (279)
T ss_dssp             HHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccc----cccCCCCCccCHhHhccCCCCccch
Confidence            6889999999   89999999999999999999999999998754433221    1235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       190 i~slG~il~~l~~g~~p~~~~~~  212 (279)
T 3fdn_A          190 LWSLGVLCYEFLVGKPPFEANTY  212 (279)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             hHhHHHHHHHHHHCCCCCCCCcH
Confidence            99999999999999999987654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.93  E-value=3.5e-26  Score=145.77  Aligned_cols=94  Identities=28%  Similarity=0.417  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec---cCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~~~~   78 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++.......      ...+++.|+|||.+.   ...++.
T Consensus       162 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~  232 (348)
T 1u5q_A          162 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDG  232 (348)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC------CCCSCGGGCCHHHHHTTSSCCBCT
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC------cccCCcceeCHhhhccccCCCCCc
Confidence            6889999999   7899999999999999999999999999987654321      225888999999985   456789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++|+++|..||.+.+.
T Consensus       233 ~~DiwslG~il~ell~g~~p~~~~~~  258 (348)
T 1u5q_A          233 KVDVWSLGITCIELAERKPPLFNMNA  258 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence            99999999999999999999976543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=2e-26  Score=145.61  Aligned_cols=100  Identities=22%  Similarity=0.364  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++.......... ......+++.|+|||.+....++.++
T Consensus       159 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  235 (325)
T 3kul_A          159 GVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSAS  235 (325)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHH
Confidence            6889999999   7999999999999999999999999999998664432211 11222356679999999888899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|+++|++++ |..||.+.+.
T Consensus       236 Di~slG~il~ell~~g~~p~~~~~~  260 (325)
T 3kul_A          236 DVWSFGVVMWEVLAYGERPYWNMTN  260 (325)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTSCH
T ss_pred             HHHHHHHHHHHHHcCCCCCcccCCH
Confidence            99999999999999 9999976543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=3.6e-26  Score=144.87  Aligned_cols=100  Identities=34%  Similarity=0.472  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC--ceEEecccccccCCCC--Ccceecccccccccccccceecc--CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDG--ETHIKDAIPIGIMGFVATEYVTT--GD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~~~--~~   75 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++  .++++|||++......  ..........+++.|+|||.+..  ..
T Consensus       176 qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  252 (345)
T 3hko_A          176 QIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES  252 (345)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC
T ss_pred             HHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC
Confidence            7889999999   78999999999999998766  8999999998754321  11112223368889999999865  56


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|+++|++++|..||.+.+.
T Consensus       253 ~~~~~DiwslG~il~el~~g~~pf~~~~~  281 (345)
T 3hko_A          253 YGPKCDAWSAGVLLHLLLMGAVPFPGVND  281 (345)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCh
Confidence            78999999999999999999999976654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.93  E-value=5.4e-26  Score=140.43  Aligned_cols=98  Identities=24%  Similarity=0.452  Sum_probs=64.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....+++.|+|||.+....++.++|
T Consensus       120 qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  194 (278)
T 3cok_A          120 QIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGLESD  194 (278)
T ss_dssp             HHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------------------------------CTH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCc--ceeccCCCCcCCcchhcCCCCCchhh
Confidence            7899999999   789999999999999999999999999998765432221  12235788999999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       195 i~slG~il~~l~~g~~p~~~~~~  217 (278)
T 3cok_A          195 VWSLGCMFYTLLIGRPPFDTDTV  217 (278)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCCSC
T ss_pred             HHHHHHHHHHHHhCCCCCCChhH
Confidence            99999999999999999976654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.93  E-value=4.1e-26  Score=146.32  Aligned_cols=95  Identities=24%  Similarity=0.433  Sum_probs=79.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.......     ....+++.|+|||.+.. ..++.++
T Consensus       152 qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  223 (371)
T 4exu_A          152 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTV  223 (371)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTH
T ss_pred             HHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCc-----CCcccCccccCHHHhcCCCCCCcHH
Confidence            7899999999   7899999999999999999999999999987543321     12257889999999877 6688999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       224 DiwslG~il~el~~g~~pf~~~~~  247 (371)
T 4exu_A          224 DIWSVGCIMAEMLTGKTLFKGKDY  247 (371)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCh
Confidence            999999999999999999987653

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.93  E-value=4.1e-26  Score=140.70  Aligned_cols=100  Identities=26%  Similarity=0.419  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||.+................+++.|++||.+....+ +.++
T Consensus       113 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  189 (276)
T 2yex_A          113 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  189 (276)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHH
T ss_pred             HHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcc
Confidence            7889999999   79999999999999999999999999999876533222222223357889999999887664 6789


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||...+.
T Consensus       190 Di~slG~il~~l~~g~~p~~~~~~  213 (276)
T 2yex_A          190 DVWSCGIVLTAMLAGELPWDQPSD  213 (276)
T ss_dssp             HHHHHHHHHHHHHHSSCCCSCSCT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCch
Confidence            999999999999999999976554

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.93  E-value=2.6e-26  Score=146.23  Aligned_cols=99  Identities=19%  Similarity=0.249  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC--ceEEecccccccCCCCCcc-----eecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~--~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.||.|||   +.+++||||||.||+++.++  .++++|||+++........     .......+++.|+|||.+.+.
T Consensus       167 qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  243 (352)
T 2jii_A          167 RLLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC  243 (352)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC
Confidence            7899999999   78999999999999999888  8999999998765432111     011223688899999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .++.++|+||+|+++|++++|+.||.+..
T Consensus       244 ~~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            89999999999999999999999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.93  E-value=5.7e-26  Score=142.95  Aligned_cols=96  Identities=28%  Similarity=0.516  Sum_probs=80.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc----------eeccccccccccccccee
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----------IKDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------~~~~~~~~~~~~~~pe~~   71 (110)
                      |++.|++|||   +.+++||||||.||+++.++.++++|||++.........          .......+++.|+|||.+
T Consensus       172 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  248 (332)
T 3qd2_B          172 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI  248 (332)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHH
T ss_pred             HHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHh
Confidence            7899999999   799999999999999999999999999998766543211          111223588999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcc
Q 043407           72 TTGDYNEKCDVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        72 ~~~~~~~~~d~~s~g~~~~~~~~g~~p~~  100 (110)
                      .+..++.++|+||+|++++++++|..|+.
T Consensus       249 ~~~~~~~~~Di~slG~il~el~~~~~~~~  277 (332)
T 3qd2_B          249 HGNNYSHKVDIFSLGLILFELLYSFSTQM  277 (332)
T ss_dssp             HCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence            98899999999999999999999887763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=2.2e-26  Score=152.28  Aligned_cols=100  Identities=26%  Similarity=0.415  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.+|++|||+++........ ......++..|+|||.+....++.++|
T Consensus       326 qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sD  401 (495)
T 1opk_A          326 QISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSD  401 (495)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE-CCTTCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee-ecCCCcCCcceeCHhHHhcCCCCcHHh
Confidence            7899999999   799999999999999999999999999998765433221 112223567899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+++ |..||.+.+..
T Consensus       402 vwSlG~~l~el~t~g~~p~~~~~~~  426 (495)
T 1opk_A          402 VWAFGVLLWEIATYGMSPYPGIDLS  426 (495)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999 99999876543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.93  E-value=8.5e-26  Score=142.27  Aligned_cols=97  Identities=31%  Similarity=0.484  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC----ceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++    .++++|||++.........   ....+++.|+|||.+....++
T Consensus       123 qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  196 (321)
T 2a2a_A          123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLG  196 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC---CCCCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc---cccCCCCCccCcccccCCCCC
Confidence            7899999999   78999999999999998887    7999999998765443221   223588899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|++++++++|..||.+.+.
T Consensus       197 ~~~Di~slG~il~~l~~g~~pf~~~~~  223 (321)
T 2a2a_A          197 LEADMWSIGVITYILLSGASPFLGDTK  223 (321)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             CccccHHHHHHHHHHHHCCCCCCCCCH
Confidence            999999999999999999999977653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=3.5e-26  Score=146.93  Aligned_cols=101  Identities=28%  Similarity=0.420  Sum_probs=75.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||+++.........  ......+++.|+|||.+....++.+
T Consensus       200 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  276 (373)
T 3c1x_A          200 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK  276 (373)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcH
Confidence            7899999999   7899999999999999999999999999987553321111  1122246678999999998899999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +|+||+|+++||+++ |..||.+.+..
T Consensus       277 ~DvwSlG~il~ellt~~~~p~~~~~~~  303 (373)
T 3c1x_A          277 SDVWSFGVLLWELMTRGAPPYPDVNTF  303 (373)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSCTTSCSS
T ss_pred             HHHHHHHHHHHHHHhCcCCCCCCCCHH
Confidence            999999999999999 77888766543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.93  E-value=4e-26  Score=144.26  Aligned_cols=98  Identities=24%  Similarity=0.450  Sum_probs=78.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++..........  ....+++.|++||.+.+. .++.++
T Consensus       132 qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  206 (331)
T 4aaa_A          132 QIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--DDEVATRWYRAPELLVGDVKYGKAV  206 (331)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHH
T ss_pred             HHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc--CCCcCCccccCcccccCCCCcchHH
Confidence            7889999999   7899999999999999999999999999987654322221  123578899999998765 678999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       207 Di~slG~il~~l~~g~~pf~~~~~  230 (331)
T 4aaa_A          207 DVWAIGCLVTEMFMGEPLFPGDSD  230 (331)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCc
Confidence            999999999999999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.93  E-value=8.2e-26  Score=143.60  Aligned_cols=99  Identities=22%  Similarity=0.343  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--------ecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--------KDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||++..........        ......+++.|+|||.+..
T Consensus       120 qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (353)
T 2b9h_A          120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT  196 (353)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc
Confidence            7899999999   7899999999999999999999999999987654321111        1112357889999998765


Q ss_pred             -CCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           74 -GDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        74 -~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                       ..++.++|+||+|++++++++|..||.+.+
T Consensus       197 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  227 (353)
T 2b9h_A          197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRD  227 (353)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence             668899999999999999999999998765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=1.7e-26  Score=151.36  Aligned_cols=99  Identities=32%  Similarity=0.437  Sum_probs=79.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++.......... ....++..|+|||.+....++.++|
T Consensus       288 qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sD  363 (452)
T 1fmk_A          288 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  363 (452)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc-cCCcccccccCHhHHhcCCCCcccc
Confidence            7899999999   79999999999999999999999999999876543221111 1223567899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+.+.
T Consensus       364 vwslG~~l~el~t~g~~P~~~~~~  387 (452)
T 1fmk_A          364 VWSFGILLTELTTKGRVPYPGMVN  387 (452)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999 9999987654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.93  E-value=5.8e-26  Score=144.71  Aligned_cols=97  Identities=27%  Similarity=0.473  Sum_probs=75.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.   ++.++++|||++........   .....+++.|+|||.+.+..++.
T Consensus       156 qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  229 (349)
T 2w4o_A          156 QILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MKTVCGTPGYCAPEILRGCAYGP  229 (349)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCT
T ss_pred             HHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc---cccccCCCCccCHHHhcCCCCCc
Confidence            7899999999   789999999999999975   78999999999875533211   12235888999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||.....
T Consensus       230 ~~DiwslG~il~ell~g~~pf~~~~~  255 (349)
T 2w4o_A          230 EVDMWSVGIITYILLCGFEPFYDERG  255 (349)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            99999999999999999999976543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=139.85  Aligned_cols=100  Identities=26%  Similarity=0.322  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC--Cch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY--NEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~--~~~   79 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++................+++.|++||.+.+...  +.+
T Consensus       117 qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  193 (305)
T 2wtk_C          117 QLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFK  193 (305)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHH
T ss_pred             HHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcch
Confidence            7899999999   78999999999999999999999999999876543322223333468889999999876543  678


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|++++++++|..||.+.+.
T Consensus       194 ~Di~slG~il~~l~~g~~p~~~~~~  218 (305)
T 2wtk_C          194 VDIWSAGVTLYNITTGLYPFEGDNI  218 (305)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCchH
Confidence            9999999999999999999987543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.93  E-value=6e-26  Score=143.37  Aligned_cols=97  Identities=22%  Similarity=0.358  Sum_probs=81.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.||+|||   +.+++||||||.||+++.   ++.++++|||++.........   ....+++.|+|||.+....++.
T Consensus       139 ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~  212 (327)
T 3lm5_A          139 QILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL---REIMGTPEYLAPEILNYDPITT  212 (327)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccc---ccccCCcCccCCeeecCCCCCc
Confidence            7899999999   789999999999999987   789999999998765433221   1235888999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       213 ~~DiwslG~il~~ll~g~~pf~~~~~  238 (327)
T 3lm5_A          213 ATDMWNIGIIAYMLLTHTSPFVGEDN  238 (327)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            99999999999999999999977654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.7e-25  Score=141.21  Aligned_cols=91  Identities=19%  Similarity=0.349  Sum_probs=73.2

Q ss_pred             cHHHHHHHHhcCCCC--------CeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--eccccccccccccccee
Q 043407            2 EIANALAYLHVGFPR--------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~--------~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~   71 (110)
                      |++.|+.|||   +.        +++||||||+||+++.++.++++|||++..........  ......|++.|+|||.+
T Consensus       142 ~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  218 (337)
T 3mdy_A          142 SSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL  218 (337)
T ss_dssp             HHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHH
T ss_pred             HHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhc
Confidence            6889999999   67        99999999999999999999999999987654322211  11233688999999999


Q ss_pred             ccCCCCch------hhHHHHHHHHHHHHhC
Q 043407           72 TTGDYNEK------CDVFSFGVLLLVLLTG   95 (110)
Q Consensus        72 ~~~~~~~~------~d~~s~g~~~~~~~~g   95 (110)
                      ........      +|+||+|+++||+++|
T Consensus       219 ~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          219 DESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             TTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccCCccccCccccchHHHHHHHHHHHhc
Confidence            77665544      8999999999999999

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.93  E-value=1.2e-25  Score=142.35  Aligned_cols=97  Identities=24%  Similarity=0.441  Sum_probs=83.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++..........  ....+++.|++||.+....++.++|
T Consensus       149 qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  223 (335)
T 2owb_A          149 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVD  223 (335)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHHTSCBCTHHH
T ss_pred             HHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc--cccCCCccccCHHHhccCCCCchhh
Confidence            7899999999   7899999999999999999999999999987654322221  2235888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|+++|++++|..||...+
T Consensus       224 i~slG~il~~l~~g~~pf~~~~  245 (335)
T 2owb_A          224 VWSIGCIMYTLLVGKPPFETSC  245 (335)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSS
T ss_pred             HHHHHHHHHHHHHCcCCCCCCC
Confidence            9999999999999999997654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=3.8e-26  Score=140.48  Aligned_cols=99  Identities=20%  Similarity=0.383  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........... ....+++.|+|||.+....++.++|
T Consensus       112 qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  187 (268)
T 3sxs_A          112 DVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS-VGTKFPVKWSAPEVFHYFKYSSKSD  187 (268)
T ss_dssp             HHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC-CSCCCCGGGCCHHHHHHSEEETTHH
T ss_pred             HHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc-cCCCcCcccCCHHHHhccCCchhhh
Confidence            6889999999   78999999999999999999999999999876544332222 2224566799999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||...+.
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~  211 (268)
T 3sxs_A          188 VWAFGILMWEVFSLGKMPYDLYTN  211 (268)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             hHHHHHHHHHHHcCCCCCccccCh
Confidence            9999999999998 9999976543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.92  E-value=2e-25  Score=138.29  Aligned_cols=96  Identities=25%  Similarity=0.420  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++........    ....+++.|++||.+.+..++.++|
T Consensus       122 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~D  194 (284)
T 2vgo_A          122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RTMCGTLDYLPPEMIEGKTHDEKVD  194 (284)
T ss_dssp             HHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB----CCCCSCGGGCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccccc----ccccCCCCcCCHHHhccCCCCcccc
Confidence            6889999999   89999999999999999999999999999865543221    2235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||...+.
T Consensus       195 i~slG~il~~l~~g~~pf~~~~~  217 (284)
T 2vgo_A          195 LWCAGVLCYEFLVGMPPFDSPSH  217 (284)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             hhhHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999976543

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.92  E-value=4.6e-26  Score=141.93  Aligned_cols=102  Identities=21%  Similarity=0.344  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCC-----CCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~-----~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.|+.|||...     +.+++||||||+||+++.++.++++|||++..........  ......+++.|+|||.+...
T Consensus       113 ~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  192 (301)
T 3q4u_A          113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET  192 (301)
T ss_dssp             HHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCc
Confidence            7899999999321     3689999999999999999999999999987544322221  11223688999999998776


Q ss_pred             ------CCCchhhHHHHHHHHHHHHhC----------CCCcccCC
Q 043407           75 ------DYNEKCDVFSFGVLLLVLLTG----------QKLYSIDE  103 (110)
Q Consensus        75 ------~~~~~~d~~s~g~~~~~~~~g----------~~p~~~~~  103 (110)
                            .++.++|+||+|+++||+++|          ..||....
T Consensus       193 ~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~  237 (301)
T 3q4u_A          193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV  237 (301)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence                  344689999999999999999          78886543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.92  E-value=3.1e-26  Score=143.73  Aligned_cols=102  Identities=29%  Similarity=0.537  Sum_probs=78.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc---eEEecccccccCCCCC-----cceecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGE-----THIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~---~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.   ++++|||++.......     .........+++.|+|||.+..
T Consensus       119 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (316)
T 2ac3_A          119 DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA  195 (316)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHH
T ss_pred             HHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhc
Confidence            7899999999   789999999999999987765   8999999986543211     1111122358889999999865


Q ss_pred             -----CCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           74 -----GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        74 -----~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                           ..++.++|+||+|++++++++|..||.+....+
T Consensus       196 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  233 (316)
T 2ac3_A          196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD  233 (316)
T ss_dssp             TSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC
T ss_pred             ccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc
Confidence                 446789999999999999999999998776544

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.92  E-value=3.1e-26  Score=145.74  Aligned_cols=96  Identities=29%  Similarity=0.562  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC----CceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|+.|||   +.+++||||||+||++...    +.++++|||++.........  .....+++.|+|||++....++
T Consensus       124 qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~  198 (342)
T 2qr7_A          124 TITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL--LMTPCYTANFVAPEVLERQGYD  198 (342)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCC--BCCSSCCSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCc--eeccCCCccccCHHHhcCCCCC
Confidence            6889999999   7899999999999998543    35999999998765433221  1233678899999999877788


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccC
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      .++|+||+|+++|++++|..||.+.
T Consensus       199 ~~~DiwslG~il~ell~g~~Pf~~~  223 (342)
T 2qr7_A          199 AACDIWSLGVLLYTMLTGYTPFANG  223 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             CccCeeeHhHHHHHHhcCCCCCCCC
Confidence            9999999999999999999999753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=141.18  Aligned_cols=96  Identities=29%  Similarity=0.508  Sum_probs=75.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc-eEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||.....+++||||||.||+++.++. ++++|||++........     ...+++.|+|||.+.+..++.++
T Consensus       110 qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~  184 (307)
T 2eva_A          110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-----NNKGSAAWMAPEVFEGSNYSEKC  184 (307)
T ss_dssp             HHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHH
T ss_pred             HHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc-----cCCCCCceEChhhhCCCCCCcHH
Confidence            7889999999321279999999999999988876 79999999865433211     22578899999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|+.||...
T Consensus       185 Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          185 DVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTTT
T ss_pred             HHHHHHHHHHHHHHCCCCchhh
Confidence            9999999999999999999754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.92  E-value=1.4e-25  Score=139.16  Aligned_cols=95  Identities=25%  Similarity=0.454  Sum_probs=78.9

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEECCCCc-----eEEecccccccCCCCCcceecccccccccccccceec--
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHV-----AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT--   72 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--   72 (110)
                      |++.|++|||   +.+  ++|+||||+||+++.++.     ++++|||++.......     ....+++.|+|||.+.  
T Consensus       130 ~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~g~~~y~aPE~~~~~  201 (287)
T 4f0f_A          130 DIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV-----SGLLGNFQWMAPETIGAE  201 (287)
T ss_dssp             HHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCE-----ECCCCCCTTSCGGGSSCS
T ss_pred             HHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccc-----cccCCCccccCchhhccC
Confidence            7889999999   788  999999999999987776     9999999986443321     2235888999999984  


Q ss_pred             cCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           73 TGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        73 ~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ...++.++|+||+|+++|++++|..||...+.
T Consensus       202 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  233 (287)
T 4f0f_A          202 EESYTEKADTYSFAMILYTILTGEGPFDEYSY  233 (287)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             CCCcCchhhHHHHHHHHHHHHcCCCCCccccc
Confidence            44568899999999999999999999976543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.92  E-value=9.9e-26  Score=142.11  Aligned_cols=99  Identities=19%  Similarity=0.310  Sum_probs=67.1

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEECCCCceEEecccccccCCCCCcce----------ecccccccccccccc
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----------KDAIPIGIMGFVATE   69 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~pe   69 (110)
                      |++.|+.|||   +.+  ++|+||||+||+++.++.++++|||++..........          ......+++.|++||
T Consensus       144 qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE  220 (337)
T 3ll6_A          144 QTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE  220 (337)
T ss_dssp             HHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------
T ss_pred             HHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChh
Confidence            7899999999   778  9999999999999999999999999987654322111          111235788899999


Q ss_pred             ee---ccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           70 YV---TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        70 ~~---~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      .+   ....++.++|+||+|+++|++++|..||....
T Consensus       221 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  257 (337)
T 3ll6_A          221 IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA  257 (337)
T ss_dssp             ---CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             hhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence            98   45567899999999999999999999997654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=1.9e-25  Score=139.06  Aligned_cols=98  Identities=23%  Similarity=0.432  Sum_probs=84.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++..........  ....+++.|++||.+....++.++|
T Consensus       123 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (294)
T 2rku_A          123 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVD  197 (294)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHTTSCBCTHHH
T ss_pred             HHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccc--ccccCCCCcCCcchhccCCCCchhh
Confidence            7899999999   7899999999999999999999999999987654322221  2235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       198 i~slG~~l~~l~~g~~p~~~~~~  220 (294)
T 2rku_A          198 VWSIGCIMYTLLVGKPPFETSCL  220 (294)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999976543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.92  E-value=1e-25  Score=141.80  Aligned_cols=97  Identities=21%  Similarity=0.329  Sum_probs=83.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......   ......+++.|++||.+....++.++|
T Consensus       128 qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  201 (326)
T 1blx_A          128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVD  201 (326)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC---CccccccccceeCHHHHhcCCCCcchh
Confidence            7889999999   7899999999999999999999999999986543221   112235788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+|++++++++|..||.+.+.
T Consensus       202 i~slG~il~~l~~g~~pf~~~~~  224 (326)
T 1blx_A          202 LWSVGCIFAEMFRRKPLFRGSSD  224 (326)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCH
Confidence            99999999999999999986543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.92  E-value=4.5e-26  Score=141.06  Aligned_cols=99  Identities=25%  Similarity=0.393  Sum_probs=80.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... ......+++.|+|||.+....++.++|
T Consensus       121 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  196 (281)
T 3cc6_A          121 QICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLPIKWMSPESINFRRFTTASD  196 (281)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccccccc-ccccCCCCcceeCchhhccCCCCchhc
Confidence            7899999999   799999999999999999999999999998765432221 112224667899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||...+.
T Consensus       197 i~slG~il~~llt~g~~p~~~~~~  220 (281)
T 3cc6_A          197 VWMFAVCMWEILSFGKQPFFWLEN  220 (281)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCG
T ss_pred             cHHHHHHHHHHHhCCCCCcccCCh
Confidence            9999999999998 9999975543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.92  E-value=9.9e-26  Score=143.52  Aligned_cols=95  Identities=24%  Similarity=0.433  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......     ....+++.|+|||.+.. ..++.++
T Consensus       134 qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  205 (353)
T 3coi_A          134 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTV  205 (353)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCc-----cccccCcCcCCHHHHhCcCCCCchh
Confidence            7899999999   7899999999999999999999999999986543221     12257889999998876 5678999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||.+.+.
T Consensus       206 Di~slG~il~el~~g~~pf~~~~~  229 (353)
T 3coi_A          206 DIWSVGCIMAEMLTGKTLFKGKDY  229 (353)
T ss_dssp             HHHHHHHHHHHHHHSSCSSBSSCH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=3.1e-26  Score=154.85  Aligned_cols=101  Identities=23%  Similarity=0.418  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++......... ......+++.|+|||.+....++.++
T Consensus       444 qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~s  520 (613)
T 2ozo_A          444 QVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS  520 (613)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHH
Confidence            7899999999   7899999999999999999999999999997654322111 11222355789999999989999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      |+||||+++||+++ |+.||.+.+..
T Consensus       521 DvwSlGv~l~ellt~G~~Pf~~~~~~  546 (613)
T 2ozo_A          521 DVWSYGVTMWEALSYGQKPYKKMKGP  546 (613)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCSH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence            99999999999998 99999876543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.92  E-value=2.9e-26  Score=144.94  Aligned_cols=98  Identities=20%  Similarity=0.343  Sum_probs=76.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-----CCCceEEecccccccCCCCCcceecccccccccccccceeccCC-
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-----EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-   75 (110)
                      |++.|+.|||   +.+++||||||.||+++     ..+.++++|||++..........  ....+++.|+|||.+.+.. 
T Consensus       140 ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~  214 (329)
T 3gbz_A          140 QLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWYRPPEILLGSRH  214 (329)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCC
T ss_pred             HHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccccc--CCCcCCccccCHHHhcCCCC
Confidence            7899999999   78999999999999994     44569999999987654322211  1225788999999997754 


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|++++++++|..||.+.+.
T Consensus       215 ~~~~~DiwslG~il~ell~g~~pf~~~~~  243 (329)
T 3gbz_A          215 YSTSVDIWSIACIWAEMLMKTPLFPGDSE  243 (329)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence            78999999999999999999999987654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.92  E-value=2.5e-25  Score=137.73  Aligned_cols=97  Identities=29%  Similarity=0.504  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc---eEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.   ++++|||++.........   ....+++.|+|||.+....++.
T Consensus       113 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~  186 (284)
T 3kk8_A          113 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLKKDPYSK  186 (284)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC---CCSCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc---cCCCCCcCCcCchhhcCCCCCc
Confidence            6889999999   789999999999999976654   999999998765433221   1235888999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       187 ~~Di~slG~~l~~l~~g~~pf~~~~~  212 (284)
T 3kk8_A          187 PVDIWACGVILYILLVGYPPFWDEDQ  212 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccchHHHHHHHHHHHHCCCCCCCCch
Confidence            99999999999999999999976543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.1e-25  Score=138.84  Aligned_cols=100  Identities=30%  Similarity=0.415  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc--ceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET--HIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++........  ........+++.|++||.+....++.+
T Consensus       132 qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  208 (298)
T 3pls_A          132 QVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK  208 (298)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChh
Confidence            7899999999   78999999999999999999999999999875433211  111122356778999999998889999


Q ss_pred             hhHHHHHHHHHHHHhC-CCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTG-QKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g-~~p~~~~~~  104 (110)
                      +|+||+|++++++++| ..||...+.
T Consensus       209 ~Di~slG~il~~l~~g~~~~~~~~~~  234 (298)
T 3pls_A          209 SDVWSFGVLLWELLTRGAPPYRHIDP  234 (298)
T ss_dssp             HHHHHHHHHHHHHHHTSCCTTTTSCG
T ss_pred             hchhhHHHHHHHHhhCCCCCCccCCH
Confidence            9999999999999995 455554443

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=2.5e-26  Score=141.45  Aligned_cols=99  Identities=22%  Similarity=0.413  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||+||+++.++.++++|||++......... ......+++.|+|||.+....++.++|
T Consensus       114 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (269)
T 4hcu_A          114 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSD  189 (269)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccc-cccCcccccccCCHHHhcCCCCCchhh
Confidence            6889999999   799999999999999999999999999998755432211 111224566899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       190 i~slG~~l~~ll~~g~~p~~~~~~  213 (269)
T 4hcu_A          190 VWSFGVLMWEVFSEGKIPYENRSN  213 (269)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             hHHHHHHHHHHhcCCCCCCCCCCH
Confidence            9999999999999 9999976644

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=9.3e-26  Score=144.36  Aligned_cols=97  Identities=27%  Similarity=0.461  Sum_probs=72.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc--eEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.  ++++|||+++.......   .....|++.|+|||.+.+..+..+
T Consensus       124 ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~  197 (361)
T 3uc3_A          124 QLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKSTVGTPAYIAPEVLLRQEYDGK  197 (361)
T ss_dssp             HHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC---CCCCcCCCCcCChhhhcCCCCCCC
Confidence            7899999999   799999999999999987665  99999999864322211   122358899999999988777655


Q ss_pred             -hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 -CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 -~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                       +|+||+|+++|++++|..||.+.+.
T Consensus       198 ~~DiwslG~il~ell~g~~Pf~~~~~  223 (361)
T 3uc3_A          198 IADVWSCGVTLYVMLVGAYPFEDPEE  223 (361)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCC----
T ss_pred             eeeeehhHHHHHHHHhCCCCCCCCcc
Confidence             8999999999999999999987544

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.92  E-value=2.6e-25  Score=141.60  Aligned_cols=99  Identities=22%  Similarity=0.421  Sum_probs=82.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      |++.|+.|||.. +.+++||||||.||+++. ++.++++|||++.........   ....+++.|+|||.+.+.. ++.+
T Consensus       137 qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~  212 (360)
T 3e3p_A          137 QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN---VAYICSRYYRAPELIFGNQHYTTA  212 (360)
T ss_dssp             HHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCC---CSTTSCGGGCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCc---ccccCCcceeCHHHHcCCCCCCcH
Confidence            688999999932 478999999999999986 899999999998765443222   1235788999999986654 7899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +|+||+|+++|++++|..||.+.+.
T Consensus       213 ~Di~slG~il~ell~g~~pf~~~~~  237 (360)
T 3e3p_A          213 VDIWSVGCIFAEMMLGEPIFRGDNS  237 (360)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCCCh
Confidence            9999999999999999999987654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.92  E-value=2.7e-25  Score=140.10  Aligned_cols=94  Identities=24%  Similarity=0.434  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcceecccccccccccccceecc-CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~   79 (110)
                      |++.|+.|||   +.+++||||||.||+++.++ .++++|||++.........   ....+++.|++||.+.. ..++.+
T Consensus       138 qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  211 (330)
T 3nsz_A          138 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYDYS  211 (330)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCC---CSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCcc---ccccccccccChhhhcCCCcCCch
Confidence            7899999999   79999999999999999776 8999999999765433221   22357888999999876 568899


Q ss_pred             hhHHHHHHHHHHHHhCCCCccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +|+||+|++++++++|..||..
T Consensus       212 ~DiwslG~il~~ll~g~~p~~~  233 (330)
T 3nsz_A          212 LDMWSLGCMLASMIFRKEPFFH  233 (330)
T ss_dssp             HHHHHHHHHHHHHHHTCSSSSC
T ss_pred             hhHHHHHHHHHHHHhCCCCccc
Confidence            9999999999999999999843

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.92  E-value=1.5e-25  Score=139.60  Aligned_cols=101  Identities=29%  Similarity=0.420  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc--eecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.........  .......+++.|++||.+.+..++.+
T Consensus       136 ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  212 (298)
T 3f66_A          136 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK  212 (298)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChH
Confidence            7899999999   789999999999999999999999999998765432211  11222346678999999998889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +|+||+|++++++++ +..||.+.+..
T Consensus       213 ~Di~slG~il~~l~~~~~~~~~~~~~~  239 (298)
T 3f66_A          213 SDVWSFGVLLWELMTRGAPPYPDVNTF  239 (298)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTSCTT
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCHH
Confidence            999999999999999 66777665543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=2.8e-26  Score=155.54  Aligned_cols=101  Identities=25%  Similarity=0.407  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.++++|||+++......... ......+++.|+|||.+....++.++
T Consensus       477 qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~s  553 (635)
T 4fl3_A          477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS  553 (635)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHH
Confidence            7899999999   7899999999999999999999999999987664332211 11222456789999999998999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      |+||+|+++||+++ |+.||.+.+..
T Consensus       554 DvwSlGv~l~ellt~G~~Pf~~~~~~  579 (635)
T 4fl3_A          554 DVWSFGVLMWEAFSYGQKPYRGMKGS  579 (635)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999998 99999876543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.92  E-value=1.1e-25  Score=147.04  Aligned_cols=99  Identities=24%  Similarity=0.438  Sum_probs=76.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-------------CceEEecccccccCCCCCcce--eccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-------------HVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFV   66 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-------------~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~   66 (110)
                      |++.||.|||   +.+++||||||.||+++.+             ..++++|||++..........  ......|++.|+
T Consensus       123 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~  199 (434)
T 2rio_A          123 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWR  199 (434)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTS
T ss_pred             HHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCcc
Confidence            7899999999   7899999999999999654             479999999998765432211  112336889999


Q ss_pred             ccceecc-------CCCCchhhHHHHHHHHHHHHh-CCCCcccCC
Q 043407           67 ATEYVTT-------GDYNEKCDVFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        67 ~pe~~~~-------~~~~~~~d~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      |||++.+       ..++.++|+||+|++++|+++ |..||....
T Consensus       200 aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~  244 (434)
T 2rio_A          200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY  244 (434)
T ss_dssp             CHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred             CHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence            9999865       567899999999999999998 999997543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.92  E-value=5e-26  Score=140.91  Aligned_cols=99  Identities=20%  Similarity=0.400  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... ......+++.|++||.+....++.++|
T Consensus       128 qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (283)
T 3gen_A          128 DVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSD  203 (283)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH-STTSTTSCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccccc-cccCCccCcccCCHHHhccCCCCchhh
Confidence            7889999999   789999999999999999999999999998765432211 111224567799999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||...+.
T Consensus       204 v~slG~~l~~l~t~g~~p~~~~~~  227 (283)
T 3gen_A          204 IWAFGVLMWEIYSLGKMPYERFTN  227 (283)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             HHHHHHHHHHHHhCCCCCccccCh
Confidence            9999999999998 9999976543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.92  E-value=2.8e-25  Score=138.74  Aligned_cols=97  Identities=28%  Similarity=0.454  Sum_probs=83.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....+++.|++||.+....++.++|
T Consensus       127 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  201 (303)
T 3a7i_A          127 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDSKAD  201 (303)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC--BCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccccc--cCccCCCcCccCHHHHhcCCCCchhh
Confidence            6889999999   789999999999999999999999999998765433211  12235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       202 i~slG~il~~l~~g~~p~~~~~  223 (303)
T 3a7i_A          202 IWSLGITAIELARGEPPHSELH  223 (303)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSC
T ss_pred             hHHHHHHHHHHccCCCCCCCcC
Confidence            9999999999999999997654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.92  E-value=6e-26  Score=145.81  Aligned_cols=100  Identities=21%  Similarity=0.365  Sum_probs=72.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.||.|||   +.+++||||||.||+++.++.++++|||++.......... ......++..|+|||.+....++.++
T Consensus       155 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (373)
T 2qol_A          155 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS  231 (373)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchh
Confidence            7889999999   7899999999999999999999999999987654322111 11111345679999999988999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|+++||+++ |..||...+.
T Consensus       232 Dv~SlG~il~ellt~g~~P~~~~~~  256 (373)
T 2qol_A          232 DVWSYGIVLWEVMSYGERPYWEMSN  256 (373)
T ss_dssp             HHHHHHHHHHHHHTTC-CTTTTCCH
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999998 9999976543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.92  E-value=1.6e-25  Score=142.78  Aligned_cols=96  Identities=19%  Similarity=0.307  Sum_probs=75.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.........   ....+++.|+|||.+.. ..++.++
T Consensus       142 qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~~  215 (362)
T 3pg1_A          142 HILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK---THYVTHRWYRAPELVMQFKGFTKLV  215 (362)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHH
T ss_pred             HHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEEecCccccccccccc---ceecccceecCcHHhcCCCCCCcHh
Confidence            7899999999   789999999999999999999999999998654332211   22357888999999876 5688999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||.+.+
T Consensus       216 DiwslG~il~~l~~g~~pf~~~~  238 (362)
T 3pg1_A          216 DMWSAGCVMAEMFNRKALFRGST  238 (362)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             HHHhHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999998765

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.92  E-value=3.3e-25  Score=141.96  Aligned_cols=96  Identities=27%  Similarity=0.526  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC------C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG------D   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~------~   75 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.........   ....|++.|+|||++.+.      .
T Consensus       208 qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~  281 (365)
T 2y7j_A          208 SLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL---RELCGTPGYLAPEILKCSMDETHPG  281 (365)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHTTCTTSCC
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCccc---ccCCCCCCccChhhccccccccCcC
Confidence            7889999999   789999999999999999999999999998765433221   223688999999988632      4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++.++|+||+|+++|++++|..||.+.+
T Consensus       282 ~~~~~Di~slG~il~ell~g~~pf~~~~  309 (365)
T 2y7j_A          282 YGKEVDLWACGVILFTLLAGSPPFWHRR  309 (365)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence            7789999999999999999999997654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.92  E-value=8.9e-26  Score=140.55  Aligned_cols=97  Identities=23%  Similarity=0.375  Sum_probs=77.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... .......++..|+|||.+....++.++
T Consensus       122 qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  198 (295)
T 3ugc_A          122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVAS  198 (295)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHH
Confidence            7899999999   799999999999999999999999999998765433221 111222466679999999989999999


Q ss_pred             hHHHHHHHHHHHHhCCCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      |+||+|++++++++|..|+..
T Consensus       199 Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          199 DVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCS
T ss_pred             HHHHHHHHHHHHHhcccccCC
Confidence            999999999999999988754

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.92  E-value=1.1e-25  Score=139.10  Aligned_cols=99  Identities=28%  Similarity=0.452  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......... .....++..|+|||.+....++.++|
T Consensus       117 qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  192 (279)
T 1qpc_A          117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFPIKWTAPEAINYGTFTIKSD  192 (279)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC-CTTCCCCTTTSCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc-ccCCCCccCccChhhhccCCCCchhh
Confidence            7889999999   7999999999999999999999999999987654332211 12224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       193 i~slG~il~el~~~g~~p~~~~~~  216 (279)
T 1qpc_A          193 VWSFGILLTEIVTHGRIPYPGMTN  216 (279)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred             hHHHHHHHHHHHhCCCCCCcccCH
Confidence            9999999999999 9999976543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.92  E-value=1.5e-25  Score=140.54  Aligned_cols=98  Identities=24%  Similarity=0.395  Sum_probs=73.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++......... ......+++.|++||.+....++.++|
T Consensus       142 qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  217 (309)
T 2h34_A          142 QIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT-QLGNTVGTLYYMAPERFSESHATYRAD  217 (309)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCH
T ss_pred             HHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc-cccccCCCcCccCHHHHcCCCCCchHh
Confidence            7889999999   789999999999999999999999999998655432211 112235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+.+
T Consensus       218 i~slG~il~~l~~g~~pf~~~~  239 (309)
T 2h34_A          218 IYALTCVLYECLTGSPPYQGDQ  239 (309)
T ss_dssp             HHHHHHHHHHHHHSSCSSCSCH
T ss_pred             HHHHHHHHHHHHHCCCCCCCch
Confidence            9999999999999999997654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.92  E-value=2.3e-25  Score=144.94  Aligned_cols=97  Identities=24%  Similarity=0.460  Sum_probs=75.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccCCCCCcceecccccccccccccceecc---CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~   75 (110)
                      |++.|+.|||   +.+++||||||.||+++.++   .++++|||+++.......   .....|++.|+|||.+..   ..
T Consensus       247 qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  320 (419)
T 3i6u_A          247 QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAG  320 (419)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CT
T ss_pred             HHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc---ccccCCCCCccCceeeecCCCCC
Confidence            7899999999   78999999999999997544   599999999876543221   122368899999998853   45


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|++++++++|..||.....
T Consensus       321 ~~~~~DiwslG~il~~lltg~~pf~~~~~  349 (419)
T 3i6u_A          321 YNRAVDCWSLGVILFICLSGYPPFSEHRT  349 (419)
T ss_dssp             THHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence            77899999999999999999999976543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.92  E-value=4e-25  Score=138.53  Aligned_cols=97  Identities=27%  Similarity=0.400  Sum_probs=83.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....+++.|++||.+....++.++|
T Consensus       133 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  207 (314)
T 3com_A          133 STLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK--RNTVIGTPFWMAPEVIQEIGYNCVAD  207 (314)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC--BCCCCSCGGGCCHHHHSSSCBCTTHH
T ss_pred             HHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc--cCccCCCCCccChhhcCCCCCCcccc
Confidence            6889999999   799999999999999999999999999998765432221  12235788999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||...+
T Consensus       208 i~slG~il~~l~~g~~p~~~~~  229 (314)
T 3com_A          208 IWSLGITAIEMAEGKPPYADIH  229 (314)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999997654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.92  E-value=1.2e-25  Score=139.33  Aligned_cols=100  Identities=25%  Similarity=0.409  Sum_probs=84.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........... ....+++.|+|||.+....++.++|
T Consensus       119 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  194 (288)
T 3kfa_A          119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSD  194 (288)
T ss_dssp             HHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE-TTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc-cCCccccCcCChhhhccCCCCchhh
Confidence            6889999999   78999999999999999999999999999876654332222 2224667899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||+|++++++++ |..||.+.+..
T Consensus       195 i~slG~il~~ll~~g~~p~~~~~~~  219 (288)
T 3kfa_A          195 VWAFGVLLWEIATYGMSPYPGIDLS  219 (288)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999 99999876543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.92  E-value=3.5e-25  Score=136.77  Aligned_cols=96  Identities=29%  Similarity=0.511  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE---CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||||.||++   +.++.++++|||++.........   ....+++.|+|||.+.+. ++.
T Consensus       114 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~-~~~  186 (277)
T 3f3z_A          114 DVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKVGTPYYVSPQVLEGL-YGP  186 (277)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB---CCCCSCTTTCCHHHHTTC-BCT
T ss_pred             HHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch---hccCCCCCccChHHhccc-CCc
Confidence            6889999999   7999999999999999   77889999999998765433221   223588899999987654 789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       187 ~~Di~slG~~l~~l~~g~~p~~~~~~  212 (277)
T 3f3z_A          187 ECDEWSAGVMMYVLLCGYPPFSAPTD  212 (277)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhehhHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999999987654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.92  E-value=3.1e-25  Score=146.40  Aligned_cols=96  Identities=30%  Similarity=0.570  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC---CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++   .++.++++|||++........   .....|++.|+|||++.+ .++.
T Consensus       129 qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~  201 (486)
T 3mwu_A          129 QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGTAYYIAPEVLRG-TYDE  201 (486)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCH
T ss_pred             HHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCc---cCCCcCCCCCCCHHHhCC-CCCc
Confidence            7889999999   78999999999999995   456799999999876543321   122368899999998865 5899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||.+.+.
T Consensus       202 ~~DiwslG~il~~ll~g~~pf~~~~~  227 (486)
T 3mwu_A          202 KCDVWSAGVILYILLSGTPPFYGKNE  227 (486)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=2e-25  Score=137.98  Aligned_cols=95  Identities=26%  Similarity=0.454  Sum_probs=77.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........     ...+++.|+|||.+....++.++|
T Consensus       125 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  196 (278)
T 1byg_A          125 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  196 (278)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccccc-----CCCccccccCHHHhCCCCCCchhc
Confidence            6889999999   78999999999999999999999999998865433221     124667899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||...+.
T Consensus       197 i~slG~il~~l~t~g~~p~~~~~~  220 (278)
T 1byg_A          197 VWSFGILLWEIYSFGRVPYPRIPL  220 (278)
T ss_dssp             HHHHHHHHHHHHTTSCCSCTTSCG
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999998 9999976544

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.2e-25  Score=139.63  Aligned_cols=100  Identities=22%  Similarity=0.422  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......... ......+++.|+|||.+....++.++
T Consensus       118 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  194 (287)
T 1u59_A          118 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS  194 (287)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchh
Confidence            7889999999   7899999999999999999999999999987664332221 12223457789999999888889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|++++++++ |..||.+.+.
T Consensus       195 Di~slG~il~ellt~g~~p~~~~~~  219 (287)
T 1u59_A          195 DVWSYGVTMWEALSYGQKPYKKMKG  219 (287)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCT
T ss_pred             hHHHHHHHHHHHHcCCCCCcccCCH
Confidence            99999999999998 9999976554

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.92  E-value=4.5e-26  Score=152.01  Aligned_cols=99  Identities=32%  Similarity=0.429  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||+++........ ......++..|+|||.+....++.++|
T Consensus       371 qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sD  446 (535)
T 2h8h_A          371 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSD  446 (535)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH-TTCSTTSCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee-cccCCcCcccccCHHHhccCCCCchhh
Confidence            7899999999   799999999999999999999999999998765432111 111123567899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||||+++||+++ |..||.+.+.
T Consensus       447 vwSlGv~l~el~t~g~~P~~~~~~  470 (535)
T 2h8h_A          447 VWSFGILLTELTTKGRVPYPGMVN  470 (535)
T ss_dssp             HHHHHHHHHHHTTTTCCSSTTCCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999 9999987653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.92  E-value=2.7e-25  Score=139.91  Aligned_cols=97  Identities=24%  Similarity=0.384  Sum_probs=75.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....+++.|+|||.+.     ...+
T Consensus       137 qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  211 (326)
T 2x7f_A          137 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATY  211 (326)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------C
T ss_pred             HHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccc--cccccCCccccChhhhccccccCcCC
Confidence            7899999999   789999999999999999999999999998655332111  12235788999999986     4567


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|+++|++++|..||.+.+
T Consensus       212 ~~~~Di~slG~il~~l~~g~~p~~~~~  238 (326)
T 2x7f_A          212 DFKSDLWSLGITAIEMAEGAPPLCDMH  238 (326)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCc
Confidence            889999999999999999999997654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.92  E-value=2.3e-25  Score=137.14  Aligned_cols=96  Identities=30%  Similarity=0.511  Sum_probs=75.9

Q ss_pred             cHHHHHHHHhcCCCCC---eEEcCCCCCceEECC--------CCceEEecccccccCCCCCcceecccccccccccccce
Q 043407            2 EIANALAYLHVGFPRP---IVFKNIKLSSILFDE--------DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEY   70 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~---~~h~dl~~~nil~~~--------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~   70 (110)
                      |++.|+.|||   +.+   ++|+||||+||+++.        ++.++++|||++.........    ...+++.|+|||.
T Consensus       113 ~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~y~aPE~  185 (271)
T 3dtc_A          113 QIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPEV  185 (271)
T ss_dssp             HHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHH
T ss_pred             HHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccccc----CCCCccceeCHHH
Confidence            7889999999   566   999999999999985        678999999998755432221    2257889999999


Q ss_pred             eccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           71 VTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        71 ~~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.+..++.++|+||+|++++++++|+.||.+.+.
T Consensus       186 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~  219 (271)
T 3dtc_A          186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG  219 (271)
T ss_dssp             HHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9988899999999999999999999999987543

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.92  E-value=1.1e-25  Score=148.30  Aligned_cols=96  Identities=28%  Similarity=0.568  Sum_probs=81.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE---CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||++   +.++.++++|||++.........   ....|++.|+|||.+.+ .++.
T Consensus       134 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~-~~~~  206 (484)
T 3nyv_A          134 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGTAYYIAPEVLHG-TYDE  206 (484)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSH---HHHTTGGGTCCHHHHHT-CCCT
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccccc---ccCCCCccccCceeecC-CCCC
Confidence            7899999999   7899999999999999   45688999999998765443221   22358899999998865 6889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||.+.+.
T Consensus       207 ~~DiwslG~il~~ll~g~~pf~~~~~  232 (484)
T 3nyv_A          207 KCDVWSTGVILYILLSGCPPFNGANE  232 (484)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cceeHHHHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999999987654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.92  E-value=4.2e-25  Score=136.65  Aligned_cols=97  Identities=28%  Similarity=0.463  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC----ceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++    .++++|||++.........   ....+++.|++||.+....++
T Consensus       116 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~  189 (283)
T 3bhy_A          116 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLG  189 (283)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc---cccCCCcCccCcceecCCCCC
Confidence            7889999999   78999999999999998776    7999999998765433221   122578899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|++++++++|..||.+.+.
T Consensus       190 ~~~Di~slG~il~~l~~g~~p~~~~~~  216 (283)
T 3bhy_A          190 LEADMWSIGVITYILLSGASPFLGETK  216 (283)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             cchhhhhHHHHHHHHHHCCCCCCCcch
Confidence            999999999999999999999977654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.92  E-value=1.5e-24  Score=134.79  Aligned_cols=94  Identities=29%  Similarity=0.460  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+  ++|+||||.||+++ .++.++++|||++.........    ...+++.|+|||.+. ..++.
T Consensus       137 qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~t~~y~aPE~~~-~~~~~  208 (290)
T 1t4h_A          137 QILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPEFMAPEMYE-EKYDE  208 (290)
T ss_dssp             HHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE----ESCSSCCCCCGGGGG-TCCCT
T ss_pred             HHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc----cccCCcCcCCHHHHh-ccCCC
Confidence            7889999999   777  99999999999997 7889999999998654332221    225788999999876 45889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||....
T Consensus       209 ~~Di~slG~~l~~l~~g~~pf~~~~  233 (290)
T 1t4h_A          209 SVDVYAFGMCMLEMATSEYPYSECQ  233 (290)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCS
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCcC
Confidence            9999999999999999999997643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.92  E-value=3.8e-25  Score=146.29  Aligned_cols=97  Identities=28%  Similarity=0.573  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++..   +.++++|||++........   .....|++.|+|||++. ..++.
T Consensus       144 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~  216 (494)
T 3lij_A          144 QVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK---MKERLGTAYYIAPEVLR-KKYDE  216 (494)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC---BCCCCSCTTTCCHHHHT-TCBCT
T ss_pred             HHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc---ccccCCCcCeeCHHHHc-ccCCC
Confidence            7889999999   7899999999999999764   4599999999876543322   12236889999999875 56889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++|+||+|+++|++++|..||.+.+..
T Consensus       217 ~~DiwslG~il~~ll~g~~pf~~~~~~  243 (494)
T 3lij_A          217 KCDVWSIGVILFILLAGYPPFGGQTDQ  243 (494)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999999876543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.92  E-value=2.4e-25  Score=140.27  Aligned_cols=94  Identities=23%  Similarity=0.355  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~   79 (110)
                      |++.||.|||   +.+++||||||.||+++ .++.++++|||++........    ....+++.|+|||.+....+ +.+
T Consensus       157 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~  229 (320)
T 3a99_A          157 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRS  229 (320)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccc----cCCCCCccCCChHHhccCCCCCcc
Confidence            7899999999   79999999999999998 678999999999876543221    12257889999999877665 678


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +|+||+|++++++++|..||...
T Consensus       230 ~Di~slG~il~el~~g~~pf~~~  252 (320)
T 3a99_A          230 AAVWSLGILLYDMVCGDIPFEHD  252 (320)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             chHHhHHHHHHHHHHCCCCCCCh
Confidence            89999999999999999999653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.4e-25  Score=140.97  Aligned_cols=100  Identities=23%  Similarity=0.376  Sum_probs=77.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... .......+++.|+|||.+....++.++
T Consensus       155 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (333)
T 1mqb_A          155 GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS  231 (333)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchh
Confidence            7889999999   789999999999999999999999999998765432211 111122356689999999888899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|++++++++ |..||.+.+.
T Consensus       232 Di~slG~il~ellt~g~~pf~~~~~  256 (333)
T 1mqb_A          232 DVWSFGIVMWEVMTYGERPYWELSN  256 (333)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             hhHHHHHHHHHHHcCCCCCcccCCH
Confidence            99999999999998 9999976543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.91  E-value=3e-25  Score=139.22  Aligned_cols=97  Identities=23%  Similarity=0.429  Sum_probs=74.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc--------
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--------   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~--------   73 (110)
                      |++.|+.|||   +.+++|+||||.||+++ ++.++++|||++................+++.|+|||.+..        
T Consensus       135 qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  210 (313)
T 3cek_A          135 NMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG  210 (313)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC------
T ss_pred             HHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccc
Confidence            7899999999   78999999999999996 48899999999876544332222233358889999999865        


Q ss_pred             ---CCCCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           74 ---GDYNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        74 ---~~~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                         ..++.++|+||+|++++++++|..||...
T Consensus       211 ~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (313)
T 3cek_A          211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  242 (313)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             cccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence               35788999999999999999999999754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.91  E-value=6.1e-25  Score=143.48  Aligned_cols=98  Identities=23%  Similarity=0.394  Sum_probs=74.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-----CCceEEecccccccCCCCCcc-eecccccccccccccceec---
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVT---   72 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-----~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~---   72 (110)
                      |++.|+.|||   +.+++||||||.||+++.     ...++++|||+++........ .......|++.|+|||++.   
T Consensus       126 qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  202 (432)
T 3p23_A          126 QTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC  202 (432)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC-
T ss_pred             HHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhccc
Confidence            7899999999   789999999999999953     235789999998766432211 1222336899999999987   


Q ss_pred             cCCCCchhhHHHHHHHHHHHHh-CCCCcccC
Q 043407           73 TGDYNEKCDVFSFGVLLLVLLT-GQKLYSID  102 (110)
Q Consensus        73 ~~~~~~~~d~~s~g~~~~~~~~-g~~p~~~~  102 (110)
                      ...++.++|+||+|++++++++ |..||...
T Consensus       203 ~~~~t~~~DiwSlG~il~ellt~g~~pf~~~  233 (432)
T 3p23_A          203 KENPTYTVDIFSAGCVFYYVISEGSHPFGKS  233 (432)
T ss_dssp             --CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred             ccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence            3556789999999999999999 89999654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.91  E-value=2.1e-25  Score=138.31  Aligned_cols=94  Identities=24%  Similarity=0.442  Sum_probs=71.4

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccccccccccccee----ccCCC
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV----TTGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----~~~~~   76 (110)
                      |++.|+.|||   +. +++|+||||+||+++.++.++++|||++.........   ....+++.|+|||.+    ....+
T Consensus       117 qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~  190 (290)
T 3fme_A          117 SIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAK---DIDAGCKPYMAPERINPELNQKGY  190 (290)
T ss_dssp             HHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--C
T ss_pred             HHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccc---cccCCCccccChhhcChhhcCcCC
Confidence            7889999999   66 9999999999999999999999999998765432211   122578899999996    45567


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCccc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +.++|+||+|++++++++|..||..
T Consensus       191 ~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          191 SVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCccc
Confidence            8999999999999999999999975

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.91  E-value=4.6e-25  Score=137.92  Aligned_cols=95  Identities=27%  Similarity=0.519  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE---CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|+||++   +.++.++++|||++.......    .....+++.|+|||.+....++.
T Consensus       114 qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~  186 (304)
T 2jam_A          114 QVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPYSK  186 (304)
T ss_dssp             HHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT----THHHHSCCCBCCTTTBSSCSCCH
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc----cccccCCCCccChHHhccCCCCc
Confidence            6889999999   7899999999999999   678899999999986543221    12225788999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++|+||+|++++++++|..||.+.+
T Consensus       187 ~~Di~slG~il~~l~~g~~pf~~~~  211 (304)
T 2jam_A          187 AVDCWSIGVITYILLCGYPPFYEET  211 (304)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            9999999999999999999997654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=1.3e-25  Score=139.66  Aligned_cols=100  Identities=26%  Similarity=0.421  Sum_probs=82.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........... .....+++.|+|||.+....++.++
T Consensus       125 qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  201 (291)
T 1xbb_A          125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS  201 (291)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhh
Confidence            7899999999   78999999999999999999999999999876644332221 1222356789999999888888999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|++++++++ |..||.+.+.
T Consensus       202 Di~slG~il~~l~~~g~~p~~~~~~  226 (291)
T 1xbb_A          202 DVWSFGVLMWEAFSYGQKPYRGMKG  226 (291)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCCCH
Confidence            99999999999999 9999987543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.91  E-value=1.1e-25  Score=142.04  Aligned_cols=100  Identities=26%  Similarity=0.385  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||||.||+++.   +..++++|||++................+++.|+|||.+....++.
T Consensus       148 qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  224 (327)
T 2yfx_A          148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS  224 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCc
Confidence            7889999999   789999999999999984   4569999999986543322222223335778899999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++ |..||.+.+.
T Consensus       225 ~~Di~slG~il~ellt~g~~p~~~~~~  251 (327)
T 2yfx_A          225 KTDTWSFGVLLWEIFSLGYMPYPSKSN  251 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCCCcCH
Confidence            9999999999999998 9999976543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.91  E-value=1.9e-25  Score=140.86  Aligned_cols=97  Identities=26%  Similarity=0.417  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......   ......+++.|++||.+....++.++|
T Consensus       150 qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~D  223 (327)
T 1fvr_A          150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSD  223 (327)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCccceEEEcCCCeEEEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhc
Confidence            6889999999   7999999999999999999999999999986432211   112224567899999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       224 i~slG~il~ellt~g~~pf~~~~~  247 (327)
T 1fvr_A          224 VWSYGVLLWEIVSLGGTPYCGMTC  247 (327)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             chHHHHHHHHHHcCCCCCCCCCcH
Confidence            9999999999998 9999977653

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.91  E-value=1e-25  Score=145.54  Aligned_cols=96  Identities=26%  Similarity=0.377  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE----CCCCceEEecccccccCCCCCcceecccccccccccccceecc----
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT----   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~----   73 (110)
                      |++.|+.|||   +.+++||||||+||++    +.++.++++|||+++........   ....+++.|+|||.+..    
T Consensus       120 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  193 (396)
T 4eut_A          120 DVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLR  193 (396)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGS---SCSSSCCTTCCHHHHHHHCC-
T ss_pred             HHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcc---ccccCCccccCHHHhhccccc
Confidence            7899999999   7899999999999998    67778999999998765443221   22358889999998864    


Q ss_pred             ----CCCCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           74 ----GDYNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        74 ----~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                          ..++.++|+||+|+++|++++|..||.+.+
T Consensus       194 ~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~  227 (396)
T 4eut_A          194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE  227 (396)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTT
T ss_pred             cccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence                446788999999999999999999997543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.91  E-value=1.8e-25  Score=152.03  Aligned_cols=99  Identities=25%  Similarity=0.396  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++......... ......+++.|+|||.+....++.++|
T Consensus       499 qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~D  574 (656)
T 2j0j_A          499 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASD  574 (656)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcce-eccCCCCCcceeCHHHhcCCCCCchhh
Confidence            7899999999   789999999999999999999999999998765433221 112224567899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|+++||+++ |..||.+.+.
T Consensus       575 iwSlG~il~ellt~g~~Pf~~~~~  598 (656)
T 2j0j_A          575 VWMFGVCMWEILMHGVKPFQGVKN  598 (656)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCH
Confidence            9999999999997 9999987654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.91  E-value=9.1e-26  Score=143.92  Aligned_cols=96  Identities=23%  Similarity=0.424  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +. +++|+||||.||+++.++.++++|||++.......    .....+++.|+|||.+.+..++.++
T Consensus       139 ~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~  211 (360)
T 3eqc_A          139 AVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGTRSYMSPERLQGTHYSVQS  211 (360)
T ss_dssp             HHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHH
T ss_pred             HHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc----ccCCCCCCCeECHHHHcCCCCCchh
Confidence            6889999999   64 89999999999999999999999999886432111    1122578899999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++++++|..||...+.
T Consensus       212 Di~slG~il~~l~~g~~pf~~~~~  235 (360)
T 3eqc_A          212 DIWSMGLSLVEMAVGRYPIPPPDA  235 (360)
T ss_dssp             HHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999976553

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.91  E-value=1.3e-25  Score=137.94  Aligned_cols=99  Identities=22%  Similarity=0.413  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++......... ......++..|+|||.+....++.++|
T Consensus       112 ~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (267)
T 3t9t_A          112 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFPVKWASPEVFSFSRYSSKSD  187 (267)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-STTSTTCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccccc-ccccccccccccChhhhcCCCccchhc
Confidence            7889999999   789999999999999999999999999998765432111 111224567899999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      +||+|++++++++ |..||.+.+.
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~  211 (267)
T 3t9t_A          188 VWSFGVLMWEVFSEGKIPYENRSN  211 (267)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             hhhhHHHHHHHhccCCCCCCCCCH
Confidence            9999999999999 8999976543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.91  E-value=2.6e-25  Score=141.05  Aligned_cols=96  Identities=27%  Similarity=0.540  Sum_probs=63.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.+   +.++++|||++........    ....+++.|++||.+....++.
T Consensus       136 ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~  208 (336)
T 3fhr_A          136 DIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL----QTPCYTPYYVAPEVLGPEKYDK  208 (336)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------CHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceecccccc----ccCCCCcCccChhhhCCCCCCc
Confidence            7899999999   7899999999999999764   5599999999876543221    1235788999999998888889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       209 ~~Di~slG~il~~l~~g~~pf~~~~~  234 (336)
T 3fhr_A          209 SCDMWSLGVIMYILLCGFPPFYSNTG  234 (336)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCccc
Confidence            99999999999999999999976544

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.91  E-value=4.5e-25  Score=138.21  Aligned_cols=97  Identities=25%  Similarity=0.393  Sum_probs=72.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........  .....+++.|++||.+....++.++|
T Consensus       144 qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (310)
T 2wqm_A          144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--AHSLVGTPYYMSPERIHENGYNFKSD  218 (310)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCcc--ccccCCCeeEeChHHhCCCCCCchhh
Confidence            7889999999   789999999999999999999999999998655432211  11225788899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCC
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +||+|++++++++|..||.+..
T Consensus       219 v~slG~il~~l~~g~~p~~~~~  240 (310)
T 2wqm_A          219 IWSLGCLLYEMAALQSPFYGDK  240 (310)
T ss_dssp             HHHHHHHHHHHHHSSCTTC---
T ss_pred             HHHHHHHHHHHHhCCCCCcccc
Confidence            9999999999999999997543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.91  E-value=8.1e-25  Score=144.99  Aligned_cols=97  Identities=31%  Similarity=0.553  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC---ceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||.||+++.++   .++++|||++.........   ....|++.|+|||.+. ..++.
T Consensus       154 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~-~~~~~  226 (504)
T 3q5i_A          154 QILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL---RDRLGTAYYIAPEVLK-KKYNE  226 (504)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCB---CCCCSCTTTCCHHHHT-TCBCT
T ss_pred             HHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCcc---ccccCCcCCCCHHHhc-cCCCc
Confidence            7889999999   78999999999999998765   6899999999766543221   2236889999999876 46889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++|+||+|+++|++++|..||.+.+..
T Consensus       227 ~~DiwslG~il~~ll~g~~pf~~~~~~  253 (504)
T 3q5i_A          227 KCDVWSCGVIMYILLCGYPPFGGQNDQ  253 (504)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999999876543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.91  E-value=6.8e-25  Score=137.45  Aligned_cols=100  Identities=19%  Similarity=0.375  Sum_probs=79.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-CCCceEEecccccccCCCCCc-ceecccccccccccccceecc-CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGET-HIKDAIPIGIMGFVATEYVTT-GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~-~~~~~   78 (110)
                      |++.|++|||   +.+++|+||||+||+++ .++.++++|||++........ ........++..|++||.+.. ..++.
T Consensus       128 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  204 (320)
T 2i6l_A          128 QLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK  204 (320)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCc
Confidence            7899999999   78999999999999997 567899999999876532211 111122346788999998865 56889


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       205 ~~Di~slG~il~el~~g~~pf~~~~~  230 (320)
T 2i6l_A          205 AIDMWAAGCIFAEMLTGKTLFAGAHE  230 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhhHhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=4.5e-25  Score=138.87  Aligned_cols=98  Identities=28%  Similarity=0.423  Sum_probs=82.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......... ......++..|++||.+....++.++
T Consensus       142 ~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  218 (318)
T 3lxp_A          142 QICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS  218 (318)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHH
Confidence            7889999999   7899999999999999999999999999998765433221 12233567789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|..||...
T Consensus       219 Di~slG~il~~ll~g~~p~~~~  240 (318)
T 3lxp_A          219 DVWSFGVTLYELLTHCDSSQSP  240 (318)
T ss_dssp             HHHHHHHHHHHHHTTTCGGGSH
T ss_pred             HHHHHHHHHHHHHhCCCccccc
Confidence            9999999999999999998643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.91  E-value=8e-25  Score=135.89  Aligned_cols=96  Identities=34%  Similarity=0.539  Sum_probs=76.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEE---CCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||||.||++   +.++.++++|||++........   .....+++.|+|||.+. ..++.
T Consensus       132 qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~  204 (285)
T 3is5_A          132 QMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFK-RDVTF  204 (285)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCH
T ss_pred             HHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc---CcCcccccCcCChHHhc-cCCCc
Confidence            6889999999   7899999999999999   4457899999999875543221   12235788999999875 56789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       205 ~~Di~slG~il~~ll~g~~pf~~~~~  230 (285)
T 3is5_A          205 KCDIWSAGVVMYFLLTGCLPFTGTSL  230 (285)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccCeehHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.91  E-value=1.9e-25  Score=138.65  Aligned_cols=100  Identities=21%  Similarity=0.426  Sum_probs=81.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.......... ......++..|+|||.+....++.++
T Consensus       129 ~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  205 (291)
T 1u46_A          129 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS  205 (291)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchh
Confidence            7889999999   7899999999999999999999999999987665433221 12223466689999999888888999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~  104 (110)
                      |+||+|++++++++ |..||.+.+.
T Consensus       206 Di~slG~il~~l~~~g~~p~~~~~~  230 (291)
T 1u46_A          206 DTWMFGVTLWEMFTYGQEPWIGLNG  230 (291)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             hHHHHHHHHHHHHhCCCCCcccCCH
Confidence            99999999999999 9999976543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.91  E-value=3.2e-25  Score=139.88  Aligned_cols=98  Identities=24%  Similarity=0.354  Sum_probs=82.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++.......... ......++..|++||.+.+..++.++
T Consensus       135 qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  211 (327)
T 3lxl_A          135 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS  211 (327)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHH
Confidence            7899999999   7999999999999999999999999999998765433222 22233477789999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      |+||+|++++++++|..||...
T Consensus       212 Di~slG~il~~ll~g~~p~~~~  233 (327)
T 3lxl_A          212 DVWSFGVVLYELFTYCDKSCSP  233 (327)
T ss_dssp             HHHHHHHHHHHHHTTTCGGGSH
T ss_pred             hHHHHHHHHHHHHhCCCCCccc
Confidence            9999999999999999998543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.91  E-value=7e-25  Score=135.55  Aligned_cols=93  Identities=22%  Similarity=0.469  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++.........   ....+++.|+|||.+....++.++|
T Consensus       130 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  203 (284)
T 2a19_B          130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKGTLRYMSPEQISSQDYGKEVD  203 (284)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCC---CCCCSCCTTSCHHHHHCSCCCTHHH
T ss_pred             HHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccc---cccCCcccccChhhhccCCCcchhh
Confidence            7889999999   789999999999999999999999999998765443221   1225788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~  100 (110)
                      +||+|++++++++|..|+.
T Consensus       204 i~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          204 LYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             HHHHHHHHHHHHSCCSSHH
T ss_pred             hHHHHHHHHHHHhcCCcch
Confidence            9999999999999998874

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.91  E-value=1.2e-25  Score=138.94  Aligned_cols=98  Identities=24%  Similarity=0.381  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCC-----eEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC
Q 043407            2 EIANALAYLHVGFPRP-----IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~-----~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~   76 (110)
                      |++.|+.|||   +.+     ++|+||+|.||+++.++.++++|||++..........  ....+++.|+|||.+....+
T Consensus       119 ~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~  193 (279)
T 2w5a_A          119 QLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KTFVGTPYYMSPEQMNRMSY  193 (279)
T ss_dssp             HHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHH--HHHHSCCTTCCHHHHHCC-C
T ss_pred             HHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccc--cccCCCccccChHHhccCCC
Confidence            7889999999   677     9999999999999999999999999987654332211  12357888999999988889


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +.++|+||+|++++++++|..||...+.
T Consensus       194 ~~~~Di~slG~il~~l~~g~~p~~~~~~  221 (279)
T 2w5a_A          194 NEKSDIWSLGCLLYELCALMPPFTAFSQ  221 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCcccCH
Confidence            9999999999999999999999976643

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.91  E-value=3.8e-25  Score=137.96  Aligned_cols=96  Identities=26%  Similarity=0.351  Sum_probs=81.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++|+||||.||+++.++.++++|||++......... .......++..|+|||.+....++.++
T Consensus       134 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  210 (302)
T 4e5w_A          134 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIAS  210 (302)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcch
Confidence            7889999999   799999999999999999999999999998766543322 122233577789999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~  100 (110)
                      |+||+|++++++++|..|+.
T Consensus       211 Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          211 DVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             HHHHHHHHHHHHHTTTCGGG
T ss_pred             hHHHHHHHHHHHHHccCCCc
Confidence            99999999999999988764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=5.1e-25  Score=138.86  Aligned_cols=96  Identities=29%  Similarity=0.438  Sum_probs=64.6

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceeccccccccccccccee----ccCCC
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV----TTGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----~~~~~   76 (110)
                      |++.|+.|||   +. +++|+||||.||+++.++.++++|||++.........   ....+++.|+|||.+    ....+
T Consensus       133 ~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~  206 (327)
T 3aln_A          133 ATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK---TRDAGCRPYMAPERIDPSASRQGY  206 (327)
T ss_dssp             HHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------------------------------C
T ss_pred             HHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc---ccCCCCccccCceeeccccCcCCC
Confidence            6889999999   67 9999999999999999999999999998765432211   122578899999998    45568


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|++++++++|..||.+.+
T Consensus       207 ~~~~Di~slG~il~~l~~g~~pf~~~~  233 (327)
T 3aln_A          207 DVRSDVWSLGITLYELATGRFPYPKWN  233 (327)
T ss_dssp             CSHHHHHHHHHHHHHHHHSCCCSSCC-
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            899999999999999999999997643

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.91  E-value=1.8e-24  Score=137.21  Aligned_cols=96  Identities=29%  Similarity=0.514  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCc-
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNE-   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~-   78 (110)
                      |++.|+.|||   + .+++|+||+|.||+++.++.++++|||.+......    ......+++.|+|||.+... .++. 
T Consensus       159 qi~~~l~~lH---~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (348)
T 2pml_X          159 SVLNSFSYIH---NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGA  231 (348)
T ss_dssp             HHHHHHHHHH---HTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHH
T ss_pred             HHHHHHHHHh---ccCCEeecCCChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcc
Confidence            7899999999   7 89999999999999999999999999998765432    11223588899999999877 5555 


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       232 ~~Di~slG~il~~l~~g~~pf~~~~~  257 (348)
T 2pml_X          232 KVDIWSLGICLYVMFYNVVPFSLKIS  257 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            89999999999999999999986654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.91  E-value=7.4e-25  Score=136.16  Aligned_cols=96  Identities=25%  Similarity=0.463  Sum_probs=79.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCC--CCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|.||+++. ++.++++|||++.........  .....+++.|+|||.+....  ++.
T Consensus       130 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~  204 (295)
T 2clq_A          130 QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC--TETFTGTLQYMAPEIIDKGPRGYGK  204 (295)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSH
T ss_pred             HHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc--ccccCCCccccChhhhcCCCCCCCc
Confidence            7899999999   789999999999999987 889999999998765432211  12235788999999987643  788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++|+||+|++++++++|..||...
T Consensus       205 ~~Di~slG~il~~l~~g~~pf~~~  228 (295)
T 2clq_A          205 AADIWSLGCTIIEMATGKPPFYEL  228 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred             HHHHHHHHHHHHHHHHCCCCccCC
Confidence            999999999999999999999654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.91  E-value=3.6e-25  Score=137.90  Aligned_cols=100  Identities=26%  Similarity=0.455  Sum_probs=79.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc---ceecccccccccccccceecc-CCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET---HIKDAIPIGIMGFVATEYVTT-GDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~~~~pe~~~~-~~~~   77 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........   ........+++.|+|||.+.. ..++
T Consensus       129 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  205 (303)
T 2vwi_A          129 EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD  205 (303)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCC
T ss_pred             HHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCC
Confidence            7889999999   78999999999999999999999999998865543211   111123357889999998865 4578


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .++|+||+|++++++++|..||...+.
T Consensus       206 ~~~Di~slG~il~~l~~g~~pf~~~~~  232 (303)
T 2vwi_A          206 FKADIWSFGITAIELATGAAPYHKYPP  232 (303)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTSCG
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccCch
Confidence            999999999999999999999976543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.91  E-value=1.1e-24  Score=137.16  Aligned_cols=97  Identities=25%  Similarity=0.451  Sum_probs=79.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc---eEEecccccccCCCCCcceecccccccccccccceec---cCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~---~~~   75 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.   ++++|||++........   .....+++.|+|||.+.   ...
T Consensus       122 qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~  195 (322)
T 2ycf_A          122 QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTLCGTPTYLAPEVLVSVGTAG  195 (322)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHH---HHHHHSCCTTCCHHHHHHTTTTT
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccc---cccccCCcCccCchhhccCCCCC
Confidence            7899999999   789999999999999987654   99999999876543221   11235788999999874   456


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|++++++++|..||.....
T Consensus       196 ~~~~~Di~slG~il~~l~~g~~pf~~~~~  224 (322)
T 2ycf_A          196 YNRAVDCWSLGVILFICLSGYPPFSEHRT  224 (322)
T ss_dssp             CTTHHHHHHHHHHHHHHHHSSCSSCSTTC
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccch
Confidence            78999999999999999999999976544

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.90  E-value=4.4e-24  Score=132.90  Aligned_cols=96  Identities=27%  Similarity=0.461  Sum_probs=80.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec------cCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT------TGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~------~~~   75 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........   ....+++.|++||.+.      ...
T Consensus       132 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  205 (298)
T 1phk_A          132 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPG  205 (298)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHHCTTSCC
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCccc---ccccCCccccCHHHhcccccccccc
Confidence            7889999999   799999999999999999999999999998765432221   2235788999999885      345


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      ++.++|+||+|++++++++|..||.+.+
T Consensus       206 ~~~~~Di~slG~~l~~l~~g~~p~~~~~  233 (298)
T 1phk_A          206 YGKEVDMWSTGVIMYTLLAGSPPFWHRK  233 (298)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence            7889999999999999999999997654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.90  E-value=3e-24  Score=134.77  Aligned_cols=99  Identities=23%  Similarity=0.365  Sum_probs=76.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC---cceecccccccccccccceecc-----
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIPIGIMGFVATEYVTT-----   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~~~~pe~~~~-----   73 (110)
                      |++.|+.|||   +.+++|+||||.||+++ ++.++++|||++.......   .........+++.|+|||.+..     
T Consensus       138 qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  213 (319)
T 2y4i_B          138 EIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT  213 (319)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC-
T ss_pred             HHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccc
Confidence            7899999999   78999999999999998 6789999999876542211   1111223357889999998864     


Q ss_pred             ----CCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           74 ----GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        74 ----~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                          ..++.++|+||+|++++++++|..||.+.+.
T Consensus       214 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  248 (319)
T 2y4i_B          214 EEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA  248 (319)
T ss_dssp             -CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH
T ss_pred             cccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                3468899999999999999999999976543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.90  E-value=2e-24  Score=133.18  Aligned_cols=96  Identities=29%  Similarity=0.504  Sum_probs=74.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++.........   ....+++.|++||.+.+..+ +.++
T Consensus       119 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~  192 (276)
T 2h6d_A          119 QILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL---RTSCGSPNYAAPEVISGRLYAGPEV  192 (276)
T ss_dssp             HHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcce---ecccCCccccCHHHHcCCCCCCccc
Confidence            6889999999   789999999999999999999999999998765432211   12357888999999887665 5889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCC
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      |+||+|++++++++|..||...+
T Consensus       193 Di~slG~~l~~l~~g~~p~~~~~  215 (276)
T 2h6d_A          193 DIWSCGVILYALLCGTLPFDDEH  215 (276)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCc
Confidence            99999999999999999997654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.90  E-value=2.1e-24  Score=132.58  Aligned_cols=93  Identities=24%  Similarity=0.291  Sum_probs=77.4

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCC--
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN--   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~--   77 (110)
                      |++.|+.|||   +.+  ++|+||||+||+++.++.+++.||++.......       ...+++.|+|||.+.+...+  
T Consensus       119 qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~  188 (271)
T 3kmu_A          119 DMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTN  188 (271)
T ss_dssp             HHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSC
T ss_pred             HHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeeccc-------CccCCccccChhhhccCCCCCC
Confidence            7899999999   778  999999999999999999999998876442221       12578899999998765543  


Q ss_pred             -chhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           78 -EKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        78 -~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                       .++|+||+|+++|++++|+.||.+.+.
T Consensus       189 ~~~~Di~slG~il~el~~g~~p~~~~~~  216 (271)
T 3kmu_A          189 RRSADMWSFAVLLWELVTREVPFADLSN  216 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCTTTTSCH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccCh
Confidence             379999999999999999999976543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.4e-24  Score=137.03  Aligned_cols=97  Identities=24%  Similarity=0.389  Sum_probs=81.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.+||   +.+++|+||||.||+++.++.++++|||++........... .....++..|+|||.+....++.++
T Consensus       153 qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  229 (326)
T 2w1i_A          153 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVAS  229 (326)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchh
Confidence            7889999999   78999999999999999999999999999887654332221 1222466679999999888888999


Q ss_pred             hHHHHHHHHHHHHhCCCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      |+||+|++++++++|..||..
T Consensus       230 Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          230 DVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             HHHHHHHHHHHHHHTTCGGGS
T ss_pred             hHHHHHHHHHHHHhcCCCCCC
Confidence            999999999999999988753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.90  E-value=2.6e-24  Score=136.15  Aligned_cols=102  Identities=20%  Similarity=0.282  Sum_probs=79.7

Q ss_pred             cHHHHHHHHhcCC-----CCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~-----~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.|+.|||...     +.+++|+||||+||+++.++.++++|||++..........  ......+++.|+|||.+...
T Consensus       147 ~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  226 (342)
T 1b6c_B          147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  226 (342)
T ss_dssp             HHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSC
T ss_pred             HHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccc
Confidence            7889999999311     3689999999999999999999999999987654332211  12233688899999998765


Q ss_pred             C------CCchhhHHHHHHHHHHHHhC----------CCCcccCC
Q 043407           75 D------YNEKCDVFSFGVLLLVLLTG----------QKLYSIDE  103 (110)
Q Consensus        75 ~------~~~~~d~~s~g~~~~~~~~g----------~~p~~~~~  103 (110)
                      .      ++.++|+||+|+++|++++|          ..||....
T Consensus       227 ~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~  271 (342)
T 1b6c_B          227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV  271 (342)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             ccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccC
Confidence            3      23679999999999999999          77886553

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.90  E-value=2.4e-24  Score=135.06  Aligned_cols=95  Identities=33%  Similarity=0.535  Sum_probs=72.5

Q ss_pred             cHHHHHHHHhcCCCC-CeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCC
Q 043407            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~   75 (110)
                      |++.|+.|||   +. +++|+||+|.||+++.++.++++|||++.........   ....+++.|++||.+.     ...
T Consensus       132 ~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  205 (318)
T 2dyl_A          132 AIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK---DRSAGCAAYMAPERIDPPDPTKPD  205 (318)
T ss_dssp             HHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------
T ss_pred             HHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc---cccCCCccccChhhcccccccccC
Confidence            6889999999   64 9999999999999999999999999998655432211   1235788999999984     445


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccC
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++.++|+||+|++++++++|..||...
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~pf~~~  232 (318)
T 2dyl_A          206 YDIRADVWSLGISLVELATGQFPYKNC  232 (318)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             CccccchhhHHHHHHHHHhCCCCCCCC
Confidence            788999999999999999999999763

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.90  E-value=7.5e-25  Score=135.88  Aligned_cols=92  Identities=23%  Similarity=0.313  Sum_probs=75.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc--------eEEecccccccCCCCCcceecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~--------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.        ++++|||++......      ....+++.|+|||.+..
T Consensus       121 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          121 QLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK------DILQERIPWVPPECIEN  191 (289)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH------HHHHHTTTTSCHHHHHC
T ss_pred             HHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc------cccCCcCcccCHHHhCC
Confidence            7899999999   789999999999999988776        999999987544321      11246778999999987


Q ss_pred             -CCCCchhhHHHHHHHHHHHHhC-CCCcccC
Q 043407           74 -GDYNEKCDVFSFGVLLLVLLTG-QKLYSID  102 (110)
Q Consensus        74 -~~~~~~~d~~s~g~~~~~~~~g-~~p~~~~  102 (110)
                       ..++.++|+||+|+++|++++| ..||...
T Consensus       192 ~~~~~~~~DiwslG~il~el~~g~~~~~~~~  222 (289)
T 4fvq_A          192 PKNLNLATDKWSFGTTLWEICSGGDKPLSAL  222 (289)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             CCCCCchhHHHHHHHHHHHHHcCCCCCcccc
Confidence             6689999999999999999995 4555443

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.90  E-value=5.5e-24  Score=131.53  Aligned_cols=91  Identities=21%  Similarity=0.317  Sum_probs=75.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC-------------------CceEEecccccccCCCCCcceeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-------------------HVAKLFDFSLAESIPDGETHIKDAIPIGI   62 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~-------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~   62 (110)
                      |++.|+.|||   +.+++|+||||.||+++.+                   ..++++|||.+........      ..++
T Consensus       123 qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~------~~gt  193 (289)
T 1x8b_A          123 QVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV------EEGD  193 (289)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCC------CCCC
T ss_pred             HHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccc------cCCC
Confidence            7899999999   7899999999999999843                   4789999999876544321      2478


Q ss_pred             ccccccceeccC-CCCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           63 MGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        63 ~~~~~pe~~~~~-~~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +.|+|||.+... .++.++|+||+|++++++++|..++..
T Consensus       194 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~  233 (289)
T 1x8b_A          194 SRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN  233 (289)
T ss_dssp             GGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred             ccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence            899999998765 456899999999999999999877643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.90  E-value=7e-25  Score=136.75  Aligned_cols=97  Identities=23%  Similarity=0.342  Sum_probs=77.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.++.++++|||++........  ......+++.|+|||.+.     ...+
T Consensus       125 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  199 (302)
T 2j7t_A          125 QMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ--KRDSFIGTPYWMAPEVVMCETMKDTPY  199 (302)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH--C-----CCGGGCCHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc--ccccccCChhhcCCeeeccccCCCCCC
Confidence            7889999999   78999999999999999999999999998643211100  111225788999999883     5667


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCC
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +.++|+||+|++++++++|..||...+
T Consensus       200 ~~~~Di~slG~il~~l~~g~~p~~~~~  226 (302)
T 2j7t_A          200 DYKADIWSLGITLIEMAQIEPPHHELN  226 (302)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCccCC
Confidence            899999999999999999999997654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.90  E-value=4e-24  Score=133.99  Aligned_cols=93  Identities=26%  Similarity=0.410  Sum_probs=79.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCC-ch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~-~~   79 (110)
                      |++.|+.|||   +.+++|+||||.||+++ .++.++++|||++........    ....++..|++||.+....+. .+
T Consensus       147 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~  219 (312)
T 2iwi_A          147 QVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY----TDFDGTRVYSPPEWISRHQYHALP  219 (312)
T ss_dssp             HHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCB----CCCCSCTTTSCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcc----cccCCcccccCceeeecCCCCCcc
Confidence            7899999999   78999999999999998 788999999999876543321    122578899999998776654 58


Q ss_pred             hhHHHHHHHHHHHHhCCCCccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      +|+||+|++++++++|..||..
T Consensus       220 ~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          220 ATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCS
T ss_pred             chHHHHHHHHHHHHHCCCCCCC
Confidence            9999999999999999999964

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.90  E-value=3.9e-24  Score=134.22  Aligned_cols=97  Identities=20%  Similarity=0.326  Sum_probs=78.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-------ecccccccccccccceeccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-------KDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++..........       ......+++.|+|||.+...
T Consensus       142 qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  218 (317)
T 2buj_A          142 GICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ  218 (317)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccC
Confidence            7899999999   7899999999999999999999999999876543211100       00122467889999988755


Q ss_pred             C---CCchhhHHHHHHHHHHHHhCCCCccc
Q 043407           75 D---YNEKCDVFSFGVLLLVLLTGQKLYSI  101 (110)
Q Consensus        75 ~---~~~~~d~~s~g~~~~~~~~g~~p~~~  101 (110)
                      .   ++.++|+||+|+++|++++|..||..
T Consensus       219 ~~~~~~~~~Di~slG~il~el~~g~~p~~~  248 (317)
T 2buj_A          219 SHCVIDERTDVWSLGCVLYAMMFGEGPYDM  248 (317)
T ss_dssp             SEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred             CCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence            4   57899999999999999999999964

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.4e-23  Score=143.21  Aligned_cols=90  Identities=30%  Similarity=0.414  Sum_probs=77.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.+ .++++|||+++.....      ....|++.|++||++.... +.++|
T Consensus       190 qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~~-~~~sD  258 (681)
T 2pzi_A          190 EILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTGP-TVATD  258 (681)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHCS-CHHHH
T ss_pred             HHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHcCCC-CCcee
Confidence            7899999999   7899999999999999875 8999999998765443      2235889999999887654 88999


Q ss_pred             HHHHHHHHHHHHhCCCCcccC
Q 043407           82 VFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +||+|++++++++|..||.+.
T Consensus       259 i~slG~~l~~l~~g~~~~~~~  279 (681)
T 2pzi_A          259 IYTVGRTLAALTLDLPTRNGR  279 (681)
T ss_dssp             HHHHHHHHHHHHSCCCEETTE
T ss_pred             hhhhHHHHHHHHhCCCCCccc
Confidence            999999999999999888653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.89  E-value=1.4e-23  Score=130.22  Aligned_cols=96  Identities=29%  Similarity=0.558  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC---CceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||+|.||+++.+   ..++++|||++.........   ....+++.|++||.+.+ .++.
T Consensus       129 qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~  201 (287)
T 2wei_A          129 QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGTAYYIAPEVLRG-TYDE  201 (287)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSC---SCHHHHHTTCCHHHHTT-CCCT
T ss_pred             HHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCcc---ccccCcccccChHHhcC-CCCC
Confidence            7889999999   7899999999999999754   46999999998765433221   12247788999998765 4789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++++++|..||.+.+.
T Consensus       202 ~~Di~slG~~l~~l~~g~~p~~~~~~  227 (287)
T 2wei_A          202 KCDVWSAGVILYILLSGTPPFYGKNE  227 (287)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             chhhHhHHHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999976543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.89  E-value=4.7e-23  Score=140.12  Aligned_cols=95  Identities=26%  Similarity=0.505  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCc---eEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.   ++++|||++.........   ....+++.|+|||.+.+..++.
T Consensus       129 QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~---~~~~gt~~Y~APE~l~~~~~s~  202 (676)
T 3qa8_A          129 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC---TEFVGTLQYLAPELLEQKKYTV  202 (676)
T ss_dssp             HHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCC---CCCCSCCTTCSSCSSCCSCCST
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccccccccccccccc---ccccCCcccCChHHhccCCCCc
Confidence            6889999999   789999999999999986654   899999998765433221   2235888999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccC
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      ++|+||+|+++|++++|..||.+.
T Consensus       203 ksDIwSLGviLyeLltG~~Pf~~~  226 (676)
T 3qa8_A          203 TVDYWSFGTLAFECITGFRPFLPN  226 (676)
T ss_dssp             THHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhHHHHHHHHHHHHHHCCCCCCcc
Confidence            999999999999999999999653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.88  E-value=4.7e-23  Score=128.19  Aligned_cols=90  Identities=31%  Similarity=0.537  Sum_probs=70.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCc------------ceecccccccccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------------HIKDAIPIGIMGFVATE   69 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~~~pe   69 (110)
                      |++.|+.|||   +.+++|+||||.||+++.++.++++|||++........            ........+++.|+|||
T Consensus       124 qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (303)
T 1zy4_A          124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE  200 (303)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHH
T ss_pred             HHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcc
Confidence            7889999999   78999999999999999999999999999876532210            11112335788999999


Q ss_pred             eeccC-CCCchhhHHHHHHHHHHHHh
Q 043407           70 YVTTG-DYNEKCDVFSFGVLLLVLLT   94 (110)
Q Consensus        70 ~~~~~-~~~~~~d~~s~g~~~~~~~~   94 (110)
                      .+.+. .++.++|+||+|+++|++++
T Consensus       201 ~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          201 VLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             HHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             cccCCCCCcchhhHHHHHHHHHHHHh
Confidence            98764 58899999999999999997

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.87  E-value=2.5e-24  Score=144.52  Aligned_cols=89  Identities=15%  Similarity=0.078  Sum_probs=58.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|+|   +.+|+||||||.|||++.++.+||+|||+++.........  ....||+.|++||++.+. ....+|
T Consensus       347 QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~--~t~vGTp~YmAPE~l~g~-~~~~~d  420 (569)
T 4azs_A          347 SLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP--TNLVQSFFVFVNELFAEN-KSWNGF  420 (569)
T ss_dssp             HHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS--HHHHHHHHHHHHHHC----------
T ss_pred             HHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc--cCceechhhccHHHhCCC-CCCccc
Confidence            7899999999   8999999999999999999999999999998665433222  234699999999998754 456789


Q ss_pred             HHHHHHHHHHHHhCC
Q 043407           82 VFSFGVLLLVLLTGQ   96 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~   96 (110)
                      +|++|+..+++.++.
T Consensus       421 ~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          421 WRSAPVHPFNLPQPW  435 (569)
T ss_dssp             --------CCCCTTH
T ss_pred             ccccccchhhhcccc
Confidence            999998877655443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.86  E-value=4.5e-23  Score=130.54  Aligned_cols=90  Identities=13%  Similarity=0.169  Sum_probs=75.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC--------------------ceEEecccccccCCCCCcceecccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--------------------VAKLFDFSLAESIPDGETHIKDAIPIG   61 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~   61 (110)
                      |++.||.|||.  +.+++||||||+||+++.++                    .+|++|||+++.....       ...|
T Consensus       169 qi~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~g  239 (336)
T 2vuw_A          169 QLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVF  239 (336)
T ss_dssp             HHHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEEC
T ss_pred             HHHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEE
Confidence            78999999992  37899999999999998876                    8999999998765432       2268


Q ss_pred             cccccccceeccCCCCchhhHHHHHHH-HHHHHhCCCCccc
Q 043407           62 IMGFVATEYVTTGDYNEKCDVFSFGVL-LLVLLTGQKLYSI  101 (110)
Q Consensus        62 ~~~~~~pe~~~~~~~~~~~d~~s~g~~-~~~~~~g~~p~~~  101 (110)
                      ++.|+|||++.+.. +.++|+||++.. .+++++|..||.+
T Consensus       240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc
Confidence            89999999998766 899999998666 6778889999864

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.85  E-value=2.1e-21  Score=121.23  Aligned_cols=76  Identities=29%  Similarity=0.638  Sum_probs=63.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|+.|||   +.+++||||||+||+++.   ++.++++|||++....                        ...++.
T Consensus       125 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~  177 (299)
T 3m2w_A          125 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDK  177 (299)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------------------TCGGGG
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc------------------------cccCCc
Confidence            7889999999   799999999999999998   7889999999875432                        123467


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|++++|..||.+.+.
T Consensus       178 ~~DiwslG~il~el~tg~~pf~~~~~  203 (299)
T 3m2w_A          178 SCDMWSLGVIMYILLCGYPPFYSNHG  203 (299)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCC---
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence            89999999999999999999976543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.81  E-value=3.1e-20  Score=115.59  Aligned_cols=73  Identities=18%  Similarity=0.084  Sum_probs=62.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.+++++++.                      ++       .++.++|
T Consensus       137 ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~----------------------~~-------~~~~~~D  184 (286)
T 3uqc_A          137 SLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPAT----------------------MP-------DANPQDD  184 (286)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCC----------------------CT-------TCCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccc----------------------cC-------CCCchhH
Confidence            7899999999   79999999999999999999999884431                      22       2578899


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +||+|+++|++++|+.||.+.+..+
T Consensus       185 i~slG~il~elltg~~Pf~~~~~~~  209 (286)
T 3uqc_A          185 IRGIGASLYALLVNRWPLPEAGVRS  209 (286)
T ss_dssp             HHHHHHHHHHHHHSEECSCCCSBCC
T ss_pred             HHHHHHHHHHHHHCCCCCCcCCcch
Confidence            9999999999999999998876543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.70  E-value=1.1e-18  Score=116.80  Aligned_cols=94  Identities=16%  Similarity=0.206  Sum_probs=75.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-----ecccccccccccccceecc--C
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT--G   74 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~pe~~~~--~   74 (110)
                      |+++|+.|||   +.+++||||||.||+++.  .++++|||+++.........     ......|++.|++||++..  .
T Consensus       439 qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~  513 (540)
T 3en9_A          439 KIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLE  513 (540)
T ss_dssp             HHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHH
Confidence            7899999999   799999999999999998  99999999998765432211     1123468999999999976  4


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcc
Q 043407           75 DYNEKCDVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        75 ~~~~~~d~~s~g~~~~~~~~g~~p~~  100 (110)
                      .|+...|.|+...-..+-+.++.+|.
T Consensus       514 ~Y~~~~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          514 GYKSVYDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred             HHHHHHhHHHHHHHHHHHHHhccccC
Confidence            56777899998887777777776663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.45  E-value=1.3e-14  Score=90.29  Aligned_cols=41  Identities=20%  Similarity=0.255  Sum_probs=38.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      |++.|+.+||   +.+++||||||.||+++ ++.++++|||++..
T Consensus       201 qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~  241 (282)
T 1zar_A          201 MILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE  241 (282)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred             HHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE
Confidence            7899999999   89999999999999999 99999999999854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.19  E-value=2.4e-11  Score=74.57  Aligned_cols=42  Identities=12%  Similarity=0.254  Sum_probs=37.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      |++.++.+||.  +.+++||||||.||+++.  .++++|||++...
T Consensus       178 qi~~~l~~lH~--~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          178 DVVENVKRLYQ--EAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHHHHHHHH--TSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHHHHHHH--HCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            68899999994  379999999999999988  8999999998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.75  E-value=3.7e-09  Score=68.54  Aligned_cols=42  Identities=14%  Similarity=0.256  Sum_probs=36.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC----------ceEEeccccccc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----------VAKLFDFSLAES   46 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~----------~~~l~dfg~~~~   46 (110)
                      |++.++.+||   +.+++||||||.||+++.++          .+.++||+-+..
T Consensus       213 qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          213 DLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            7889999999   78999999999999997665          378999987644

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.85  E-value=1.2e-05  Score=48.64  Aligned_cols=30  Identities=10%  Similarity=0.195  Sum_probs=25.3

Q ss_pred             CeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           17 PIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        17 ~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      .++|+|++|.||+++.++.+.++||+.+..
T Consensus       185 ~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence            399999999999998776667999987643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.69  E-value=1.7e-05  Score=48.29  Aligned_cols=30  Identities=13%  Similarity=0.217  Sum_probs=25.1

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..++|+|+++.||+++.+..+.++||+.+.
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence            468999999999999876666899998653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.61  E-value=5.7e-06  Score=51.63  Aligned_cols=84  Identities=17%  Similarity=0.212  Sum_probs=48.9

Q ss_pred             CCCeEEcCCCCCceEECC--CCceEEecccccccCCCCCcceecccc---ccc-------ccc--cc-cceeccCCCCch
Q 043407           15 PRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIPDGETHIKDAIP---IGI-------MGF--VA-TEYVTTGDYNEK   79 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~---~~~-------~~~--~~-pe~~~~~~~~~~   79 (110)
                      ...++|+|+++.||+++.  ...+.++||+.+...............   .+.       ..|  .. |+....  ....
T Consensus       190 ~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r--~~~~  267 (304)
T 3sg8_A          190 YPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK--YRMK  267 (304)
T ss_dssp             CCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH--HHHH
T ss_pred             CceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH--HHHH
Confidence            357899999999999987  456789999877543221110000000   000       001  01 111100  1122


Q ss_pred             hhHHHHHHHHHHHHhCCCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~  100 (110)
                      .+.|+++.++|.+.+|..+|-
T Consensus       268 ~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          268 EKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHH
Confidence            578999999999999988763

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.39  E-value=0.00012  Score=46.57  Aligned_cols=31  Identities=19%  Similarity=0.439  Sum_probs=26.0

Q ss_pred             CCeEEcCCCCCceEECCCCc--eEEeccccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHV--AKLFDFSLAES   46 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~--~~l~dfg~~~~   46 (110)
                      ..++|+|+++.||+++.++.  +.++||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            57999999999999987653  68999998754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.78  E-value=0.00084  Score=42.10  Aligned_cols=32  Identities=9%  Similarity=0.161  Sum_probs=28.2

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+++.|++++.++.+.++||+.+..
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            57899999999999998778899999987643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.55  E-value=0.0014  Score=42.76  Aligned_cols=32  Identities=9%  Similarity=0.259  Sum_probs=27.6

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ...++|+|+++.||+++.++ +.++||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            67899999999999998776 999999877543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.38  E-value=0.0017  Score=39.54  Aligned_cols=30  Identities=17%  Similarity=0.338  Sum_probs=25.7

Q ss_pred             CeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           17 PIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        17 ~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      .++|+|+.+.||+++..+.+.++||+.+..
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            589999999999998877778999987643

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.19  E-value=0.0016  Score=40.72  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=26.2

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..+++|+|+.+.||+++.+..+.++||+.+.
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            3578999999999999877666899998764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=96.11  E-value=0.0031  Score=39.70  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=27.8

Q ss_pred             CCCeEEcCCCCCceEECCC----CceEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~~~   47 (110)
                      ...++|+|+.+.||+++.+    +.+.++||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            4689999999999999874    67899999877544

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.04  E-value=0.0023  Score=40.57  Aligned_cols=32  Identities=6%  Similarity=0.349  Sum_probs=26.3

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.||+++....+.++||+.+..
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            46799999999999998644578999987654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.97  E-value=0.0047  Score=38.62  Aligned_cols=33  Identities=12%  Similarity=0.177  Sum_probs=26.7

Q ss_pred             CCCeEEcCCCCCceEECC---CCc-eEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDE---DHV-AKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~---~~~-~~l~dfg~~~~~   47 (110)
                      ...++|+|+++.|++++.   ++. +.++||+.+...
T Consensus       189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             CCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence            568899999999999987   344 589999876543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.38  E-value=0.008  Score=37.60  Aligned_cols=30  Identities=17%  Similarity=0.184  Sum_probs=25.4

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+++.||+++ + .+.++||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            45789999999999998 4 889999987654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.21  E-value=0.013  Score=37.81  Aligned_cols=32  Identities=19%  Similarity=0.215  Sum_probs=26.4

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ...++|+|+.+.||+++.+ .+.++||..+...
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G  257 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFYG  257 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence            4689999999999999765 4899999876543

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=95.10  E-value=0.011  Score=37.69  Aligned_cols=30  Identities=13%  Similarity=0.286  Sum_probs=24.3

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.||+++.+. +.++||+.+.
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            35789999999999997654 8999997654

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=94.89  E-value=0.011  Score=37.57  Aligned_cols=32  Identities=9%  Similarity=0.199  Sum_probs=27.3

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.|++++.++.+.++||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            35799999999999998778899999976643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=94.88  E-value=0.014  Score=36.28  Aligned_cols=31  Identities=13%  Similarity=0.145  Sum_probs=25.4

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ...++|+|+.+.|++ ..++.+.++||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            456899999999999 5566789999987643

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=94.41  E-value=0.029  Score=37.30  Aligned_cols=17  Identities=18%  Similarity=0.215  Sum_probs=15.1

Q ss_pred             CCCeEEcCCCCCceEEC
Q 043407           15 PRPIVFKNIKLSSILFD   31 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~   31 (110)
                      ...++|+|+.+.||+++
T Consensus       289 ~~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          289 PIVLCHCDLLSSNIINT  305 (458)
T ss_dssp             CEEEECSCCCGGGEEEC
T ss_pred             CeeEEecCCCCCcEEee
Confidence            35789999999999998

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=94.33  E-value=0.019  Score=37.69  Aligned_cols=31  Identities=23%  Similarity=0.389  Sum_probs=24.6

Q ss_pred             CCCeEEcCCCCCceEECCC----------------------------CceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDED----------------------------HVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~----------------------------~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.||+++.+                            +.+.++||+.+.
T Consensus       248 ~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~  306 (429)
T 1nw1_A          248 PVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  306 (429)
T ss_dssp             CEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             CeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCC
Confidence            3468999999999999775                            678999997664

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=93.73  E-value=0.039  Score=35.78  Aligned_cols=31  Identities=23%  Similarity=0.374  Sum_probs=26.4

Q ss_pred             CCCeEEcCCCCCceEECCC----CceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~----~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            4578999999999999766    688999998764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=93.07  E-value=0.067  Score=34.74  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=24.1

Q ss_pred             CeEEcCCCCCceEE------CCCCceEEecccccc
Q 043407           17 PIVFKNIKLSSILF------DEDHVAKLFDFSLAE   45 (110)
Q Consensus        17 ~~~h~dl~~~nil~------~~~~~~~l~dfg~~~   45 (110)
                      .++|.|+.+.||++      +.+..+.++||..+.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            46799999999999      445779999998764

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=91.52  E-value=0.1  Score=34.41  Aligned_cols=30  Identities=7%  Similarity=0.313  Sum_probs=25.8

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ...++|+|+.+.|++ +.++.+.++||..+.
T Consensus       261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             CEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             CceEECCCCCcccee-cCCCcEEEEecccCC
Confidence            457899999999999 777889999998764

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=90.94  E-value=0.098  Score=32.99  Aligned_cols=27  Identities=11%  Similarity=0.139  Sum_probs=23.5

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFS   42 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg   42 (110)
                      ...++|+|+.+.|++++.++ ..++|+.
T Consensus       206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          206 KPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            46899999999999998877 8889974

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=89.32  E-value=0.15  Score=31.38  Aligned_cols=25  Identities=16%  Similarity=0.399  Sum_probs=20.4

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEec
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFD   40 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~d   40 (110)
                      ...++|+|+.+.|++++.++. .++|
T Consensus       187 ~p~LvHGDlw~gNvl~~~~g~-~~iD  211 (288)
T 3f7w_A          187 PPARIHGDLWNGNVLWQDDGA-VVID  211 (288)
T ss_dssp             CCEEECSCCSGGGEEEETTEE-EECS
T ss_pred             CCeeeecCCCCCcEEEcCCCe-EEEe
Confidence            457999999999999988774 4555

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=81.18  E-value=2.9  Score=25.12  Aligned_cols=32  Identities=9%  Similarity=0.157  Sum_probs=26.3

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ..-.+--+.|+|++++.++.+++.-.|+...+
T Consensus       103 ~~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~l  134 (219)
T 4ano_A          103 ARRLIFIVCPENLMFNRALEPFFLHVGVKESL  134 (219)
T ss_dssp             SSSEECCCCGGGEEECTTCCEEESCCEETTTB
T ss_pred             hCceeEEEeCceEEEeCCCcEEEEEcCCcccC
Confidence            45677789999999999999999988875433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	110
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-21
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-18
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	9e-18
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-17
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-17
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-16
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-16
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-16
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-15
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-15
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-15
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-14
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-14
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-14
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-14
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	9e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-13
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-13
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-13
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-13
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-13
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-12
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-12
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-11
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-11
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-10
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-10
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	8e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-08
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-06

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (205), Expect = 3e-21
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           + A  + YLH    + I+ +++K ++I   ED   K+ DF LA          +     G
Sbjct: 112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168

Query: 62  IMGFVATEYVTTGD---YNEKCDVFSFGVLLLVLLTGQKLYS 100
            + ++A E +   D   Y+ + DV++FG++L  L+TGQ  YS
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 3e-20
 Identities = 22/110 (20%), Positives = 50/110 (45%), Gaps = 6/110 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           + +   L YL       I+ +++K S+IL +     KL DF ++  + D   +      +
Sbjct: 111 IAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS----FV 164

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
           G   +++ E +    Y+ + D++S G+ L+ +  G+      +A +   +
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 1e-18
 Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+ANAL+Y H    + ++ ++IK  ++L       K+ DF  +   P            G
Sbjct: 114 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT----LCG 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
            + ++  E +    ++EK D++S GVL    L G+  + 
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 205

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 3e-18
 Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 121 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KF 176

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
            + + A E    G +  K DV+SFG+LL  L T  ++ 
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 214

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 5e-18
 Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 4/101 (3%)

Query: 2   EIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++  AL   H        ++ +++K +++  D     KL DF LA  +    +  K  + 
Sbjct: 117 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 176

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
                +++ E +    YNEK D++S G LL  L      ++
Sbjct: 177 T--PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 215

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 7e-18
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I   ++       +G
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 178

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E VT   Y  K D++S G++ + ++ G+  Y 
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.1 bits (181), Expect = 9e-18
 Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  +AYL     R  V +++   + L  E+ V K+ DF L+ +I   + +  D     
Sbjct: 148 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI 204

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            + ++  E +    Y  + DV+++GV+L  + +   
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 1e-17
 Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++IA  + YL     R +V +++   ++L       K+ DF LA+ +   E         
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
             + ++A E +    Y  + DV+S+GV +  L+T    
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 212

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 6e-17
 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 3/98 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI +AL YLH    + I+ +++K  +IL +ED   ++ DF  A+ +       +    +G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 172

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              +V+ E +T     +  D+++ G ++  L+ G   +
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 8e-17
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   + YLH      I  ++IK  ++L DE    K+ DF LA                G
Sbjct: 111 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167

Query: 62  IMGFVATEYVTTGDYN-EKCDVFSFGVLLLVLLTGQKLY 99
            + +VA E +   +++ E  DV+S G++L  +L G+  +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 1e-16
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + +L     +  V +++   ++L     V K+ DF LA  I     ++       
Sbjct: 172 QVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL 228

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
            + ++A E +  G Y  K DV+S+G+LL  + +    
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 265

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 1e-16
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +  +AL YLH      I+ +++K  +ILF  D   KL DF ++               IG
Sbjct: 118 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIG 172

Query: 62  IMGFVATEYVTTGD-----YNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E V         Y+ K DV+S G+ L+ +   +  + 
Sbjct: 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 216

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 1e-16
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-F 172

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
            + + A E +  G +  K DV+SFG+LL  ++T  ++ 
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 2e-16
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + +L     R  + +++   +IL  E +V K+ DF LA  I     +++     
Sbjct: 141 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 197

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
             + ++A E +    Y  + DV+SFGVLL  + +           D  + 
Sbjct: 198 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 247

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 4e-16
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++   +AYL       ++ +++   + L  E+ V K+ DF +   + D +         
Sbjct: 108 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK- 163

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
             + + + E  +   Y+ K DV+SFGVL+  + +  K+   + 
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 206

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 69.3 bits (169), Expect = 5e-16
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 12/101 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                LAYLH      ++ +++K  +IL  E  + KL DF  A  +    +       +G
Sbjct: 123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF------VG 173

Query: 62  IMGFVATEYVTT---GDYNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E +     G Y+ K DV+S G+  + L   +   
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 5e-16
 Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++  A+ YL     +  + +++   + L ++  V K+ DF L+  + D E          
Sbjct: 108 DVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK-F 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
            + +   E +    ++ K D+++FGVL+  + +  K+
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 7e-16
 Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI- 60
           +++  + YL        V +++   ++L    H AK+ DF L++++   E + K      
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
             + + A E +    ++ K DV+SFGVL+    +  + 
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.2 bits (166), Expect = 1e-15
 Identities = 20/100 (20%), Positives = 44/100 (44%), Gaps = 6/100 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            IA  + YL        V +++   +IL + + V K+ DF L+  + D  +       +G
Sbjct: 136 GIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 192

Query: 62  IMG---FVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
                 + A E +    +    DV+S+G+++  +++  + 
Sbjct: 193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 232

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 3e-15
 Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 8/98 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++  A+ YL        V +++   ++L  ED+VAK+ DF L +     +         
Sbjct: 110 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-----K 161

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
             + + A E +    ++ K DV+SFG+LL  + +  ++
Sbjct: 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 199

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 4e-15
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + YL     +  + +++   +IL  E++VAK+ DF L+             +P+
Sbjct: 134 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 190

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
             M   A E +    Y    DV+S+GVLL  +++         
Sbjct: 191 RWM---AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 230

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 5e-15
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 2/96 (2%)

Query: 10  LHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP--IGIMGFVA 67
           +     +  V +++   + + DE    K+ DF LA  + D E             + ++A
Sbjct: 143 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 202

Query: 68  TEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
            E + T  +  K DV+SFGVLL  L+T       D 
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 238

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 5e-15
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +I   L +LH   P PI+ +++K  +I         K+ D  LA               I
Sbjct: 120 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VI 174

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G   F+A E      Y+E  DV++FG+ +L + T +  YS
Sbjct: 175 GTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYS 213

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.3 bits (161), Expect = 9e-15
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 8/109 (7%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           I   L ++H    R +V++++K ++IL DE    ++ D  LA      + H       G 
Sbjct: 116 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GT 168

Query: 63  MGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
            G++A E +  G  Y+   D FS G +L  LL G   +   +  D+H +
Sbjct: 169 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 217

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 9e-15
 Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + YL     +  + +++   ++L  ED+V K+ DF LA  I   + + K     
Sbjct: 142 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
             + ++A E +    Y  + DV+SFGVLL  + T    
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 236

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 1e-14
 Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 13/122 (10%)

Query: 1   MEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +  A+ LA+LH+          I  +++K  +IL  ++    + D  LA         I 
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166

Query: 56  DAI--PIGIMGFVATEYVTT------GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDR 107
            A    +G   ++A E +         +  ++ D+++ G++   +     +  I E    
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226

Query: 108 HW 109
            +
Sbjct: 227 PY 228

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 64.7 bits (157), Expect = 2e-14
 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            +I++A+ YL     +  + +++   + L  E+H+ K+ DF L+  +             
Sbjct: 122 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK- 177

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
             + + A E +    ++ K DV++FGVLL  + T     
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 2e-14
 Identities = 19/98 (19%), Positives = 47/98 (47%), Gaps = 4/98 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIPI 60
           +++  + YL     +  V +++   ++L    H AK+ DF L++++  D   +   +   
Sbjct: 117 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 173

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
             + + A E +    ++ + DV+S+GV +   L+  + 
Sbjct: 174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 211

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.7 bits (157), Expect = 2e-14
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 8/99 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            E+  AL YLH    + I+++++K  +IL D++   K+ DF  A+ +PD    +      
Sbjct: 111 AEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL-----C 162

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
           G   ++A E V+T  YN+  D +SFG+L+  +L G   +
Sbjct: 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 201

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 65.1 bits (158), Expect = 2e-14
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++   L ++H       V  ++K  +I+F     +  KL DF L   +   ++     + 
Sbjct: 132 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK---VT 185

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
            G   F A E           D++S GVL  +LL+G   +
Sbjct: 186 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 225

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.7 bits (154), Expect = 5e-14
 Identities = 18/101 (17%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAI-PIG 61
           +    A +        V +++   +IL + + V K+ DF L+  + D             
Sbjct: 116 LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 175

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSID 102
            + + A E ++   +    DV+SFG+++  ++T  +    +
Sbjct: 176 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 216

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 9e-14
 Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGETHIKDAI 58
            ++  AL +LH      I   +I+  +I++        K+ +F  A  +  G+      +
Sbjct: 109 HQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RL 162

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
                 + A E       +   D++S G L+ VLL+G   + 
Sbjct: 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 1e-13
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++  +LAY+H      I  ++IK  ++L D D  V KL DF  A+ +  GE ++      
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YIC 184

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
                         DY    DV+S G +L  LL GQ ++  D   D
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (151), Expect = 2e-13
 Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  +A+L     +  + +++   +IL     + K+ DF LA  I +   ++       
Sbjct: 153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
            + ++A E +    Y  + DV+S+G+ L  L +     
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 62.0 bits (150), Expect = 2e-13
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 12/104 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +   +  LH      IV +++K  +IL D+D   KL DF  +  +  GE   +     G
Sbjct: 118 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCG 171

Query: 62  IMGFVATEYVTTGD------YNEKCDVFSFGVLLLVLLTGQKLY 99
              ++A E +          Y ++ D++S GV++  LL G   +
Sbjct: 172 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 215

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 2e-13
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                L YLH      I+ +++K +++L DE+ V KL DF LA+S   G  +      + 
Sbjct: 108 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYTHQVV 162

Query: 62  IMGFVATEYVTTGD-YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
              + A E +     Y    D+++ G +L  LL        D   D
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 208

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.1 bits (150), Expect = 2e-13
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 4/97 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            +++ ALAYL     +  V ++I   ++L   +   KL DF L+  + D   +       
Sbjct: 115 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-K 170

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
             + ++A E +    +    DV+ FGV +  +L    
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 2e-13
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L +LH      +V +++K  +IL       KL DF LA               + 
Sbjct: 124 QLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VVV 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
            + + A E +    Y    D++S G +   +   + L+ 
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 216

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 62.0 bits (150), Expect = 2e-13
 Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 8/100 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIP 59
           +    L ++H      IV  +IK  +I+ +  +    K+ DF LA  +   E      + 
Sbjct: 135 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK---VT 188

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
                F A E V         D+++ GVL  VLL+G   +
Sbjct: 189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 228

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 3e-13
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + IV++++KL +IL D+D   K+ DF + +    G+         G
Sbjct: 111 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCG 165

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
              ++A E +    YN   D +SFGVLL  +L GQ  + 
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 204

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.5 bits (146), Expect = 6e-13
 Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIP 59
           +++A  + YL     +  + +++   ++L     + K+ DF L  ++P  + H +     
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKL 98
                + A E + T  ++   D + FGV L  + T  + 
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-12
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 5/108 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIP 59
            +I   L Y+H      ++ +++K S++L +     K+ DF LA    PD +        
Sbjct: 116 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 172

Query: 60  IGIMGFVATEYVTTGD-YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
           +    + A E +     Y +  D++S G +L  +L+ + ++      D
Sbjct: 173 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 220

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.2 bits (145), Expect = 1e-12
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
            A  ++ L     R +V+++IKL +++ D+D   K+ DF L +        +K     G 
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168

Query: 63  MGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
             ++A E +   DY    D +  GV++  ++ G+  +
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 58.6 bits (141), Expect = 4e-12
 Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPI 60
           +   AL + H      I+ +++K ++I+    +  K+ DF +A +I D    + + A  I
Sbjct: 119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 175

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           G   +++ E       + + DV+S G +L  +LTG+  ++
Sbjct: 176 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 215

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 4e-12
 Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EIA+ +AYL+       V +++   + +  ED   K+ DF +   I + + + K    + 
Sbjct: 141 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 197

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
            + +++ E +  G +    DV+SFGV+L  + T  +
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 233

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.3 bits (140), Expect = 5e-12
 Identities = 14/116 (12%), Positives = 36/116 (31%), Gaps = 7/116 (6%)

Query: 1   MEIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAI 58
            ++   +  +H      R I   N  +        ++  + DF + +   D  T      
Sbjct: 108 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY 167

Query: 59  P-----IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHW 109
                  G   +++       + + + D+ + G + +  L G   +   +A     
Sbjct: 168 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 223

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.4 bits (138), Expect = 1e-11
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 3/99 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++ +A+ YLH         K   L     DED    + DF L++    G          G
Sbjct: 115 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST---ACG 171

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
             G+VA E +    Y++  D +S GV+  +LL G   + 
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 210

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.3 bits (135), Expect = 2e-11
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 9/105 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAI 58
            I  A+ YLH      I  +++K  ++L+     + + KL DF  A+      +      
Sbjct: 119 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 175

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
               +   A E +    Y++ CD++S GV++ +LL G   +  + 
Sbjct: 176 TPYYV---APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH 217

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.0 bits (134), Expect = 3e-11
 Identities = 19/99 (19%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++ N +AY H    R ++ +++K  ++L + +   K+ DF LA +           I   
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT- 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYS 100
           +        + +  Y+   D++S G +   ++ G  L+ 
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 3e-11
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   +  L       I++++IKL +IL D +    L DF L++     ET        G 
Sbjct: 135 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGT 193

Query: 63  MGFVATEYVTTGD--YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHW 109
           + ++A + V  GD  +++  D +S GVL+  LLTG   +++D   +   
Sbjct: 194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 242

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 4e-11
 Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVA----KLFDFSLAESIPDGETHIKDAI 58
           +   L  ++      I   ++K  +I+  + +V     K+ DF LA  I  G        
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 175

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
             G   FVA E V       + D++S GV+  +LL+G   +
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 6e-11
 Identities = 19/101 (18%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP--I 60
           +   L  L+      I+ +++K +++L   D V KL DF LA +    +    +     +
Sbjct: 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRV 182

Query: 61  GIMGFVATEYVTTG-DYNEKCDVFSFGVLLLVLLTGQKLYS 100
             + +   E +    DY    D++  G ++  + T   +  
Sbjct: 183 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 223

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.0 bits (131), Expect = 8e-11
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIP 59
            ++   L Y+H      I+  +IK  ++L +  D    L    +A+              
Sbjct: 132 KQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 189

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
           I    + + E +    +    D++S   L+  L+TG  L+  DE
Sbjct: 190 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 233

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (130), Expect = 1e-10
 Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 4/96 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L + H    R ++ +++K  ++L + +   KL +F LA +           +   
Sbjct: 109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL 165

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQK 97
                         Y+   D++S G +   L    +
Sbjct: 166 WY-RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 1e-10
 Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 6/107 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++   LA+ H      ++ +++K  ++L + +   KL DF LA +           +  
Sbjct: 109 FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-- 163

Query: 61  GIMGFVATE-YVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD 106
             + + A E  +    Y+   D++S G +   ++T + L+  D   D
Sbjct: 164 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 210

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.1 bits (129), Expect = 1e-10
 Identities = 18/117 (15%), Positives = 45/117 (38%), Gaps = 11/117 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           ++ + + Y+H    +  + +++K  + L     + ++  + DF LA+   D  TH     
Sbjct: 111 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 167

Query: 59  P-----IGIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHWL 110
                  G   + +       + + + D+ S G +L+    G   +   +A  +   
Sbjct: 168 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 224

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.0 bits (129), Expect = 2e-10
 Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 8/103 (7%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            +I     YLH      ++++++K  ++L D+    ++ DF  A+ +      +      
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----C 199

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDE 103
           G    +A E + +  YN+  D ++ GVL+  +  G   +  D+
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 5e-10
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++  A+ + H      ++ ++IK  +IL D +    KL DF     + D           
Sbjct: 118 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FD 170

Query: 61  GIMGFVATEYVTTGDY-NEKCDVFSFGVLLLVLLTGQKLYSIDE 103
           G   +   E++    Y      V+S G+LL  ++ G   +  DE
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 8e-10
 Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L Y+H      I+ +++K  ++  +ED   K+ DF LA       T       + 
Sbjct: 129 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTG-----YVV 180

Query: 62  IMGFVATE-YVTTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGDRHW 109
              + A E  +    Y +  D++S G ++  ++TG+ L+   +  D+  
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 229

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 48.7 bits (115), Expect = 1e-08
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 6/96 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI  AL Y H      I+ +++K  +++ D E    +L D+ LAE    G+ +       
Sbjct: 137 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQ 96
                     V    Y+   D++S G +L  ++  +
Sbjct: 194 YFK--GPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 1e-07
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 7/98 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L Y+H      I+ +++K S++  +ED   K+ DF LA    D  T         
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY----VAT 181

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
                    +    YN+  D++S G ++  LLTG+ L+
Sbjct: 182 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 2e-06
 Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   + +LH      I+ +++K S+I+   D   K+ DF LA +             + 
Sbjct: 127 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVV 180

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFGVLLLVLLTGQKLY 99
              + A E +    Y E  D++S G ++  ++  + L+
Sbjct: 181 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	110
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.98
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.98
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.98
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.97
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.95
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.95
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.95
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.95
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.94
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.93
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.38
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.93
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.22
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.08
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.56
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	94.61
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	90.52

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-34  Score=176.54  Aligned_cols=101  Identities=24%  Similarity=0.447  Sum_probs=84.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||+||+++.++.++++|||+++...............||+.|+|||++.+..++.++|
T Consensus       116 qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~D  192 (288)
T d1uu3a_         116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD  192 (288)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHH
T ss_pred             HHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccc
Confidence            7899999999   8999999999999999999999999999998765443333333446999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|+|++|+.||.+.+..
T Consensus       193 iwSlGvilyell~g~~Pf~~~~~~  216 (288)
T d1uu3a_         193 LWALGCIIYQLVAGLPPFRAGNEY  216 (288)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             eehhhHHHHHHhhCCCCCCCcCHH
Confidence            999999999999999999876643

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-34  Score=176.17  Aligned_cols=101  Identities=26%  Similarity=0.416  Sum_probs=86.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~   80 (110)
                      |+++|++|||   +.+++||||||+||+++.++.+|++|||+++...............||+.|+|||++.+..+ +.++
T Consensus       111 qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~  187 (271)
T d1nvra_         111 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  187 (271)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHH
T ss_pred             HHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCce
Confidence            7899999999   79999999999999999999999999999987644333333334479999999999988776 5779


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++||+++|+.||...+..
T Consensus       188 DiwSlGvilyeml~G~~pf~~~~~~  212 (271)
T d1nvra_         188 DVWSCGIVLTAMLAGELPWDQPSDS  212 (271)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSSTT
T ss_pred             eeeHhHHHHHHHHhCCCCCCCCChH
Confidence            9999999999999999999766544

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-34  Score=176.25  Aligned_cols=101  Identities=29%  Similarity=0.440  Sum_probs=80.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC---CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~   78 (110)
                      ||+.||+|||   +++++||||||+||+++.++.+|++|||+++...............|++.|+|||++...   .++.
T Consensus       112 qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~  188 (276)
T d1uwha_         112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF  188 (276)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCH
T ss_pred             HHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCc
Confidence            7899999999   789999999999999999999999999999766543333333344689999999998643   4789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++|+||||+++||+++|+.||.+.+..
T Consensus       189 ~sDiwS~Gv~l~el~tg~~Pf~~~~~~  215 (276)
T d1uwha_         189 QSDVYAFGIVLYELMTGQLPYSNINNR  215 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred             hhhhhhhHHHHHHHHHCCCCCCCCChH
Confidence            999999999999999999999876543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-34  Score=176.51  Aligned_cols=99  Identities=27%  Similarity=0.490  Sum_probs=86.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +++++||||||+||+++.++.+|++|||+++........  .....|++.|+|||++.+..++.++|
T Consensus       124 qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~D  198 (293)
T d1yhwa1         124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVD  198 (293)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC--BCCCCSCGGGCCHHHHSSSCBCTHHH
T ss_pred             HHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccccc--ccccccCCCccChhhhcCCCCCchhc
Confidence            7899999999   799999999999999999999999999999876443322  22336999999999999988999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|+|++|+.||.+.+..
T Consensus       199 iwSlGvilyemltG~~Pf~~~~~~  222 (293)
T d1yhwa1         199 IWSLGIMAIEMIEGEPPYLNENPL  222 (293)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             eehHhHHHHHHhhCCCCCCCCCHH
Confidence            999999999999999999876644

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-34  Score=173.88  Aligned_cols=97  Identities=26%  Similarity=0.476  Sum_probs=86.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.+|++|||+++.......    ....||+.|+|||++.+..++.++|
T Consensus       114 qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~----~~~~Gt~~Y~APE~~~~~~~~~~~D  186 (263)
T d2j4za1         114 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHDEKVD  186 (263)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCC----EETTEEGGGCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCCcc----cccCCCCcccCHHHHcCCCCCchhh
Confidence            7899999999   79999999999999999999999999999976544322    2336899999999999988999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|++++|+.||.+.+..
T Consensus       187 iwSlGvilyell~G~~Pf~~~~~~  210 (263)
T d2j4za1         187 LWSLGVLCYEFLVGKPPFEANTYQ  210 (263)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             hhhHhHHHHHHhcCCCCCCCCCHH
Confidence            999999999999999999877654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1e-33  Score=177.62  Aligned_cols=101  Identities=24%  Similarity=0.399  Sum_probs=88.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+++||+|||   +++|+||||||+||+++.++.+|++|||+++...............+++.|+|||++....++.++|
T Consensus       172 qi~~gl~yLH---~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~D  248 (325)
T d1rjba_         172 QVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD  248 (325)
T ss_dssp             HHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCccee
Confidence            7899999999   7899999999999999999999999999998765544444444446889999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+++ |..||.+.+..
T Consensus       249 iwS~Gvil~emlt~g~~Pf~~~~~~  273 (325)
T d1rjba_         249 VWSYGILLWEIFSLGVNPYPGIPVD  273 (325)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred             ccchhHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999998 89999876543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=3.7e-33  Score=174.55  Aligned_cols=96  Identities=32%  Similarity=0.570  Sum_probs=86.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +++++||||||+||+++.++.+|++|||+++.......     ...|++.|+|||++.+..++.++|
T Consensus       112 qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~-----~~~Gt~~Y~APE~l~~~~y~~~~D  183 (316)
T d1fota_         112 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-----TLCGTPDYIAPEVVSTKPYNKSID  183 (316)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC-----CCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccccc-----cccCcccccCHHHHcCCCCCchhh
Confidence            7899999999   89999999999999999999999999999987654322     236999999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+|+++|+|++|+.||.+.+..
T Consensus       184 iwSlGvilyemltG~~Pf~~~~~~  207 (316)
T d1fota_         184 WWSFGILIYEMLAGYTPFYDSNTM  207 (316)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             ccccchhHHHHHhCCCCCCCcCHH
Confidence            999999999999999999877643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=5.5e-33  Score=175.04  Aligned_cols=99  Identities=27%  Similarity=0.498  Sum_probs=87.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +++++||||||+||+++.++.+|++|||+++........  .....||+.|+|||++.+..++.++|
T Consensus       113 qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~--~~~~~GT~~Y~aPE~~~~~~y~~~~D  187 (337)
T d1o6la_         113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  187 (337)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC--BCCCEECGGGCCGGGGSSSCBCTTHH
T ss_pred             HHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCCcc--cccceeCHHHhhhhhccCCCCChhhc
Confidence            7899999999   899999999999999999999999999999865433222  22346899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|||++|+.||.+.+..
T Consensus       188 iwSlGvilyeml~G~~pf~~~~~~  211 (337)
T d1o6la_         188 WWGLGVVMYEMMCGRLPFYNQDHE  211 (337)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ccchhhHHHHHHHCCCCCCCcCHH
Confidence            999999999999999999887654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=7.4e-33  Score=175.22  Aligned_cols=96  Identities=22%  Similarity=0.417  Sum_probs=85.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.+||+|||+++.......     ...|++.|+|||++.+..++.++|
T Consensus       149 qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~-----~~~Gt~~Y~APE~~~~~~~~~~~D  220 (350)
T d1rdqe_         149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW-----TLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC-----CCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccc-----cccCccccCCHHHHcCCCCCcccc
Confidence            7899999999   89999999999999999999999999999987643322     236899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|+|++|+.||.+.+..
T Consensus       221 iwSlGvilyemltG~~Pf~~~~~~  244 (350)
T d1rdqe_         221 WWALGVLIYEMAAGYPPFFADQPI  244 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ccchhHHHHHHHhCCCCCCCcCHH
Confidence            999999999999999999876543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-33  Score=171.45  Aligned_cols=102  Identities=23%  Similarity=0.326  Sum_probs=75.6

Q ss_pred             cHHHHHHHHhcCC--CCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGF--PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~--~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.||.|||+..  ..+++||||||+||+++.++.+|++|||+++.........  ....|++.|+|||++.+..++.+
T Consensus       117 qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~  194 (269)
T d2java1         117 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYMSPEQMNRMSYNEK  194 (269)
T ss_dssp             HHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCcc--ccCCCCcccCCHHHHcCCCCChH
Confidence            7899999999311  1249999999999999999999999999998765432222  23368999999999998899999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+|+++||+++|+.||.+.+..
T Consensus       195 ~DIwSlGvilyel~tg~~Pf~~~~~~  220 (269)
T d2java1         195 SDIWSLGCLLYELCALMPPFTAFSQK  220 (269)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HHHHhhCHHHHHHhhCCCCCCCCCHH
Confidence            99999999999999999999876543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-33  Score=174.85  Aligned_cols=97  Identities=23%  Similarity=0.412  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCC-CCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|+.|||   + .+|+||||||+||+++.++.+|++|||+++.......    ....||+.|+|||++.+..++.++
T Consensus       112 qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~GT~~Y~APEvl~~~~y~~~~  184 (322)
T d1s9ja_         112 AVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQS  184 (322)
T ss_dssp             HHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-------CCSSCCCCHHHHHCSCCCTTH
T ss_pred             HHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcc----ccccCCccccCchHHcCCCCCcHH
Confidence            7899999999   5 4899999999999999999999999999875432111    123689999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+||+++|+++|+.||.+.+..
T Consensus       185 DiWSlGvil~ell~G~~Pf~~~~~~  209 (322)
T d1s9ja_         185 DIWSMGLSLVEMAVGRYPIPPPDAK  209 (322)
T ss_dssp             HHHHHHHHHHHHHHSSCCSSCCCTT
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHH
Confidence            9999999999999999999876543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-32  Score=171.04  Aligned_cols=100  Identities=25%  Similarity=0.407  Sum_probs=81.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||+|||   +.+++||||||+||+++.++.+||+|||+++...............|++.|+|||.+.+..++.++|
T Consensus       142 qi~~gl~ylH---~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sD  218 (299)
T d1ywna1         142 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  218 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccc
Confidence            7899999999   7999999999999999999999999999998665444444444456899999999999999999999


Q ss_pred             HHHHHHHHHHHHhC-CCCcccCCc
Q 043407           82 VFSFGVLLLVLLTG-QKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g-~~p~~~~~~  104 (110)
                      +||+|+++||++++ ..||.+.+.
T Consensus       219 iwS~Gvil~ellt~~~~p~~~~~~  242 (299)
T d1ywna1         219 VWSFGVLLWEIFSLGASPYPGVKI  242 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             eeehHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999986 568876544

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=6.1e-32  Score=171.74  Aligned_cols=98  Identities=29%  Similarity=0.516  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc-CCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~   80 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.+|++|||+++.......    ....|++.|+|||++.. ..++.++
T Consensus       115 qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~----~~~~GT~~y~APE~~~~~~~~~~~~  187 (364)
T d1omwa3         115 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSA  187 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCC----CSCCSCGGGCCHHHHSTTCCCCTHH
T ss_pred             HHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecCCCcc----cccccccccchhHHhhcCCCCCccc
Confidence            7899999999   89999999999999999999999999999986654322    23368999999999865 4689999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      |+||+||++|||++|+.||.+.+..+
T Consensus       188 DiwSlGvilyemltG~~Pf~~~~~~~  213 (364)
T d1omwa3         188 DWFSLGCMLFKLLRGHSPFRQHKTKD  213 (364)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCSSCSSC
T ss_pred             chhHHHHHHHHHHhCCCCCCCCCHHH
Confidence            99999999999999999998765543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-32  Score=170.68  Aligned_cols=100  Identities=27%  Similarity=0.347  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceec-----cCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~-----~~~~   76 (110)
                      |++.||.|||   +.+++||||||+||+++.++.+|++|||++........  ......|++.|+|||++.     ...+
T Consensus       118 qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~--~~~~~~Gt~~y~APE~l~~~~~~~~~y  192 (288)
T d2jfla1         118 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--RRDSFIGTPYWMAPEVVMCETSKDRPY  192 (288)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH--HHTCCCSCCTTCCHHHHTTCSTTTSST
T ss_pred             HHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCcc--cccccccccccCCHHHHhhcccCCCCC
Confidence            7899999999   79999999999999999999999999999865432111  122336899999999984     3457


Q ss_pred             CchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           77 NEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        77 ~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      +.++|+||+||++||+++|+.||.+.+..+
T Consensus       193 ~~k~DiwSlGvilyemltg~~Pf~~~~~~~  222 (288)
T d2jfla1         193 DYKADVWSLGITLIEMAEIEPPHHELNPMR  222 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTSCGGG
T ss_pred             ChhhhHHHHHHHHHHHhhCCCCCCCCCHHH
Confidence            899999999999999999999998776544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.1e-32  Score=165.61  Aligned_cols=95  Identities=28%  Similarity=0.453  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCC--eEEcCCCCCceEEC-CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~h~dl~~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      ||++|++|||   +++  ++||||||+||+++ .++.+|++|||+++.......    ....||+.|+|||++.+ .++.
T Consensus       120 qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~----~~~~GT~~Y~aPE~~~~-~~~~  191 (270)
T d1t4ha_         120 QILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA----KAVIGTPEFMAPEMYEE-KYDE  191 (270)
T ss_dssp             HHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB----EESCSSCCCCCGGGGGT-CCCT
T ss_pred             HHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCcc----CCcccCccccCHHHhCC-CCCC
Confidence            7899999999   666  99999999999996 478999999999975433221    23368999999998864 5899


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|+++|||++|+.||.+.+.
T Consensus       192 ~~DIwSlGvilyel~~g~~Pf~~~~~  217 (270)
T d1t4ha_         192 SVDVYAFGMCMLEMATSEYPYSECQN  217 (270)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCSS
T ss_pred             cCchhhHHHHHHHHHHCCCCCCCccc
Confidence            99999999999999999999976543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.9e-32  Score=169.48  Aligned_cols=95  Identities=27%  Similarity=0.403  Sum_probs=82.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc---CCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~---~~~~~   78 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.+|++|||++.......      ...||+.|+|||++.+   ..++.
T Consensus       123 qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~------~~~GT~~Y~APE~~~~~~~~~y~~  193 (309)
T d1u5ra_         123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDG  193 (309)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC------CCCSCGGGCCHHHHTTTTSCCBCT
T ss_pred             HHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCCCC------ccccCccccCHHHHhccCCCCcCc
Confidence            7899999999   7999999999999999999999999999987654322      2368999999999864   35788


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++|+||+|+++||+++|..||.+.+..
T Consensus       194 ~~DiwSlGvilyel~~g~~Pf~~~~~~  220 (309)
T d1u5ra_         194 KVDVWSLGITCIELAERKPPLFNMNAM  220 (309)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             hhhhhhHHHHHHHHHHCCCCCCCCCHH
Confidence            999999999999999999999876543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.3e-32  Score=170.28  Aligned_cols=102  Identities=26%  Similarity=0.402  Sum_probs=84.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.+|++|||+++...............|++.|+|||.+....++.++|
T Consensus       119 qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sD  195 (317)
T d1xkka_         119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD  195 (317)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhh
Confidence            7899999999   7899999999999999999999999999998765443333333335788999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      +||||+++||+++ |..||.+.+..+
T Consensus       196 vwS~Gvil~el~t~g~~p~~~~~~~~  221 (317)
T d1xkka_         196 VWSYGVTVWELMTFGSKPYDGIPASE  221 (317)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTSCGGG
T ss_pred             hhhHHHHHHHHHHCCCCCCCCCCHHH
Confidence            9999999999998 889998765543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=167.67  Aligned_cols=99  Identities=32%  Similarity=0.543  Sum_probs=86.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|++|||   +.+++||||||.||+++.++.++++|||+++.........  ....|++.|+|||++.+..++.++|
T Consensus       111 qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  185 (320)
T d1xjda_         111 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NTFCGTPDYIAPEILLGQKYNHSVD  185 (320)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB--CCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcccccccc--cccCCCCCcCCHHHHcCCCCCchhh
Confidence            7899999999   7899999999999999999999999999997654333222  2236899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +||+||++|+|++|+.||.+.+..
T Consensus       186 iwSlGvilyemltG~~PF~~~~~~  209 (320)
T d1xjda_         186 WWSFGVLLYEMLIGQSPFHGQDEE  209 (320)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hhhhhHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999999887654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=7.8e-32  Score=167.47  Aligned_cols=101  Identities=21%  Similarity=0.343  Sum_probs=75.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce---ecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI---KDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.+|++|||+++.........   ......+++.|+|||.+....++.
T Consensus       136 qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  212 (299)
T d1jpaa_         136 GIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS  212 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCH
T ss_pred             HHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCc
Confidence            7899999999   7999999999999999999999999999997654322211   111224678899999999999999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      ++|+||||+++||+++ |+.||.+.+..
T Consensus       213 ~sDvwS~Gvvl~el~t~g~~Pf~~~~~~  240 (299)
T d1jpaa_         213 ASDVWSYGIVMWEVMSYGERPYWDMTNQ  240 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             ccccccchHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999998 89999876543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=166.66  Aligned_cols=97  Identities=21%  Similarity=0.329  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++..+.++++|||+++......   ......||+.|+|||++.+..++.++|
T Consensus       124 qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~---~~~~~~gT~~Y~APE~~~~~~y~~~~D  197 (305)
T d1blxa_         124 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVD  197 (305)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccc---cCCCcccChhhcCcchhcCCCCChheh
Confidence            7899999999   8999999999999999999999999999976543222   223346899999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+||++|||++|+.||.+.+.
T Consensus       198 iwSlG~il~ell~g~~pf~~~~~  220 (305)
T d1blxa_         198 LWSVGCIFAEMFRRKPLFRGSSD  220 (305)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             hhchHHHHHHHHHCCCCCCCCCH
Confidence            99999999999999999987654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.1e-32  Score=166.44  Aligned_cols=101  Identities=22%  Similarity=0.412  Sum_probs=86.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.||+|||   +++++||||||+||+++.++.+|++|||+++......... ......+++.|+|||.+....++.++
T Consensus       117 qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  193 (285)
T d1u59a_         117 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS  193 (285)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccc
Confidence            7899999999   7999999999999999999999999999998765433222 22233578899999999988999999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      |+||||+++||+++ |..||.+.+..
T Consensus       194 DVwS~Gv~l~E~lt~G~~Pf~~~~~~  219 (285)
T d1u59a_         194 DVWSYGVTMWEALSYGQKPYKKMKGP  219 (285)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCTH
T ss_pred             hhhcchHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999998 89999876543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.4e-32  Score=166.66  Aligned_cols=101  Identities=25%  Similarity=0.407  Sum_probs=85.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce-ecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      ||+.||+|||   +.+++||||||+||+++.++.++++|||+++......... ......|++.|+|||.+....++.++
T Consensus       115 qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~s  191 (277)
T d1xbba_         115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS  191 (277)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchh
Confidence            7899999999   7899999999999999999999999999998765433322 22334688899999999988899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      |+||||+++||+++ |+.||.+.+..
T Consensus       192 DiwS~Gv~l~ellt~g~~Pf~~~~~~  217 (277)
T d1xbba_         192 DVWSFGVLMWEAFSYGQKPYRGMKGS  217 (277)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             hhccchhhhhHHhhCCCCCCCCCCHH
Confidence            99999999999998 89999876544

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-31  Score=165.31  Aligned_cols=99  Identities=26%  Similarity=0.339  Sum_probs=84.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      ||++||+|||   +.+++||||||+||+++.++.+|++|||+++.........  ....+++.|+|||++... .++.++
T Consensus       108 qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~  182 (299)
T d1ua2a_         108 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPELLFGARMYGVGV  182 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC--CCSCCCCTTCCHHHHTTCSCCCHHH
T ss_pred             HHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCcccc--cceecChhhccHHHHccCCCCChhh
Confidence            7899999999   8999999999999999999999999999997654433222  223688999999998755 578999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+||++|||++|..||.+.+..
T Consensus       183 DiwSlGvil~el~~g~~pf~~~~~~  207 (299)
T d1ua2a_         183 DMWAVGCILAELLLRVPFLPGDSDL  207 (299)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             hhhhcchHHHHHHhCcCCCCCCCHH
Confidence            9999999999999999999876543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=4.2e-31  Score=167.25  Aligned_cols=98  Identities=26%  Similarity=0.377  Sum_probs=85.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC--CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      ||+.||.|||   +.+++||||||.||+++  .++.++++|||++.........   ....+++.|+|||++.+..++.+
T Consensus       135 qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  208 (352)
T d1koba_         135 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV---KVTTATAEFAAPEIVDREPVGFY  208 (352)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE---EEECSSGGGCCHHHHTTCCBCHH
T ss_pred             HHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCCce---eeccCcccccCHHHHcCCCCCCc
Confidence            7899999999   89999999999999997  5688999999999876543322   22368889999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+||++|+|++|+.||.+.+..
T Consensus       209 ~DiwSlGvilyelltG~~Pf~~~~~~  234 (352)
T d1koba_         209 TDMWAIGVLGYVLLSGLSPFAGEDDL  234 (352)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHH
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999876543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.8e-31  Score=163.96  Aligned_cols=98  Identities=28%  Similarity=0.440  Sum_probs=82.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||+||+++.++.+||+|||+++.......... ....+++.|+|||.+....++.++|
T Consensus       117 qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~-~~~~gt~~y~APE~~~~~~~~~~sD  192 (272)
T d1qpca_         117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSD  192 (272)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC-TTCCCCTTTSCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCccccc-cccCCcccccChHHHhCCCCCchhh
Confidence            7899999999   79999999999999999999999999999987654332222 2335788999999999888999999


Q ss_pred             HHHHHHHHHHHHhC-CCCcccCC
Q 043407           82 VFSFGVLLLVLLTG-QKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g-~~p~~~~~  103 (110)
                      +||||+++||+++| .+|+...+
T Consensus       193 vwS~Gvvl~ellt~~~~~~~~~~  215 (272)
T d1qpca_         193 VWSFGILLTEIVTHGRIPYPGMT  215 (272)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCC
Confidence            99999999999995 45555443

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=4e-31  Score=167.21  Aligned_cols=98  Identities=23%  Similarity=0.397  Sum_probs=84.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC--CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      ||+.||.|||   +.+++||||||+||+++.  ++.+|++|||+++........   ....||+.|+|||++.+..++.+
T Consensus       132 qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~---~~~~gT~~Y~aPEv~~~~~~~~~  205 (350)
T d1koaa2         132 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV---KVTTGTAEFAAPEVAEGKPVGYY  205 (350)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE---EEECSCTTTCCHHHHHTCCBCHH
T ss_pred             HHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheeccccccc---ceecCcccccCHHHHcCCCCChh
Confidence            7899999999   899999999999999964  578999999999876543322   23368999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+||++|+|++|+.||.+.+..
T Consensus       206 ~DiwSlGvilyell~G~~Pf~~~~~~  231 (350)
T d1koaa2         206 TDMWSVGVLSYILLSGLSPFGGENDD  231 (350)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HhhhhhhHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999876543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.4e-31  Score=165.48  Aligned_cols=94  Identities=23%  Similarity=0.366  Sum_probs=80.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +++++||||||+||+++.++.+|++|||+++........... ...+++.|+|||.+....++.++|
T Consensus       123 qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~k~D  198 (287)
T d1opja_         123 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNKFSIKSD  198 (287)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEET-TEEECGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeec-cccccccccChHHHcCCCCCchhh
Confidence            7899999999   789999999999999999999999999999876544333222 224778899999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCc
Q 043407           82 VFSFGVLLLVLLTGQKLY   99 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~   99 (110)
                      +||||+++||+++|..||
T Consensus       199 iwS~Gv~l~ell~~~~p~  216 (287)
T d1opja_         199 VWAFGVLLWEIATYGMSP  216 (287)
T ss_dssp             HHHHHHHHHHHHTTSCCS
T ss_pred             hhhHHHHHHHHHhCCCCC
Confidence            999999999999966554

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.3e-31  Score=165.84  Aligned_cols=97  Identities=28%  Similarity=0.485  Sum_probs=73.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEEC---CCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|++|||   +.+++||||||+||++.   .++.+|++|||+++.......   .....||+.|+|||++.+..++.
T Consensus       115 qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~---~~~~~GT~~y~APE~~~~~~~~~  188 (307)
T d1a06a_         115 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGTPGYVAPEVLAQKPYSK  188 (307)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC---------------------CTTSCHHHHTTCCCCT
T ss_pred             HHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCCCe---eeeeeeCccccCcHHHcCCCCCc
Confidence            7899999999   89999999999999995   468899999999876543221   12336899999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+||++|+|++|..||.+.+.
T Consensus       189 ~~DiwSlGvilyell~g~~Pf~~~~~  214 (307)
T d1a06a_         189 AVDCWSIGVIAYILLCGYPPFYDEND  214 (307)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHhhhhhHHHHHHHhCCCCCCCCCH
Confidence            99999999999999999999987654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2e-31  Score=163.01  Aligned_cols=98  Identities=22%  Similarity=0.410  Sum_probs=74.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||+||+++.++.+|++|||+++.......... ....|++.|+|||.+....++.++|
T Consensus       109 qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~k~D  184 (263)
T d1sm2a_         109 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD  184 (263)
T ss_dssp             HHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCceee-cceecCcccCChHHhcCCCCCchhh
Confidence            7899999999   79999999999999999999999999999876644332222 2235788999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCC
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~  103 (110)
                      +||||+++||+++ |.+||...+
T Consensus       185 VwS~Gvil~el~t~~~~~~~~~~  207 (263)
T d1sm2a_         185 VWSFGVLMWEVFSEGKIPYENRS  207 (263)
T ss_dssp             HHHHHHHHHHHHTTSCCTTCSCC
T ss_pred             hcchHHHHHHHHHCCCCCCCCCC
Confidence            9999999999999 566666544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-30  Score=164.59  Aligned_cols=98  Identities=27%  Similarity=0.516  Sum_probs=84.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcceecccccccccccccceeccCCCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~   78 (110)
                      |++.|++|||   +.+++||||||.||+++.   .+.+|++|||+++........   ....|++.|+|||++.+..++.
T Consensus       119 qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~y~~  192 (335)
T d2ozaa1         119 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDK  192 (335)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCC---CCCSCCCSSCCCCCCCGGGGSH
T ss_pred             HHHHHHHHHH---HcCCccccccccccccccccccccccccccceeeeccCCCcc---ccccCCcccCCcHHHcCCCCCH
Confidence            7899999999   899999999999999975   457999999999866543322   2336899999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      ++|+||+||++|++++|+.||.+.+..
T Consensus       193 ~~DiwSlGvily~lltg~~Pf~~~~~~  219 (335)
T d2ozaa1         193 SCDMWSLGVIMYILLCGYPPFYSNHGL  219 (335)
T ss_dssp             HHHHHHHHHHHHHHTTSSCSCEETTCC
T ss_pred             HHHHHhhchhHHHHhhCCCCCCCCCHH
Confidence            999999999999999999999877654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=5.6e-31  Score=162.00  Aligned_cols=102  Identities=25%  Similarity=0.479  Sum_probs=80.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCC-cceecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++||||||+||+++.++..+++|||.+....... .........|++.|+|||++.+..++.++
T Consensus       119 qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~  195 (277)
T d1o6ya_         119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS  195 (277)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHH
T ss_pred             HHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcce
Confidence            7899999999   8999999999999999999999999999886543222 22222334689999999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      |+||+|+++|+|++|+.||.+.+..+
T Consensus       196 DiwSlGvilyelltG~~Pf~~~~~~~  221 (277)
T d1o6ya_         196 DVYSLGCVLYEVLTGEPPFTGDSPVS  221 (277)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ecccchHHHHHHHhCCCCCCCcCHHH
Confidence            99999999999999999998776543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.9e-31  Score=161.57  Aligned_cols=96  Identities=22%  Similarity=0.331  Sum_probs=74.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.|++|||   +.+++||||||.||+++.++.+||+|||+++........ .......|++.|+|||.+....++.++
T Consensus       118 ~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~s  194 (283)
T d1mqba_         118 GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS  194 (283)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHH
T ss_pred             HHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcc
Confidence            7899999999   799999999999999999999999999999765433221 122223578899999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~  100 (110)
                      |+||||+++||++++..|+.
T Consensus       195 DI~S~Gvil~el~t~~~~~~  214 (283)
T d1mqba_         195 DVWSFGIVMWEVMTYGERPY  214 (283)
T ss_dssp             HHHHHHHHHHHHHTTSCCTT
T ss_pred             cccccHHHHHHHHhCCCCcc
Confidence            99999999999999655543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.8e-31  Score=165.04  Aligned_cols=102  Identities=23%  Similarity=0.369  Sum_probs=85.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||+|||   +.+++||||||+||+++.++.+|++|||+++...............+++.|+|||.+....++.++|
T Consensus       148 qi~~gl~ylH---~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksD  224 (301)
T d1lufa_         148 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD  224 (301)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHhhhcc---cCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhh
Confidence            7899999999   7999999999999999999999999999997665443333334446788999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CCcccCCccc
Q 043407           82 VFSFGVLLLVLLTGQ-KLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~-~p~~~~~~~~  106 (110)
                      +||||+++||+++|. .||.+.+..+
T Consensus       225 VwS~Gvvl~ell~~~~~p~~~~~~~e  250 (301)
T d1lufa_         225 VWAYGVVLWEIFSYGLQPYYGMAHEE  250 (301)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             hccchhhHHHHHccCCCCCCCCCHHH
Confidence            999999999999985 6787665443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=5.2e-30  Score=158.77  Aligned_cols=101  Identities=15%  Similarity=0.265  Sum_probs=84.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-----CCceEEecccccccCCCCCc-----ceeccccccccccccccee
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESIPDGET-----HIKDAIPIGIMGFVATEYV   71 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-----~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~   71 (110)
                      |++.|++|||   +.+++||||||.||+++.     ++.++++|||+++.......     ........||+.|+|||.+
T Consensus       109 q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~  185 (293)
T d1csna_         109 QMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH  185 (293)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHh
Confidence            7889999999   899999999999999974     56799999999986543211     1122334699999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           72 TTGDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        72 ~~~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      .+..++.++|+||+|+++||+++|..||.+.+..
T Consensus       186 ~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~  219 (293)
T d1csna_         186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA  219 (293)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSC
T ss_pred             cCCCCChHHHHHHhhHHHHHHHhCCCcCCCccch
Confidence            9999999999999999999999999999876543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.7e-31  Score=161.69  Aligned_cols=101  Identities=26%  Similarity=0.405  Sum_probs=76.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.||.|||   +.+++||||||.||+++.++.+|++|||+++........ ......+++.|+|||.+....++.++|
T Consensus       116 qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~-~~~~~~gt~~y~apE~l~~~~~~~~~D  191 (273)
T d1mp8a_         116 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPIKWMAPESINFRRFTSASD  191 (273)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCCcce-eccceecCcccchhhHhccCCCCCccc
Confidence            7899999999   899999999999999999999999999998765432222 222335788999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      +||||+++||+++ |..||.+.+..+
T Consensus       192 iwSlGvil~e~lt~g~~P~~~~~~~~  217 (273)
T d1mp8a_         192 VWMFGVCMWEILMHGVKPFQGVKNND  217 (273)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             cccchHHHHHHHhcCCCCCCCCCHHH
Confidence            9999999999997 899998776654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.4e-30  Score=157.19  Aligned_cols=101  Identities=20%  Similarity=0.402  Sum_probs=86.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |+++|++|||   +.+++||||||+||+++.++.+|++|||+++........ ......+++.|+|||.+....++.++|
T Consensus       108 qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~ksD  183 (258)
T d1k2pa_         108 DVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-SSVGSKFPVRWSPPEVLMYSKFSSKSD  183 (258)
T ss_dssp             HHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-CCCCSCCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCce-eecccCCCCCcCCcHHhcCCCCCccee
Confidence            7899999999   789999999999999999999999999998765443222 222235888999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      +||||+++||+++ |+.||.+.+..+
T Consensus       184 iwS~G~~l~el~t~g~~Pf~~~~~~~  209 (258)
T d1k2pa_         184 IWAFGVLMWEIYSLGKMPYERFTNSE  209 (258)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTSCHHH
T ss_pred             ecccchhhHhHHhcCCCCCCCCCHHH
Confidence            9999999999998 899998776543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.9e-30  Score=158.86  Aligned_cols=99  Identities=29%  Similarity=0.435  Sum_probs=84.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC----ceEEecccccccCCCCCcceecccccccccccccceeccCCCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~   77 (110)
                      |++.|++|||   +.+++||||||+||+++.++    .+|++|||++.........   ....+++.|+|||++.+..++
T Consensus       121 qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~---~~~~~t~~y~APE~~~~~~~~  194 (293)
T d1jksa_         121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNYEPLG  194 (293)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBC---SCCCCCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccc---cccCCCCcccCHHHHcCCCCC
Confidence            7899999999   89999999999999998765    4899999998776443222   233688899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           78 EKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        78 ~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      .++|+||+|+++||+++|+.||.+.+..+
T Consensus       195 ~~~DiwSlGvilyell~g~~Pf~~~~~~~  223 (293)
T d1jksa_         195 LEADMWSIGVITYILLSGASPFLGDTKQE  223 (293)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             CcccchhhhHHHHHHHcCCCCCCCCCHHH
Confidence            99999999999999999999998776543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-30  Score=158.87  Aligned_cols=94  Identities=23%  Similarity=0.342  Sum_probs=79.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC-CCceEEecccccccCCCCCcceecccccccccccccceeccCCC-Cch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~   79 (110)
                      |++.|++|||   +.+++||||||+||+++. .+.++++|||++........    ....||+.|+|||++.+..+ +.+
T Consensus       118 qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~----~~~~GT~~y~aPE~~~~~~~~~~~  190 (273)
T d1xwsa_         118 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRS  190 (273)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccceecccccc----cccccCCCcCCHHHHcCCCCCCcc
Confidence            7899999999   899999999999999985 47899999999976543221    22368999999999987765 567


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +|+||+||++|++++|+.||.+.
T Consensus       191 ~DiwSlGvilyell~g~~Pf~~~  213 (273)
T d1xwsa_         191 AAVWSLGILLYDMVCGDIPFEHD  213 (273)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             cccccceeeehhHhhCCCCCCCc
Confidence            89999999999999999999764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=6.6e-30  Score=158.53  Aligned_cols=102  Identities=18%  Similarity=0.319  Sum_probs=83.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECC---CCceEEecccccccCCCCCcc-----eecccccccccccccceecc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTT   73 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~---~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~   73 (110)
                      |++.||+|||   +.+++||||||+||++..   +..++++|||+++........     .......|++.|+|||.+.+
T Consensus       111 qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         111 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             HHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhC
Confidence            7899999999   799999999999999864   457999999999865432221     12233468999999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           74 GDYNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        74 ~~~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      ..++.++|+||||+++||+++|..||.+....+
T Consensus       188 ~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~  220 (299)
T d1ckia_         188 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT  220 (299)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC---
T ss_pred             CCCCChhhEEecCHHHHHHHhCCCcccccchHH
Confidence            899999999999999999999999998765543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5e-30  Score=159.24  Aligned_cols=101  Identities=28%  Similarity=0.404  Sum_probs=87.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|++|||   +.+++||||||+||+++.++.+|++|||+++...............+++.|+|||.+....++.++|
T Consensus       143 qi~~al~ylH---~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~D  219 (299)
T d1fgka_         143 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  219 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHhh---hCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999987665443333334446888999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++||+++ |..||.+.+..
T Consensus       220 iwS~Gvvl~ell~~g~~p~~~~~~~  244 (299)
T d1fgka_         220 VWSFGVLLWEIFTLGGSPYPGVPVE  244 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             hHHhHHHHHHhccCCCCCCCCCCHH
Confidence            9999999999998 78999766543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.2e-30  Score=160.70  Aligned_cols=99  Identities=20%  Similarity=0.362  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++........  .....+++.|+|||.+.... .+.++
T Consensus       110 qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~--~~~~~gt~~y~apE~~~~~~~~~~~~  184 (298)
T d1gz8a_         110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV  184 (298)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC--TTCCBCCCTTCCHHHHTTCSSCCTHH
T ss_pred             HHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCCccc--ceeecccceeeehhhhccccCCCccc
Confidence            7899999999   899999999999999999999999999999765433222  22336889999999887665 47889


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      |+||+|+++|++++|+.||.+.+..
T Consensus       185 DiwSlGvily~m~~G~~Pf~~~~~~  209 (298)
T d1gz8a_         185 DIWSLGCIFAEMVTRRALFPGDSEI  209 (298)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cccccchhhhHHhhCCCCCCCCCHH
Confidence            9999999999999999999876543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-30  Score=158.66  Aligned_cols=102  Identities=21%  Similarity=0.421  Sum_probs=84.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCccee-cccccccccccccceeccCCCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~   80 (110)
                      |++.||.|||   +.+++||||||.||+++.++.+|++|||+++.......... .....++..|+|||.+....++.++
T Consensus       119 qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  195 (273)
T d1u46a_         119 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS  195 (273)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcch
Confidence            7899999999   78999999999999999999999999999987654433322 2233467789999999998899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           81 DVFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        81 d~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      |+||||+++||+++ |..||.+.+..+
T Consensus       196 Di~S~Gvil~emlt~G~~Pf~~~~~~~  222 (273)
T d1u46a_         196 DTWMFGVTLWEMFTYGQEPWIGLNGSQ  222 (273)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             hhhhhHHHHHHHHhCCCCCCCCcCHHH
Confidence            99999999999998 899998765543

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-29  Score=159.35  Aligned_cols=101  Identities=21%  Similarity=0.340  Sum_probs=83.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc-eecccccccccccccceecc-CCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTT-GDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~-~~~~~~   79 (110)
                      |++.||+|||   +.+++||||||+||+++.++.+|++|||++......... .......+++.|+|||.+.. ..++.+
T Consensus       117 qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~  193 (345)
T d1pmea_         117 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS  193 (345)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTH
T ss_pred             HHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCch
Confidence            7899999999   899999999999999999999999999998765432211 11233468889999999854 456889


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+|++++++++|..||.+.+..
T Consensus       194 ~DiwSlG~il~eml~g~~pf~~~~~~  219 (345)
T d1pmea_         194 IDIWSVGCILAEMLSNRPIFPGKHYL  219 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             hhhhccCceehHHhhCCCCCCCCCHH
Confidence            99999999999999999999876643

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.1e-29  Score=156.54  Aligned_cols=100  Identities=21%  Similarity=0.354  Sum_probs=83.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcc--eecccccccccccccceeccC-CCCc
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTG-DYNE   78 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~-~~~~   78 (110)
                      |++.|+.|||   +.+++||||||+||+++.++.++++|||++.........  .......+|+.|+|||.+... .++.
T Consensus       125 qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~  201 (318)
T d3blha1         125 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP  201 (318)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCT
T ss_pred             HHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCc
Confidence            7899999999   899999999999999999999999999999765432211  112223589999999998765 5789


Q ss_pred             hhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           79 KCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        79 ~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++|+||+|++++|+++|+.||.+.+.
T Consensus       202 k~DiwSlGvil~el~~g~~pf~~~~~  227 (318)
T d3blha1         202 PIDLWGAGCIMAEMWTRSPIMQGNTE  227 (318)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHHcccCCceeeeHhhCCCCCCCCCH
Confidence            99999999999999999999987654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-29  Score=155.81  Aligned_cols=98  Identities=32%  Similarity=0.398  Sum_probs=76.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|++|||   +.+++||||||+||+++.++.+||+|||+++......... .....+++.|+|||.+....++.++|
T Consensus       121 ~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~ksD  196 (285)
T d1fmka3         121 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSD  196 (285)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCcee-eccccccccccChHHHhCCCCCcHHh
Confidence            7899999999   7899999999999999999999999999997654332222 12235788999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CCcccCC
Q 043407           82 VFSFGVLLLVLLTGQ-KLYSIDE  103 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~-~p~~~~~  103 (110)
                      +||||+++||+++|. +|+.+..
T Consensus       197 I~S~Giil~el~t~~~p~~~~~~  219 (285)
T d1fmka3         197 VWSFGILLTELTTKGRVPYPGMV  219 (285)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             hhcchHHHHHHHhCCCCCCCCCC
Confidence            999999999999965 4454443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.95  E-value=5.5e-29  Score=153.16  Aligned_cols=99  Identities=26%  Similarity=0.420  Sum_probs=83.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceecc------CC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT------GD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~------~~   75 (110)
                      ||++|++|||   +.+++||||||+||+++.++.+|++|||+++........   ....|++.|++||.+..      ..
T Consensus       118 qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~~PE~~~~~~~~~~~~  191 (277)
T d1phka_         118 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPEIIECSMNDNHPG  191 (277)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB---CCCCSCGGGCCHHHHHHHHCTTSCC
T ss_pred             HHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchheeEccCCCce---eeeeccCCCCCHHHhhccccccCCC
Confidence            7999999999   899999999999999999999999999999876543221   22368899999998853      34


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCccc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEAGD  106 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~~~  106 (110)
                      ++.++|+||+|+++++|++|+.||.+.+..+
T Consensus       192 ~~~~~DiwslGvilyeml~g~~Pf~~~~~~~  222 (277)
T d1phka_         192 YGKEVDMWSTGVIMYTLLAGSPPFWHRKQML  222 (277)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             CCchheEcccchhhhhhccCCCCCCCCCHHH
Confidence            6789999999999999999999998876543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.1e-29  Score=156.80  Aligned_cols=98  Identities=34%  Similarity=0.486  Sum_probs=82.6

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcceecccccccccccccceeccC-CCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~   79 (110)
                      |++.||+|||   +.+|+||||||+||+++.++ .+|++|||++.........   ....|++.|++||.+... .++.+
T Consensus       130 qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~  203 (350)
T d1q5ka_         130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN---VSYICSRYYRAPELIFGATDYTSS  203 (350)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCC---CSCCSCTTSCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhccCCccc---ccccccccccChHHhhcccCCCcc
Confidence            7899999999   89999999999999999775 8899999998766443222   223688899999987654 58999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+||++||+++|+.||...+..
T Consensus       204 ~DIwSlG~il~el~~g~~pf~~~~~~  229 (350)
T d1q5ka_         204 IDVWSAGCVLAELLLGQPIFPGDSGV  229 (350)
T ss_dssp             HHHHHHHHHHHHHHHTSCSSCCSSHH
T ss_pred             eeecccceEEEehhhCCCCCCCCCHH
Confidence            99999999999999999999876543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.8e-29  Score=155.98  Aligned_cols=101  Identities=22%  Similarity=0.409  Sum_probs=87.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|++|||   +.+++||||||.||+++.++.++++|||+++...............+++.|+|||.+....++.++|
T Consensus       153 qi~~gl~~LH---~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  229 (311)
T d1t46a_         153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (311)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCccc
Confidence            7899999999   7899999999999999999999999999998766554444444557889999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCcc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~  105 (110)
                      +||||+++|||++ |..||.+.+..
T Consensus       230 IwS~G~~l~ellt~g~p~~~~~~~~  254 (311)
T d1t46a_         230 VWSYGIFLWELFSLGSSPYPGMPVD  254 (311)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred             ccchHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999998 66777665543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.2e-29  Score=155.38  Aligned_cols=102  Identities=33%  Similarity=0.509  Sum_probs=85.0

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC--CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~   79 (110)
                      |++.|++|+|   +.+++||||||+||+++.++.++++|||+++......... .....+++.|++||.+....  ++.+
T Consensus       137 Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~-~~~~~g~~~~~~pe~~~~~~~~~~~k  212 (322)
T d1vzoa_         137 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKA  212 (322)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGG-GCGGGSCCTTCCHHHHTTCC---CTH
T ss_pred             HHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhhccccccc-ccccccccccchhHHhhcCCcCCCch
Confidence            7899999999   7999999999999999999999999999987665433322 22346888999999987654  6788


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcccc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAGDR  107 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~~~  107 (110)
                      +|+||+||++|+|++|..||.+.+..+.
T Consensus       213 sDIWSlG~iLyelltG~~PF~~~~~~~~  240 (322)
T d1vzoa_         213 VDWWSLGVLMYELLTGASPFTVDGEKNS  240 (322)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSCTTSCCC
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999999999999999988765543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.7e-29  Score=155.84  Aligned_cols=101  Identities=25%  Similarity=0.380  Sum_probs=86.4

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.||.|||   +.+++||||||.||+++.++.+||+|||+++...............+++.|++||.+....++.++|
T Consensus       141 ~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~D  217 (308)
T d1p4oa_         141 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  217 (308)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccc
Confidence            7899999999   7899999999999999999999999999998665444444444446889999999999999999999


Q ss_pred             HHHHHHHHHHHHhC-CCCcccCCcc
Q 043407           82 VFSFGVLLLVLLTG-QKLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g-~~p~~~~~~~  105 (110)
                      +||||+++||+++| ..||.+.+..
T Consensus       218 v~S~G~il~El~t~~~~p~~~~~~~  242 (308)
T d1p4oa_         218 VWSFGVVLWEIATLAEQPYQGLSNE  242 (308)
T ss_dssp             HHHHHHHHHHHHHTSCCTTTTSCHH
T ss_pred             cccHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999997 4788766543

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7e-29  Score=154.30  Aligned_cols=103  Identities=19%  Similarity=0.292  Sum_probs=80.5

Q ss_pred             cHHHHHHHHhcC-----CCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccC
Q 043407            2 EIANALAYLHVG-----FPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (110)
Q Consensus         2 qi~~~l~~lh~~-----~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~   74 (110)
                      |++.|+.|+|+.     .+++++||||||.||+++.++.+|++|||+++.........  ......|++.|+|||++...
T Consensus       108 ~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (303)
T d1vjya_         108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  187 (303)
T ss_dssp             HHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhcccc
Confidence            789999999942     12699999999999999999999999999998664432221  22234689999999998654


Q ss_pred             C------CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           75 D------YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        75 ~------~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      .      ++.++|+||||+++||+++|..||...+.
T Consensus       188 ~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~  223 (303)
T d1vjya_         188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED  223 (303)
T ss_dssp             SCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCC
T ss_pred             ccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccc
Confidence            3      45789999999999999999988765443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=3e-29  Score=154.76  Aligned_cols=98  Identities=20%  Similarity=0.385  Sum_probs=80.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.||+|||   +.+|+||||||+||+++.++.++++|||.+.........  .....+++.|++||.+... .++.++
T Consensus       108 qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~~  182 (286)
T d1ob3a_         108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTI  182 (286)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHH
T ss_pred             HHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCccc--cceecccchhhhHHHHhCCCCCCcce
Confidence            7899999999   799999999999999999999999999998765433222  1222578889999998754 468999


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|++++|+++|+.||.+.+.
T Consensus       183 DiwslGv~l~el~~G~~pf~~~~~  206 (286)
T d1ob3a_         183 DIWSVGCIFAEMVNGTPLFPGVSE  206 (286)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             eehhcCcHHHHHHHCCCCCCCCCH
Confidence            999999999999999999986653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.3e-29  Score=155.57  Aligned_cols=98  Identities=21%  Similarity=0.389  Sum_probs=83.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCC--CceEEecccccccCCCCCcceecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      ||+.|++|||   +.+++||||||.||+++.+  ..++++|||++........   .....+++.|++||...+..++.+
T Consensus       110 qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~---~~~~~~t~~y~ape~~~~~~~~~~  183 (321)
T d1tkia_         110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN---FRLLFTAPEYYAPEVHQHDVVSTA  183 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE---EEEEESCGGGSCHHHHTTCEECHH
T ss_pred             HHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccCCc---ccccccccccccchhccCCCCCch
Confidence            7899999999   8999999999999999854  5789999999876543322   223368889999999988889999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcc
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDEAG  105 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~~~  105 (110)
                      +|+||+||++|+|++|..||.+.+..
T Consensus       184 ~DiWSlGvily~ll~G~~Pf~~~~~~  209 (321)
T d1tkia_         184 TDMWSLGTLVYVLLSGINPFLAETNQ  209 (321)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             hhcccHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999999887654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-28  Score=154.45  Aligned_cols=95  Identities=23%  Similarity=0.426  Sum_probs=82.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccC-CCCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~-~~~~~~   80 (110)
                      |++.||+|||   +.+++||||||.||+++.++.++++|||+++.......     ...+++.|+|||.+.+. .++.++
T Consensus       129 qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  200 (346)
T d1cm8a_         129 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT-----GYVVTRWYRAPEVILNWMRYTQTV  200 (346)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC-----SSCSCGGGCCTHHHHTTTCCCTTH
T ss_pred             HHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceeccCCccc-----cccccccccCHHHHcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999976543322     23688899999998764 468899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+||+++++++|..||.+.+.
T Consensus       201 DiwSlGvil~ell~g~~pf~~~~~  224 (346)
T d1cm8a_         201 DIWSVGCIMAEMITGKTLFKGSDH  224 (346)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             hhhcchHHHHHHHHCcCCCCCCCh
Confidence            999999999999999999987654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-28  Score=150.10  Aligned_cols=97  Identities=27%  Similarity=0.457  Sum_probs=78.5

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|+.|||   +.+++||||||+||+++.++.++++|||+++.......     ...++..|+|||.+....++.++|
T Consensus       111 ~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~-----~~~~~~~y~aPE~l~~~~~t~~sD  182 (262)
T d1byga_         111 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  182 (262)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCCc-----cccccccCCChHHHhCCCCChHHH
Confidence            7899999999   78999999999999999999999999999876543222     224677899999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCCcccCCccc
Q 043407           82 VFSFGVLLLVLLT-GQKLYSIDEAGD  106 (110)
Q Consensus        82 ~~s~g~~~~~~~~-g~~p~~~~~~~~  106 (110)
                      +||||+++||+++ |+.||...+..+
T Consensus       183 IwSfG~il~el~t~~~~p~~~~~~~~  208 (262)
T d1byga_         183 VWSFGILLWEIYSFGRVPYPRIPLKD  208 (262)
T ss_dssp             HHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             HHhHHHHHHHHHHCCCCCCCCCCHHH
Confidence            9999999999998 788887765543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.4e-28  Score=151.67  Aligned_cols=98  Identities=28%  Similarity=0.403  Sum_probs=81.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcce--ecccccccccccccceeccCCCCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTGDYNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~   79 (110)
                      |++.||.|+|   +.+++||||||+||+++.++.+|++|||+++.........  ......+++.|++||.+....++.+
T Consensus       138 qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k  214 (311)
T d1r0pa_         138 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK  214 (311)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCCh
Confidence            7899999999   7899999999999999999999999999998654332221  1122357889999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSID  102 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~  102 (110)
                      +|+||||+++||+++|..||...
T Consensus       215 sDI~SfGivl~El~t~~~p~~~~  237 (311)
T d1r0pa_         215 SDVWSFGVLLWELMTRGAPPYPD  237 (311)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSCC-
T ss_pred             hHhhhhHHHHHHHHHCCCCCCCC
Confidence            99999999999999977776543

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.1e-28  Score=151.15  Aligned_cols=98  Identities=23%  Similarity=0.367  Sum_probs=81.2

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      ||+.|+.|+|   +.+++||||||.||+++.++.+|++|||+++........   ....++..|++||.+....++.++|
T Consensus       135 qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~l~~~~~~~~sD  208 (309)
T d1fvra_         135 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK---TMGRLPVRWMAIESLNYSVYTTNSD  208 (309)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC-------CCTTTCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHhhh---cCCccccccccceEEEcCCCceEEccccccccccccccc---cceecCCcccchHHhccCCCCccce
Confidence            7899999999   799999999999999999999999999998754322211   2235788999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CCcccCCcc
Q 043407           82 VFSFGVLLLVLLTGQ-KLYSIDEAG  105 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~-~p~~~~~~~  105 (110)
                      +||||+++||+++|. .||.+.+..
T Consensus       209 vwSfGvil~ell~~~~~p~~~~~~~  233 (309)
T d1fvra_         209 VWSYGVLLWEIVSLGGTPYCGMTCA  233 (309)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             eehhHHHHHHHHhcCCCCCCCCCHH
Confidence            999999999999965 678766543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.94  E-value=8.1e-27  Score=146.11  Aligned_cols=96  Identities=24%  Similarity=0.430  Sum_probs=80.3

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC-ceEEecccccccCCCCCcceecccccccccccccceeccCC-CCch
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~   79 (110)
                      ||+.||.|||   +++|+||||||+||+++.++ .++++|||++.........   ....+++.|+|||.+.... ++.+
T Consensus       137 qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~  210 (328)
T d3bqca1         137 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGPELLVDYQMYDYS  210 (328)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCC---CSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCCcc---cccccCccccCcccccCCCCCCcc
Confidence            7899999999   89999999999999998655 5899999998765433221   2335788999999987654 6899


Q ss_pred             hhHHHHHHHHHHHHhCCCCcccCC
Q 043407           80 CDVFSFGVLLLVLLTGQKLYSIDE  103 (110)
Q Consensus        80 ~d~~s~g~~~~~~~~g~~p~~~~~  103 (110)
                      +|+||+|++++++++|..||...+
T Consensus       211 ~DiwslG~~l~e~~~g~~pf~~~~  234 (328)
T d3bqca1         211 LDMWSLGCMLASMIFRKEPFFHGH  234 (328)
T ss_dssp             HHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cchhhhhhhhHHhccCCCCCCCCc
Confidence            999999999999999999996543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1e-26  Score=143.45  Aligned_cols=94  Identities=16%  Similarity=0.304  Sum_probs=78.8

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      |++.||+|||   +.+|+||||||+||+++.++.++++|||.++..........  ...+++.|.+||.+.... ++.++
T Consensus       109 q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~  183 (292)
T d1unla_         109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS--AEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC--SCCSCGGGCCHHHHTTCSCCCTHH
T ss_pred             HHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCCccce--eeccccchhhhhHhccCCCCCchh
Confidence            7899999999   79999999999999999999999999999987654332221  224667789999887665 68999


Q ss_pred             hHHHHHHHHHHHHhCCCCcc
Q 043407           81 DVFSFGVLLLVLLTGQKLYS  100 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~  100 (110)
                      |+||+||+++|+++|..||.
T Consensus       184 DiwSlG~il~ell~g~~p~~  203 (292)
T d1unla_         184 DMWSAGCIFAELANAGRPLF  203 (292)
T ss_dssp             HHHHHHHHHHHHTTTSCCSC
T ss_pred             hccccchHHHHHhhCCCCCC
Confidence            99999999999999998863

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.5e-27  Score=147.99  Aligned_cols=97  Identities=21%  Similarity=0.312  Sum_probs=77.7

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCCCCchhh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~d   81 (110)
                      |++.|+.|||   +.+++||||||.||+++.++.++++|||+++.......   .....+++.|+|||++.+..++.++|
T Consensus       127 qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~---~~~~~~t~~y~aPE~l~~~~~~~~~D  200 (355)
T d2b1pa1         127 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  200 (355)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhccccccc---cccccccccccChhhhcCCCCCCCcc
Confidence            7899999999   79999999999999999999999999998765543221   12235788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCcccCCc
Q 043407           82 VFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        82 ~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      +||+||+++++++|+.||.+.+.
T Consensus       201 iwSlG~~l~ell~g~~pF~~~~~  223 (355)
T d2b1pa1         201 IWSVGCIMGEMVRHKILFPGRDY  223 (355)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cccccchHHHHhhCCCCCCCCCH
Confidence            99999999999999999987653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6e-27  Score=147.61  Aligned_cols=95  Identities=28%  Similarity=0.463  Sum_probs=77.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCCCCCcceecccccccccccccceeccCC-CCchh
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~   80 (110)
                      ||+.||+|||   +++++||||||+||+++.++.++++|||++......     .....|++.|+|||...... ++.++
T Consensus       129 qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~-----~~~~~g~~~y~apE~~~~~~~~~~~~  200 (348)
T d2gfsa1         129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTV  200 (348)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG-----GSSSCHHHHTSCHHHHTTCSCCCTTH
T ss_pred             HHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcccCcc-----cccccccccccCchhhcCCccCCccc
Confidence            7899999999   899999999999999999999999999998654322     12336888999999876654 57899


Q ss_pred             hHHHHHHHHHHHHhCCCCcccCCc
Q 043407           81 DVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        81 d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      |+||+|+++|++++|+.||.+.+.
T Consensus       201 DiwSlGv~l~~ll~g~~pF~~~~~  224 (348)
T d2gfsa1         201 DIWSVGCIMAELLTGRTLFPGTDH  224 (348)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             chhhhhHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999987653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=4e-26  Score=144.30  Aligned_cols=96  Identities=22%  Similarity=0.305  Sum_probs=78.1

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCC------ceEEecccccccCCCCCcceecccccccccccccceeccCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH------VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD   75 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~   75 (110)
                      |++.|+.|||+  ..+|+||||||.||+++.++      .++++|||.+.......     ....+++.|+|||++....
T Consensus       133 qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~  205 (362)
T d1q8ya_         133 QLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAP  205 (362)
T ss_dssp             HHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCC
T ss_pred             HHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccceeeEeeccccccccccc-----ccccccccccChhhccccC
Confidence            78999999994  37899999999999997654      38999999987554322     2236888999999999989


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCCcccCCc
Q 043407           76 YNEKCDVFSFGVLLLVLLTGQKLYSIDEA  104 (110)
Q Consensus        76 ~~~~~d~~s~g~~~~~~~~g~~p~~~~~~  104 (110)
                      ++.++|+||+|++++++++|+.||...+.
T Consensus       206 ~~~~~DiwSlG~il~el~~g~~pF~~~~~  234 (362)
T d1q8ya_         206 WGCGADIWSTACLIFELITGDFLFEPDEG  234 (362)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             CCccccccchHHHHHHHHHCCCCCCCCcc
Confidence            99999999999999999999999986644

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.38  E-value=1.5e-13  Score=79.61  Aligned_cols=43  Identities=21%  Similarity=0.280  Sum_probs=37.9

Q ss_pred             cHHHHHHHHhcCCCCCeEEcCCCCCceEECCCCceEEecccccccCC
Q 043407            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (110)
Q Consensus         2 qi~~~l~~lh~~~~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~   48 (110)
                      |++.++++||   +.+++||||||.||+++.+ .++++|||.+....
T Consensus       111 ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2         111 MILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             HHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEECCCcccCC
Confidence            6889999999   7999999999999999865 48899999886654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.93  E-value=0.00011  Score=44.47  Aligned_cols=32  Identities=22%  Similarity=0.458  Sum_probs=28.1

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEeccccccc
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~   46 (110)
                      ..++||+|+.++|++++.+....++||+.+..
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccccccCCcchhhhhcccccceeEeccccccc
Confidence            46899999999999999888789999998753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.22  E-value=0.0011  Score=38.71  Aligned_cols=30  Identities=13%  Similarity=0.217  Sum_probs=25.3

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..++|+|+.+.|++++.++.+.++||+.+.
T Consensus       183 ~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cEEEEeeccCcceeecCCceEEEeechhcc
Confidence            358999999999999877767899998654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.08  E-value=0.0011  Score=38.50  Aligned_cols=30  Identities=10%  Similarity=0.182  Sum_probs=25.4

Q ss_pred             CCeEEcCCCCCceEECCCCceEEecccccc
Q 043407           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (110)
Q Consensus        16 ~~~~h~dl~~~nil~~~~~~~~l~dfg~~~   45 (110)
                      ..++|+|+.+.||+++.+..+.++||+.+.
T Consensus       175 ~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         175 LVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            358999999999999887667899998654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.56  E-value=0.0037  Score=39.03  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=26.3

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ...++|+|+.+.||+++.+. ++++|+..+...
T Consensus       222 ~~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~G  253 (392)
T d2pula1         222 AETLIHGDLHTGSIFASEHE-TKVIDPEFAFYG  253 (392)
T ss_dssp             CCEEECSCCCGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CcceeccCCcCCceeEcCCc-eEEechhhcccC
Confidence            35799999999999998654 899999876543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=94.61  E-value=0.0082  Score=36.34  Aligned_cols=31  Identities=13%  Similarity=0.145  Sum_probs=24.7

Q ss_pred             CCCeEEcCCCCCceEECCCCceEEecccccccC
Q 043407           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (110)
Q Consensus        15 ~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~   47 (110)
                      ..++||+|+.+.|++++.+  ..++||+.+...
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~g  221 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDARNG  221 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTCCEE
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhcccC
Confidence            4578999999999999743  458999887653

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.52  E-value=0.063  Score=33.20  Aligned_cols=29  Identities=24%  Similarity=0.395  Sum_probs=21.8

Q ss_pred             CeEEcCCCCCceEEC----------------------------CCCceEEecccccc
Q 043407           17 PIVFKNIKLSSILFD----------------------------EDHVAKLFDFSLAE   45 (110)
Q Consensus        17 ~~~h~dl~~~nil~~----------------------------~~~~~~l~dfg~~~   45 (110)
                      .++|.|+.+.||++.                            .++.++++||..+.
T Consensus       219 v~CHnDL~~~NiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lID~EYa~  275 (395)
T d1nw1a_         219 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYAS  275 (395)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCE
T ss_pred             eEEecCCCcccEeeccccccccccccccccccccccccccccCCCCcEEEEeecccC
Confidence            457999999999983                            34678999998764