BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043412
MAPFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL
YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK
RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG
LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK
IVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLT
EENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQ
RFSPETVAGIVTDHIKDILSSKI

High Scoring Gene Products

Symbol, full name Information P value
AT3G10630 protein from Arabidopsis thaliana 8.4e-113
AT5G59070 protein from Arabidopsis thaliana 1.8e-05
HNE_0792
Putative glycosyl transferase
protein from Hyphomonas neptunium ATCC 15444 2.6e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043412
        (383 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2075820 - symbol:AT3G10630 "AT3G10630" species...  1113  8.4e-113  1
TAIR|locus:2153281 - symbol:AT5G59070 species:3702 "Arabi...   131  1.8e-05   1
UNIPROTKB|Q0C423 - symbol:HNE_0792 "Putative glycosyl tra...   128  2.6e-05   1


>TAIR|locus:2075820 [details] [associations]
            symbol:AT3G10630 "AT3G10630" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0009058
            "biosynthetic process" evidence=IEA] [GO:0016757 "transferase
            activity, transferring glycosyl groups" evidence=ISS] [GO:0001666
            "response to hypoxia" evidence=RCA] [GO:0019375 "galactolipid
            biosynthetic process" evidence=RCA] InterPro:IPR001296 Pfam:PF00534
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009058 GO:GO:0016757
            EMBL:AC013428 eggNOG:COG0438 CAZy:GT4 UniGene:At.19953
            UniGene:At.69665 EMBL:AY099710 EMBL:AY085762 EMBL:BT000324
            IPI:IPI00521779 RefSeq:NP_566378.1 ProteinModelPortal:Q9LPN6
            PaxDb:Q9LPN6 PRIDE:Q9LPN6 EnsemblPlants:AT3G10630.1 GeneID:820232
            KEGG:ath:AT3G10630 TAIR:At3g10630 HOGENOM:HOG000029555
            InParanoid:Q9LPN6 OMA:TMFETDR PhylomeDB:Q9LPN6
            ProtClustDB:CLSN2688246 ArrayExpress:Q9LPN6 Genevestigator:Q9LPN6
            Uniprot:Q9LPN6
        Length = 487

 Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
 Identities = 220/399 (55%), Positives = 272/399 (68%)

Query:     1 MAPFLXXXXXXXXXXXXILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVEL 60
             MAPFL            +L+L  H+ NPRF++ IEHHGDL+S++FW GL    + +A+E+
Sbjct:    90 MAPFLSSGGYSSEAWSYVLSLRNHLTNPRFRITIEHHGDLESVEFWNGLAKETKEVAIEM 149

Query:    61 YNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVK 120
             Y  +CR NET+V+CHSEPGAWYPPLF+TLPCPPT GY DF++VIGRTMFETDRV+PEHVK
Sbjct:   150 YREQCRPNETIVVCHSEPGAWYPPLFETLPCPPT-GYEDFLSVIGRTMFETDRVNPEHVK 208

Query:   121 RCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLG 180
             RCN+MD VWVPTDFHVS+F++SGVD +KVVKIVQPV VGFFDP    P+DL ++G  VLG
Sbjct:   209 RCNQMDHVWVPTDFHVSSFVQSGVDSSKVVKIVQPVDVGFFDPSKYKPLDLMAVGDLVLG 268

Query:   181 LSNMN----------TSSKEF-----VFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY 225
                 N             K +      +LS F  E      +L  AY  +    + ++ +
Sbjct:   269 SGMKNGFVFLSVFKWEQRKGWDVLLKAYLSEFSGEDNVALFLLTNAYHSDSDFGNKILDF 328

Query:   226 LLTNPYHSGRDFGNKIVNFVEDSDLEKPD-DGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284
             +        R+ G   V +V D  + + D      AAD FVLP+RGEGWGRP+VEAM+M 
Sbjct:   329 VEEMNIEEPRN-GYPFV-YVIDKHIAQVDLPRLYKAADAFVLPTRGEGWGRPIVEAMAMS 386

Query:   285 LPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344
             LPVI TNWSGPTEYLTE NGYPL+V  MSEV EGPF+GH WAEPSVDKLR LMR V+SN 
Sbjct:   387 LPVITTNWSGPTEYLTERNGYPLVVEEMSEVKEGPFEGHQWAEPSVDKLRVLMRRVMSNP 446

Query:   345 DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSKI 383
             DEAK KGK+ R+DM++ F+PE VA +V D I  I   KI
Sbjct:   447 DEAKVKGKRGRDDMVKNFAPEVVAKVVADQIARIFDEKI 485


>TAIR|locus:2153281 [details] [associations]
            symbol:AT5G59070 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0009058
            "biosynthetic process" evidence=IEA;ISS] [GO:0016757 "transferase
            activity, transferring glycosyl groups" evidence=ISS] [GO:0001666
            "response to hypoxia" evidence=RCA] [GO:0019375 "galactolipid
            biosynthetic process" evidence=RCA] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001296
            Pfam:PF00534 GO:GO:0005794 EMBL:CP002688 GO:GO:0009058
            GO:GO:0005768 GO:GO:0016740 GO:GO:0005802 IPI:IPI00547313
            RefSeq:NP_200715.2 UniGene:At.29247 ProteinModelPortal:F4KHR9
            PRIDE:F4KHR9 EnsemblPlants:AT5G59070.1 GeneID:836024
            KEGG:ath:AT5G59070 OMA:YMIPEER Uniprot:F4KHR9
        Length = 505

 Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 53/165 (32%), Positives = 81/165 (49%)

Query:   209 LKAYLEEFSKA--DGVVLYLLTNPYHSG-RDFGNKIVNFVEDSDLEKPDDGWAPAADVFV 265
             LK   EE  +A  + VVL     P+ +  +D G+  V  +   D EK   G+  A DVFV
Sbjct:   339 LKRVFEENKEARENVVVLVAGDGPWGNRYKDLGSTNVIVLGPLDQEKLA-GFYNAIDVFV 397

Query:   266 LPS-RGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHF 324
              P+ R +G    L+EAM  G PV+AT  +  T                  V  GP  G+ 
Sbjct:   398 NPTLRAQGLDHTLLEAMVSGKPVLATRLASIT----------------GSVVVGPHLGYT 441

Query:   325 WAEPSVDKL-RALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVA 368
             ++ P+V+ L  A++R+V    +E + KGK+ARE  ++ F+   +A
Sbjct:   442 FS-PNVESLTEAILRVVSDGTEELQRKGKEARERSLRLFTATKMA 485


>UNIPROTKB|Q0C423 [details] [associations]
            symbol:HNE_0792 "Putative glycosyl transferase"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0000271
            "polysaccharide biosynthetic process" evidence=ISS] [GO:0016757
            "transferase activity, transferring glycosyl groups" evidence=ISS]
            InterPro:IPR001296 Pfam:PF00534 GO:GO:0016757 eggNOG:COG0438
            CAZy:GT4 EMBL:CP000158 GenomeReviews:CP000158_GR GO:GO:0000271
            RefSeq:YP_759520.1 ProteinModelPortal:Q0C423 STRING:Q0C423
            GeneID:4289646 KEGG:hne:HNE_0792 PATRIC:32214390 OMA:VIVVPHP
            BioCyc:HNEP228405:GI69-834-MONOMER Uniprot:Q0C423
        Length = 394

 Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 33/102 (32%), Positives = 50/102 (49%)

Query:   262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTE--GP 319
             D+ +   R EG+G P+ EAM+MG  VIAT WSG  +++ E    P+    + EV +    
Sbjct:   276 DILLSLHRAEGFGLPIAEAMAMGKVVIATGWSGNMDFMDETCSVPVPY-ELVEVADKYNV 334

Query:   320 FKGH---FWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM 358
             + GH    WA+P V    A +  +  +       G+ AR  M
Sbjct:   335 YTGHTGAVWADPDVGAAAAALTQIADDPALRLRLGETARSKM 376


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      383       371   0.00086  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  275 KB (2144 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.01u 0.12s 30.13t   Elapsed:  00:00:01
  Total cpu time:  30.01u 0.12s 30.13t   Elapsed:  00:00:01
  Start:  Mon May 20 22:57:21 2013   End:  Mon May 20 22:57:22 2013

Back to top