Query 043412
Match_columns 383
No_of_seqs 236 out of 2271
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 07:49:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043412.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043412hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjm_A Glycosyl transferase, g 100.0 7.5E-40 2.6E-44 304.1 21.2 333 6-381 25-388 (394)
2 3oy2_A Glycosyltransferase B73 100.0 1E-39 3.5E-44 305.1 18.2 347 7-382 13-394 (413)
3 3fro_A GLGA glycogen synthase; 100.0 3.1E-40 1.1E-44 310.8 12.3 236 117-382 181-434 (439)
4 3c48_A Predicted glycosyltrans 100.0 1.3E-38 4.3E-43 300.0 19.0 233 122-382 182-429 (438)
5 3vue_A GBSS-I, granule-bound s 100.0 3.4E-38 1.2E-42 301.5 21.3 245 119-379 236-512 (536)
6 3okp_A GDP-mannose-dependent a 100.0 6.4E-39 2.2E-43 297.6 15.4 335 7-381 18-382 (394)
7 2x6q_A Trehalose-synthase TRET 100.0 7.8E-39 2.7E-43 299.4 15.7 338 2-379 47-415 (416)
8 2r60_A Glycosyl transferase, g 100.0 5.4E-39 1.8E-43 307.5 10.5 237 121-382 187-463 (499)
9 2iw1_A Lipopolysaccharide core 100.0 1.9E-38 6.5E-43 292.5 13.2 337 6-380 12-373 (374)
10 1rzu_A Glycogen synthase 1; gl 100.0 1E-37 3.5E-42 297.6 12.2 230 119-381 201-478 (485)
11 2qzs_A Glycogen synthase; glyc 100.0 9.9E-37 3.4E-41 290.8 16.7 230 119-381 199-479 (485)
12 2gek_A Phosphatidylinositol ma 100.0 8.4E-37 2.9E-41 284.6 14.9 324 7-382 34-387 (406)
13 3s28_A Sucrose synthase 1; gly 100.0 1.4E-35 4.9E-40 292.3 19.6 235 121-378 471-769 (816)
14 2iuy_A Avigt4, glycosyltransfe 100.0 2.9E-35 1E-39 268.0 19.4 291 6-382 28-339 (342)
15 2x0d_A WSAF; GT4 family, trans 100.0 2.8E-33 9.6E-38 260.0 0.6 214 122-381 190-412 (413)
16 2vsy_A XCC0866; transferase, g 100.0 2E-29 7E-34 244.9 16.5 312 2-381 212-562 (568)
17 3nb0_A Glycogen [starch] synth 100.0 2.9E-29 1E-33 237.0 15.4 241 122-381 258-636 (725)
18 1uqt_A Alpha, alpha-trehalose- 100.0 4.4E-29 1.5E-33 234.7 13.3 233 117-378 172-454 (482)
19 2xci_A KDO-transferase, 3-deox 99.9 1.3E-27 4.4E-32 219.4 15.4 289 7-363 49-365 (374)
20 2bfw_A GLGA glycogen synthase; 99.9 3.4E-27 1.2E-31 197.8 14.8 182 152-363 2-200 (200)
21 1f0k_A MURG, UDP-N-acetylgluco 99.9 1.2E-27 4.3E-32 219.4 12.0 300 8-378 17-357 (364)
22 3beo_A UDP-N-acetylglucosamine 99.9 6.5E-29 2.2E-33 228.8 3.1 276 56-376 83-374 (375)
23 1vgv_A UDP-N-acetylglucosamine 99.9 7E-29 2.4E-33 229.4 2.5 284 56-380 74-378 (384)
24 3qhp_A Type 1 capsular polysac 99.9 9.5E-27 3.2E-31 189.1 14.0 155 190-370 2-166 (166)
25 3t5t_A Putative glycosyltransf 99.9 4.4E-26 1.5E-30 211.8 16.5 279 68-378 149-473 (496)
26 2hy7_A Glucuronosyltransferase 99.9 5.4E-28 1.8E-32 224.6 3.1 195 119-378 173-379 (406)
27 1v4v_A UDP-N-acetylglucosamine 99.9 3.7E-25 1.3E-29 203.9 5.4 271 56-380 79-366 (376)
28 2f9f_A First mannosyl transfer 99.9 1.7E-23 5.9E-28 171.5 9.3 140 186-353 19-173 (177)
29 3dzc_A UDP-N-acetylglucosamine 99.8 1.9E-21 6.5E-26 179.5 1.4 280 54-376 97-395 (396)
30 3ot5_A UDP-N-acetylglucosamine 99.8 1.7E-20 5.9E-25 173.4 5.0 279 53-379 99-392 (403)
31 3s2u_A UDP-N-acetylglucosamine 99.8 1.7E-18 5.9E-23 158.1 16.6 307 5-375 7-355 (365)
32 3rhz_A GTF3, nucleotide sugar 99.8 2E-19 6.7E-24 161.4 7.8 192 119-371 128-329 (339)
33 4hwg_A UDP-N-acetylglucosamine 99.6 1E-17 3.4E-22 153.5 -0.4 257 54-355 80-354 (385)
34 3otg_A CALG1; calicheamicin, T 99.6 3.2E-17 1.1E-21 152.5 2.0 165 187-377 240-409 (412)
35 3tsa_A SPNG, NDP-rhamnosyltran 99.5 1.9E-15 6.6E-20 139.5 0.9 161 188-376 217-388 (391)
36 2iyf_A OLED, oleandomycin glyc 99.5 2.4E-14 8.2E-19 133.9 7.8 210 124-378 185-401 (430)
37 4fzr_A SSFS6; structural genom 99.4 1.3E-14 4.4E-19 134.3 -2.0 153 188-372 226-396 (398)
38 3oti_A CALG3; calicheamicin, T 99.4 1.8E-13 6.2E-18 126.6 3.6 158 188-375 231-396 (398)
39 3ia7_A CALG4; glycosysltransfe 99.3 2.2E-12 7.5E-17 119.3 9.1 163 188-377 230-399 (402)
40 3q3e_A HMW1C-like glycosyltran 99.3 4.6E-12 1.6E-16 119.9 9.3 263 57-380 338-625 (631)
41 3rsc_A CALG2; TDP, enediyne, s 99.2 4.4E-11 1.5E-15 111.1 8.2 160 188-377 246-414 (415)
42 2p6p_A Glycosyl transferase; X 99.1 9.4E-10 3.2E-14 101.0 14.2 155 188-375 209-378 (384)
43 2o6l_A UDP-glucuronosyltransfe 99.0 2.2E-10 7.6E-15 92.5 4.8 133 188-351 20-162 (170)
44 2yjn_A ERYCIII, glycosyltransf 99.0 7.1E-10 2.4E-14 103.8 7.8 160 188-376 266-435 (441)
45 2c4m_A Glycogen phosphorylase; 98.9 4.3E-09 1.5E-13 101.8 10.3 238 122-380 400-721 (796)
46 4gyw_A UDP-N-acetylglucosamine 98.9 6.8E-08 2.3E-12 95.4 18.9 176 185-380 518-707 (723)
47 2gj4_A Glycogen phosphorylase, 98.8 4.9E-08 1.7E-12 94.9 14.8 234 122-379 435-755 (824)
48 1l5w_A Maltodextrin phosphoryl 98.8 6.3E-08 2.2E-12 93.8 13.6 235 122-380 411-732 (796)
49 2iya_A OLEI, oleandomycin glyc 98.7 8.4E-08 2.9E-12 89.2 11.3 162 188-376 254-421 (424)
50 1iir_A Glycosyltransferase GTF 98.5 2E-07 6.8E-12 86.4 8.9 156 189-380 238-400 (415)
51 4amg_A Snogd; transferase, pol 98.3 4.1E-07 1.4E-11 83.7 4.1 157 188-374 236-398 (400)
52 3h4t_A Glycosyltransferase GTF 98.3 1.4E-06 4.8E-11 80.4 7.4 156 188-375 220-381 (404)
53 1rrv_A Glycosyltransferase GTF 98.2 4.9E-07 1.7E-11 83.7 3.7 137 189-356 237-382 (416)
54 3l7i_A Teichoic acid biosynthe 97.7 9.9E-05 3.4E-09 73.3 9.2 228 120-377 474-716 (729)
55 2c1x_A UDP-glucose flavonoid 3 97.4 0.00098 3.4E-08 62.2 10.8 143 188-356 270-424 (456)
56 2pq6_A UDP-glucuronosyl/UDP-gl 97.1 0.0026 8.8E-08 59.8 11.0 150 188-356 294-451 (482)
57 3hbf_A Flavonoid 3-O-glucosylt 97.0 0.0048 1.6E-07 57.2 10.7 145 188-356 272-426 (454)
58 1ygp_A Yeast glycogen phosphor 96.9 0.0088 3E-07 58.4 12.6 121 188-309 598-761 (879)
59 3hbm_A UDP-sugar hydrolase; PS 96.7 0.0029 9.8E-08 54.7 6.8 89 190-292 158-252 (282)
60 2acv_A Triterpene UDP-glucosyl 96.4 0.047 1.6E-06 50.9 13.2 139 188-348 275-431 (463)
61 2vch_A Hydroquinone glucosyltr 96.2 0.052 1.8E-06 50.8 12.7 137 188-343 267-429 (480)
62 1psw_A ADP-heptose LPS heptosy 95.0 0.069 2.4E-06 47.5 8.2 94 188-293 179-289 (348)
63 2jzc_A UDP-N-acetylglucosamine 95.0 0.071 2.4E-06 44.1 7.4 41 249-293 120-161 (224)
64 3tov_A Glycosyl transferase fa 93.5 0.19 6.4E-06 44.8 7.5 99 189-299 185-295 (349)
65 2gt1_A Lipopolysaccharide hept 92.3 0.57 1.9E-05 41.1 8.8 134 188-343 177-322 (326)
66 4b4t_W RPN10, 26S proteasome r 77.9 10 0.00034 32.0 8.3 88 190-292 108-195 (268)
67 2l2q_A PTS system, cellobiose- 71.8 13 0.00044 26.4 6.5 67 224-292 8-84 (109)
68 1rcu_A Conserved hypothetical 59.0 8.5 0.00029 30.7 3.7 72 257-340 115-192 (195)
69 3uuw_A Putative oxidoreductase 56.9 18 0.00061 31.0 5.8 70 217-292 27-98 (308)
70 3dfz_A SIRC, precorrin-2 dehyd 56.8 78 0.0027 25.7 12.5 87 207-301 42-132 (223)
71 1tvm_A PTS system, galactitol- 53.7 15 0.00053 26.2 4.1 14 329-342 99-112 (113)
72 3ehd_A Uncharacterized conserv 53.0 36 0.0012 26.2 6.2 37 256-292 65-105 (162)
73 4had_A Probable oxidoreductase 51.3 23 0.0008 30.9 5.8 68 219-292 46-118 (350)
74 2nzw_A Alpha1,3-fucosyltransfe 51.1 32 0.0011 30.5 6.4 60 275-351 249-308 (371)
75 3db2_A Putative NADPH-dependen 48.4 41 0.0014 29.4 6.9 70 217-292 25-98 (354)
76 1zh8_A Oxidoreductase; TM0312, 47.5 82 0.0028 27.3 8.7 67 220-292 43-114 (340)
77 2nte_A BARD-1, BRCA1-associate 47.4 28 0.00097 27.8 5.2 56 236-292 13-68 (210)
78 4h3v_A Oxidoreductase domain p 47.3 42 0.0014 29.6 6.9 67 220-292 36-107 (390)
79 3q2i_A Dehydrogenase; rossmann 46.9 36 0.0012 29.8 6.3 67 220-292 37-107 (354)
80 1h6d_A Precursor form of gluco 46.6 55 0.0019 29.7 7.6 68 218-291 105-181 (433)
81 4fb5_A Probable oxidoreductase 46.3 26 0.0009 31.0 5.4 92 193-292 30-126 (393)
82 3euw_A MYO-inositol dehydrogen 45.8 40 0.0014 29.3 6.4 68 219-292 26-97 (344)
83 3evn_A Oxidoreductase, GFO/IDH 45.4 18 0.00063 31.3 4.1 87 191-292 8-99 (329)
84 1l0b_A BRCA1; TANDEM-BRCT, thr 45.1 27 0.00091 28.4 4.8 67 221-292 7-76 (229)
85 3nvt_A 3-deoxy-D-arabino-heptu 45.0 1.7E+02 0.0057 26.1 11.5 87 204-293 154-258 (385)
86 3mz0_A Inositol 2-dehydrogenas 43.9 47 0.0016 28.9 6.5 69 218-292 24-98 (344)
87 2etx_A Mediator of DNA damage 43.8 34 0.0012 27.4 5.1 62 220-292 11-72 (209)
88 3al2_A DNA topoisomerase 2-bin 43.2 39 0.0013 27.8 5.5 66 221-292 9-75 (235)
89 1fy2_A Aspartyl dipeptidase; s 42.6 12 0.0004 30.8 2.2 86 205-293 17-122 (229)
90 3rc1_A Sugar 3-ketoreductase; 42.5 26 0.00088 30.8 4.6 68 219-292 50-121 (350)
91 2ho3_A Oxidoreductase, GFO/IDH 41.5 51 0.0018 28.3 6.3 67 219-291 23-93 (325)
92 3ezy_A Dehydrogenase; structur 41.1 46 0.0016 28.9 6.0 69 218-292 23-96 (344)
93 3e9m_A Oxidoreductase, GFO/IDH 41.0 56 0.0019 28.2 6.5 75 208-292 20-99 (330)
94 4gqa_A NAD binding oxidoreduct 40.1 30 0.001 31.1 4.7 79 208-292 41-128 (412)
95 1xv5_A AGT, DNA alpha-glucosyl 39.2 1.1E+02 0.0038 24.4 7.1 159 192-369 199-393 (401)
96 3u3x_A Oxidoreductase; structu 38.5 88 0.003 27.4 7.5 67 220-292 49-120 (361)
97 1e2b_A Enzyme IIB-cellobiose; 38.4 19 0.00066 25.3 2.5 57 224-282 7-71 (106)
98 3moi_A Probable dehydrogenase; 38.0 45 0.0015 29.7 5.5 68 219-292 25-96 (387)
99 1qv9_A F420-dependent methylen 37.9 38 0.0013 27.7 4.3 105 193-310 8-121 (283)
100 3u3z_A Microcephalin; DNA repa 37.9 38 0.0013 27.0 4.5 56 235-292 21-76 (199)
101 3l3e_A DNA topoisomerase 2-bin 37.1 69 0.0023 22.3 5.3 69 219-292 16-84 (107)
102 2cok_A Poly [ADP-ribose] polym 36.7 23 0.00079 25.3 2.7 67 220-291 12-78 (113)
103 2iz6_A Molybdenum cofactor car 36.7 16 0.00054 28.6 1.9 66 256-342 103-173 (176)
104 1xea_A Oxidoreductase, GFO/IDH 36.4 1E+02 0.0036 26.3 7.5 67 218-291 24-94 (323)
105 1t15_A Breast cancer type 1 su 36.0 46 0.0016 26.5 4.8 67 221-292 4-73 (214)
106 4gmf_A Yersiniabactin biosynth 35.7 1.2E+02 0.0041 26.8 7.8 66 221-292 31-102 (372)
107 1zco_A 2-dehydro-3-deoxyphosph 35.5 1.7E+02 0.0059 24.3 8.3 97 193-293 25-139 (262)
108 2z1d_A Hydrogenase expression/ 35.5 34 0.0012 29.9 3.9 83 209-292 128-228 (372)
109 1vs1_A 3-deoxy-7-phosphoheptul 34.3 2.1E+02 0.0071 24.0 8.7 90 201-293 47-154 (276)
110 3sqd_A PAX-interacting protein 34.1 24 0.00083 28.6 2.8 64 221-292 16-79 (219)
111 1vli_A Spore coat polysacchari 33.7 90 0.0031 27.8 6.5 57 236-293 101-167 (385)
112 2vxb_A DNA repair protein RHP9 33.4 1.3E+02 0.0044 24.6 7.2 69 221-292 5-98 (241)
113 3v5n_A Oxidoreductase; structu 32.7 72 0.0025 28.7 6.0 68 219-292 62-142 (417)
114 3cea_A MYO-inositol 2-dehydrog 32.6 1.1E+02 0.0037 26.4 7.0 68 218-291 30-102 (346)
115 3oqb_A Oxidoreductase; structu 32.3 39 0.0013 29.9 4.1 53 239-291 57-114 (383)
116 2d8m_A DNA-repair protein XRCC 32.3 1.2E+02 0.004 22.0 6.1 66 219-292 23-88 (129)
117 1vi6_A 30S ribosomal protein S 32.1 1.3E+02 0.0045 24.1 6.6 82 202-290 50-144 (208)
118 1l7b_A DNA ligase; BRCT, autos 32.1 71 0.0024 21.7 4.5 64 220-291 9-72 (92)
119 3g8r_A Probable spore coat pol 31.5 1.3E+02 0.0043 26.4 7.0 54 239-293 81-144 (350)
120 4hkt_A Inositol 2-dehydrogenas 31.5 71 0.0024 27.5 5.6 68 219-292 25-95 (331)
121 3h05_A Uncharacterized protein 31.3 51 0.0017 25.7 4.1 70 205-286 82-151 (177)
122 1ydw_A AX110P-like protein; st 31.3 76 0.0026 27.8 5.8 67 219-291 28-102 (362)
123 3j20_B 30S ribosomal protein S 31.1 2E+02 0.0068 22.9 7.5 83 201-290 45-140 (202)
124 2glx_A 1,5-anhydro-D-fructose 31.0 97 0.0033 26.6 6.4 66 220-291 23-93 (332)
125 2czc_A Glyceraldehyde-3-phosph 31.0 86 0.0029 27.2 6.0 41 252-292 71-111 (334)
126 3ec7_A Putative dehydrogenase; 30.4 74 0.0025 27.8 5.5 69 218-292 45-119 (357)
127 2nx2_A Hypothetical protein YP 30.3 1E+02 0.0035 24.0 5.7 107 191-301 45-178 (181)
128 3e18_A Oxidoreductase; dehydro 30.0 90 0.0031 27.3 6.0 67 218-291 26-96 (359)
129 3dty_A Oxidoreductase, GFO/IDH 29.5 79 0.0027 28.1 5.7 66 220-291 38-116 (398)
130 1xvl_A Mn transporter, MNTC pr 29.2 2E+02 0.007 24.7 8.0 90 257-359 91-184 (321)
131 3ohs_X Trans-1,2-dihydrobenzen 29.2 97 0.0033 26.7 6.1 66 221-292 28-98 (334)
132 1zym_A Enzyme I; phosphotransf 29.1 1.2E+02 0.0042 25.2 6.3 62 264-336 178-239 (258)
133 3jte_A Response regulator rece 28.8 89 0.003 22.3 5.1 68 260-345 49-125 (143)
134 3h5i_A Response regulator/sens 27.2 1.7E+02 0.0057 20.7 7.5 70 260-342 50-123 (140)
135 3nbm_A PTS system, lactose-spe 27.1 1.3E+02 0.0044 21.1 5.2 53 239-292 24-86 (108)
136 1r5j_A Putative phosphotransac 25.6 66 0.0023 28.0 4.2 88 184-282 202-293 (337)
137 2wqp_A Polysialic acid capsule 25.3 1.1E+02 0.0037 26.8 5.5 56 237-293 92-157 (349)
138 2k6g_A Replication factor C su 25.0 1.8E+02 0.0062 20.4 6.7 63 220-289 34-97 (109)
139 2nwr_A 2-dehydro-3-deoxyphosph 24.6 3.1E+02 0.01 22.9 8.0 92 201-293 12-127 (267)
140 3grc_A Sensor protein, kinase; 24.5 1.9E+02 0.0064 20.4 8.3 66 261-343 51-127 (140)
141 3kht_A Response regulator; PSI 24.4 1.9E+02 0.0065 20.5 6.9 70 260-342 51-127 (144)
142 3oet_A Erythronate-4-phosphate 24.4 2.2E+02 0.0075 25.3 7.4 71 220-295 118-214 (381)
143 3gdo_A Uncharacterized oxidore 24.1 1E+02 0.0035 26.9 5.3 66 217-291 26-96 (358)
144 3bch_A 40S ribosomal protein S 24.1 1.7E+02 0.0059 24.2 6.1 83 202-290 85-180 (253)
145 1o0s_A NAD-ME, NAD-dependent m 24.0 2.2E+02 0.0076 26.9 7.4 33 260-292 398-433 (605)
146 3en0_A Cyanophycinase; serine 24.0 74 0.0025 27.1 4.1 102 190-293 27-154 (291)
147 3iz6_A 40S ribosomal protein S 23.8 1.9E+02 0.0066 24.6 6.4 83 202-290 56-151 (305)
148 3m2t_A Probable dehydrogenase; 23.7 61 0.0021 28.4 3.7 69 218-292 27-100 (359)
149 3e82_A Putative oxidoreductase 23.6 84 0.0029 27.6 4.6 68 218-291 29-98 (364)
150 2q5c_A NTRC family transcripti 23.5 2.5E+02 0.0086 22.0 7.0 99 206-341 81-181 (196)
151 1p9l_A Dihydrodipicolinate red 23.1 1.3E+02 0.0045 24.7 5.4 34 260-293 45-78 (245)
152 3o1l_A Formyltetrahydrofolate 23.0 1.7E+02 0.0058 25.0 6.2 66 11-76 116-189 (302)
153 4fyk_A Deoxyribonucleoside 5'- 22.7 50 0.0017 25.0 2.5 34 256-290 64-100 (152)
154 1gq2_A Malic enzyme; oxidoredu 22.1 2.4E+02 0.0081 26.4 7.2 33 260-292 360-395 (555)
155 3u5c_A 40S ribosomal protein S 21.8 2E+02 0.0068 23.8 6.1 83 202-290 51-146 (252)
156 3kb6_A D-lactate dehydrogenase 21.5 1.5E+02 0.005 25.8 5.6 43 252-294 186-233 (334)
157 3l41_A BRCT-containing protein 21.5 51 0.0017 26.7 2.5 61 221-292 8-68 (220)
158 2pln_A HP1043, response regula 21.4 1.9E+02 0.0064 20.3 5.6 67 261-343 63-133 (137)
159 3l4e_A Uncharacterized peptida 20.9 98 0.0033 24.7 4.1 72 221-293 27-122 (206)
160 2o4c_A Erythronate-4-phosphate 20.7 2.6E+02 0.009 24.7 7.2 69 220-293 115-209 (380)
161 3c1a_A Putative oxidoreductase 20.6 69 0.0023 27.4 3.3 86 191-291 13-100 (315)
162 2ebu_A Replication factor C su 20.5 2.3E+02 0.0079 20.0 6.8 66 220-291 24-89 (112)
163 3tml_A 2-dehydro-3-deoxyphosph 20.4 2.9E+02 0.0098 23.4 7.0 99 191-293 19-140 (288)
164 2ixa_A Alpha-N-acetylgalactosa 20.4 1.9E+02 0.0065 26.1 6.5 71 218-291 41-122 (444)
165 3lua_A Response regulator rece 20.4 1.3E+02 0.0044 21.3 4.5 69 260-345 50-129 (140)
166 2ywr_A Phosphoribosylglycinami 20.4 82 0.0028 25.4 3.5 68 9-76 10-88 (216)
167 1qo0_D AMIR; binding protein, 20.4 2.9E+02 0.0098 21.0 9.4 66 260-344 52-126 (196)
No 1
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=7.5e-40 Score=304.13 Aligned_cols=333 Identities=15% Similarity=0.157 Sum_probs=241.2
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCc--cc-ch-hhcCC----------ChhhhhHHHHHHhhhcCCCccE
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDL--QS-LQ-FWEGL----------PHHMRNLAVELYNTECRTNETV 71 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~--~~-~~-~~~~~----------~~~~~~~~~~l~~~~~~~~pDi 71 (383)
..||.+.++.+++++|.++|+...+ .+...... .. .. .+..+ +.........+.+++++.+||+
T Consensus 25 ~~GG~~~~~~~la~~L~~~G~~V~v--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dv 102 (394)
T 2jjm_A 25 SVGGSGVVGTELGKQLAERGHEIHF--ITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDI 102 (394)
T ss_dssp --CHHHHHHHHHHHHHHHTTCEEEE--ECSSCC----CCCTTEEEECCCCC----CCSCCHHHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEE--EeCCCCCcccccCCceEEEecccccccccccccccHHHHHHHHHHHHHcCCCE
Confidence 3699999999999999999975443 22211100 00 00 00111 1122334566778888899999
Q ss_pred EEecCCCCCCCCccccc-C---CCCCCCCCCCcccccceee--eecCCC-CHHHHHhcCCCCEEEEeChHHHHHHHhcCC
Q 043412 72 VICHSEPGAWYPPLFDT-L---PCPPTPGYGDFMAVIGRTM--FETDRV-SPEHVKRCNRMDFVWVPTDFHVSTFIRSGV 144 (383)
Q Consensus 72 V~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~ 144 (383)
||+|+..+......+.. . ..+.+ ...++... ...... .......++.+|.++++|+..++.+.+.+.
T Consensus 103 v~~~~~~~~~~~~~~~~~~~~~~~p~v------~~~h~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~ 176 (394)
T 2jjm_A 103 LHVHYAIPHAICAYLAKQMIGERIKIV------TTLHGTDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHELVK 176 (394)
T ss_dssp EEECSSTTHHHHHHHHHHHTTTCSEEE------EECCHHHHHTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHHHTC
T ss_pred EEEcchhHHHHHHHHHHHhhcCCCCEE------EEEecCcccccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhhC
Confidence 99996543221112111 1 11222 22222111 011112 223334468899999999999999988544
Q ss_pred CCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEE
Q 043412 145 DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVL 224 (383)
Q Consensus 145 ~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l 224 (383)
.++++.+||||+|.+.+.+...... +.+++ ++++.++++++|++.+.||++.+++|+..+.++ ++++|
T Consensus 177 ~~~~~~vi~ngv~~~~~~~~~~~~~----~~~~~-------~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l 244 (394)
T 2jjm_A 177 PNKDIQTVYNFIDERVYFKRDMTQL----KKEYG-------ISESEKILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKL 244 (394)
T ss_dssp CSSCEEECCCCCCTTTCCCCCCHHH----HHHTT-------CC---CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEE
T ss_pred CcccEEEecCCccHHhcCCcchHHH----HHHcC-------CCCCCeEEEEeeccccccCHHHHHHHHHHHHhh-CCCEE
Confidence 4679999999999987765432110 11111 246678999999999999999999999999876 67999
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCC---------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+++|+| +..+.++++++++++ .+++..+|+.||++++||..|++|++++|||+||+|||+++.++.
T Consensus 245 ~i~G~g-----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~ 319 (394)
T 2jjm_A 245 LLVGDG-----PEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVGGI 319 (394)
T ss_dssp EEECCC-----TTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCTTS
T ss_pred EEECCc-----hHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCEEEeccccCCCchHHHHHHhcCCCEEEecCCCh
Confidence 999987 456778888777665 366788999999999999999999999999999999999999999
Q ss_pred cccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 296 TEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 296 ~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
.|++.++ +|++++++ |+++++++|.++++|++.+++|++++++.+.++|||+.+++++.++
T Consensus 320 ~e~v~~~~~g~~~~~~------------------d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 381 (394)
T 2jjm_A 320 PEVIQHGDTGYLCEVG------------------DTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYETI 381 (394)
T ss_dssp TTTCCBTTTEEEECTT------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHhhcCCceEEeCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999885 88888776 9999999999999999999999999999887999999999999999
Q ss_pred HHHHHhc
Q 043412 375 IKDILSS 381 (383)
Q Consensus 375 ~~~~~~~ 381 (383)
|++++.+
T Consensus 382 ~~~~~~~ 388 (394)
T 2jjm_A 382 YYDVLRD 388 (394)
T ss_dssp HHHTC--
T ss_pred HHHHHhh
Confidence 9998764
No 2
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=1e-39 Score=305.12 Aligned_cols=347 Identities=16% Similarity=0.121 Sum_probs=245.6
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcc-------cchh---hcCCChhhhhHHHHHHhhhcCCCccEEEecC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ-------SLQF---WEGLPHHMRNLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
.||.++++..++++|.+. +...+ +.....+... .... ...+.. .......+.+.+++.+||+||+|+
T Consensus 13 ~gG~~~~~~~l~~~L~~~-~~V~v-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~Div~~~~ 89 (413)
T 3oy2_A 13 PSGYGRVMRAIVPRISKA-HEVIV-FGIHAFGRSVHANIEEFDAQTAEHVRGLNE-QGFYYSGLSEFIDVHKPDIVMIYN 89 (413)
T ss_dssp CSHHHHHHHHHHHHHTTT-SEEEE-EEESCCSCCSCSSSEEEEHHHHHHHTTCCS-TTCCHHHHHHHHHHHCCSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhc-CCeEE-EeecCCCcccccccccCCcccccccccccc-ccchHHHHHHHHHhcCCCEEEEcc
Confidence 599999999999999998 65443 2222222110 0000 111110 012334566677888999999994
Q ss_pred CCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCC--EEEEeChHHHHHHHhcCCCCCCeEEecC
Q 043412 77 EPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMD--FVWVPTDFHVSTFIRSGVDPAKVVKIVQ 154 (383)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad--~vi~~s~~~~~~~~~~~~~~~~i~vi~n 154 (383)
....+ ...+........ ........+.. ...........++++| .++++|+..++.+.+++. +.++.+|||
T Consensus 90 ~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ii~~S~~~~~~~~~~~~-~~~~~vi~n 162 (413)
T 3oy2_A 90 DPIVI-GNYLLAMGKCSH-RTKIVLYVDLV----SKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYGC-KVPINIVSH 162 (413)
T ss_dssp CHHHH-HHHHHHGGGCCS-CCEEEEEECCC----SBSCCGGGGGGGGCTTEEEEEESSTHHHHHHHHTTC-CSCEEECCC
T ss_pred hHHHH-HHHHHHhccCCC-CCceeeecccc----chhhHHHHHHHHhccCCceEEEcCHHHHHHHHHcCC-CCceEEeCC
Confidence 32211 111111111110 00000111111 1112222344578888 999999999999999877 579999999
Q ss_pred CCcCCCCCCCCCCCCccccCCccccccCCCCCCC--CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 155 PVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 155 gid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|+|.+.+... +.+.+ +++ +.++++++|++.++||++.+++|+..+.++.|+++|+|+|+|+.
T Consensus 163 gvd~~~~~~~---------~~~~~-------~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~ 226 (413)
T 3oy2_A 163 FVDTKTIYDA---------RKLVG-------LSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHH 226 (413)
T ss_dssp CCCCCCCTTH---------HHHTT-------CGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCT
T ss_pred CCCHHHHHHH---------HHhcC-------CCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcc
Confidence 9999877111 11111 234 68999999999999999999999999999999999999999864
Q ss_pred C-CCchHHHHHHHHhhCCCCC------------------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 233 S-GRDFGNKIVNFVEDSDLEK------------------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 233 ~-~~~~~~~~~~~~~~~~~~~------------------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
. .....+.++++++++++.+ ++..+|+.||++|+||.+|+||++++|||+||+|||+|+.+
T Consensus 227 ~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~ 306 (413)
T 3oy2_A 227 ESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVG 306 (413)
T ss_dssp TCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCH
T ss_pred cchhhHHHHHHHHHHHcCcccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCC
Confidence 2 2234577788777776553 45678899999999999999999999999999999999999
Q ss_pred CccccccCCCceeeecccccccccCCCCcc--cccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Q 043412 294 GPTEYLTEENGYPLLVGRMSEVTEGPFKGH--FWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 294 g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~--~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
|..|++.++..++++..... ..++.+|+ ++++.|+++++++| ++++|++.+++|++++++.+.++|||+.+++++
T Consensus 307 g~~e~v~~~~~~~i~~~~~~--~~~~~~G~~gl~~~~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~ 383 (413)
T 3oy2_A 307 GADDYFSGDCVYKIKPSAWI--SVDDRDGIGGIEGIIDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDI 383 (413)
T ss_dssp HHHHHSCTTTSEEECCCEEE--ECTTTCSSCCEEEECCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHH
T ss_pred ChHHHHccCccccccccccc--ccccccCcceeeCCCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 99999998866555543211 12223466 77777999999999 999999999999999999988899999999999
Q ss_pred HHHHHHHHhcc
Q 043412 372 TDHIKDILSSK 382 (383)
Q Consensus 372 ~~~~~~~~~~~ 382 (383)
.++|+++++++
T Consensus 384 ~~~~~~~~~~~ 394 (413)
T 3oy2_A 384 IDFFNSLLRVE 394 (413)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHHhhc
Confidence 99999998653
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=3.1e-40 Score=310.79 Aligned_cols=236 Identities=17% Similarity=0.129 Sum_probs=196.8
Q ss_pred HHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCC----CccccCCccccccCCCCCCCCcE
Q 043412 117 EHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDP----IDLASIGKPVLGLSNMNTSSKEF 191 (383)
Q Consensus 117 ~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~ 191 (383)
.....++.+|.++++|+..++.... ++.++.++.+||||+|.+.|.+..... .....+.+.+ ++++ +
T Consensus 181 ~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~ 252 (439)
T 3fro_A 181 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFG-------MDEG-V 252 (439)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHT-------CCSC-E
T ss_pred HhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcC-------CCCC-c
Confidence 3444568899999999999988554 456778999999999999887653211 0001111222 3455 9
Q ss_pred EEEEeeccc-cccCHHHHHHHHHHHhccC--CCeEEEEEeCCCCCCCchHHHHHHHHhhCC--------C-CCccccccc
Q 043412 192 VFLSVFKWE-YRKGWDVLLKAYLEEFSKA--DGVVLYLLTNPYHSGRDFGNKIVNFVEDSD--------L-EKPDDGWAP 259 (383)
Q Consensus 192 ~i~~~g~~~-~~K~~~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~--------~-~~~v~~~~~ 259 (383)
+++++|++. +.||++.+++|++.+.++. ++++|+++|+|+ ..+.+.++++++.++ + .+++..+|+
T Consensus 253 ~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~---~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 253 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD---PELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp EEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCC---HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred EEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCC---hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 999999999 9999999999999998877 899999999883 234478888887765 1 144678999
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
.||++|+||..|++|++++|||+||+|||+|+.++..|++.+++|++++++ |+++++++|.+
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~~g~~~~~~------------------d~~~la~~i~~ 391 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAG------------------DPGELANAILK 391 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTTTCEEECTT------------------CHHHHHHHHHH
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcCceEEeCCC------------------CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888888877 99999999999
Q ss_pred Hhc-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 340 VVS-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 340 ll~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
+++ |++.+++|++++++.+ ++|||+.+++++.++|+++++++
T Consensus 392 ll~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~ 434 (439)
T 3fro_A 392 ALELSRSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRA 434 (439)
T ss_dssp HHHHTTTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHhcCHHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhh
Confidence 999 9999999999999987 77999999999999999988765
No 4
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.3e-38 Score=299.97 Aligned_cols=233 Identities=20% Similarity=0.200 Sum_probs=194.3
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE 200 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~ 200 (383)
++.+|.++++|+..++.+.+ +|++.+++.+||||+|.+.+.+...... ...+.+++ ++++.++++++|++.
T Consensus 182 ~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~-~~~r~~~~-------~~~~~~~i~~~G~~~ 253 (438)
T 3c48_A 182 VDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRAT-ERSRRELG-------IPLHTKVVAFVGRLQ 253 (438)
T ss_dssp HHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----C-HHHHHHTT-------CCSSSEEEEEESCBS
T ss_pred HhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchh-hhhHHhcC-------CCCCCcEEEEEeeec
Confidence 68899999999999999988 8888889999999999988766533210 00111222 356789999999999
Q ss_pred cccCHHHHHHHHHHHhccCC--CeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------CccccccccCceEEec
Q 043412 201 YRKGWDVLLKAYLEEFSKAD--GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------KPDDGWAPAADVFVLP 267 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~--~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------~~v~~~~~~adi~v~p 267 (383)
+.||++.+++|+..+.++.| +++|+++|+... ..+..+.++++++++++. +++..+|+.||++|+|
T Consensus 254 ~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~-~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~p 332 (438)
T 3c48_A 254 PFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSG-PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVP 332 (438)
T ss_dssp GGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEEC
T ss_pred ccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCC-CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCEEEEC
Confidence 99999999999999988877 899999998211 115567788888877764 3456888999999999
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHH
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDE 346 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~ 346 (383)
|..|+||++++|||+||+|||+++.++..|++.++ +|+++++. |+++++++|.++++|++.
T Consensus 333 s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~------------------d~~~la~~i~~l~~~~~~ 394 (438)
T 3c48_A 333 SFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGH------------------SPHAWADALATLLDDDET 394 (438)
T ss_dssp CSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSC------------------CHHHHHHHHHHHHHCHHH
T ss_pred ccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCC------------------CHHHHHHHHHHHHcCHHH
Confidence 99999999999999999999999999999999885 78888766 999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 347 AKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 347 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
+.+|++++++.+.+ |+|+.+++++.++|++++.++
T Consensus 395 ~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 395 RIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhc
Confidence 99999999998777 999999999999999998653
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=3.4e-38 Score=301.53 Aligned_cols=245 Identities=18% Similarity=0.154 Sum_probs=190.7
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh-cC--------CCCCCeEEecCCCcCCCCCCCCCCCCccccCC----------cccc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR-SG--------VDPAKVVKIVQPVHVGFFDPVNCDPIDLASIG----------KPVL 179 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~-~~--------~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~----------~~~l 179 (383)
+..+..||.|+++|+..++.+.+ ++ ....++.+|+||||.+.|.|............ +..+
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l 315 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEAL 315 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHH
T ss_pred HHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHH
Confidence 34467899999999999998876 33 23568999999999999988654322211000 0000
Q ss_pred c-cCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------
Q 043412 180 G-LSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------- 251 (383)
Q Consensus 180 ~-~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------- 251 (383)
. ..++..+++.++|+++||+.++||++.+++|+.++.++ +.+++++|.|. ......++.....++..
T Consensus 316 ~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~---~~~~~~~~~~~~~~~~~v~~~~~~ 390 (536)
T 3vue_A 316 QAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGK---KKFEKLLKSMEEKYPGKVRAVVKF 390 (536)
T ss_dssp HHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBC---HHHHHHHHHHHHHSTTTEEEECSC
T ss_pred HHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccC---chHHHHHHHHHhhcCCceEEEEec
Confidence 0 01223457889999999999999999999999999764 67888999873 24455566665555432
Q ss_pred --CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCC
Q 043412 252 --KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 252 --~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
+++..+|+.||++|+||++|+||++++|||+||+|||+|+.||.+|+|.++ +|+.+... ..+|.++++.
T Consensus 391 ~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~--------~~~g~l~~~~ 462 (536)
T 3vue_A 391 NAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRL--------SVDCKVVEPS 462 (536)
T ss_dssp CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCC--------CSCTTCCCHH
T ss_pred cHHHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccC--------CCceeEECCC
Confidence 334678999999999999999999999999999999999999999999996 99987643 3678899999
Q ss_pred CHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 329 SVDKLRALMRLVVS--NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 329 ~~~~la~~i~~ll~--~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
|+++|+++|.++++ +.+.+++|++++ +.++|||++++++|.++|+++.
T Consensus 463 d~~~la~ai~ral~~~~~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 463 DVKKVAATLKRAIKVVGTPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHHHHHHHHHHHHTTSHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhcCcHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 99999999998876 455577777776 4578999999999999999863
No 6
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=6.4e-39 Score=297.62 Aligned_cols=335 Identities=17% Similarity=0.129 Sum_probs=244.4
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchh-------hc----CCChhhhhHHHHHHhhhcCCCccEEEec
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQF-------WE----GLPHHMRNLAVELYNTECRTNETVVICH 75 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~l~~~~~~~~pDiV~~~ 75 (383)
.||.++++.++++.| .|+... +.....+......+ +. ............+.+++++.+||+||+|
T Consensus 18 ~gG~~~~~~~l~~~L--~g~~v~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Dvv~~~ 93 (394)
T 3okp_A 18 IGGIQSYLRDFIATQ--DPESIV--VFASTQNAEEAHAYDKTLDYEVIRWPRSVMLPTPTTAHAMAEIIREREIDNVWFG 93 (394)
T ss_dssp CSHHHHHHHHHHTTS--CGGGEE--EEEECSSHHHHHHHHTTCSSEEEEESSSSCCSCHHHHHHHHHHHHHTTCSEEEES
T ss_pred cchHHHHHHHHHHHh--cCCeEE--EEECCCCccchhhhccccceEEEEccccccccchhhHHHHHHHHHhcCCCEEEEC
Confidence 699999999999999 355433 33332221100000 00 1111233566788889999999999999
Q ss_pred CCCCCCCCccc-ccCCCCCCCCCCCcccccceeee-ecCC-CCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEe
Q 043412 76 SEPGAWYPPLF-DTLPCPPTPGYGDFMAVIGRTMF-ETDR-VSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKI 152 (383)
Q Consensus 76 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi 152 (383)
..........+ .....+.+ +...++.... .... ........++.+|.++++|+..++.+.+.+.+..++.+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~-----i~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi 168 (394)
T 3okp_A 94 AAAPLALMAGTAKQAGASKV-----IASTHGHEVGWSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHL 168 (394)
T ss_dssp SCTTGGGGHHHHHHTTCSEE-----EEECCSTHHHHTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEEC
T ss_pred CcchHHHHHHHHHhcCCCcE-----EEEeccchhhhhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEe
Confidence 75443222221 12222212 1122221111 0011 112233346889999999999999999844355799999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH 232 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~ 232 (383)
|||+|.+.+.+...... ...+.+++ ++++.++++++|++.+.||++.+++|+..+.++.++++|+++|+|
T Consensus 169 ~ngv~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g-- 238 (394)
T 3okp_A 169 PSGVDVKRFTPATPEDK-SATRKKLG-------FTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSG-- 238 (394)
T ss_dssp CCCBCTTTSCCCCHHHH-HHHHHHTT-------CCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCC--
T ss_pred cCCcCHHHcCCCCchhh-HHHHHhcC-------CCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCc--
Confidence 99999988876332110 01111222 356779999999999999999999999999998999999999987
Q ss_pred CCCchHHHHHHHHhh-------CCCC--CccccccccCceEEecCCC-------CCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 233 SGRDFGNKIVNFVED-------SDLE--KPDDGWAPAADVFVLPSRG-------EGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 233 ~~~~~~~~~~~~~~~-------~~~~--~~v~~~~~~adi~v~ps~~-------e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
+..+.+++++.. .|.. +++..+|+.||++++||.. |++|++++|||++|+|||+++.++..
T Consensus 239 ---~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~ 315 (394)
T 3okp_A 239 ---RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP 315 (394)
T ss_dssp ---TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG
T ss_pred ---hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChH
Confidence 556777776632 2333 5678899999999999999 99999999999999999999999999
Q ss_pred ccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 297 EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 297 e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
|++.+++|++++++ |+++++++|.++++|++.+++|++++++.+.++|||+.+++++.++|+
T Consensus 316 e~i~~~~g~~~~~~------------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 377 (394)
T 3okp_A 316 ETVTPATGLVVEGS------------------DVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQ 377 (394)
T ss_dssp GGCCTTTEEECCTT------------------CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred HHHhcCCceEeCCC------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99988888888876 999999999999999999999999999998889999999999999999
Q ss_pred HHHhc
Q 043412 377 DILSS 381 (383)
Q Consensus 377 ~~~~~ 381 (383)
++.++
T Consensus 378 ~~~r~ 382 (394)
T 3okp_A 378 SEPRK 382 (394)
T ss_dssp SCCC-
T ss_pred HhccC
Confidence 87643
No 7
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=7.8e-39 Score=299.42 Aligned_cols=338 Identities=16% Similarity=0.131 Sum_probs=234.7
Q ss_pred CCCCCCCChhHHHHHHHHHHHhcccCCCceeeeecCCCccc-----chhhc-----CCChhhh----hHHHHHHhhhcCC
Q 043412 2 APFLSGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQS-----LQFWE-----GLPHHMR----NLAVELYNTECRT 67 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~----~~~~~l~~~~~~~ 67 (383)
++.+..||.++++.++++.|.+.|+...+.. ....+.... ...+. .++.... .....+.+++++.
T Consensus 47 ~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 125 (416)
T 2x6q_A 47 NSTSFGGGVAEILHSLVPLLRSIGIEARWFV-IEGPTEFFNVTKTFHNALQGNESLKLTEEMKELYLNVNRENSKFIDLS 125 (416)
T ss_dssp ESCSSSSTHHHHHHHHHHHHHHTTCEEEEEE-CCCCHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHHHHHHSSCGG
T ss_pred eCCCCCCCHHHHHHHHHHHHHhCCCeEEEEE-ccCCcchhhhhcccceeecccccccccHHHHHHHHHHHHHHHHHHhhc
Confidence 3456789999999999999999987654322 111111110 00011 1221111 1223456677888
Q ss_pred CccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEE-EeChHHHHHHHhcCCCC
Q 043412 68 NETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVW-VPTDFHVSTFIRSGVDP 146 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi-~~s~~~~~~~~~~~~~~ 146 (383)
+||+||+|+........++... .+.+ .+.++............+.+.+.++|.++ ++|+..++ +++.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~~-~p~v------~~~h~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-----~~~~ 193 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEKK-SPWL------WRCHIDLSSPNREFWEFLRRFVEKYDRYIFHLPEYVQP-----ELDR 193 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCCC-SCEE------EECCSCCSSCCHHHHHHHHHHHTTSSEEEESSGGGSCT-----TSCT
T ss_pred CCCEEEEeccchhhHHHHHHhc-CCEE------EEEccccCCccHHHHHHHHHHHHhCCEEEEechHHHHh-----hCCc
Confidence 9999999976553333222211 1111 22222111000001122334467888877 55554443 3344
Q ss_pred CCeEEecCCCcCCCCCCCCCCCCc-cccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEE
Q 043412 147 AKVVKIVQPVHVGFFDPVNCDPID-LASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLY 225 (383)
Q Consensus 147 ~~i~vi~ngid~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~ 225 (383)
.++.+||||+|...+.+....... ...+.++ +++++.++++++|++.+.||++.+++|+..+.++.|+++|+
T Consensus 194 ~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~-------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~ 266 (416)
T 2x6q_A 194 NKAVIMPPSIDPLSEKNVELKQTEILRILERF-------DVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLL 266 (416)
T ss_dssp TTEEECCCCBCTTSTTTSCCCHHHHHHHHHHT-------TCCTTSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEE
T ss_pred cceEEeCCCCChhhhcccccChhhHHHHHHHh-------CCCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEE
Confidence 689999999998766543221100 0011112 23567889999999999999999999999999889999999
Q ss_pred EEeCCCCCCCchHHHHHHHHhhCCCCC--------------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 226 LLTNPYHSGRDFGNKIVNFVEDSDLEK--------------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 226 i~G~~~~~~~~~~~~~~~~~~~~~~~~--------------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
++|+|+..++...+.++++++.+++.+ ++..+|+.||++|+||..|+||++++|||+||+|||+++
T Consensus 267 i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~ 346 (416)
T 2x6q_A 267 LVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRA 346 (416)
T ss_dssp EEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEES
T ss_pred EEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEcc
Confidence 999985433344566777777766542 456788999999999999999999999999999999999
Q ss_pred CCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 292 WSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 292 ~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
.+|..|++.++ +|++++ |+++++++|.++++|++.+++|++++++.+.++|||+.++++
T Consensus 347 ~~g~~e~i~~~~~g~l~~--------------------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~ 406 (416)
T 2x6q_A 347 VGGIKFQIVDGETGFLVR--------------------DANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMER 406 (416)
T ss_dssp CHHHHHHCCBTTTEEEES--------------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTBHHHHHHH
T ss_pred CCCChhheecCCCeEEEC--------------------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 99999999875 777776 899999999999999999999999999998889999999999
Q ss_pred HHHHHHHHH
Q 043412 371 VTDHIKDIL 379 (383)
Q Consensus 371 ~~~~~~~~~ 379 (383)
+.++|++++
T Consensus 407 ~~~~~~~l~ 415 (416)
T 2x6q_A 407 YLDILNSLG 415 (416)
T ss_dssp HHHHHHTC-
T ss_pred HHHHHHHhh
Confidence 999998765
No 8
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=5.4e-39 Score=307.48 Aligned_cols=237 Identities=19% Similarity=0.186 Sum_probs=194.4
Q ss_pred hcCCCCEEEEeChHHHHHHHhc---C-C----CCCCeEEecCCCcCCCCCCCCCCCCccccCCccc-----cccCCCCCC
Q 043412 121 RCNRMDFVWVPTDFHVSTFIRS---G-V----DPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPV-----LGLSNMNTS 187 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~~---~-~----~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~-----l~~~~~~~~ 187 (383)
.++.+|.++++|+..++.+.+. | + +++++.+||||+|.+.|.+..........+.+++ + +
T Consensus 187 ~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~~~~~~~r~~~~~~~~~~-------~ 259 (499)
T 2r60_A 187 TMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSE-------R 259 (499)
T ss_dssp HHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCHHHHHHHHHHHHHHSCGG-------G
T ss_pred HHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcCccchhhhHHHHHHHhccccccc-------C
Confidence 3688999999999999988764 6 5 6789999999999988766432100000011111 2 3
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCC-eEEEEEeCCCCC----------CCchHHHHHHHHhhCCCCC----
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG-VVLYLLTNPYHS----------GRDFGNKIVNFVEDSDLEK---- 252 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~-~~l~i~G~~~~~----------~~~~~~~~~~~~~~~~~~~---- 252 (383)
++.++|+++|++.+.||++.+++|+..+.++.++ ++++++|+.... +.++.+.++++++++++.+
T Consensus 260 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 260 MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 5678899999999999999999999998776554 589999983211 0112788888998887753
Q ss_pred -------ccccccccC----ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCC
Q 043412 253 -------PDDGWAPAA----DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPF 320 (383)
Q Consensus 253 -------~v~~~~~~a----di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~ 320 (383)
++..+|+.| |++|+||..|+||++++|||+||+|||+|+.+|..|++.++ +|++++++
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~---------- 409 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPE---------- 409 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTT----------
T ss_pred CCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCC----------
Confidence 456888999 99999999999999999999999999999999999999886 88888876
Q ss_pred CcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 321 KGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 321 ~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
|+++++++|.++++|++.+++|++++++.+.++|||+.+++++.++|++++.++
T Consensus 410 --------d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 463 (499)
T 2r60_A 410 --------DPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRK 463 (499)
T ss_dssp --------CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-
T ss_pred --------CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999998888999999999999999998653
No 9
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1.9e-38 Score=292.45 Aligned_cols=337 Identities=16% Similarity=0.100 Sum_probs=237.6
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCCh-------hhhhHHHHHHhhhcCCCccEEEecCCC
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPH-------HMRNLAVELYNTECRTNETVVICHSEP 78 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~pDiV~~~~~~ 78 (383)
..||.++++.+++++|.++|+...+... ...+...+.-.+..++. ........+.+++++.+||+||+|+..
T Consensus 12 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~Dvv~~~~~~ 90 (374)
T 2iw1_A 12 PFGGLQRDFMRIASTVAARGHHVRVYTQ-SWEGDCPKAFELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVGFNKM 90 (374)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCEEEEES-EECSCCCTTCEEEECCCCCSSHHHHHHHHHHHHHHHHHHSCCSEEEESSCC
T ss_pred CCcchhhHHHHHHHHHHhCCCeEEEEec-CCCCCCCCCcEEEEEccCcccchhhHHHHHHHHHHHHhccCCCEEEEecCC
Confidence 4599999999999999999986654222 11221111101111221 122334567778888999999999754
Q ss_pred CCCCCcccccCCCCCCCCCCCcccccceeeeecC--CCCHHHHH-hc--CCCCEEEEeChHHHHHHHh-cCCCCCCeEEe
Q 043412 79 GAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETD--RVSPEHVK-RC--NRMDFVWVPTDFHVSTFIR-SGVDPAKVVKI 152 (383)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~--~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi 152 (383)
..+...+. ...+. .......++....... .....+.+ .+ +.+|.++++|+..++.+.+ ++.++.++.++
T Consensus 91 ~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi 165 (374)
T 2iw1_A 91 PGLDVYFA-ADVCY----AEKVAQEKGFLYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQIL 165 (374)
T ss_dssp TTCSEEEC-CSCCH----HHHHHHHCCHHHHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCceeeec-ccccc----ceeeeecccchhhhcHHHHHHHHHHHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEe
Confidence 43221111 11110 0001111111100000 00001111 12 4799999999999999988 78888899999
Q ss_pred cCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhcc-CCCeEEEEEeCCC
Q 043412 153 VQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK-ADGVVLYLLTNPY 231 (383)
Q Consensus 153 ~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~-~~~~~l~i~G~~~ 231 (383)
|||+|.+.+.+..........+.+++ ++++.++++++|++.+.||++.+++|+..+.++ .++++|+++|+++
T Consensus 166 ~ngv~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~ 238 (374)
T 2iw1_A 166 PPGIYPDRKYSEQIPNSREIYRQKNG-------IKEQQNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDK 238 (374)
T ss_dssp CCCCCGGGSGGGSCTTHHHHHHHHTT-------CCTTCEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC
T ss_pred cCCcCHHhcCcccchhHHHHHHHHhC-------CCCCCeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCC
Confidence 99999988766543221111112222 356789999999999999999999999988766 5799999999873
Q ss_pred CCCCchHHHHHHHHhhCCC---------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-
Q 043412 232 HSGRDFGNKIVNFVEDSDL---------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE- 301 (383)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~- 301 (383)
.+.++++++.+++ .+++..+|+.||++++||..|++|++++|||+||+|||+++.++..|++.+
T Consensus 239 ------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~ 312 (374)
T 2iw1_A 239 ------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA 312 (374)
T ss_dssp ------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH
T ss_pred ------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccC
Confidence 2455555555443 467789999999999999999999999999999999999999999999987
Q ss_pred CCceeee-cccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 302 ENGYPLL-VGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 302 ~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++|++++ ++ |+++++++|.++++|++.+++|++++++.+ ++|+|+.+++++.++++..+.
T Consensus 313 ~~g~~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 313 NCGTVIAEPF------------------SQEQLNEVLRKALTQSPLRMAWAENARHYA-DTQDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp TCEEEECSSC------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HHSCCSCHHHHHHHHHHCC--
T ss_pred CceEEeCCCC------------------CHHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHhhc
Confidence 5888886 55 999999999999999999999999999975 567999999999999887653
No 10
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1e-37 Score=297.59 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=186.3
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh--cC--------CCCCCeEEecCCCcCCCCCCCCCCCC---------------cccc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR--SG--------VDPAKVVKIVQPVHVGFFDPVNCDPI---------------DLAS 173 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~--~~--------~~~~~i~vi~ngid~~~~~~~~~~~~---------------~~~~ 173 (383)
...++.+|.++++|+..++.+.+ +| .++.++.+||||+|.+.|.+...... ....
T Consensus 201 ~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (485)
T 1rzu_A 201 KGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAV 280 (485)
T ss_dssp HHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHH
T ss_pred HHHHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHH
Confidence 34468899999999999998876 34 35679999999999988876543210 0000
Q ss_pred CCccccccCCCCCCCC-cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---
Q 043412 174 IGKPVLGLSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD--- 249 (383)
Q Consensus 174 ~~~~~l~~~~~~~~~~-~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~--- 249 (383)
+.+++ ++++ .++++++||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.+.++++++.++
T Consensus 281 r~~~~-------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~---~~~~~~l~~~~~~~~~~v 348 (485)
T 1rzu_A 281 AEHFR-------IDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRLVVLGAGD---VALEGALLAAASRHHGRV 348 (485)
T ss_dssp HHHHT-------CCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEEEEEECBC---HHHHHHHHHHHHHTTTTE
T ss_pred HHhcC-------CCCCCCeEEEEEccCccccCHHHHHHHHHHHHh--cCceEEEEeCCc---hHHHHHHHHHHHhCCCcE
Confidence 11112 2343 6799999999999999999999999876 489999999872 235677777776653
Q ss_pred -----CCCc-cccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC----------CCceeeeccccc
Q 043412 250 -----LEKP-DDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE----------ENGYPLLVGRMS 313 (383)
Q Consensus 250 -----~~~~-v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~----------~~g~~~~~~~~~ 313 (383)
..++ +..+|+.||++|+||.+|+||++++|||+||+|||+|+.+|..|++.+ .+|++++++
T Consensus 349 ~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~--- 425 (485)
T 1rzu_A 349 GVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPV--- 425 (485)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSC---
T ss_pred EEecCCCHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCC---
Confidence 2222 358899999999999999999999999999999999999999999987 477777766
Q ss_pred ccccCCCCcccccCCCHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 314 EVTEGPFKGHFWAEPSVDKLRALMRLVV---SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 314 ~~~~~~~~g~~~~~~~~~~la~~i~~ll---~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
|+++++++|.+++ +|++.+++|++++++ ++|||+.+++++.++|++++.+
T Consensus 426 ---------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~~~~ 478 (485)
T 1rzu_A 426 ---------------TLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQLISK 478 (485)
T ss_dssp ---------------SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHHTC-
T ss_pred ---------------CHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHhhCC
Confidence 9999999999999 799999999999864 7999999999999999998764
No 11
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=9.9e-37 Score=290.81 Aligned_cols=230 Identities=15% Similarity=0.083 Sum_probs=185.0
Q ss_pred HHhcCCCCEEEEeChHHHHHHHh--cCCC--------C--CCeEEecCCCcCCCCCCCCCCCC---------------cc
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIR--SGVD--------P--AKVVKIVQPVHVGFFDPVNCDPI---------------DL 171 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~--~~~~--------~--~~i~vi~ngid~~~~~~~~~~~~---------------~~ 171 (383)
...++.+|.++++|+..++.+.+ +|.. + .++.+||||+|.+.|.+...... ..
T Consensus 199 ~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (485)
T 2qzs_A 199 KAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKR 278 (485)
T ss_dssp HHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHH
T ss_pred HHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHH
Confidence 34468899999999999998865 3432 2 68999999999988876543110 00
Q ss_pred ccCCccccccCCCCCCC--CcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC
Q 043412 172 ASIGKPVLGLSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD 249 (383)
Q Consensus 172 ~~~~~~~l~~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~ 249 (383)
..+.+++ +++ +.++++++||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+.+.+++++..++
T Consensus 279 ~~r~~~~-------~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~~~~l~ivG~g~---~~~~~~l~~~~~~~~ 346 (485)
T 2qzs_A 279 QLQIAMG-------LKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--QGGQLALLGAGD---PVLQEGFLAAAAEYP 346 (485)
T ss_dssp HHHHHHT-------CCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--TTCEEEEEEEEC---HHHHHHHHHHHHHST
T ss_pred HHHHHcC-------CCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--CCcEEEEEeCCc---hHHHHHHHHHHHhCC
Confidence 0011112 233 67899999999999999999999999876 489999999872 135677887777654
Q ss_pred --------CCC-ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC----------CCceeeecc
Q 043412 250 --------LEK-PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE----------ENGYPLLVG 310 (383)
Q Consensus 250 --------~~~-~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~----------~~g~~~~~~ 310 (383)
..+ .+..+|+.||++|+||.+|+||++++|||+||+|||+|+.+|..|++.+ .+|++++++
T Consensus 347 ~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~ 426 (485)
T 2qzs_A 347 GQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDS 426 (485)
T ss_dssp TTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSS
T ss_pred CcEEEeCCCCHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCC
Confidence 222 2368899999999999999999999999999999999999999999987 477877766
Q ss_pred cccccccCCCCcccccCCCHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 311 RMSEVTEGPFKGHFWAEPSVDKLRALMRLVV---SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 311 ~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll---~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
|+++++++|.+++ +|++.+.+|++++++ ++|||+.+++++.++|++++.+
T Consensus 427 ------------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 427 ------------------NAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp ------------------SHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC--
T ss_pred ------------------CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhhhh
Confidence 9999999999999 799999999999864 7999999999999999998643
No 12
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=8.4e-37 Score=284.55 Aligned_cols=324 Identities=16% Similarity=0.104 Sum_probs=233.8
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCc--ccc----hhhcCCCh--------hhhhHHHHHHhhhcCCCccEE
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDL--QSL----QFWEGLPH--------HMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~--~~~----~~~~~~~~--------~~~~~~~~l~~~~~~~~pDiV 72 (383)
.||.+.++.+++++|.+.|+...+ ........ ... ..+..++. ........+.+++++.+||+|
T Consensus 34 ~gG~~~~~~~l~~~L~~~G~~V~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~Dii 111 (406)
T 2gek_A 34 PGGVQSHVLQLAEVLRDAGHEVSV--LAPASPHVKLPDYVVSGGKAVPIPYNGSVARLRFGPATHRKVKKWIAEGDFDVL 111 (406)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEE--EESCCTTSCCCTTEEECCCCC------------CCHHHHHHHHHHHHHHCCSEE
T ss_pred CCcHHHHHHHHHHHHHHCCCeEEE--EecCCccccCCcccccCCcEEeccccCCcccccccHHHHHHHHHHHHhcCCCEE
Confidence 489999999999999999875443 22222111 000 00111111 011133567778888899999
Q ss_pred EecCCCCCCCCcccccC-CCCCCCCCCCcccccceeeeec--CCCCHHHHHhcCCCCEEEEeChHHHHHHHh-cCCCCCC
Q 043412 73 ICHSEPGAWYPPLFDTL-PCPPTPGYGDFMAVIGRTMFET--DRVSPEHVKRCNRMDFVWVPTDFHVSTFIR-SGVDPAK 148 (383)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~ 148 (383)
|+|..........+... ..+.+ ...++...... ..+...+...++.+|.++++|+..++.+.+ ++. .+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~i------~~~h~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~--~~ 183 (406)
T 2gek_A 112 HIHEPNAPSLSMLALQAAEGPIV------ATFHTSTTKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGS--DA 183 (406)
T ss_dssp EEECCCSSSHHHHHHHHEESSEE------EEECCCCCSHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSS--CE
T ss_pred EECCccchHHHHHHHHhcCCCEE------EEEcCcchhhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCC--Cc
Confidence 99976553321111111 12222 11111110000 000001114468999999999999999877 443 48
Q ss_pred eEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc-ccccCHHHHHHHHHHHhccCCCeEEEEE
Q 043412 149 VVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW-EYRKGWDVLLKAYLEEFSKADGVVLYLL 227 (383)
Q Consensus 149 i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~l~i~ 227 (383)
+ +||||+|.+.+.+...... .+++.++++++|++ .+.||++.+++++..+.++.|+++|+++
T Consensus 184 ~-vi~~~v~~~~~~~~~~~~~----------------~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~ 246 (406)
T 2gek_A 184 V-EIPNGVDVASFADAPLLDG----------------YPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIV 246 (406)
T ss_dssp E-ECCCCBCHHHHHTCCCCTT----------------CSCSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEE
T ss_pred E-EecCCCChhhcCCCchhhh----------------ccCCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 8 9999999877655432110 12346789999999 9999999999999999998899999999
Q ss_pred eCCCCCCCchHHHHHHHHhhC-------CCC--CccccccccCceEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCccc
Q 043412 228 TNPYHSGRDFGNKIVNFVEDS-------DLE--KPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTE 297 (383)
Q Consensus 228 G~~~~~~~~~~~~~~~~~~~~-------~~~--~~v~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~g~~e 297 (383)
|++ +. +.++++++.+ |.. +++..+|+.||++|+||. .|++|++++|||+||+|||+++.++..|
T Consensus 247 G~~-----~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e 320 (406)
T 2gek_A 247 GRG-----DE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRR 320 (406)
T ss_dssp SCS-----CH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHH
T ss_pred cCC-----cH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHH
Confidence 987 33 6666665543 333 345789999999999996 9999999999999999999999999999
Q ss_pred cccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 298 YLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 298 ~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
++.++ +|++++++ |+++++++|.++++|++.+.+|++++++.+. .|+|+.+++++.++|+
T Consensus 321 ~i~~~~~g~~~~~~------------------d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~ 381 (406)
T 2gek_A 321 VLADGDAGRLVPVD------------------DADGMAAALIGILEDDQLRAGYVARASERVH-RYDWSVVSAQIMRVYE 381 (406)
T ss_dssp HHTTTTSSEECCTT------------------CHHHHHHHHHHHHHCHHHHHHHHHHHHHHGG-GGBHHHHHHHHHHHHH
T ss_pred HhcCCCceEEeCCC------------------CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHH
Confidence 99975 88888766 9999999999999999999999999999876 9999999999999999
Q ss_pred HHHhcc
Q 043412 377 DILSSK 382 (383)
Q Consensus 377 ~~~~~~ 382 (383)
+++.++
T Consensus 382 ~~~~~~ 387 (406)
T 2gek_A 382 TVSGAG 387 (406)
T ss_dssp HHCCTT
T ss_pred HHHhhc
Confidence 988653
No 13
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=1.4e-35 Score=292.27 Aligned_cols=235 Identities=15% Similarity=0.158 Sum_probs=190.3
Q ss_pred hcCCCCEEEEeChHHHHHHHh----c------------------CCCCCCeEEecCCCcCCCCCCCCCCCCc--------
Q 043412 121 RCNRMDFVWVPTDFHVSTFIR----S------------------GVDPAKVVKIVQPVHVGFFDPVNCDPID-------- 170 (383)
Q Consensus 121 ~~~~ad~vi~~s~~~~~~~~~----~------------------~~~~~~i~vi~ngid~~~~~~~~~~~~~-------- 170 (383)
.++.||.|+++|+..++.+.+ + +....++.|||||+|.+.|.|.......
T Consensus 471 ~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i 550 (816)
T 3s28_A 471 AMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI 550 (816)
T ss_dssp HHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHH
T ss_pred HHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccc
Confidence 368899999999998884221 1 1222399999999999999876543211
Q ss_pred -------cccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC------CCch
Q 043412 171 -------LASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS------GRDF 237 (383)
Q Consensus 171 -------~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~------~~~~ 237 (383)
...+..+++- .+++.++|+++||+.+.||++.+++|+.++.+..++++|+|+|+++.. ...+
T Consensus 551 ~~~l~~p~~~r~~lg~l-----~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~ 625 (816)
T 3s28_A 551 EELLYSDVENKEHLCVL-----KDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAE 625 (816)
T ss_dssp HHHHHCSCCBTTEESCB-----SCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHH
T ss_pred cccccchhhHHHHhccc-----CCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHH
Confidence 0111111110 156789999999999999999999999999887889999999998420 0125
Q ss_pred HHHHHHHHhhCCCCCccc---------------cccc-cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC
Q 043412 238 GNKIVNFVEDSDLEKPDD---------------GWAP-AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE 301 (383)
Q Consensus 238 ~~~~~~~~~~~~~~~~v~---------------~~~~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~ 301 (383)
.+.++++++++++.+++. .+++ .+|++|+||.+|+||++++|||+||+|||+|+.+|..|++.+
T Consensus 626 ~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIasd~GG~~EiV~d 705 (816)
T 3s28_A 626 MKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVH 705 (816)
T ss_dssp HHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCB
T ss_pred HHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEeCCCChHHHHcc
Confidence 678888999988865543 3344 689999999999999999999999999999999999999988
Q ss_pred C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 302 E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV----SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 302 ~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll----~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+ +|+++++. |+++++++|.+++ .|++.+++|++++++.+.++|||+.+++++.++|+
T Consensus 706 g~~Gllv~p~------------------D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 706 GKSGFHIDPY------------------HGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp TTTBEEECTT------------------SHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CCcEEEeCCC------------------CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 6 88888877 9999999997776 89999999999999998899999999999999998
Q ss_pred HH
Q 043412 377 DI 378 (383)
Q Consensus 377 ~~ 378 (383)
.+
T Consensus 768 ~~ 769 (816)
T 3s28_A 768 VY 769 (816)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=2.9e-35 Score=267.98 Aligned_cols=291 Identities=15% Similarity=-0.016 Sum_probs=215.4
Q ss_pred CCCChhHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCChhhhhHHHHHHhhhcCCCccEEEecCCCCCCCCcc
Q 043412 6 SGGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMRNLAVELYNTECRTNETVVICHSEPGAWYPPL 85 (383)
Q Consensus 6 ~~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~ 85 (383)
..||.++++.+++++|.+.|+...+ .....+.. ......-.+. .....+.+++++.+||+||+|+....+..
T Consensus 28 ~~gG~~~~~~~l~~~L~~~G~~v~v--~~~~~~~~-~~~~~~~~~~---~~~~~l~~~l~~~~~Dvi~~~~~~~~~~~-- 99 (342)
T 2iuy_A 28 GYGGIQWVVANLMDGLLELGHEVFL--LGAPGSPA-GRPGLTVVPA---GEPEEIERWLRTADVDVVHDHSGGVIGPA-- 99 (342)
T ss_dssp SSCHHHHHHHHHHHHHHHTTCEEEE--ESCTTSCC-CSTTEEECSC---CSHHHHHHHHHHCCCSEEEECSSSSSCST--
T ss_pred cCChHHHHHHHHHHHHHHcCCeEEE--EecCCCCC-CCCcceeccC---CcHHHHHHHHHhcCCCEEEECCchhhHHH--
Confidence 3599999999999999999876443 22222111 1111111111 12346777888889999999975443221
Q ss_pred cccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCC
Q 043412 86 FDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVN 165 (383)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~ 165 (383)
.... +.+ +...++...+. ..+|.++++|+..++.+.+ ..++.+||||+|.+.+.+..
T Consensus 100 -----~~~~-~~p-v~~~h~~~~~~------------~~~d~ii~~S~~~~~~~~~----~~~~~vi~ngvd~~~~~~~~ 156 (342)
T 2iuy_A 100 -----GLPP-GTA-FISSHHFTTRP------------VNPVGCTYSSRAQRAHCGG----GDDAPVIPIPVDPARYRSAA 156 (342)
T ss_dssp -----TCCT-TCE-EEEEECSSSBC------------SCCTTEEESCHHHHHHTTC----CTTSCBCCCCBCGGGSCCST
T ss_pred -----Hhhc-CCC-EEEecCCCCCc------------ccceEEEEcCHHHHHHHhc----CCceEEEcCCCChhhcCccc
Confidence 1111 223 33333332211 1299999999999998876 46899999999988776654
Q ss_pred CCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHH
Q 043412 166 CDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFV 245 (383)
Q Consensus 166 ~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~ 245 (383)
.. .++..+++++|++.+.||++.+++|++.+ +++|+++|+| +..+.+++++
T Consensus 157 ~~-------------------~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g-----~~~~~l~~~~ 207 (342)
T 2iuy_A 157 DQ-------------------VAKEDFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPA-----WEPEYFDEIT 207 (342)
T ss_dssp TC-------------------CCCCSCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCC-----CCHHHHHHHH
T ss_pred cc-------------------CCCCCEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCc-----ccHHHHHHHH
Confidence 31 12345799999999999999999999887 7899999988 3455666665
Q ss_pred hhC-------CCCC--ccccccccCceEEecCC----------CCCCChHHHHHHHcCCCEEEcCCCCccccccC--CCc
Q 043412 246 EDS-------DLEK--PDDGWAPAADVFVLPSR----------GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE--ENG 304 (383)
Q Consensus 246 ~~~-------~~~~--~v~~~~~~adi~v~ps~----------~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~--~~g 304 (383)
+.+ |..+ ++..+|+.||++++||. .|+||++++|||+||+|||+|+.++..|++.+ +
T Consensus 208 ~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~-- 285 (342)
T 2iuy_A 208 RRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGE-- 285 (342)
T ss_dssp HHHTTTEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEE--
T ss_pred HHhCCCEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCC--
Confidence 554 3333 44789999999999999 79999999999999999999999999999987 5
Q ss_pred eeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcc
Q 043412 305 YPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSSK 382 (383)
Q Consensus 305 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 382 (383)
.+|+++++ |+++++++|.++++ ++++++.+.++|||+.+++++.++|+++++++
T Consensus 286 ---------------~~g~~~~~-d~~~l~~~i~~l~~--------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 286 ---------------VVGYGTDF-APDEARRTLAGLPA--------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp ---------------ECCSSSCC-CHHHHHHHHHTSCC--------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred ---------------CceEEcCC-CHHHHHHHHHHHHH--------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 23455556 89999999999987 56778877899999999999999999998764
No 15
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.97 E-value=2.8e-33 Score=260.02 Aligned_cols=214 Identities=10% Similarity=-0.002 Sum_probs=158.9
Q ss_pred cCCCC--EEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecc
Q 043412 122 CNRMD--FVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKW 199 (383)
Q Consensus 122 ~~~ad--~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~ 199 (383)
+..++ .++++|++.++.+.+.|++..++.+++||+|.+.+.+.... .++...++++||+
T Consensus 190 ~~~~~~~~vi~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~~~-------------------~~~~~~il~~gr~ 250 (413)
T 2x0d_A 190 YKYRGPQIAVFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYINDK-------------------RQKEKIILVYGRP 250 (413)
T ss_dssp TSCCSCEEEEEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTTSC-------------------CCCCSEEEEEECT
T ss_pred hccCCceEEEEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccccc-------------------cCCCCEEEEEecC
Confidence 45554 68999999999999887765689999999987655432110 1234567788986
Q ss_pred -ccccCHHHHHHHHHHHhccCCC---eEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCCCCC
Q 043412 200 -EYRKGWDVLLKAYLEEFSKADG---VVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRGEGW 273 (383)
Q Consensus 200 -~~~K~~~~ll~a~~~l~~~~~~---~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~e~~ 273 (383)
.++||++.+++|+..+.++.|+ ++|+++|++.... .. .+...+..+|.. +++..+|+.||++++||.+|+|
T Consensus 251 ~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-~l--~~~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~ 327 (413)
T 2x0d_A 251 SVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-AL--GKGIHLNSLGKLTLEDYADLLKRSSIGISLMISPHP 327 (413)
T ss_dssp TCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-EE--ETTEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSC
T ss_pred chhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-hc--CCcCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCC
Confidence 6899999999999999888775 8999999874320 00 011112233432 5678999999999999999999
Q ss_pred ChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHH
Q 043412 274 GRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGK 352 (383)
Q Consensus 274 ~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~ 352 (383)
|++++||||||+|||++ .+|..|++.++ +|+++++. |+++++++|.++++|++++++
T Consensus 328 g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv~~~------------------d~~~la~ai~~ll~~~~~~~~--- 385 (413)
T 2x0d_A 328 SYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQL------------------NPENIAETLVELCMSFNNRDV--- 385 (413)
T ss_dssp CSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEESSC------------------SHHHHHHHHHHHHHHTC-------
T ss_pred CcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEeCCC------------------CHHHHHHHHHHHHcCHHHHHH---
Confidence 99999999999999995 45678999875 78888776 999999999999999887766
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 353 QAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 353 ~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
++++. .+.|+|+.+.++ .++|++++.+
T Consensus 386 ~~~~~-~~~~~W~~~~~~-~~~~~~l~~~ 412 (413)
T 2x0d_A 386 DKKES-SNMMFYINEFNE-FSFIKEIEEK 412 (413)
T ss_dssp ---CC-BSCGGGCCCC----TTHHHHHTT
T ss_pred hHHHH-HHhCCHHHHHHH-HHHHHHHHhh
Confidence 45554 468999999888 7888887653
No 16
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.96 E-value=2e-29 Score=244.89 Aligned_cols=312 Identities=12% Similarity=0.040 Sum_probs=212.3
Q ss_pred CCCCCCCChhHHHHHHHHH--HHhcccCCCceeeeecC--CCcccchh-----hcCCChhhhhHHHHHHhhhcCCCccEE
Q 043412 2 APFLSGGGYSSESWSYILA--LNEHVKNPRFKLAIEHH--GDLQSLQF-----WEGLPHHMRNLAVELYNTECRTNETVV 72 (383)
Q Consensus 2 ~p~~~~~G~~~~~~~l~~~--l~~~g~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~pDiV 72 (383)
++.+.+||.+.++.++++. +.+.|+... +..... .+...... +..++ ......+.+++++.+||||
T Consensus 212 ~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~~~Div 286 (568)
T 2vsy_A 212 SNGFGAHPTGLLTVALFEALQRRQPDLQMH--LFATSGDDGSTLRTRLAQASTLHDVT---ALGHLATAKHIRHHGIDLL 286 (568)
T ss_dssp ESCSSSSHHHHHHHHHHHHHHHHCTTEEEE--EEESSCCCSCHHHHHHHHTSEEEECT---TCCHHHHHHHHHHTTCSEE
T ss_pred CcccccChHHHHHHHHHhhccCCcccEEEE--EEECCCCCccHHHHHHHhcCeEEECC---CCCHHHHHHHHHhCCCCEE
Confidence 4667789999999999999 666664332 222211 11111110 00111 1124567888899999999
Q ss_pred EecCCCCC-CCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEE
Q 043412 73 ICHSEPGA-WYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVK 151 (383)
Q Consensus 73 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~v 151 (383)
|+++.... .....+.....+.. ...++.... .... . ..+..+|.++++|+..++ ++ +++.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~--~-~~~~~~d~~i~~s~~~~~----~~---~~i~~ 348 (568)
T 2vsy_A 287 FDLRGWGGGGRPEVFALRPAPVQ------VNWLAYPGT--SGAP--W-MDYVLGDAFALPPALEPF----YS---EHVLR 348 (568)
T ss_dssp EECSSCTTCSSCHHHHTCCSSEE------EEESSSSSC--CCCT--T-CCEEEECTTTSCTTTGGG----CS---SEEEE
T ss_pred EECCCCCCcchHHHHhcCCCcee------EeeecCCcc--cCCC--C-ceEEEECCCcCCcccccC----Cc---ceeEc
Confidence 98754321 11111211111111 111111000 0000 0 011246778888886543 32 68999
Q ss_pred ecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEe-CC
Q 043412 152 IVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLT-NP 230 (383)
Q Consensus 152 i~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G-~~ 230 (383)
|||.++.....+... ....+.+++ ++++.+ ++++|++.+ ||++.+++++.++.++.|+++|+|+| +|
T Consensus 349 ipn~~~~~~~~~~~~---~~~~r~~~~-------~~~~~~-v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g 416 (568)
T 2vsy_A 349 LQGAFQPSDTSRVVA---EPPSRTQCG-------LPEQGV-VLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPG 416 (568)
T ss_dssp CSSCSCCCCTTCCCC---CCCCTGGGT-------CCTTSC-EEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCST
T ss_pred CCCcCCCCCCCCCCC---CCCCccccC-------CCCCCE-EEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCH
Confidence 999544321111101 011122222 344444 558999999 99999999999998889999999999 55
Q ss_pred CCCCCchHHHHHHHHhhCCCC-C-----------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEE-------cC
Q 043412 231 YHSGRDFGNKIVNFVEDSDLE-K-----------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIA-------TN 291 (383)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~-----------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~-------~~ 291 (383)
+..+.+++.++.+|+. + ++..+|+.||++|+||.+ |+|++++|||+||+|||+ |+
T Consensus 417 -----~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~ 490 (568)
T 2vsy_A 417 -----EADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAAR 490 (568)
T ss_dssp -----THHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGS
T ss_pred -----HHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHH
Confidence 6778888888888775 3 456788999999999999 999999999999999999 99
Q ss_pred CC-------CccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH--HhcC
Q 043412 292 WS-------GPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM--IQRF 362 (383)
Q Consensus 292 ~~-------g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~--~~~~ 362 (383)
.+ |..|++.+ |+++++++|.++++|++.+.+|++++++.+ .+.|
T Consensus 491 ~~~~~l~~~g~~e~v~~---------------------------~~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 491 VAGSLNHHLGLDEMNVA---------------------------DDAAFVAKAVALASDPAALTALHARVDVLRRASGVF 543 (568)
T ss_dssp HHHHHHHHHTCGGGBCS---------------------------SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTT
T ss_pred HHHHHHHHCCChhhhcC---------------------------CHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCC
Confidence 98 88887754 799999999999999999999999999987 5789
Q ss_pred CHHHHHHHHHHHHHHHHhc
Q 043412 363 SPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 363 s~~~~~~~~~~~~~~~~~~ 381 (383)
+|+.+++++.++|++++.+
T Consensus 544 ~~~~~~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 544 HMDGFADDFGALLQALARR 562 (568)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998865
No 17
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.96 E-value=2.9e-29 Score=236.98 Aligned_cols=241 Identities=16% Similarity=0.151 Sum_probs=166.0
Q ss_pred cCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCcccc-----c--cCCCCCC-CCcEE
Q 043412 122 CNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVL-----G--LSNMNTS-SKEFV 192 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l-----~--~~~~~~~-~~~~~ 192 (383)
+..||.|+++|+.+++.+.. ++.++..+ ||||+|.+.|.|...... .....+..+ + ...++++ ++.++
T Consensus 258 a~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~-~k~~aK~klq~~l~~~~~~~l~l~~dk~li 334 (725)
T 3nb0_A 258 AHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQN-LHALKKEKINDFVRGHFHGCFDFDLDNTLY 334 (725)
T ss_dssp HHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHH-HHHHHHHHHHHHHHHHTTTCCCSCGGGEEE
T ss_pred HHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHH-HHHHHHHHHHHHHHhhcccCCCCCCCceeE
Confidence 57899999999999999998 56665543 999999999988521000 000000000 0 0122344 45567
Q ss_pred EEEeeccc-cccCHHHHHHHHHHHhcc-------CCCeEEEEEeCCCCCCC-----------------------------
Q 043412 193 FLSVFKWE-YRKGWDVLLKAYLEEFSK-------ADGVVLYLLTNPYHSGR----------------------------- 235 (383)
Q Consensus 193 i~~~g~~~-~~K~~~~ll~a~~~l~~~-------~~~~~l~i~G~~~~~~~----------------------------- 235 (383)
++.+||++ .+||++.+++|+.+|... ..-+.|+++..+.....
T Consensus 335 ifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~ 414 (725)
T 3nb0_A 335 FFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIF 414 (725)
T ss_dssp EEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHH
Confidence 77789999 689999999999888743 23467777766532100
Q ss_pred -----------------c--------------------------------------hHHHHHHHHhhCCCCC--------
Q 043412 236 -----------------D--------------------------------------FGNKIVNFVEDSDLEK-------- 252 (383)
Q Consensus 236 -----------------~--------------------------------------~~~~~~~~~~~~~~~~-------- 252 (383)
+ ..+.+...++.+++.+
T Consensus 415 ~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKV 494 (725)
T 3nb0_A 415 DHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKM 494 (725)
T ss_dssp HHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEE
T ss_pred HHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeE
Confidence 0 0011111222222211
Q ss_pred ----------------ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC--------Cceeee
Q 043412 253 ----------------PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE--------NGYPLL 308 (383)
Q Consensus 253 ----------------~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~--------~g~~~~ 308 (383)
++..+|+.||++|+||++|+||++++||||||+|||+|+.+|..|++.+. +|++++
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~ 574 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIV 574 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEE
T ss_pred EEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEe
Confidence 23567899999999999999999999999999999999999999988763 566664
Q ss_pred cccccccccCCCCcccccCCCHHHHHHHHHHHh----c-CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Q 043412 309 VGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV----S-NVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILSS 381 (383)
Q Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll----~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~~ 381 (383)
+. ++.++++++++|.+++ . ++..+..|++++++. ++.|||++++++|.++|++++.+
T Consensus 575 ~r---------------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~-A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 575 DR---------------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEAL-SDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp CC---------------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHG-GGGGBHHHHHHHHHHHHHHHHHH
T ss_pred CC---------------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHhh
Confidence 21 1125665555555544 3 677888999998874 67999999999999999998864
No 18
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.96 E-value=4.4e-29 Score=234.70 Aligned_cols=233 Identities=12% Similarity=0.059 Sum_probs=173.9
Q ss_pred HHHHhcCCCCEEEEeChHHHHHHHh-----------------cCCCCCCeEEecCCCcCCCCCCCCCCCCcc-ccCCccc
Q 043412 117 EHVKRCNRMDFVWVPTDFHVSTFIR-----------------SGVDPAKVVKIVQPVHVGFFDPVNCDPIDL-ASIGKPV 178 (383)
Q Consensus 117 ~~~~~~~~ad~vi~~s~~~~~~~~~-----------------~~~~~~~i~vi~ngid~~~~~~~~~~~~~~-~~~~~~~ 178 (383)
.....+..+|.+...+....+.+.+ ++....++.++|||||.+.|.+........ ....+..
T Consensus 172 ~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~ 251 (482)
T 1uqt_A 172 TLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAE 251 (482)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHH
Confidence 3444466789998888776665542 111235789999999988775421110000 0000111
Q ss_pred cccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCC----eEEEEEeCCCCCCCc----hHHHHHHHHhhC--
Q 043412 179 LGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADG----VVLYLLTNPYHSGRD----FGNKIVNFVEDS-- 248 (383)
Q Consensus 179 l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~----~~l~i~G~~~~~~~~----~~~~~~~~~~~~-- 248 (383)
+ .++++|+++||+++.||++.+++|+.++++++|+ ++|+++|++...+.+ +.+++++++...
T Consensus 252 ~--------~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~ 323 (482)
T 1uqt_A 252 L--------KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRING 323 (482)
T ss_dssp T--------TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred h--------CCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhh
Confidence 1 2478999999999999999999999999888774 789999975433333 234455554331
Q ss_pred --------------CC--CCccccccccCceEEecCCCCCCChHHHHHHHcCC-----CEEEcCCCCccccccCCCceee
Q 043412 249 --------------DL--EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL-----PVIATNWSGPTEYLTEENGYPL 307 (383)
Q Consensus 249 --------------~~--~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~-----PvI~~~~~g~~e~v~~~~g~~~ 307 (383)
+. .+++..+|+.||++++||..||||++++||||||+ |+|+|+.+|..+.+. +|+++
T Consensus 324 ~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~--~g~lv 401 (482)
T 1uqt_A 324 KYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT--SALIV 401 (482)
T ss_dssp HHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT--TSEEE
T ss_pred hcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC--CeEEE
Confidence 11 14567899999999999999999999999999997 899999888888773 78888
Q ss_pred ecccccccccCCCCcccccCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 308 LVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSN-VDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 308 ~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
++. |+++++++|.+++++ ++.++++.+++++.+ +.|||+.+++++.+.|+++
T Consensus 402 ~p~------------------d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v-~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPY------------------DRDEVAAALDRALTMSLAERISRHAEMLDVI-VKNDINHWQECFISDLKQI 454 (482)
T ss_dssp CTT------------------CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHS
T ss_pred CCC------------------CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhc
Confidence 877 999999999999984 677889999999986 4599999999999999876
No 19
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.95 E-value=1.3e-27 Score=219.44 Aligned_cols=289 Identities=15% Similarity=0.070 Sum_probs=197.9
Q ss_pred CCChhHHHHHHHHHHHhcccCCCceeeeecCCCcc-cchhhcC------CChhhhhHHHHHHhhhcCCCccEEEecCCCC
Q 043412 7 GGGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ-SLQFWEG------LPHHMRNLAVELYNTECRTNETVVICHSEPG 79 (383)
Q Consensus 7 ~~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~l~~~~~~~~pDiV~~~~~~~ 79 (383)
+.|....+..++++|.+.| .+.+......... ......+ +|. .....+.+++++++||+||++...
T Consensus 49 s~G~~~~~~~L~~~L~~~~---~v~v~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~~l~~~l~~~~pDiv~~~~~~- 121 (374)
T 2xci_A 49 SIGEFNTFLPILKELKREH---RILLTYFSPRAREYLKTKSDFYDCLHPLPL---DNPFSVKRFEELSKPKALIVVERE- 121 (374)
T ss_dssp SHHHHHHHHHHHHHHHHHS---CEEEEESCGGGHHHHHTTGGGCSEEEECCC---SSHHHHHHHHHHHCCSEEEEESCC-
T ss_pred CHHHHHHHHHHHHHHHhcC---CEEEEEcCCcHHHHHHHhcccccceeECCC---CCHHHHHHHHHHhCCCEEEEECcc-
Confidence 5577889999999999987 2223322111110 0000011 332 234667788889999999986321
Q ss_pred CCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCC
Q 043412 80 AWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVG 159 (383)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~ 159 (383)
.|. ..+.....+ . ....++ . .....+...++++|.++++|+..++.+.++|++ ++.+++|+.
T Consensus 122 ~~~-~~~~~~~~p-~------~~~~~~-~----~~~~~~~~~~~~~d~ii~~S~~~~~~l~~~g~~--ki~vi~n~~--- 183 (374)
T 2xci_A 122 FWP-SLIIFTKVP-K------ILVNAY-A----KGSLIEKILSKKFDLIIMRTQEDVEKFKTFGAK--RVFSCGNLK--- 183 (374)
T ss_dssp CCH-HHHHHCCSC-E------EEEEEC-C----CCCHHHHHHHTTCSEEEESCHHHHHHHHTTTCC--SEEECCCGG---
T ss_pred CcH-HHHHHHhCC-E------EEEEee-c----CchHHHHHHHHhCCEEEECCHHHHHHHHHcCCC--eEEEcCCCc---
Confidence 222 122111111 1 011111 0 011234455789999999999999999998886 899999973
Q ss_pred CCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHH
Q 043412 160 FFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGN 239 (383)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~ 239 (383)
|.+..... . .+ ..+++++.|+ ..||.+.+++|++++.++.|+++|+|+|+++ +..+
T Consensus 184 -f~~~~~~~------~--~l---------~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~----~~~~ 239 (374)
T 2xci_A 184 -FICQKGKG------I--KL---------KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHI----ENAK 239 (374)
T ss_dssp -GCCCCCSC------C--CC---------SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSG----GGHH
T ss_pred -cCCCcChh------h--hh---------cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCH----HHHH
Confidence 21111100 0 01 1245666665 4589999999999999889999999999872 2235
Q ss_pred HHHHHHhhCCCC-----------------CccccccccCceEEecCC-CCCCChHHHHHHHcCCCEEEc-CCCCcccccc
Q 043412 240 KIVNFVEDSDLE-----------------KPDDGWAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIAT-NWSGPTEYLT 300 (383)
Q Consensus 240 ~~~~~~~~~~~~-----------------~~v~~~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~-~~~g~~e~v~ 300 (383)
.++++++++++. +++..+|+.||++++||. .|++|++++|||+||+|||++ +.++..|++.
T Consensus 240 ~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~ 319 (374)
T 2xci_A 240 IFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKE 319 (374)
T ss_dssp HHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHH
T ss_pred HHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHH
Confidence 777787776653 677899999999888764 477899999999999999975 6688899886
Q ss_pred C--CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCC
Q 043412 301 E--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 301 ~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s 363 (383)
+ .+|++++++ |+++|+++|.++++| +.+++|++++++.+.++++
T Consensus 320 ~~~~~G~l~~~~------------------d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 320 FLEKEGAGFEVK------------------NETELVTKLTELLSV-KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp HHHHTTCEEECC------------------SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEeC------------------CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHhccc
Confidence 5 367777766 999999999999999 9999999999998766443
No 20
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.95 E-value=3.4e-27 Score=197.81 Aligned_cols=182 Identities=17% Similarity=0.208 Sum_probs=144.9
Q ss_pred ecCCCcCCCCC--CCCCCCC--ccccCCccccccCCCCCCCCcEEEEEeeccc-cccCHHHHHHHHHHHh--ccCCCeEE
Q 043412 152 IVQPVHVGFFD--PVNCDPI--DLASIGKPVLGLSNMNTSSKEFVFLSVFKWE-YRKGWDVLLKAYLEEF--SKADGVVL 224 (383)
Q Consensus 152 i~ngid~~~~~--~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~--~~~~~~~l 224 (383)
||||+|.+.|. +...... ....+.++++ ++..+++++|++. +.||++.+++++..+. ++.++++|
T Consensus 2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~--------~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l 73 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGM--------DEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRF 73 (200)
T ss_dssp ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTC--------CSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEE
T ss_pred CCCccChhhccccccccchhhHHHHHHHHcCC--------CCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEE
Confidence 79999999887 6542000 0111122222 2455899999999 9999999999999997 77899999
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhC-------CCCC--ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDS-------DLEK--PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~-------~~~~--~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+++|+++ +...+.++++++.+ |..+ ++..+|+.||++++||..|++|++++|||+||+|||+++.++.
T Consensus 74 ~i~G~~~---~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 150 (200)
T 2bfw_A 74 IIIGKGD---PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGL 150 (200)
T ss_dssp EEECCBC---HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCHHH
T ss_pred EEECCCC---hHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEeCCCCh
Confidence 9999872 12667777776653 3333 6778999999999999999999999999999999999999999
Q ss_pred cccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhcCC
Q 043412 296 TEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS-NVDEAKAKGKQAREDMIQRFS 363 (383)
Q Consensus 296 ~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~~~s 363 (383)
.+++...+|++++++ |+++++++|.++++ |++.+.+|++++++.+.+ ||
T Consensus 151 ~e~~~~~~g~~~~~~------------------~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 151 RDIITNETGILVKAG------------------DPGELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp HHHCCTTTCEEECTT------------------CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred HHHcCCCceEEecCC------------------CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 999933488888776 99999999999999 999999999999998776 76
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.95 E-value=1.2e-27 Score=219.35 Aligned_cols=300 Identities=11% Similarity=-0.060 Sum_probs=200.0
Q ss_pred CChhHHHHHHHHHHHhcccCCCceeeeecCCCcc---c---chh--h--cCCC-----------hhhhhHHHHHHhhhcC
Q 043412 8 GGYSSESWSYILALNEHVKNPRFKLAIEHHGDLQ---S---LQF--W--EGLP-----------HHMRNLAVELYNTECR 66 (383)
Q Consensus 8 ~G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~---~---~~~--~--~~~~-----------~~~~~~~~~l~~~~~~ 66 (383)
||....+..++++|.+.|+...+ .....+... . ... + ..++ .........+.+++++
T Consensus 17 gG~~~~~~~la~~L~~~G~~V~v--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 94 (364)
T 1f0k_A 17 GGHVFPGLAVAHHLMAQGWQVRW--LGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKA 94 (364)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEE--EECTTSTHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHcCCEEEE--EecCCcchhhhccccCCceEEecCCccCcCccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46666677999999999875443 222221100 0 000 0 0011 0112234567778888
Q ss_pred CCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHHHHHHHhcCCCC
Q 043412 67 TNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFHVSTFIRSGVDP 146 (383)
Q Consensus 67 ~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~~~ 146 (383)
.+||+||+|+....+...........+. ....++.. .........+.+|.+++.++.. ++
T Consensus 95 ~~pDvv~~~~~~~~~~~~~~~~~~~~p~-----v~~~~~~~------~~~~~~~~~~~~d~v~~~~~~~--------~~- 154 (364)
T 1f0k_A 95 YKPDVVLGMGGYVSGPGGLAAWSLGIPV-----VLHEQNGI------AGLTNKWLAKIATKVMQAFPGA--------FP- 154 (364)
T ss_dssp HCCSEEEECSSTTHHHHHHHHHHTTCCE-----EEEECSSS------CCHHHHHHTTTCSEEEESSTTS--------SS-
T ss_pred cCCCEEEEeCCcCchHHHHHHHHcCCCE-----EEEecCCC------CcHHHHHHHHhCCEEEecChhh--------cC-
Confidence 8999999996543221111111111111 11111110 0111222357899999988754 23
Q ss_pred CCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCC-cEEEEEeeccccccCHHHHHHHHHHHhccCCCeE-E
Q 043412 147 AKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSK-EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVV-L 224 (383)
Q Consensus 147 ~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~-l 224 (383)
++.+++||+|.+.+.+... +.++++ +++ ..++++.|++.+.|+.+.+++|+..+.+ +++ +
T Consensus 155 -~~~~i~n~v~~~~~~~~~~-------~~~~~~-------~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l 216 (364)
T 1f0k_A 155 -NAEVVGNPVRTDVLALPLP-------QQRLAG-------REGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIW 216 (364)
T ss_dssp -SCEECCCCCCHHHHTSCCH-------HHHHTT-------CCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEE
T ss_pred -CceEeCCccchhhcccchh-------hhhccc-------CCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEE
Confidence 6889999999876544211 011111 233 4466677799999999999999998854 678 5
Q ss_pred EEEeCCCCCCCchHHHHHHHHhhCCC--------CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc
Q 043412 225 YLLTNPYHSGRDFGNKIVNFVEDSDL--------EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT 296 (383)
Q Consensus 225 ~i~G~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~ 296 (383)
+++|++ + .+.+++.++++++ .+++..+|+.||++|+||. |++++|||+||+|||+++.+|..
T Consensus 217 ~i~G~~-----~-~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~~sg----~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 217 HQSGKG-----S-QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSG----ALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp EECCTT-----C-HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCC----HHHHHHHHHHTCCEEECCCCCTT
T ss_pred EEcCCc-----h-HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEECCc----hHHHHHHHHhCCCEEEeeCCCCc
Confidence 667876 2 3566666666543 3677899999999999983 89999999999999999998764
Q ss_pred --------ccccCCCceeeecccccccccCCCCcccccCCC--HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHH
Q 043412 297 --------EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPS--VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPET 366 (383)
Q Consensus 297 --------e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~ 366 (383)
+++++++|++++++ | +++++++|.++ |++.+++|++++++. .+.|+|+.
T Consensus 287 ~~q~~~~~~~~~~g~g~~~~~~------------------d~~~~~la~~i~~l--~~~~~~~~~~~~~~~-~~~~~~~~ 345 (364)
T 1f0k_A 287 RQQYWNALPLEKAGAAKIIEQP------------------QLSVDAVANTLAGW--SRETLLTMAERARAA-SIPDATER 345 (364)
T ss_dssp CHHHHHHHHHHHTTSEEECCGG------------------GCCHHHHHHHHHTC--CHHHHHHHHHHHHHT-CCTTHHHH
T ss_pred hhHHHHHHHHHhCCcEEEeccc------------------cCCHHHHHHHHHhc--CHHHHHHHHHHHHHh-hccCHHHH
Confidence 46666778888765 6 99999999998 999999999999986 46899999
Q ss_pred HHHHHHHHHHHH
Q 043412 367 VAGIVTDHIKDI 378 (383)
Q Consensus 367 ~~~~~~~~~~~~ 378 (383)
+++++.++|++.
T Consensus 346 ~~~~~~~~y~~~ 357 (364)
T 1f0k_A 346 VANEVSRVARAL 357 (364)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
No 22
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.95 E-value=6.5e-29 Score=228.80 Aligned_cols=276 Identities=12% Similarity=0.105 Sum_probs=189.1
Q ss_pred HHHHHHhhhcCCCccEEEecCCCC-CCCCccccc-CCCCCCCCCCCcccccceeeeec-CCCCHHHHHh-c-CCCCEEEE
Q 043412 56 LAVELYNTECRTNETVVICHSEPG-AWYPPLFDT-LPCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR-C-NRMDFVWV 130 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~ad~vi~ 130 (383)
....+.+++++++||+||+|+... .+....... ...+.+ ...++...+.. ..+...+.+. + +.+|.+++
T Consensus 83 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 156 (375)
T 3beo_A 83 GLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIPVG------HVEAGLRTWDKYSPYPEEMNRQLTGVMADLHFS 156 (375)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCCEE------EESCCCCCSCTTSSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEE------EEecccccccccCCChhHhhhhHHhhhhheeeC
Confidence 345678888899999999986421 111111111 112222 11111100110 1222333332 3 44999999
Q ss_pred eChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccc-cCHHHH
Q 043412 131 PTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR-KGWDVL 208 (383)
Q Consensus 131 ~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~-K~~~~l 208 (383)
+|+..++.+.+.|++++++.+++|| +|...+.+........ +.+ + +++.++++++|++.+. ||++.+
T Consensus 157 ~s~~~~~~~~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~--~~~--~-------~~~~~vl~~~gr~~~~~K~~~~l 225 (375)
T 3beo_A 157 PTAKSATNLQKENKDESRIFITGNTAIDALKTTVKETYSHPV--LEK--L-------GNNRLVLMTAHRRENLGEPMRNM 225 (375)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHCCSSCCCHH--HHT--T-------TTSEEEEEECCCGGGTTHHHHHH
T ss_pred CCHHHHHHHHHcCCCcccEEEECChhHhhhhhhhhhhhhHHH--HHh--c-------cCCCeEEEEecccccchhHHHHH
Confidence 9999999999888888899999999 7865543322110000 000 0 2456788899998875 999999
Q ss_pred HHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC-----C--CccccccccCceEEecCCCCCCChHHHHH
Q 043412 209 LKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL-----E--KPDDGWAPAADVFVLPSRGEGWGRPLVEA 280 (383)
Q Consensus 209 l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~-----~--~~v~~~~~~adi~v~ps~~e~~~~~~~Ea 280 (383)
++|+.++.++.|++++++ |.++ +..+.+.+++++... ++ . .++..+|+.||++|+|| |.+++||
T Consensus 226 i~a~~~l~~~~~~~~~i~-~~g~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA 297 (375)
T 3beo_A 226 FRAIKRLVDKHEDVQVVY-PVHM--NPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-----GGVQEEA 297 (375)
T ss_dssp HHHHHHHHHHCTTEEEEE-ECCS--CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-----HHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEE-eCCC--CHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-----CChHHHH
Confidence 999999988888999665 5442 122344555543311 11 1 25668899999999999 6679999
Q ss_pred HHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 043412 281 MSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMI 359 (383)
Q Consensus 281 ~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 359 (383)
|+||+|||+++. ++..|++++++|++++. |+++++++|.++++|++.+++|++++++. .
T Consensus 298 ~a~G~Pvi~~~~~~~~~e~v~~g~g~~v~~-------------------d~~~la~~i~~ll~~~~~~~~~~~~~~~~-~ 357 (375)
T 3beo_A 298 PSLGVPVLVLRDTTERPEGIEAGTLKLAGT-------------------DEETIFSLADELLSDKEAHDKMSKASNPY-G 357 (375)
T ss_dssp HHHTCCEEECSSCCSCHHHHHTTSEEECCS-------------------CHHHHHHHHHHHHHCHHHHHHHCCCCCTT-C
T ss_pred HhcCCCEEEecCCCCCceeecCCceEEcCC-------------------CHHHHHHHHHHHHhChHhHhhhhhcCCCC-C
Confidence 999999999965 88999988878777753 89999999999999999999999998875 4
Q ss_pred hcCCHHHHHHHHHHHHH
Q 043412 360 QRFSPETVAGIVTDHIK 376 (383)
Q Consensus 360 ~~~s~~~~~~~~~~~~~ 376 (383)
+.|+|+.+++.+.++++
T Consensus 358 ~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 358 DGRASERIVEAILKHFN 374 (375)
T ss_dssp CSCHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHHhh
Confidence 68999999998887653
No 23
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.94 E-value=7e-29 Score=229.38 Aligned_cols=284 Identities=11% Similarity=0.077 Sum_probs=193.7
Q ss_pred HHHHHHhhhcCCCccEEEecCC-CCCCCCcccccC-CCCCCCCCCCcccccceeeeec-CCCCHHHHHh--cCCCCEEEE
Q 043412 56 LAVELYNTECRTNETVVICHSE-PGAWYPPLFDTL-PCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR--CNRMDFVWV 130 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~ad~vi~ 130 (383)
....+.+++++.+||+||+|+. ...+...+.... ..+.+ ...++...+.. ..+.....+. .+.+|.+++
T Consensus 74 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 147 (384)
T 1vgv_A 74 ILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVG------HVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFS 147 (384)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEE------EESCCCCCSCTTSSTTHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEE------EEecccccccccCCCchHhhHHHHHhhccEEEc
Confidence 3567888889999999999964 222221121111 11211 11121111111 1223333333 366999999
Q ss_pred eChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCC-C--ccccCCccc-cccCCCCCCCCcEEEEEeeccccc-cC
Q 043412 131 PTDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDP-I--DLASIGKPV-LGLSNMNTSSKEFVFLSVFKWEYR-KG 204 (383)
Q Consensus 131 ~s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~-~--~~~~~~~~~-l~~~~~~~~~~~~~i~~~g~~~~~-K~ 204 (383)
+|+..++.+.++|++++++.+++||+ |...+.+..... . ....+.+++ +. +++.++++++||+.+. ||
T Consensus 148 ~s~~~~~~l~~~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vl~~~gr~~~~~kg 221 (384)
T 1vgv_A 148 PTETSRQNLLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFID------PDKKMILVTGHRRESFGRG 221 (384)
T ss_dssp SSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCC------TTSEEEEEECCCBSSCCHH
T ss_pred CcHHHHHHHHHcCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccC------CCCCEEEEEeCCccccchH
Confidence 99999999988898888999999994 432221110000 0 000011111 21 2345788999999876 99
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC---------CCCCccccccccCceEEecCCCCCCCh
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS---------DLEKPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
++.+++|+.++.++.|++++++.++. .....+.+++++... +. +++..+|+.||++|+|| |.
T Consensus 222 ~~~li~a~~~l~~~~~~~~l~i~~g~---~~~~~~~l~~~~~~~~~v~~~g~~~~-~~~~~~~~~ad~~v~~S-----g~ 292 (384)
T 1vgv_A 222 FEEICHALADIATTHQDIQIVYPVHL---NPNVREPVNRILGHVKNVILIDPQEY-LPFVWLMNHAWLILTDS-----GG 292 (384)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEECCB---CHHHHHHHHHHHTTCTTEEEECCCCH-HHHHHHHHHCSEEEESS-----ST
T ss_pred HHHHHHHHHHHHhhCCCeEEEEEcCC---CHHHHHHHHHHhhcCCCEEEeCCCCH-HHHHHHHHhCcEEEECC-----cc
Confidence 99999999999888899999886432 112456666654321 11 45678899999999999 34
Q ss_pred HHHHHHHcCCCEEEcCC-CCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIATNW-SGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~-~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
+++|||+||+|||+++. ++..|++.+++|+++++ |+++++++|.++++|++.+++|++++
T Consensus 293 ~~lEA~a~G~PvI~~~~~~~~~e~v~~g~g~lv~~-------------------d~~~la~~i~~ll~d~~~~~~~~~~~ 353 (384)
T 1vgv_A 293 IQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGT-------------------DKQRIVEEVTRLLKDENEYQAMSRAH 353 (384)
T ss_dssp GGGTGGGGTCCEEEESSCCSCHHHHHHTSEEEECS-------------------SHHHHHHHHHHHHHCHHHHHHHHSSC
T ss_pred hHHHHHHcCCCEEEccCCCCcchhhhCCceEEeCC-------------------CHHHHHHHHHHHHhChHHHhhhhhcc
Confidence 58999999999999987 88899887778877753 89999999999999999999999998
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 355 REDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
++. .+.|+|+.+++.+.++|+++.+
T Consensus 354 ~~~-~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 354 NPY-GDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp CTT-CCSCHHHHHHHHHHHTCCCC--
T ss_pred CCC-cCCCHHHHHHHHHHHHHHhhcc
Confidence 875 5789999999999888776543
No 24
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.94 E-value=9.5e-27 Score=189.08 Aligned_cols=155 Identities=19% Similarity=0.161 Sum_probs=128.1
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccC
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAA 261 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~a 261 (383)
+++|+++|++.++||++.+++|+..+. +.++++|+++|+| +..+.++++++.+++. +++..+|+.|
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~-~~~~~~l~i~G~g-----~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK-YKQDIVLLLKGKG-----PDEKKIKLLAQKLGVKAEFGFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT-TGGGEEEEEECCS-----TTHHHHHHHHHHHTCEEECCCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc-cCCCeEEEEEeCC-----ccHHHHHHHHHHcCCeEEEeecCHHHHHHHHHhC
Confidence 578999999999999999999999874 4589999999987 4467777777766542 5577899999
Q ss_pred ceEEecCCCCCCChHHHHHHHcCC-CEEE-cCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGL-PVIA-TNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~-PvI~-~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
|++++||..|+||++++|||+||+ |||+ ++.++..+++.++ +.+++++ |+++++++|.+
T Consensus 76 dv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~-~~~~~~~------------------~~~~l~~~i~~ 136 (166)
T 3qhp_A 76 TLYVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE-RSLFEPN------------------NAKDLSAKIDW 136 (166)
T ss_dssp SEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSG-GGEECTT------------------CHHHHHHHHHH
T ss_pred CEEEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCC-ceEEcCC------------------CHHHHHHHHHH
Confidence 999999999999999999999998 9999 5578888888775 2355544 99999999999
Q ss_pred HhcCHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQAREDMIQRFSPETVAGI 370 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 370 (383)
+++|++.+++|++++++.+ ++|||+.++++
T Consensus 137 l~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 137 WLENKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp HHHCHHHHHHHHHHHHHHH-HHHC-------
T ss_pred HHhCHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 9999999999999999976 88999998764
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.94 E-value=4.4e-26 Score=211.84 Aligned_cols=279 Identities=10% Similarity=0.011 Sum_probs=191.9
Q ss_pred CccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCC--CCHHHHHhcCCCCEEEEeChHHHHHHHh----
Q 043412 68 NETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDR--VSPEHVKRCNRMDFVWVPTDFHVSTFIR---- 141 (383)
Q Consensus 68 ~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ad~vi~~s~~~~~~~~~---- 141 (383)
.-|+|.+|+.....++.++.........++......-...+|..-. +...+.+.+-.+|.|.+.+....+.|.+
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r 228 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVAD 228 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHH
Confidence 4689999987665555444432211110110000001111221111 2355666689999999999988877543
Q ss_pred -c-CCC-------------CCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHH
Q 043412 142 -S-GVD-------------PAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWD 206 (383)
Q Consensus 142 -~-~~~-------------~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~ 206 (383)
. |.+ ..++.++|+|||++.|.+..... .. .-+..+ .++.+|+++||+++.||++
T Consensus 229 ~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~-~~--~lr~~~--------~~~~lIl~VgRLd~~KGi~ 297 (496)
T 3t5t_A 229 LLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQL-PE--GIEEWA--------DGHRLVVHSGRTDPIKNAE 297 (496)
T ss_dssp HCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCC-CT--THHHHH--------TTSEEEEEEEESSGGGCHH
T ss_pred HhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHH-HH--HHHHHh--------CCceEEEEcccCccccCHH
Confidence 2 321 12678999999999987654311 11 111111 2578999999999999999
Q ss_pred HHHHHHHHHhccCCC---eEEEEEeCCCCCCCch----HHHHHHHHhhCC-------C-------CCccccccccCceEE
Q 043412 207 VLLKAYLEEFSKADG---VVLYLLTNPYHSGRDF----GNKIVNFVEDSD-------L-------EKPDDGWAPAADVFV 265 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~---~~l~i~G~~~~~~~~~----~~~~~~~~~~~~-------~-------~~~v~~~~~~adi~v 265 (383)
.+++|+ ++++++|+ +.|+++|.+..++.+. ..++++++...+ + .+++..+|+.||+++
T Consensus 298 ~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~v 376 (496)
T 3t5t_A 298 RAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLI 376 (496)
T ss_dssp HHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEE
T ss_pred HHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEE
Confidence 999999 99888886 5688887654333333 344444443321 1 145678999999999
Q ss_pred ecCCCCCCChHHHHHHHcC---CCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhc
Q 043412 266 LPSRGEGWGRPLVEAMSMG---LPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVS 342 (383)
Q Consensus 266 ~ps~~e~~~~~~~Ea~a~G---~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~ 342 (383)
+||..||||++.+|||||| .|+|+|..+|..+.+. ++|++|++. |+++++++|.++++
T Consensus 377 v~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-~~allVnP~------------------D~~~lA~AI~~aL~ 437 (496)
T 3t5t_A 377 FNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG-EYCRSVNPF------------------DLVEQAEAISAALA 437 (496)
T ss_dssp ECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-GGSEEECTT------------------BHHHHHHHHHHHHH
T ss_pred ECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-CCEEEECCC------------------CHHHHHHHHHHHHc
Confidence 9999999999999999997 8999999998888874 357777776 99999999999998
Q ss_pred CH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q 043412 343 NV-DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 343 ~~-~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
++ +.++++.++.+++ ...++...+++.+.+.++..
T Consensus 438 m~~~er~~r~~~~~~~-V~~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 438 AGPRQRAEAAARRRDA-ARPWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCBHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHhhc
Confidence 64 6788888888887 47899999999999888765
No 26
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.94 E-value=5.4e-28 Score=224.59 Aligned_cols=195 Identities=11% Similarity=0.045 Sum_probs=150.3
Q ss_pred HHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
...++++|.++++|+..++.+.+.+ ++.+||||+|.+.|.+..... .++.++++++|+
T Consensus 173 ~~~~~~ad~vi~~S~~~~~~~~~~~----~i~vipngvd~~~f~~~~~~~------------------~~~~~~i~~vGr 230 (406)
T 2hy7_A 173 DRVAPTLDVIALVSPAMAAEVVSRD----NVFHVGHGVDHNLDQLGDPSP------------------YAEGIHAVAVGS 230 (406)
T ss_dssp HHHGGGCSEEEESCGGGGGGCSCST----TEEECCCCBCTTHHHHHCSCS------------------CCSSEEEEEECC
T ss_pred HHHHHhCCEEEEcCHHHHHHHHhcC----CEEEEcCCcChHhcCcccccc------------------cCCCcEEEEEec
Confidence 3447899999999999999887655 899999999988775432210 123478999999
Q ss_pred cccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCCCCCChH
Q 043412 199 WEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRGEGWGRP 276 (383)
Q Consensus 199 ~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~e~~~~~ 276 (383)
+.+.||+ +..+.++.|+++|+|+|+|+. ....+.+.+..+|.. +++..+|+.||++++||..|++|++
T Consensus 231 l~~~Kg~------~~~l~~~~~~~~l~ivG~g~~----~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~ 300 (406)
T 2hy7_A 231 MLFDPEF------FVVASKAFPQVTFHVIGSGMG----RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVY 300 (406)
T ss_dssp TTBCHHH------HHHHHHHCTTEEEEEESCSSC----CCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTT
T ss_pred cccccCH------HHHHHHhCCCeEEEEEeCchH----HhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchH
Confidence 9999998 334444578999999998730 000111222333433 4677899999999999999999999
Q ss_pred HHHHH-------HcCCCEEEcCCCCccccccCCCcee-eecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 277 LVEAM-------SMGLPVIATNWSGPTEYLTEENGYP-LLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 277 ~~Ea~-------a~G~PvI~~~~~g~~e~v~~~~g~~-~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
++||| +||+|||+|+. +....+|++ ++++ |+++++++|.++++|++
T Consensus 301 ~lEAm~Kl~eYla~G~PVIas~~-----v~~~~~G~l~v~~~------------------d~~~la~ai~~ll~~~~--- 354 (406)
T 2hy7_A 301 LADSSMKLLQYDFFGLPAVCPNA-----VVGPYKSRFGYTPG------------------NADSVIAAITQALEAPR--- 354 (406)
T ss_dssp HHHHCHHHHHHHHHTCCEEEEGG-----GTCSCSSEEEECTT------------------CHHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHHHHHhhCCCcEEEehh-----cccCcceEEEeCCC------------------CHHHHHHHHHHHHhCcc---
Confidence 99999 99999999987 333347877 7776 99999999999999887
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHH--HHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIVTDH--IKDI 378 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~~~~--~~~~ 378 (383)
+ ...++|+|+.+++++.++ |+++
T Consensus 355 ------~-~~~~~~sw~~~a~~~~~~~~y~~~ 379 (406)
T 2hy7_A 355 ------V-RYRQCLNWSDTTDRVLDPRAYPET 379 (406)
T ss_dssp ------C-CCSCCCBHHHHHHHHHCGGGSGGG
T ss_pred ------h-hhhhcCCHHHHHHHHHHhhccccc
Confidence 1 235789999999999998 7654
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.91 E-value=3.7e-25 Score=203.85 Aligned_cols=271 Identities=12% Similarity=0.066 Sum_probs=181.9
Q ss_pred HHHHHHhhhcCCCccEEEecCCCCC-CCCcccccC-CCCCCCCCCCcccccceeeeec-CCCCHHHHHh--cCCCCEEEE
Q 043412 56 LAVELYNTECRTNETVVICHSEPGA-WYPPLFDTL-PCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR--CNRMDFVWV 130 (383)
Q Consensus 56 ~~~~l~~~~~~~~pDiV~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~ad~vi~ 130 (383)
....+.+++++++||+||+|..... +........ ..+.+ ....+...+.. ..+.....+. .+.+|.+++
T Consensus 79 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (376)
T 1v4v_A 79 ILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVG------HVEAGLRSGNLKEPFPEEANRRLTDVLTDLDFA 152 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEE------EETCCCCCSCTTSSTTHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEE------EEeCCCccccccCCCchHHHHHHHHHHhceeeC
Confidence 3456788888999999999964321 211111111 11111 11111100110 1122222222 356899999
Q ss_pred eChHHHHHHHhcCCCCCCeEEecCCC-cCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHH
Q 043412 131 PTDFHVSTFIRSGVDPAKVVKIVQPV-HVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLL 209 (383)
Q Consensus 131 ~s~~~~~~~~~~~~~~~~i~vi~ngi-d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll 209 (383)
+|+..++.+.+.|++++++.+++|++ |...+.+... .. +.+ + .++.++++++||+...||++.++
T Consensus 153 ~s~~~~~~l~~~g~~~~ki~vi~n~~~d~~~~~~~~~-~~----~~~--~-------~~~~~vl~~~gr~~~~k~~~~ll 218 (376)
T 1v4v_A 153 PTPLAKANLLKEGKREEGILVTGQTGVDAVLLAAKLG-RL----PEG--L-------PEGPYVTVTMHRRENWPLLSDLA 218 (376)
T ss_dssp SSHHHHHHHHTTTCCGGGEEECCCHHHHHHHHHHHHC-CC----CTT--C-------CSSCEEEECCCCGGGGGGHHHHH
T ss_pred CCHHHHHHHHHcCCCcceEEEECCchHHHHhhhhhhh-HH----HHh--c-------CCCCEEEEEeCcccchHHHHHHH
Confidence 99999999999898888999999964 4322111100 00 000 1 23467788899998888999999
Q ss_pred HHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhC---------CCCCccccccccCceEEecCCCCCCChHHHH
Q 043412 210 KAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDS---------DLEKPDDGWAPAADVFVLPSRGEGWGRPLVE 279 (383)
Q Consensus 210 ~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~adi~v~ps~~e~~~~~~~E 279 (383)
+|+.++.++.|++++++. |++ ....+.+++++... +. .++..+|+.||++|.|| + |+ ++|
T Consensus 219 ~a~~~l~~~~~~~~lv~~~g~~----~~~~~~l~~~~~~~~~v~~~g~~g~-~~~~~~~~~ad~~v~~S--~--g~-~lE 288 (376)
T 1v4v_A 219 QALKRVAEAFPHLTFVYPVHLN----PVVREAVFPVLKGVRNFVLLDPLEY-GSMAALMRASLLLVTDS--G--GL-QEE 288 (376)
T ss_dssp HHHHHHHHHCTTSEEEEECCSC----HHHHHHHHHHHTTCTTEEEECCCCH-HHHHHHHHTEEEEEESC--H--HH-HHH
T ss_pred HHHHHHHhhCCCeEEEEECCCC----HHHHHHHHHHhccCCCEEEECCCCH-HHHHHHHHhCcEEEECC--c--CH-HHH
Confidence 999999888889998886 544 12456666665321 11 24568889999999999 3 34 889
Q ss_pred HHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 043412 280 AMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDM 358 (383)
Q Consensus 280 a~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 358 (383)
||+||+|||++ +.++..+++++++|++++ . |+++++++|.++++|++.+++|+++
T Consensus 289 A~a~G~PvI~~~~~~~~~~~~~~g~g~lv~-~------------------d~~~la~~i~~ll~d~~~~~~~~~~----- 344 (376)
T 1v4v_A 289 GAALGVPVVVLRNVTERPEGLKAGILKLAG-T------------------DPEGVYRVVKGLLENPEELSRMRKA----- 344 (376)
T ss_dssp HHHTTCCEEECSSSCSCHHHHHHTSEEECC-S------------------CHHHHHHHHHHHHTCHHHHHHHHHS-----
T ss_pred HHHcCCCEEeccCCCcchhhhcCCceEECC-C------------------CHHHHHHHHHHHHhChHhhhhhccc-----
Confidence 99999999987 458888887767777774 2 8999999999999999999999864
Q ss_pred HhcCCHHHHHHHHHHHHHHHHh
Q 043412 359 IQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 359 ~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
.+.|++...++++.+.+.+++.
T Consensus 345 ~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 345 KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp CCSSCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCCChHHHHHHHHHHHHhc
Confidence 3557777777888888877654
No 28
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.89 E-value=1.7e-23 Score=171.55 Aligned_cols=140 Identities=21% Similarity=0.227 Sum_probs=115.7
Q ss_pred CCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHh--hCCC---------C--C
Q 043412 186 TSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVE--DSDL---------E--K 252 (383)
Q Consensus 186 ~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~--~~~~---------~--~ 252 (383)
+++++++|+++|++.+.||++.+++++..+ ++++|+++|++.. .+.++++++ .+++ . +
T Consensus 19 ~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~-----~~~l~~~~~~~~~~l~~~v~~~g~~~~~ 89 (177)
T 2f9f_A 19 FKCYGDFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSK-----GDHAERYARKIMKIAPDNVKFLGSVSEE 89 (177)
T ss_dssp CCCCCSCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCT-----TSTHHHHHHHHHHHSCTTEEEEESCCHH
T ss_pred cCCCCCEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCcc-----HHHHHHHHHhhhcccCCcEEEeCCCCHH
Confidence 356788899999999999999999999886 6899999998743 234555554 3333 2 3
Q ss_pred ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCC-CceeeecccccccccCCCCcccccCCCHH
Q 043412 253 PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVD 331 (383)
Q Consensus 253 ~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 331 (383)
++..+|+.||++++||..|++|++++|||+||+|||+++.++..+++.++ +|+++ .. |++
T Consensus 90 e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~------------------d~~ 150 (177)
T 2f9f_A 90 ELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NA------------------DVN 150 (177)
T ss_dssp HHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CS------------------CHH
T ss_pred HHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CC------------------CHH
Confidence 36789999999999999999999999999999999999999999999875 78777 55 999
Q ss_pred HHHHHHHHHhcCHHH-HHHHHHH
Q 043412 332 KLRALMRLVVSNVDE-AKAKGKQ 353 (383)
Q Consensus 332 ~la~~i~~ll~~~~~-~~~~~~~ 353 (383)
+++++|.++++|++. ++++.++
T Consensus 151 ~l~~~i~~l~~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 151 EIIDAMKKVSKNPDKFKKDCFRR 173 (177)
T ss_dssp HHHHHHHHHHHCTTTTHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHH
Confidence 999999999998875 4444443
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.81 E-value=1.9e-21 Score=179.53 Aligned_cols=280 Identities=11% Similarity=0.157 Sum_probs=178.0
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeec-CCCCHHHHHhc--CCCCEEE
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKRC--NRMDFVW 129 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~ad~vi 129 (383)
...+..+.+++++++||+||+|......++ ...+.....++ .....+...|.. ..++....+.+ +.+|.++
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv-----~h~~ag~rs~~~~~~~~~~~~r~~~~~~a~~~~ 171 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPV-----GHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHF 171 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCE-----EEETCCCCCSCTTSSTTHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCE-----EEEECCccccccccCCcHHHHHHHHHHhcCEEE
Confidence 456677888999999999999975443222 22222211111 111111111221 23444455443 6789999
Q ss_pred EeChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCC-CCC--ccccCCccc-cccCCCCCCCCcEEEEEeeccc-ccc
Q 043412 130 VPTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNC-DPI--DLASIGKPV-LGLSNMNTSSKEFVFLSVFKWE-YRK 203 (383)
Q Consensus 130 ~~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~-~~~--~~~~~~~~~-l~~~~~~~~~~~~~i~~~g~~~-~~K 203 (383)
++|+..++.+.+.|++++++.+++|+ +|...+.+... ... ....+.+++ +. +++.+++++.+|.. ..|
T Consensus 172 ~~se~~~~~l~~~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~------~~~~~vlv~~hR~~~~~~ 245 (396)
T 3dzc_A 172 APTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLD------ASKKLILVTGHRRESFGG 245 (396)
T ss_dssp ESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCC------TTSEEEEEECSCBCCCTT
T ss_pred CCCHHHHHHHHHcCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccC------CCCCEEEEEECCcccchh
Confidence 99999999999999998899999995 44322211100 000 000011222 11 23455566665643 347
Q ss_pred CHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC-----C--CccccccccCceEEecCCCCCCCh
Q 043412 204 GWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL-----E--KPDDGWAPAADVFVLPSRGEGWGR 275 (383)
Q Consensus 204 ~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~-----~--~~v~~~~~~adi~v~ps~~e~~~~ 275 (383)
+++.+++|+.++.+++|++++++.++. ++...+.++++.... ++ . .++..+|+.||++|.+| | |+
T Consensus 246 ~~~~ll~A~~~l~~~~~~~~~v~~~g~---~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S---G-g~ 318 (396)
T 3dzc_A 246 GFERICQALITTAEQHPECQILYPVHL---NPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS---G-GI 318 (396)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEEECCB---CHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC---S-GG
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEeCC---ChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC---c-cH
Confidence 799999999999888899999886432 113445555543211 11 1 24458889999999998 3 33
Q ss_pred HHHHHHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Q 043412 276 PLVEAMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a 354 (383)
..||+++|+|+|++ +.++..|.+..+.+++++. |++++++++.++++|++.+++|++++
T Consensus 319 -~~EA~a~G~PvV~~~~~~~~~e~v~~G~~~lv~~-------------------d~~~l~~ai~~ll~d~~~~~~m~~~~ 378 (396)
T 3dzc_A 319 -QEEAPSLGKPVLVMRETTERPEAVAAGTVKLVGT-------------------NQQQICDALSLLLTDPQAYQAMSQAH 378 (396)
T ss_dssp -GTTGGGGTCCEEECCSSCSCHHHHHHTSEEECTT-------------------CHHHHHHHHHHHHHCHHHHHHHHTSC
T ss_pred -HHHHHHcCCCEEEccCCCcchHHHHcCceEEcCC-------------------CHHHHHHHHHHHHcCHHHHHHHhhcc
Confidence 48999999999999 6677788887776665542 79999999999999999999998764
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
..|.....++++.+.++
T Consensus 379 -----~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 379 -----NPYGDGKACQRIADILA 395 (396)
T ss_dssp -----CTTCCSCHHHHHHHHHH
T ss_pred -----CCCcCChHHHHHHHHHh
Confidence 34555666666666553
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.80 E-value=1.7e-20 Score=173.36 Aligned_cols=279 Identities=12% Similarity=0.092 Sum_probs=178.8
Q ss_pred hhhHHHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeec-CCCCHHHHHh-c-CCCCEE
Q 043412 53 MRNLAVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFET-DRVSPEHVKR-C-NRMDFV 128 (383)
Q Consensus 53 ~~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~ad~v 128 (383)
....+..+.+++++++||+||+|......++ ...+.....++ .....+...|.. .+++....+. + +.+|.+
T Consensus 99 ~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv-----~h~~aglrs~~~~~~~p~~~~r~~~~~~a~~~ 173 (403)
T 3ot5_A 99 TSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKML-----GHVEAGLRTWNKYSPFPEEMNRQLTGVMADIH 173 (403)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEE-----EEESCCCCCSCTTSSTTHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCE-----EEEECCccccccccCCcHHHHHHHHHHhcCEE
Confidence 3456678888999999999999975432221 12111111111 111111111111 1233333333 2 458999
Q ss_pred EEeChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeecccc-ccCHH
Q 043412 129 WVPTDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEY-RKGWD 206 (383)
Q Consensus 129 i~~s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~-~K~~~ 206 (383)
+++|+..++.+.+.|++++++.+++|+ +|...+.+...... ....++ +++.+++++.||... .|+++
T Consensus 174 ~~~se~~~~~l~~~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~--~~~~~l---------~~~~~vlv~~~r~~~~~~~l~ 242 (403)
T 3ot5_A 174 FSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHH--PILENL---------GDNRLILMTAHRRENLGEPMQ 242 (403)
T ss_dssp EESSHHHHHHHHHTTCCGGGEEECCCHHHHHHHHHSCTTCCC--HHHHSC---------TTCEEEEECCCCHHHHTTHHH
T ss_pred ECCCHHHHHHHHHcCCCcccEEEeCCchHHHHHhhhhhhcch--HHHHhc---------cCCCEEEEEeCcccccCcHHH
Confidence 999999999999999998999999994 56433322211000 000011 234566677777543 36789
Q ss_pred HHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC------CCC--CccccccccCceEEecCCCCCCChHHH
Q 043412 207 VLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS------DLE--KPDDGWAPAADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~--~~v~~~~~~adi~v~ps~~e~~~~~~~ 278 (383)
.+++|+.++.+++|++++++.++. .+...+.++++.... +.. .++..+|+.||+++.+| |...+
T Consensus 243 ~ll~a~~~l~~~~~~~~~v~~~~~---~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-----Gg~~~ 314 (403)
T 3ot5_A 243 GMFEAVREIVESREDTELVYPMHL---NPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-----GGVQE 314 (403)
T ss_dssp HHHHHHHHHHHHCTTEEEEEECCS---CHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-----HHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCC---CHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-----ccHHH
Confidence 999999999888899999887432 112344454433211 111 25668899999999887 33448
Q ss_pred HHHHcCCCEEEc-CCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 043412 279 EAMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 279 Ea~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~ 357 (383)
||+++|+|+|++ +.++..|.++.+++++++. |++++++++.++++|++.+++|++++.
T Consensus 315 EA~a~g~PvV~~~~~~~~~e~v~~g~~~lv~~-------------------d~~~l~~ai~~ll~~~~~~~~m~~~~~-- 373 (403)
T 3ot5_A 315 EAPGMGVPVLVLRDTTERPEGIEAGTLKLIGT-------------------NKENLIKEALDLLDNKESHDKMAQAAN-- 373 (403)
T ss_dssp HGGGTTCCEEECCSSCSCHHHHHHTSEEECCS-------------------CHHHHHHHHHHHHHCHHHHHHHHHSCC--
T ss_pred HHHHhCCCEEEecCCCcchhheeCCcEEEcCC-------------------CHHHHHHHHHHHHcCHHHHHHHHhhcC--
Confidence 999999999999 6678888887677776653 899999999999999999999976543
Q ss_pred HHhcCCHHHHHHHHHHHHHHHH
Q 043412 358 MIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
.|.....++++.+.+.+.+
T Consensus 374 ---~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 374 ---PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp ---TTCCSCHHHHHHHHHHHHH
T ss_pred ---cccCCcHHHHHHHHHHHHh
Confidence 3455555666666666554
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.79 E-value=1.7e-18 Score=158.12 Aligned_cols=307 Identities=12% Similarity=0.034 Sum_probs=175.5
Q ss_pred CCCCChhHH---HHHHHHHHHhcccCCCceeeeecCCCcccc-------h--hh--cCC-----------ChhhhhHHHH
Q 043412 5 LSGGGYSSE---SWSYILALNEHVKNPRFKLAIEHHGDLQSL-------Q--FW--EGL-----------PHHMRNLAVE 59 (383)
Q Consensus 5 ~~~~G~~~~---~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~-------~--~~--~~~-----------~~~~~~~~~~ 59 (383)
++.||.+-| +..++++|+++|+...+ .....+ .+.. + .+ .++ +........+
T Consensus 7 i~~GGTgGHi~palala~~L~~~g~~V~~--vg~~~g-~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (365)
T 3s2u_A 7 IMAGGTGGHVFPALACAREFQARGYAVHW--LGTPRG-IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQ 83 (365)
T ss_dssp EECCSSHHHHHHHHHHHHHHHHTTCEEEE--EECSSS-THHHHTGGGTCCEEECC--------------CHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHHHHhCCCEEEE--EECCch-HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 567888777 57899999999875432 222222 1100 0 00 011 1122233456
Q ss_pred HHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHh-cCCCCEEEEeChHHHHH
Q 043412 60 LYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKR-CNRMDFVWVPTDFHVST 138 (383)
Q Consensus 60 l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ad~vi~~s~~~~~~ 138 (383)
+.+++++++||+|+++....++...+.+.....+. + +++.+.......+. .+.++.++...+..
T Consensus 84 ~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~-----v-------ihe~n~~~G~~nr~l~~~a~~v~~~~~~~--- 148 (365)
T 3s2u_A 84 ALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPL-----V-------IHEQNAVAGTANRSLAPIARRVCEAFPDT--- 148 (365)
T ss_dssp HHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCE-----E-------EEECSSSCCHHHHHHGGGCSEEEESSTTS---
T ss_pred HHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCE-----E-------EEecchhhhhHHHhhccccceeeeccccc---
Confidence 67788999999999986544332222222211111 1 11112222222222 35688887765532
Q ss_pred HHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccccCHHHHHHHHHHHhcc
Q 043412 139 FIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSK 218 (383)
Q Consensus 139 ~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~ 218 (383)
+ ....++.+++|++..+.+...... ..+. .+...++++.|++...+..+.+.+++..+..+
T Consensus 149 ---~-~~~~k~~~~g~pvr~~~~~~~~~~---------~~~~------~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~ 209 (365)
T 3s2u_A 149 ---F-PASDKRLTTGNPVRGELFLDAHAR---------APLT------GRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE 209 (365)
T ss_dssp ---S-CC---CEECCCCCCGGGCCCTTSS---------CCCT------TSCCEEEECCTTTTCSHHHHHHHHHHHTSCTT
T ss_pred ---c-cCcCcEEEECCCCchhhccchhhh---------cccC------CCCcEEEEECCcCCccccchhhHHHHHhcccc
Confidence 1 234577888888876655433221 1111 23345566667777777777888888777544
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCC-------CCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD-------LEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
.++.++..++. ...+.+.+.....+ +.+++..+|+.||++|.-+ .++++.|++++|+|+|..+
T Consensus 210 -~~~~vi~~~G~-----~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~ra----G~~Tv~E~~a~G~P~Ilip 279 (365)
T 3s2u_A 210 -IRPAIRHQAGR-----QHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRA----GALTVSELTAAGLPAFLVP 279 (365)
T ss_dssp -TCCEEEEECCT-----TTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEECC----CHHHHHHHHHHTCCEEECC
T ss_pred -cceEEEEecCc-----cccccccceecccccccccccchhhhhhhhccceEEEecC----CcchHHHHHHhCCCeEEec
Confidence 34555444332 22344555555544 3477889999999999543 3689999999999999887
Q ss_pred CCCccc---------cccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC
Q 043412 292 WSGPTE---------YLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRF 362 (383)
Q Consensus 292 ~~g~~e---------~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~ 362 (383)
.+...+ +.+.+.|++++.. +.+++.|+++|.++++||+.+++|++++++. ....
T Consensus 280 ~p~~~~~~Q~~NA~~l~~~G~a~~l~~~----------------~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~-~~~~ 342 (365)
T 3s2u_A 280 LPHAIDDHQTRNAEFLVRSGAGRLLPQK----------------STGAAELAAQLSEVLMHPETLRSMADQARSL-AKPE 342 (365)
T ss_dssp -----CCHHHHHHHHHHTTTSEEECCTT----------------TCCHHHHHHHHHHHHHCTHHHHHHHHHHHHT-CCTT
T ss_pred cCCCCCcHHHHHHHHHHHCCCEEEeecC----------------CCCHHHHHHHHHHHHCCHHHHHHHHHHHHhc-CCcc
Confidence 654322 3333455555432 1279999999999999999999999999874 3344
Q ss_pred CHHHHHHHHHHHH
Q 043412 363 SPETVAGIVTDHI 375 (383)
Q Consensus 363 s~~~~~~~~~~~~ 375 (383)
..+.+++.+.++.
T Consensus 343 aa~~ia~~i~~la 355 (365)
T 3s2u_A 343 ATRTVVDACLEVA 355 (365)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH
Confidence 4444554444443
No 32
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.78 E-value=2e-19 Score=161.44 Aligned_cols=192 Identities=14% Similarity=-0.028 Sum_probs=136.3
Q ss_pred HHhcCCCCEEEEeChHHHHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 119 VKRCNRMDFVWVPTDFHVSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 119 ~~~~~~ad~vi~~s~~~~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
...+++||.|+++|+.+++.+.+.|++..++.++++. |.. .+... . .+.++++++|+|+
T Consensus 128 ~~~y~~aD~Ii~~S~~~~~~l~~~G~~~~ki~~~~~~-~~~--~~~~~-~-----------------~~~~~~~i~yaG~ 186 (339)
T 3rhz_A 128 IAYYNKADVVVAPSQKMIDKLRDFGMNVSKTVVQGMW-DHP--TQAPM-F-----------------PAGLKREIHFPGN 186 (339)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHHTTCCCSEEEECCSC-CCC--CCCCC-C-----------------CCEEEEEEEECSC
T ss_pred HHHHHHCCEEEECCHHHHHHHHHcCCCcCceeecCCC-Ccc--Ccccc-c-----------------ccCCCcEEEEeCC
Confidence 4458999999999999999999999876777655542 211 11100 0 0235689999999
Q ss_pred cccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCC------
Q 043412 199 WEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRG------ 270 (383)
Q Consensus 199 ~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~------ 270 (383)
+..... ++. + .++++|+++|+|+.. .+. -+..+|.. +++..+++.+|+.+.....
T Consensus 187 l~k~~~----L~~---l---~~~~~f~ivG~G~~~------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~ 249 (339)
T 3rhz_A 187 PERFSF----VKE---W---KYDIPLKVYTWQNVE------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQ 249 (339)
T ss_dssp TTTCGG----GGG---C---CCSSCEEEEESCCCC------CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHH
T ss_pred cchhhH----HHh---C---CCCCeEEEEeCCccc------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHH
Confidence 984222 111 1 479999999999542 111 22223332 5667788778887775211
Q ss_pred -CCCChHHHHHHHcCCCEEEcCCCCccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHH
Q 043412 271 -EGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAK 348 (383)
Q Consensus 271 -e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~ 348 (383)
..+|.++.||||||+|||+++.++..+++.+ ++|+.++ +.++++++|..+ +++.++
T Consensus 250 ~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~--------------------~~~e~~~~i~~l--~~~~~~ 307 (339)
T 3rhz_A 250 SLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIVK--------------------DVEEAIMKVKNV--NEDEYI 307 (339)
T ss_dssp TTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEES--------------------SHHHHHHHHHHC--CHHHHH
T ss_pred HhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEeC--------------------CHHHHHHHHHHh--CHHHHH
Confidence 3569999999999999999999999999988 5888876 789999999986 467789
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHH
Q 043412 349 AKGKQAREDMIQRFSPETVAGIV 371 (383)
Q Consensus 349 ~~~~~a~~~~~~~~s~~~~~~~~ 371 (383)
+|++++++. .+.++++.++++.
T Consensus 308 ~m~~na~~~-a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 308 ELVKNVRSF-NPILRKGFFTRRL 329 (339)
T ss_dssp HHHHHHHHH-THHHHTTHHHHHH
T ss_pred HHHHHHHHH-HHHhhccHHHHHH
Confidence 999999885 4556666555543
No 33
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.65 E-value=1e-17 Score=153.48 Aligned_cols=257 Identities=13% Similarity=0.079 Sum_probs=159.3
Q ss_pred hhHHHHHHhhhcCCCccEEEecCCCCCCCCcccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhc--CCCCEEEEe
Q 043412 54 RNLAVELYNTECRTNETVVICHSEPGAWYPPLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRC--NRMDFVWVP 131 (383)
Q Consensus 54 ~~~~~~l~~~~~~~~pDiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ad~vi~~ 131 (383)
.+.+..+.+++++++||+|+++.......+.+.+.....++ ....-|...+. ..++....+.+ +.+|.++++
T Consensus 80 ~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv-----~h~eaglrs~~-~~~pee~nR~~~~~~a~~~~~~ 153 (385)
T 4hwg_A 80 GLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPI-----FHMEAGNRCFD-QRVPEEINRKIIDHISDVNITL 153 (385)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCE-----EEESCCCCCSC-TTSTHHHHHHHHHHHCSEEEES
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCE-----EEEeCCCcccc-ccCcHHHHHHHHHhhhceeecC
Confidence 45677888899999999999997654333322222221112 11111111111 13444333332 568999999
Q ss_pred ChHHHHHHHhcCCCCCCeEEecCC-CcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccc---cccCHHH
Q 043412 132 TDFHVSTFIRSGVDPAKVVKIVQP-VHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWE---YRKGWDV 207 (383)
Q Consensus 132 s~~~~~~~~~~~~~~~~i~vi~ng-id~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~---~~K~~~~ 207 (383)
++..++.+.+.|++++++.+++|+ +|...+...... ....+.+++ ++++++++++.+|.. ..|+++.
T Consensus 154 te~~~~~l~~~G~~~~~I~vtGnp~~D~~~~~~~~~~--~~~~~~~lg-------l~~~~~iLvt~hr~e~~~~~~~l~~ 224 (385)
T 4hwg_A 154 TEHARRYLIAEGLPAELTFKSGSHMPEVLDRFMPKIL--KSDILDKLS-------LTPKQYFLISSHREENVDVKNNLKE 224 (385)
T ss_dssp SHHHHHHHHHTTCCGGGEEECCCSHHHHHHHHHHHHH--HCCHHHHTT-------CCTTSEEEEEECCC-----CHHHHH
T ss_pred CHHHHHHHHHcCCCcCcEEEECCchHHHHHHhhhhcc--hhHHHHHcC-------CCcCCEEEEEeCCchhcCcHHHHHH
Confidence 999999999999998999999985 443211100000 001112222 344567777777643 3478899
Q ss_pred HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH---Hhh-CCC--C-----CccccccccCceEEecCCCCCCChH
Q 043412 208 LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF---VED-SDL--E-----KPDDGWAPAADVFVLPSRGEGWGRP 276 (383)
Q Consensus 208 ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~-~~~--~-----~~v~~~~~~adi~v~ps~~e~~~~~ 276 (383)
+++|+.++.+++ ++.+++.... ...+.+++. ... .++ . .++..+++.||+++.+| |..
T Consensus 225 ll~al~~l~~~~-~~~vv~p~~p-----~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvvt~S-----Ggv 293 (385)
T 4hwg_A 225 LLNSLQMLIKEY-NFLIIFSTHP-----RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCILSDS-----GTI 293 (385)
T ss_dssp HHHHHHHHHHHH-CCEEEEEECH-----HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEEECC-----TTH
T ss_pred HHHHHHHHHhcC-CeEEEEECCh-----HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEEECC-----ccH
Confidence 999999987665 7777775532 223333322 110 010 0 13346789999999776 446
Q ss_pred HHHHHHcCCCEEEcCCC-CccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 043412 277 LVEAMSMGLPVIATNWS-GPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQAR 355 (383)
Q Consensus 277 ~~Ea~a~G~PvI~~~~~-g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~ 355 (383)
..||+++|+|+|+.... +..|.++.+++.+++. |++++++++.++++|++.++.|++++.
T Consensus 294 ~~EA~alG~Pvv~~~~~ter~e~v~~G~~~lv~~-------------------d~~~i~~ai~~ll~d~~~~~~m~~~~~ 354 (385)
T 4hwg_A 294 TEEASILNLPALNIREAHERPEGMDAGTLIMSGF-------------------KAERVLQAVKTITEEHDNNKRTQGLVP 354 (385)
T ss_dssp HHHHHHTTCCEEECSSSCSCTHHHHHTCCEECCS-------------------SHHHHHHHHHHHHTTCBTTBCCSCCCH
T ss_pred HHHHHHcCCCEEEcCCCccchhhhhcCceEEcCC-------------------CHHHHHHHHHHHHhChHHHHHhhccCC
Confidence 79999999999998663 3567776666666542 899999999999999887776655443
No 34
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.64 E-value=3.2e-17 Score=152.52 Aligned_cols=165 Identities=15% Similarity=0.174 Sum_probs=117.6
Q ss_pred CCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 187 SSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 187 ~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+++..++++.|++. .++.+.+.+++..+.+. ++++++++++...... ...+...+...+.. ++..+++.||++|.
T Consensus 240 ~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~~~-l~~~~~~v~~~~~~-~~~~~l~~ad~~v~ 314 (412)
T 3otg_A 240 TARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDVSG-LGEVPANVRLESWV-PQAALLPHVDLVVH 314 (412)
T ss_dssp TTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCCTT-CCCCCTTEEEESCC-CHHHHGGGCSEEEE
T ss_pred CCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCChhh-hccCCCcEEEeCCC-CHHHHHhcCcEEEE
Confidence 35567888999885 67777777777776543 5677766655321111 11111222333444 57789999999997
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
++ .+.+++|||++|+|+|+.+.++ ..+.+.+ ++|++++.+ ..|+++++++|.+++
T Consensus 315 ~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~----------------~~~~~~l~~ai~~ll 374 (412)
T 3otg_A 315 HG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPD----------------NISPDSVSGAAKRLL 374 (412)
T ss_dssp SC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGG----------------GCCHHHHHHHHHHHH
T ss_pred CC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcc----------------cCCHHHHHHHHHHHH
Confidence 65 3479999999999999977653 4455544 466666542 128999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
+|++.+++|++.+++. .+.++++.+++.+.+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 375 AEESYRAGARAVAAEI-AAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HCHHHHHHHHHHHHHH-HHSCCHHHHHTTHHHHHC-
T ss_pred hCHHHHHHHHHHHHHH-hcCCCHHHHHHHHHHHhcc
Confidence 9999999999998885 6778999999999888754
No 35
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.50 E-value=1.9e-15 Score=139.49 Aligned_cols=161 Identities=14% Similarity=0.116 Sum_probs=111.7
Q ss_pred CCcEEEEEeeccccccCH-HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHH---HHhhCCCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGW-DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVN---FVEDSDLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~-~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~adi 263 (383)
++..++++.|+....|+. ..+++++.+. .+.|++++++.+++. ..+.+.. .+.-.+.. +...++..||+
T Consensus 217 ~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~-----~~~~l~~~~~~v~~~~~~-~~~~ll~~ad~ 289 (391)
T 3tsa_A 217 SARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPE-----HRALLTDLPDNARIAESV-PLNLFLRTCEL 289 (391)
T ss_dssp SSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGG-----GGGGCTTCCTTEEECCSC-CGGGTGGGCSE
T ss_pred CCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCc-----chhhcccCCCCEEEeccC-CHHHHHhhCCE
Confidence 456788888988665444 6677777777 777899999998762 1222211 11112222 23567799999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCC----CCccccccC-CCceeeec--ccccccccCCCCcccccCCCHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNW----SGPTEYLTE-ENGYPLLV--GRMSEVTEGPFKGHFWAEPSVDKLRAL 336 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~g~~e~v~~-~~g~~~~~--~~~~~~~~~~~~g~~~~~~~~~~la~~ 336 (383)
+|.. +.+.+++|||++|+|+|+.+. .+..+.+.+ +.|.+++. . ..++++++++
T Consensus 290 ~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~----------------~~~~~~l~~a 349 (391)
T 3tsa_A 290 VICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQA----------------QSDHEQFTDS 349 (391)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHH----------------HTCHHHHHHH
T ss_pred EEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccc----------------cCCHHHHHHH
Confidence 9953 445799999999999999654 233344443 45555553 1 0389999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 337 MRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 337 i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+.++++|++.+++|++.+++. .+..+++.+++.+.+++.
T Consensus 350 i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 350 IATVLGDTGFAAAAIKLSDEI-TAMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHTCTHHHHHHHHHHHHH-HTSCCHHHHHHHHHHC--
T ss_pred HHHHHcCHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHh
Confidence 999999999999998888774 678899888888776543
No 36
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.50 E-value=2.4e-14 Score=133.88 Aligned_cols=210 Identities=14% Similarity=0.014 Sum_probs=126.6
Q ss_pred CCCEEEEeChHHHHHHHhcCCCCCC-eEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeeccccc
Q 043412 124 RMDFVWVPTDFHVSTFIRSGVDPAK-VVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFKWEYR 202 (383)
Q Consensus 124 ~ad~vi~~s~~~~~~~~~~~~~~~~-i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~~~~~ 202 (383)
.+|.+++.+....+.... ..+ .+ +..++++++... ... ..... .+++.+++++.|++. .
T Consensus 185 ~~~~~l~~~~~~~~~~~~-~~~-~~~v~~vG~~~~~~~---~~~-~~~~~-------------~~~~~~v~v~~Gs~~-~ 244 (430)
T 2iyf_A 185 HPPRSLVLIPKALQPHAD-RVD-EDVYTFVGACQGDRA---EEG-GWQRP-------------AGAEKVVLVSLGSAF-T 244 (430)
T ss_dssp CCSSEEECSCGGGSTTGG-GSC-TTTEEECCCCC--------CC-CCCCC-------------TTCSEEEEEECTTTC-C
T ss_pred CCCcEEEeCcHHhCCCcc-cCC-CccEEEeCCcCCCCC---CCC-CCccc-------------cCCCCeEEEEcCCCC-C
Confidence 478888887655443322 222 24 777776654211 000 00000 134568899999987 5
Q ss_pred cCHHHHHHHHHHHhccCCCeEE-EEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHH
Q 043412 203 KGWDVLLKAYLEEFSKADGVVL-YLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAM 281 (383)
Q Consensus 203 K~~~~ll~a~~~l~~~~~~~~l-~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~ 281 (383)
++.+.+.+++..+. +.+++++ +++|.+... +....+...+.-.+..++. .+++.||++|..+ .+.+++|||
T Consensus 245 ~~~~~~~~~~~~l~-~~~~~~~~~~~G~~~~~--~~l~~~~~~v~~~~~~~~~-~~l~~ad~~v~~~----G~~t~~Ea~ 316 (430)
T 2iyf_A 245 KQPAFYRECVRAFG-NLPGWHLVLQIGRKVTP--AELGELPDNVEVHDWVPQL-AILRQADLFVTHA----GAGGSQEGL 316 (430)
T ss_dssp -CHHHHHHHHHHHT-TCTTEEEEEECC---CG--GGGCSCCTTEEEESSCCHH-HHHTTCSEEEECC----CHHHHHHHH
T ss_pred CcHHHHHHHHHHHh-cCCCeEEEEEeCCCCCh--HHhccCCCCeEEEecCCHH-HHhhccCEEEECC----CccHHHHHH
Confidence 55555555554443 2257887 467765321 1101111112223444454 7899999999755 237899999
Q ss_pred HcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 043412 282 SMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 282 a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~ 356 (383)
++|+|+|+++..+ ..+.+.+ +.|+.++.+ ..++++++++|.++++|++.++++++.+++
T Consensus 317 ~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~----------------~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~ 380 (430)
T 2iyf_A 317 ATATPMIAVPQAVDQFGNADMLQGLGVARKLATE----------------EATADLLRETALALVDDPEVARRLRRIQAE 380 (430)
T ss_dssp HTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-----------------CCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HhCCCEEECCCccchHHHHHHHHHcCCEEEcCCC----------------CCCHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 9999999998754 2333333 455555432 117899999999999999999999998887
Q ss_pred HHHhcCCHHHHHHHHHHHHHHH
Q 043412 357 DMIQRFSPETVAGIVTDHIKDI 378 (383)
Q Consensus 357 ~~~~~~s~~~~~~~~~~~~~~~ 378 (383)
. .+.++++.+++.+.+++++.
T Consensus 381 ~-~~~~~~~~~~~~i~~~~~~~ 401 (430)
T 2iyf_A 381 M-AQEGGTRRAADLIEAELPAR 401 (430)
T ss_dssp H-HHHCHHHHHHHHHHTTSCC-
T ss_pred H-HhcCcHHHHHHHHHHHhhcc
Confidence 5 45679999988888776544
No 37
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.40 E-value=1.3e-14 Score=134.34 Aligned_cols=153 Identities=14% Similarity=0.112 Sum_probs=95.8
Q ss_pred CCcEEEEEeecccccc----------CHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH---HhhCCCCCcc
Q 043412 188 SKEFVFLSVFKWEYRK----------GWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF---VEDSDLEKPD 254 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K----------~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~v 254 (383)
+...++++.|++...| .+..+++++..+ ++++++++++.. .+.+... +.-.+.. +.
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~-----~~~l~~~~~~v~~~~~~-~~ 294 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKL-----AQTLQPLPEGVLAAGQF-PL 294 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC-------------CCTTEEEESCC-CH
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcc-----hhhhccCCCcEEEeCcC-CH
Confidence 4568888899986444 456666665443 688888887621 2222221 1122332 35
Q ss_pred ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC----CccccccC-CCceeeecccccccccCCCCcccccCCC
Q 043412 255 DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS----GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 255 ~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
..++..||++|. .+.+.+++|||++|+|+|+.+.. +..+.+.+ +.|++++.+ ..+
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~----------------~~~ 354 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWE----------------QAG 354 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC---------------------
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcc----------------cCC
Confidence 678899999994 44568999999999999996553 44555544 466555432 117
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Q 043412 330 VDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVT 372 (383)
Q Consensus 330 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 372 (383)
++++++++.++++|++.+++|++.+++. .+..+++.+++.+.
T Consensus 355 ~~~l~~ai~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 355 VESVLAACARIRDDSSYVGNARRLAAEM-ATLPTPADIVRLIE 396 (398)
T ss_dssp --CHHHHHHHHHHCTHHHHHHHHHHHHH-TTSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHH-HcCCCHHHHHHHHh
Confidence 8999999999999999999999988874 67889998888764
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.36 E-value=1.8e-13 Score=126.60 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=105.5
Q ss_pred CCcEEEEEeeccccc-cCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYR-KGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~-K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|++... ++.+.+.+++..+.+. ++++++++++.. .+....+...+.-.+.. ++..++..||++|.
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~--~~~l~~~~~~v~~~~~~-~~~~ll~~ad~~v~ 305 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLD--ISPLGTLPRNVRAVGWT-PLHTLLRTCTAVVH 305 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSC--CGGGCSCCTTEEEESSC-CHHHHHTTCSEEEE
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcC--hhhhccCCCcEEEEccC-CHHHHHhhCCEEEE
Confidence 456888999998554 3555555555555433 688999887632 11111111112223333 55678899999995
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEc----CCCCcc--ccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIAT----NWSGPT--EYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~----~~~g~~--e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
. +.+.+++|||++|+|+|+. +..+.. +.+.+ +.|+.++..+ .+++.++ +
T Consensus 306 ~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~----------------~~~~~l~----~ 361 (398)
T 3oti_A 306 H----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDK----------------VDADLLR----R 361 (398)
T ss_dssp C----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGG----------------CCHHHHH----H
T ss_pred C----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCC----------------CCHHHHH----H
Confidence 3 4457999999999999994 445555 66655 5666665321 1556665 8
Q ss_pred HhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
+++|++.+++|++.+++ +....+++.+++.+.+++
T Consensus 362 ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 362 LIGDESLRTAAREVREE-MVALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHh
Confidence 88999999999888887 478899999998887664
No 39
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.34 E-value=2.2e-12 Score=119.30 Aligned_cols=163 Identities=10% Similarity=0.060 Sum_probs=103.2
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|+....+ .+.+..++..+ .+.+ +++++ +|++.. .+....+...+.-.+..++. .++..||++|.
T Consensus 230 ~~~~v~v~~G~~~~~~-~~~~~~~~~~~-~~~~-~~~~~~~g~~~~--~~~~~~~~~~v~~~~~~~~~-~ll~~ad~~v~ 303 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEH-PEFFRACAQAF-ADTP-WHVVMAIGGFLD--PAVLGPLPPNVEAHQWIPFH-SVLAHARACLT 303 (402)
T ss_dssp TCCEEEEECCSCSSCC-HHHHHHHHHHH-TTSS-CEEEEECCTTSC--GGGGCSCCTTEEEESCCCHH-HHHTTEEEEEE
T ss_pred CCCEEEEECCCCCcch-HHHHHHHHHHH-hcCC-cEEEEEeCCcCC--hhhhCCCCCcEEEecCCCHH-HHHhhCCEEEE
Confidence 4578888999876544 23333333333 2333 66665 443311 11111111112223444444 88899999996
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCC-C----CccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHH
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNW-S----GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLV 340 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~-~----g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~l 340 (383)
.+ ...+++|||++|+|+|+... . +..+.+.+ +.|..++.+ ..+++++++++.++
T Consensus 304 ~~----G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~----------------~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 304 HG----TTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPD----------------QLEPASIREAVERL 363 (402)
T ss_dssp CC----CHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGG----------------GCSHHHHHHHHHHH
T ss_pred CC----CHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCC----------------CCCHHHHHHHHHHH
Confidence 65 23688999999999997654 2 33344433 455544432 12899999999999
Q ss_pred hcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 341 VSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 341 l~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
++|++.++++++.+++ +.+..+++.+++.+.+++++
T Consensus 364 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 364 AADSAVRERVRRMQRD-ILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHCHHHHHHHHHHHHH-HHTSCHHHHHHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHH-HhhCChHHHHHHHHHHHHhh
Confidence 9999999999888776 46778899888888887764
No 40
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.30 E-value=4.6e-12 Score=119.85 Aligned_cols=263 Identities=12% Similarity=0.031 Sum_probs=155.2
Q ss_pred HHHHHhhhcCCCccEEEecCCCCCCCC-cccccCCCCCCCCCCCcccccceeeeecCCCCHHHHHhcCCCCEEEEeChHH
Q 043412 57 AVELYNTECRTNETVVICHSEPGAWYP-PLFDTLPCPPTPGYGDFMAVIGRTMFETDRVSPEHVKRCNRMDFVWVPTDFH 135 (383)
Q Consensus 57 ~~~l~~~~~~~~pDiV~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~ 135 (383)
...+.+.+++.++||++--+....... ..+..++.+.. ....|+-. ... +...|.+++-....
T Consensus 338 ~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAPVQ------vs~lGyp~--TTG--------l~~iDY~i~D~~~~ 401 (631)
T 3q3e_A 338 LEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAPIQ------AIALGHPA--TTH--------SDFIEYVIVEDDYV 401 (631)
T ss_dssp HHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSSEE------EEECSSCS--CCC--------CTTCCEEEEEGGGC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCchhHHHHhCCCchhe------EeccCCCc--ccC--------cccCCEEEeCCCCC
Confidence 566778888899999887543221111 11112233322 11112110 011 14567777643211
Q ss_pred HHHHHhcCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCC--CcEEEEEeeccccccCHHHHHHHHH
Q 043412 136 VSTFIRSGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSS--KEFVFLSVFKWEYRKGWDVLLKAYL 213 (383)
Q Consensus 136 ~~~~~~~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~i~~~g~~~~~K~~~~ll~a~~ 213 (383)
. -..+ ..+++..+|+..= .+.|..... .+...+ ++. +.++|+++++ ..|..+.+++++.
T Consensus 402 -~-~~~~--ysEklirLP~~~~--~~~p~~~~p----~r~~~~-------lp~~~G~v~Fg~fn~--~~Ki~p~~l~~Wa 462 (631)
T 3q3e_A 402 -G-SEEC--FSETLLRLPKDAL--PYVPSALAP----EKVDYL-------LRENPEVVNIGIAST--TMKLNPYFLEALK 462 (631)
T ss_dssp -C-CGGG--CSSEEEEECTTSS--CCCCCTTCC----SSCCCC-------CCSCCSEEEEEEEEC--STTCCHHHHHHHH
T ss_pred -C-cccC--ceeeEEECCCCcc--ccCCcccCC----cccccc-------CCcCCCeEEEEECCc--cccCCHHHHHHHH
Confidence 0 0112 2468888887421 122222111 012222 234 3788888887 4688999999999
Q ss_pred HHhccCCCeEEE--EEeCCCCCCCchHHHHHHHHhhCCCCCcc-----------ccccccCceEEecCCCCCCChHHHHH
Q 043412 214 EEFSKADGVVLY--LLTNPYHSGRDFGNKIVNFVEDSDLEKPD-----------DGWAPAADVFVLPSRGEGWGRPLVEA 280 (383)
Q Consensus 214 ~l~~~~~~~~l~--i~G~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~~adi~v~ps~~e~~~~~~~Ea 280 (383)
++.++.|+..+. +.|.+. .....+.+.+...|+.+++ ...|+.+|+++.|+.+.| |++.+||
T Consensus 463 rIL~~vP~s~L~l~~~g~~~----g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEA 537 (631)
T 3q3e_A 463 AIRDRAKVKVHFHFALGQSN----GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDM 537 (631)
T ss_dssp HHHHHCSSEEEEEEEESSCC----GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHH
T ss_pred HHHHhCCCcEEEEEecCCCc----hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHH
Confidence 999999987664 355321 2223333333444554332 366799999999987654 9999999
Q ss_pred HHcCCCEEEcCCCCcccccc------CC-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHHHH
Q 043412 281 MSMGLPVIATNWSGPTEYLT------EE-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKGKQ 353 (383)
Q Consensus 281 ~a~G~PvI~~~~~g~~e~v~------~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~~~ 353 (383)
|+||+|||+.....+..-+. -+ .++++. .|.+++++...++.+|++.+.+++++
T Consensus 538 LwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA-------------------~d~eeYv~~Av~La~D~~~l~~LR~~ 598 (631)
T 3q3e_A 538 VTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIA-------------------NTVDEYVERAVRLAENHQERLELRRY 598 (631)
T ss_dssp HHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEE-------------------SSHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceec-------------------CCHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999987655544432 12 222111 18999999999999999999999998
Q ss_pred HHHHHHh--cCCHHHHHHHHHHHHHHHHh
Q 043412 354 AREDMIQ--RFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 354 a~~~~~~--~~s~~~~~~~~~~~~~~~~~ 380 (383)
.++.... .|+ ...+++.+.|+++++
T Consensus 599 Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 599 IIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 8775433 344 445566666655543
No 41
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.17 E-value=4.4e-11 Score=111.10 Aligned_cols=160 Identities=14% Similarity=-0.006 Sum_probs=100.8
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHH---HHhhCCCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVN---FVEDSDLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~adi 263 (383)
+...++++.|+..... .+.+-.++..+ .+.+ +++++ +|.+.. .+.+.. .+.-.+..++. .++..||+
T Consensus 246 ~~~~v~v~~Gs~~~~~-~~~~~~~~~al-~~~~-~~~v~~~g~~~~-----~~~l~~~~~~v~~~~~~~~~-~ll~~ad~ 316 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDR-PGFFRDCARAF-DGQP-WHVVMTLGGQVD-----PAALGDLPPNVEAHRWVPHV-KVLEQATV 316 (415)
T ss_dssp CCCEEEEECTTTSCCC-HHHHHHHHHHH-TTSS-CEEEEECTTTSC-----GGGGCCCCTTEEEESCCCHH-HHHHHEEE
T ss_pred CCCEEEEECCCCCCCh-HHHHHHHHHHH-hcCC-cEEEEEeCCCCC-----hHHhcCCCCcEEEEecCCHH-HHHhhCCE
Confidence 4578888989875432 22222233223 3334 77777 443311 111111 11122333333 78899999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCC----CccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWS----GPTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR 338 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----g~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~ 338 (383)
+|..+ ...+++||+++|+|+|+.... ...+.+.+ +.|..++.+ ..+++++++++.
T Consensus 317 ~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~ 376 (415)
T 3rsc_A 317 CVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGE----------------KADGDTLLAAVG 376 (415)
T ss_dssp EEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGG----------------GCCHHHHHHHHH
T ss_pred EEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccC----------------CCCHHHHHHHHH
Confidence 99654 236889999999999996542 23333333 455544432 128999999999
Q ss_pred HHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 339 LVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 339 ~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
++++|++.++++.+.+++ +....+.+.+++.+.+++.+
T Consensus 377 ~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 377 AVAADPALLARVEAMRGH-VRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHHTCHHHHHHHHHHHHH-HHHSCHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHhhc
Confidence 999999999999888776 46778888888888777653
No 42
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.11 E-value=9.4e-10 Score=101.00 Aligned_cols=155 Identities=17% Similarity=0.156 Sum_probs=107.3
Q ss_pred CCcEEEEEeeccccc-------cCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHH---HhhCCCCCccccc
Q 043412 188 SKEFVFLSVFKWEYR-------KGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNF---VEDSDLEKPDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~-------K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~ 257 (383)
+...++++.|++... +.+..+++++..+ ++++++++++ ...+.+... +.- +.. +...+
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~-----~~~~~l~~~~~~v~~-~~~-~~~~~ 276 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPD-----TVAEALRAEVPQARV-GWT-PLDVV 276 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCH-----HHHHHHHHHCTTSEE-ECC-CHHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCC-----CCHHhhCCCCCceEE-cCC-CHHHH
Confidence 346789999998764 5677777777543 6788887654 223333322 112 332 34678
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
+..||++|..+ .+.+++|||++|+|+|+.+..+ ..+.+.+ +.|+.++.+ ..++++
T Consensus 277 l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~----------------~~~~~~ 336 (384)
T 2p6p_A 277 APTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPG----------------EDSTEA 336 (384)
T ss_dssp GGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTT----------------CCCHHH
T ss_pred HhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcC----------------CCCHHH
Confidence 89999999753 4578999999999999998743 4444443 456555432 127999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 333 LRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
++++|.++++|++.++++++.+++. ...-..+.+++.+.++.
T Consensus 337 l~~~i~~ll~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 337 IADSCQELQAKDTYARRAQDLSREI-SGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHH-HTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHh
Confidence 9999999999999999998888764 56667777776666554
No 43
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.01 E-value=2.2e-10 Score=92.46 Aligned_cols=133 Identities=11% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCcEEEEEeeccc---cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCcccccc--ccCc
Q 043412 188 SKEFVFLSVFKWE---YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWA--PAAD 262 (383)
Q Consensus 188 ~~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~ad 262 (383)
+...++++.|++. +.|.+..+++++..+ +.++++++++... +.+...+.-.+...+ ..++ ..||
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~ad 88 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKP-----DTLGLNTRLYKWIPQ-NDLLGHPKTR 88 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCC-----TTCCTTEEEESSCCH-HHHHTSTTEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCc-----ccCCCcEEEecCCCH-HHHhcCCCcC
Confidence 3467899999885 567777777777432 4678777765321 111111222233222 3445 8999
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
++|.. +.+.+++|||++|+|+|+.+..+ ..+.+.+ +.|+.++.. ..++++++++|
T Consensus 89 ~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i 148 (170)
T 2o6l_A 89 AFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFN----------------TMSSTDLLNAL 148 (170)
T ss_dssp EEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTT----------------TCCHHHHHHHH
T ss_pred EEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccc----------------cCCHHHHHHHH
Confidence 99964 34689999999999999998742 2333443 455544422 12899999999
Q ss_pred HHHhcCHHHHHHHH
Q 043412 338 RLVVSNVDEAKAKG 351 (383)
Q Consensus 338 ~~ll~~~~~~~~~~ 351 (383)
.++++|++.++++.
T Consensus 149 ~~ll~~~~~~~~a~ 162 (170)
T 2o6l_A 149 KRVINDPSYKENVM 162 (170)
T ss_dssp HHHHHCHHHHHHHH
T ss_pred HHHHcCHHHHHHHH
Confidence 99999987554443
No 44
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.98 E-value=7.1e-10 Score=103.80 Aligned_cols=160 Identities=18% Similarity=0.147 Sum_probs=105.8
Q ss_pred CCcEEEEEeecccc-----ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCc
Q 043412 188 SKEFVFLSVFKWEY-----RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAAD 262 (383)
Q Consensus 188 ~~~~~i~~~g~~~~-----~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ad 262 (383)
+...++++.|++.. .+.+..+++++..+ ++++++.+++... ... ..+...+.-.+..++ ..++..||
T Consensus 266 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~-~~l-~~~~~~v~~~~~~~~-~~ll~~ad 337 (441)
T 2yjn_A 266 ERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQL-EGV-ANIPDNVRTVGFVPM-HALLPTCA 337 (441)
T ss_dssp SSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTT-SSC-SSCCSSEEECCSCCH-HHHGGGCS
T ss_pred CCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcch-hhh-ccCCCCEEEecCCCH-HHHHhhCC
Confidence 34678899998865 37788888888553 6788887765221 111 001011122233333 56789999
Q ss_pred eEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 263 VFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 263 i~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
++|.. +.+.+++||+++|+|+|+.+..+ ..+.+.+ +.|+.++.. ..++++++++|
T Consensus 338 ~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i 397 (441)
T 2yjn_A 338 ATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVP----------------ELTPDQLRESV 397 (441)
T ss_dssp EEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTT----------------TCCHHHHHHHH
T ss_pred EEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccc----------------cCCHHHHHHHH
Confidence 99963 44579999999999999998743 3344443 455555432 12899999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 338 RLVVSNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 338 ~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
.++++|++.++++.+.+++ +......+.+++.+.+++.
T Consensus 398 ~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 398 KRVLDDPAHRAGAARMRDD-MLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HHHHHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHH
Confidence 9999999999999888776 4677888888888777654
No 45
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.91 E-value=4.3e-09 Score=101.80 Aligned_cols=238 Identities=14% Similarity=0.068 Sum_probs=154.3
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCCC----CCCC----------C--------------
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFFD----PVNC----------D-------------- 167 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~~----~~~~----------~-------------- 167 (383)
+..++.|-.+|+...+.++. +..-++++.-|.||||...+. |... .
T Consensus 400 i~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~ 479 (796)
T 2c4m_A 400 CYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSY 479 (796)
T ss_dssp HHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGG
T ss_pred HHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhh
Confidence 57899999999999998874 223456899999999988772 2200 0
Q ss_pred CCc---------cccCCcccc-----ccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHHHHhc--cC-----CCeEEE
Q 043412 168 PID---------LASIGKPVL-----GLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYLEEFS--KA-----DGVVLY 225 (383)
Q Consensus 168 ~~~---------~~~~~~~~l-----~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~--~~-----~~~~l~ 225 (383)
... .....+..+ ...++.++++.++++++.|+..+|+.++ ++..+.++.+ +. .+++++
T Consensus 480 ~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~I 559 (796)
T 2c4m_A 480 ADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVI 559 (796)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEE
Confidence 000 000001110 0012456788999999999999999999 8888776653 22 369999
Q ss_pred EEeCCCCCCCchHHH---HHHHHh----hCCCCC--cc-----------ccccccCceEEecCC--CCCCChHHHHHHHc
Q 043412 226 LLTNPYHSGRDFGNK---IVNFVE----DSDLEK--PD-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSM 283 (383)
Q Consensus 226 i~G~~~~~~~~~~~~---~~~~~~----~~~~~~--~v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~ 283 (383)
+.|.+.+........ +.++++ .-.+.+ ++ ..++..||++++||+ .|++|++-|=+|..
T Consensus 560 f~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N 639 (796)
T 2c4m_A 560 FGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN 639 (796)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT
T ss_pred EEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 999985432222111 333333 112333 22 366799999999999 99999999999999
Q ss_pred CCCEEEcCCCCccccccC---CCceeeecccccccccCCCCcccccCCCHHHHHHH---HHHHhcCHHHHHHHHHHHHHH
Q 043412 284 GLPVIATNWSGPTEYLTE---ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL---MRLVVSNVDEAKAKGKQARED 357 (383)
Q Consensus 284 G~PvI~~~~~g~~e~v~~---~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~---i~~ll~~~~~~~~~~~~a~~~ 357 (383)
|++.|++-.|...|+.++ +|||++... ..++.++... ..-.-.+++ .+++..++
T Consensus 640 GaL~iGtLDGanvEi~e~vG~~NgF~FG~~----------------~~ev~~l~~~y~a~~~y~~~~~-~~~vvd~~--- 699 (796)
T 2c4m_A 640 GALTLGTMDGANVEIVDSVGEENAYIFGAR----------------VEELPALRESYKPYELYETVPG-LKRALDAL--- 699 (796)
T ss_dssp TCEEEEESSTHHHHHHHHHCGGGSEEESCC----------------TTTHHHHHHTCCHHHHHHHSTT-HHHHHHTT---
T ss_pred CCeEEeccCCeEeehhhhcCCCcEEEecCc----------------hhhHHHHHHhhChHHHhhcCHH-HHHHHHHH---
Confidence 999999988877777643 577777541 0256555543 222223443 33333332
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHh
Q 043412 358 MIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 358 ~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+...|||+.- .+|..+|+.++.
T Consensus 700 ~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 700 DNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp TSSSSCCTTC-CHHHHHHHHHHS
T ss_pred HcCCCCCCCH-HHHHHHHHHHHh
Confidence 2357888776 778888888764
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.90 E-value=6.8e-08 Score=95.41 Aligned_cols=176 Identities=11% Similarity=0.079 Sum_probs=129.9
Q ss_pred CCCCCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-cc---------
Q 043412 185 NTSSKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-PD--------- 254 (383)
Q Consensus 185 ~~~~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~v--------- 254 (383)
+++++.++|+++.++ .|=-+..++++.+++++.|+-+|++.... ......+.+.++..|+.. ++
T Consensus 518 gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~----~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 518 GLPEDAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFP----AVGEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp TCCTTSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETT----GGGHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCc----HHHHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 367899999988764 57778899999999999999999998754 244677888888888862 22
Q ss_pred --ccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHH
Q 043412 255 --DGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDK 332 (383)
Q Consensus 255 --~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (383)
...++.+|+++-|.-+ +.+.+..||+++|+|||+-....+..=+. .+++-..+ +++. -..|.++
T Consensus 592 ~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~--~s~l~~~g-l~e~----------ia~~~~~ 657 (723)
T 4gyw_A 592 EHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVA--ASQLTCLG-CLEL----------IAKNRQE 657 (723)
T ss_dssp HHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHH--HHHHHHHT-CGGG----------BCSSHHH
T ss_pred HHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHH--HHHHHHcC-Cccc----------ccCCHHH
Confidence 2456899999988655 44899999999999999986432222111 00110000 1111 1128999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHh
Q 043412 333 LRALMRLVVSNVDEAKAKGKQAREDMIQ--RFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 333 la~~i~~ll~~~~~~~~~~~~a~~~~~~--~~s~~~~~~~~~~~~~~~~~ 380 (383)
+.+...++-+|++.+.++...-++.... -|+-..+++.+++.|+++-+
T Consensus 658 Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~ 707 (723)
T 4gyw_A 658 YEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWE 707 (723)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888877766544 69999999999999998754
No 47
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.83 E-value=4.9e-08 Score=94.86 Aligned_cols=234 Identities=15% Similarity=0.037 Sum_probs=151.4
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCC----CCCCCC----C-----------------Cc
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFF----DPVNCD----P-----------------ID 170 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~----~~~~~~----~-----------------~~ 170 (383)
+..++.|-.+|+-..+.++. +...++++.-|-|||+...+ .|.... . ..
T Consensus 435 i~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~ 514 (824)
T 2gj4_A 435 IAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYV 514 (824)
T ss_dssp HHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGT
T ss_pred HHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhcc
Confidence 68899999999999988863 12235789999999998877 221100 0 00
Q ss_pred --cc---------cCCccc----ccc-CCCCCCCCcEEEEEeeccccccCHHHH-HHHHHHHhc--cCC-----CeEEEE
Q 043412 171 --LA---------SIGKPV----LGL-SNMNTSSKEFVFLSVFKWEYRKGWDVL-LKAYLEEFS--KAD-----GVVLYL 226 (383)
Q Consensus 171 --~~---------~~~~~~----l~~-~~~~~~~~~~~i~~~g~~~~~K~~~~l-l~a~~~l~~--~~~-----~~~l~i 226 (383)
.. ...+.. +.. .++.++++.++++++.|+..+|+.+++ +..+.++.+ +.| ++++++
T Consensus 515 ~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If 594 (824)
T 2gj4_A 515 DDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMI 594 (824)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEE
Confidence 00 000011 000 134567889999999999999999997 777766641 233 689999
Q ss_pred EeCCCCCCCchHHH---HHHHHhhCCC----CC--cc-----------ccccccCceEEecCC--CCCCChHHHHHHHcC
Q 043412 227 LTNPYHSGRDFGNK---IVNFVEDSDL----EK--PD-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMG 284 (383)
Q Consensus 227 ~G~~~~~~~~~~~~---~~~~~~~~~~----~~--~v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G 284 (383)
.|.+.+........ +.++++..+- .+ ++ ..++..||++++||+ .|++|++-|=||..|
T Consensus 595 ~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNG 674 (824)
T 2gj4_A 595 GGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNG 674 (824)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTT
T ss_pred EEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 99985432222111 3444432221 22 12 366699999999999 999999999999999
Q ss_pred CCEEEcCCCCccccc---cCCCceeeecccccccccCCCCcccccCCCHHHHHHHHH-------HHhcCHHHHHHHHHHH
Q 043412 285 LPVIATNWSGPTEYL---TEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMR-------LVVSNVDEAKAKGKQA 354 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v---~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~-------~ll~~~~~~~~~~~~a 354 (383)
++.|++-.|...|+. ..+|||++.. .++++ .+++ .++++....+++..+.
T Consensus 675 aLtigtlDGanvEi~e~vG~~Ngf~FG~-------------------~~~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i 734 (824)
T 2gj4_A 675 ALTIGTMDGANVEMAEEAGEENFFIFGM-------------------RVEDV-DRLDQRGYNAQEYYDRIPELRQIIEQL 734 (824)
T ss_dssp CEEEECSCTTHHHHHHHHCGGGSEECSC-------------------CHHHH-HHHHHHCCCHHHHHHHCHHHHHHHHHH
T ss_pred ceEEEEecCccchhhhccCCCCEEEeCC-------------------cHHHH-HHHHHcCCCHHHHhcCCHHHHHHHHHH
Confidence 999999887776765 3457777763 35555 3332 2333222333333433
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHH
Q 043412 355 REDMIQRFSPETVAGIVTDHIKDIL 379 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~~~ 379 (383)
+...|+|+.- .+|..+|+.++
T Consensus 735 ---~~g~fs~~~~-~~y~~ly~~l~ 755 (824)
T 2gj4_A 735 ---SSGFFSPKQP-DLFKDIVNMLM 755 (824)
T ss_dssp ---HHTTTCTTST-TTTHHHHHHHH
T ss_pred ---HhCCCCCCCh-HHHHHHHHHHH
Confidence 3468998776 67888888775
No 48
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.78 E-value=6.3e-08 Score=93.76 Aligned_cols=235 Identities=14% Similarity=0.064 Sum_probs=152.4
Q ss_pred cCCCCEEEEeChHHHHHHHh------cCCCCCCeEEecCCCcCCCC----CCCC-------------------------C
Q 043412 122 CNRMDFVWVPTDFHVSTFIR------SGVDPAKVVKIVQPVHVGFF----DPVN-------------------------C 166 (383)
Q Consensus 122 ~~~ad~vi~~s~~~~~~~~~------~~~~~~~i~vi~ngid~~~~----~~~~-------------------------~ 166 (383)
+..++.|-.+|+...+.++. +..-++++.-|.|||+...+ .|.. .
T Consensus 411 i~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~ 490 (796)
T 1l5w_A 411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA 490 (796)
T ss_dssp HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred HHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcC
Confidence 57799999999999998874 22345689999999987655 2210 0
Q ss_pred CC------C-ccccCCcccc-----ccCCCCCCCCcEEEEEeeccccccCHHH-HHHHHHHHhc--cC-----CCeEEEE
Q 043412 167 DP------I-DLASIGKPVL-----GLSNMNTSSKEFVFLSVFKWEYRKGWDV-LLKAYLEEFS--KA-----DGVVLYL 226 (383)
Q Consensus 167 ~~------~-~~~~~~~~~l-----~~~~~~~~~~~~~i~~~g~~~~~K~~~~-ll~a~~~l~~--~~-----~~~~l~i 226 (383)
.. . ......+..+ ...++.++++.++++++.|+..+|+.++ ++..+.++.+ .. .++++++
T Consensus 491 ~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If 570 (796)
T 1l5w_A 491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLF 570 (796)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence 00 0 0000001110 0013456788999999999999999999 7887766653 12 3699999
Q ss_pred EeCCCCCCCchHHH---HHHHHh----hCCCCC--cc-----------ccccccCceEEecCC--CCCCChHHHHHHHcC
Q 043412 227 LTNPYHSGRDFGNK---IVNFVE----DSDLEK--PD-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMG 284 (383)
Q Consensus 227 ~G~~~~~~~~~~~~---~~~~~~----~~~~~~--~v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G 284 (383)
.|.+.+........ +.++++ .-.+.+ ++ ..++..||++++||+ .|++|++-|=+|..|
T Consensus 571 ~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG 650 (796)
T 1l5w_A 571 GAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650 (796)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT
T ss_pred EecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 99985432222111 333333 112223 22 366799999999999 999999999999999
Q ss_pred CCEEEcCCCCccccccC---CCceeeecccccccccCCCCcccccCCCHHHHHHH-------HHHHhcCHHHHHHHHHHH
Q 043412 285 LPVIATNWSGPTEYLTE---ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL-------MRLVVSNVDEAKAKGKQA 354 (383)
Q Consensus 285 ~PvI~~~~~g~~e~v~~---~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~-------i~~ll~~~~~~~~~~~~a 354 (383)
++.|++-.|...|+.++ +|||++.. +++++.+. ..-.-.+|+ .+++..++
T Consensus 651 aL~iGtLDGanvEi~e~vG~~NgF~FG~-------------------~~~ev~~l~~~~y~a~~~y~~~~~-~~~vvd~~ 710 (796)
T 1l5w_A 651 ALTVGTLDGANVEIAEKVGEENIFIFGH-------------------TVEQVKAILAKGYDPVKWRKKDKV-LDAVLKEL 710 (796)
T ss_dssp CEEEECSCTTHHHHHHHHCGGGSEECSC-------------------CHHHHHHHHHHCCCHHHHHHHCHH-HHHHHHHH
T ss_pred CeeecCcCCeeeehhhccCCCcEEEecC-------------------CHHHHHHHHHcccCHHHHhhcCHH-HHHHHHHH
Confidence 99999988887777643 46666643 56665532 222223553 44444443
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 355 REDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 355 ~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+...|||+.- .+|..+|+.++.
T Consensus 711 ---~~g~fs~~~~-~~y~~Ly~~L~~ 732 (796)
T 1l5w_A 711 ---ESGKYSDGDK-HAFDQMLHSIGK 732 (796)
T ss_dssp ---HHTTTTTTCT-TTTHHHHHHTST
T ss_pred ---HcCCCCCCcH-HHHHHHHHHHhc
Confidence 3468999775 778888887753
No 49
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.69 E-value=8.4e-08 Score=89.16 Aligned_cols=162 Identities=14% Similarity=0.058 Sum_probs=97.6
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|+.. .+..+.+.+++..+.. .++++++ +|.+.. .+....+..-+.-.+...+. .++..||++|.
T Consensus 254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~d~~v~ 327 (424)
T 2iya_A 254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVD--PADLGEVPPNVEVHQWVPQL-DILTKASAFIT 327 (424)
T ss_dssp SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSC--GGGGCSCCTTEEEESSCCHH-HHHTTCSEEEE
T ss_pred CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCC--hHHhccCCCCeEEecCCCHH-HHHhhCCEEEE
Confidence 4568888899876 3344444444444422 4677754 565421 11000010111112333343 68899999885
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
. +...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++.+ ..++++++++|.+++
T Consensus 328 ~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~~ll 387 (424)
T 2iya_A 328 H----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRD----------------QVTAEKLREAVLAVA 387 (424)
T ss_dssp C----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGG----------------GCCHHHHHHHHHHHH
T ss_pred C----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcC----------------CCCHHHHHHHHHHHH
Confidence 3 33479999999999999998742 2222322 444444321 128999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIK 376 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~ 376 (383)
+|++.++++.+.+++ +......+..++.+.++++
T Consensus 388 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 388 SDPGVAERLAAVRQE-IREAGGARAAADILEGILA 421 (424)
T ss_dssp HCHHHHHHHHHHHHH-HHTSCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-HHhcCcHHHHHHHHHHHHh
Confidence 999988888777666 3555566666666655543
No 50
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.53 E-value=2e-07 Score=86.38 Aligned_cols=156 Identities=12% Similarity=-0.068 Sum_probs=96.1
Q ss_pred CcEEEEEeecc-ccccCHHHHHHHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 189 KEFVFLSVFKW-EYRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 189 ~~~~i~~~g~~-~~~K~~~~ll~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+..++++.|++ ...+..+.+++++..+ +.+++++ |.+.... ..+.+.+.-.+...+ ..++..||++|.
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~----~~~~~~v~~~~~~~~-~~~l~~~d~~v~ 307 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLVL----PDDGADCFAIGEVNH-QVLFGRVAAVIH 307 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCCC----SSCGGGEEECSSCCH-HHHGGGSSEEEE
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCcccc----cCCCCCEEEeCcCCh-HHHHhhCCEEEe
Confidence 46788899998 4777888888888664 3456555 5442110 111111222333333 356799999996
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.+ ...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++.. ..+.++++++|.++
T Consensus 308 ~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~~l- 366 (415)
T 1iir_A 308 HG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGP----------------IPTFDSLSAALATA- 366 (415)
T ss_dssp CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSS----------------SCCHHHHHHHHHHH-
T ss_pred CC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcC----------------CCCHHHHHHHHHHH-
Confidence 43 3479999999999999998743 2333333 455544321 12899999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHIKDILS 380 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~~~ 380 (383)
+|++.++++.+.+++ +....-+++..+.++++++
T Consensus 367 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 367 LTPETHARATAVAGT-----IRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp TSHHHHHHHHHHHHH-----SCSCHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHH-----HhhcChHHHHHHHHHHHHh
Confidence 998877776665543 2334455555566665554
No 51
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.27 E-value=4.1e-07 Score=83.67 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=88.6
Q ss_pred CCcEEEEEeeccccccC-HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWEYRKG-WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~-~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
+...++++.|++...++ .+.+.+++..+.. .+..+++.+++.... ....+.+.+.-.+. -....++..+|++|.
T Consensus 236 ~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~--~~~~~~~~v~~~~~-~p~~~lL~~~~~~v~ 310 (400)
T 4amg_A 236 GRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLA--LLGELPANVRVVEW-IPLGALLETCDAIIH 310 (400)
T ss_dssp TCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCC--CCCCCCTTEEEECC-CCHHHHHTTCSEEEE
T ss_pred CCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCcccc--ccccCCCCEEEEee-cCHHHHhhhhhheec
Confidence 45678888888755433 3344444444432 356666665542211 00000000111111 123467789999884
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.+...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++ +.+..+++|++++
T Consensus 311 ----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~--------------------~~~~~~~al~~lL 366 (400)
T 4amg_A 311 ----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAE--------------------AGSLGAEQCRRLL 366 (400)
T ss_dssp ----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECC--------------------TTTCSHHHHHHHH
T ss_pred ----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcC--------------------CCCchHHHHHHHH
Confidence 345578999999999999977643 2222222 4444443 3344578899999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDH 374 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~ 374 (383)
+|++.+++..+-+.+ +...-+....++.++++
T Consensus 367 ~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~l 398 (400)
T 4amg_A 367 DDAGLREAALRVRQE-MSEMPPPAETAAXLVAL 398 (400)
T ss_dssp HCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHh
Confidence 999987776665554 46666777777666553
No 52
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.26 E-value=1.4e-06 Score=80.36 Aligned_cols=156 Identities=12% Similarity=-0.008 Sum_probs=93.6
Q ss_pred CCcEEEEEeeccc-cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEe
Q 043412 188 SKEFVFLSVFKWE-YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVL 266 (383)
Q Consensus 188 ~~~~~i~~~g~~~-~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ 266 (383)
++..++++.|+.. ..+.+..+++++..+ ++++++.++....... .....+.-.+..+ ...++..||++|.
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~~---~~~~~v~~~~~~~-~~~ll~~~d~~v~ 290 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGRI---DEGDDCLVVGEVN-HQVLFGRVAAVVH 290 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCCS---SCCTTEEEESSCC-HHHHGGGSSEEEE
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCcccccc---cCCCCEEEecCCC-HHHHHhhCcEEEE
Confidence 3467888889887 566677777777664 5677776554221100 0000111112222 2567899999995
Q ss_pred cCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 267 PSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 267 ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
.+ ...++.||+++|+|+|+....+. .+.+.+ +.|..++.. ..+.+++++++.+++
T Consensus 291 ~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~----------------~~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 291 HG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGP----------------TPTVESLSAALATAL 350 (404)
T ss_dssp CC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSS----------------SCCHHHHHHHHHHHT
T ss_pred CC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcC----------------CCCHHHHHHHHHHHh
Confidence 44 34789999999999999876432 122222 445444321 128999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 043412 342 SNVDEAKAKGKQAREDMIQRFSPETVAGIVTDHI 375 (383)
Q Consensus 342 ~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~ 375 (383)
+ ++.++++.+.+... .. -..+..++.+.+++
T Consensus 351 ~-~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 351 T-PGIRARAAAVAGTI-RT-DGTTVAAKLLLEAI 381 (404)
T ss_dssp S-HHHHHHHHHHHTTC-CC-CHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHHH-hh-hHHHHHHHHHHHHH
Confidence 8 88777766655432 22 34444555444443
No 53
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.23 E-value=4.9e-07 Score=83.74 Aligned_cols=137 Identities=12% Similarity=-0.025 Sum_probs=84.4
Q ss_pred CcEEEEEeeccc---cccCHHHHHHHHHHHhccCCCeEEEEE-eCCCCCCCchHHHHHHHHhhCCCCCccccccccCceE
Q 043412 189 KEFVFLSVFKWE---YRKGWDVLLKAYLEEFSKADGVVLYLL-TNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVF 264 (383)
Q Consensus 189 ~~~~i~~~g~~~---~~K~~~~ll~a~~~l~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~ 264 (383)
+..++++.|+.. ..+..+.+++++..+ +++++++ |.+... . ..+.+.+.-.+..+ ...++..||++
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~---~-~~~~~~v~~~~~~~-~~~ll~~~d~~ 306 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV---L-PDDRDDCFAIDEVN-FQALFRRVAAV 306 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC---C-SCCCTTEEEESSCC-HHHHGGGSSEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc---c-cCCCCCEEEeccCC-hHHHhccCCEE
Confidence 356788888874 456667777777654 3566665 544211 0 00000111112222 35677999999
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccccC-CCceeeecccccccccCCCCcccccCCCHHHHHHHHHH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRL 339 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ 339 (383)
|. .+...+++||+++|+|+|+.+..+ ..+.+.+ +.|..++.. ..+.++++++|.+
T Consensus 307 v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~----------------~~~~~~l~~~i~~ 366 (416)
T 1rrv_A 307 IH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGP----------------TPTFESLSAALTT 366 (416)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSS----------------CCCHHHHHHHHHH
T ss_pred Ee----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCC----------------CCCHHHHHHHHHH
Confidence 96 334569999999999999987632 2222322 444444321 2389999999999
Q ss_pred HhcCHHHHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQARE 356 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~ 356 (383)
+ +|++.++++.+.+++
T Consensus 367 l-~~~~~~~~~~~~~~~ 382 (416)
T 1rrv_A 367 V-LAPETRARAEAVAGM 382 (416)
T ss_dssp H-TSHHHHHHHHHHTTT
T ss_pred h-hCHHHHHHHHHHHHH
Confidence 9 999877777665443
No 54
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=97.70 E-value=9.9e-05 Score=73.29 Aligned_cols=228 Identities=14% Similarity=0.146 Sum_probs=118.6
Q ss_pred HhcCCCCEEEEeChHHHHHHHh-cCCCCCCeEEecCCCcCCCCCCCCCCCCccccCCccccccCCCCCCCCcEEEEEeec
Q 043412 120 KRCNRMDFVWVPTDFHVSTFIR-SGVDPAKVVKIVQPVHVGFFDPVNCDPIDLASIGKPVLGLSNMNTSSKEFVFLSVFK 198 (383)
Q Consensus 120 ~~~~~ad~vi~~s~~~~~~~~~-~~~~~~~i~vi~ngid~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~g~ 198 (383)
....+.|.+++.|+...+.+.+ ++.+++++..++.+-....+..............+ +++++++.+|+|.-.
T Consensus 474 ~~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~-------~~~~~~kk~ILyaPT 546 (729)
T 3l7i_A 474 RETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTH-------LNLPSDKKVIMYAPT 546 (729)
T ss_dssp HHHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHH-------TTCCSSCEEEEECCC
T ss_pred HhhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHH-------hCCCCCCeEEEEeee
Confidence 3457899999999999999888 78776677666554322222111111000001112 224678899999876
Q ss_pred ccccc----C-----HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHH-----HHHHHhhCCCCCccccccccCceE
Q 043412 199 WEYRK----G-----WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNK-----IVNFVEDSDLEKPDDGWAPAADVF 264 (383)
Q Consensus 199 ~~~~K----~-----~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~adi~ 264 (383)
+.... + ...-++.+.+.. .++..+++-.-. -.... +...+....-..++..++..||++
T Consensus 547 ~r~~~~~~~~~~~~~~~~~~~~l~~~l--~~~~~li~r~Hp-----~~~~~~~~~~~~~~~~~~~~~~di~~ll~~aD~l 619 (729)
T 3l7i_A 547 WRDDEFVSKGKYLFELKIDLDNLYKEL--GDDYVILLRMHY-----LISNALDLSGYENFAIDVSNYNDVSELFLISDCL 619 (729)
T ss_dssp CCGGGCCGGGSSCCCCTTCHHHHHHHH--TTTEEEEECCCH-----HHHTTCCCTTCTTTEEECTTCSCHHHHHHTCSEE
T ss_pred eeCCccccccccccchhhHHHHHHHHc--CCCeEEEEecCc-----chhccccccccCCcEEeCCCCcCHHHHHHHhCEE
Confidence 64421 1 111233333322 246777665321 00000 000000111124667899999999
Q ss_pred EecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCH
Q 043412 265 VLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNV 344 (383)
Q Consensus 265 v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~ 344 (383)
|.= ++-++.|++..++|||..... ..++..+..|+.++... ..+ |... .+.++|.++|.....++
T Consensus 620 ITD-----ySSv~fD~~~l~kPiif~~~D-~~~Y~~~~rg~y~d~~~---~~p----g~~~--~~~~eL~~~i~~~~~~~ 684 (729)
T 3l7i_A 620 ITD-----YSSVMFDYGILKRPQFFFAYD-IDKYDKGLRGFYMNYME---DLP----GPIY--TEPYGLAKELKNLDKVQ 684 (729)
T ss_dssp EES-----SCTHHHHHGGGCCCEEEECTT-TTTTTSSCCSBSSCTTS---SSS----SCEE--SSHHHHHHHHTTHHHHH
T ss_pred Eee-----chHHHHhHHhhCCCEEEecCC-HHHHhhccCCcccChhH---hCC----CCeE--CCHHHHHHHHhhhhccc
Confidence 832 456899999999999987542 33333333566555321 111 2221 28999999998876544
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 043412 345 DEAKAKGKQAREDMIQRFSPETVAGIVTDHIKD 377 (383)
Q Consensus 345 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 377 (383)
+...+..++-++.. -.|+-...++++.+.+-+
T Consensus 685 ~~~~~~~~~~~~~~-~~~~dg~as~ri~~~i~~ 716 (729)
T 3l7i_A 685 QQYQEKIDAFYDRF-CSVDNGKASQYIGDLIHK 716 (729)
T ss_dssp HHTHHHHHHHHHHH-STTCCSCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHh-CCccCChHHHHHHHHHHh
Confidence 33332222222211 123333555666555543
No 55
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.37 E-value=0.00098 Score=62.16 Aligned_cols=143 Identities=13% Similarity=0.045 Sum_probs=76.2
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhh----CCCCCccccccc--cC
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVED----SDLEKPDDGWAP--AA 261 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~--~a 261 (383)
+...++++.|..... ..+.+.+++..+... +++++++.+... .....+.+.+.... .+...+ ..++. ++
T Consensus 270 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~-~~~l~~~~~~~~~~~~~v~~w~pq-~~vL~h~~~ 344 (456)
T 2c1x_A 270 PTSVVYISFGTVTTP-PPAEVVALSEALEAS--RVPFIWSLRDKA-RVHLPEGFLEKTRGYGMVVPWAPQ-AEVLAHEAV 344 (456)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHH--TCCEEEECCGGG-GGGSCTTHHHHHTTTEEEESCCCH-HHHHTSTTE
T ss_pred CcceEEEecCccccC-CHHHHHHHHHHHHhc--CCeEEEEECCcc-hhhCCHHHHhhcCCceEEecCCCH-HHHhcCCcC
Confidence 456888888876532 234443444333222 355555443211 00111122221111 122222 24556 56
Q ss_pred ceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCcc----ccc-cC-CCceeeecccccccccCCCCcccccCCCHHHHHH
Q 043412 262 DVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPT----EYL-TE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRA 335 (383)
Q Consensus 262 di~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~----e~v-~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~ 335 (383)
|++| ..+...+++||+++|+|+|+-+..+-- ..+ +. +.|..++. ..-+.+++.+
T Consensus 345 ~~fv----th~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~----------------~~~~~~~l~~ 404 (456)
T 2c1x_A 345 GAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG----------------GVFTKSGLMS 404 (456)
T ss_dssp EEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG----------------GSCCHHHHHH
T ss_pred CEEE----ecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecC----------------CCcCHHHHHH
Confidence 7777 334567999999999999999763211 111 12 33332221 1128999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHH
Q 043412 336 LMRLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 336 ~i~~ll~~~~~~~~~~~~a~~ 356 (383)
+++++++|++ .++|.+++++
T Consensus 405 ~i~~ll~~~~-~~~~r~~a~~ 424 (456)
T 2c1x_A 405 CFDQILSQEK-GKKLRENLRA 424 (456)
T ss_dssp HHHHHHHSHH-HHHHHHHHHH
T ss_pred HHHHHHCCCc-HHHHHHHHHH
Confidence 9999999985 4556666555
No 56
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.15 E-value=0.0026 Score=59.83 Aligned_cols=150 Identities=13% Similarity=0.056 Sum_probs=78.0
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCC--CCC-chHHHHHHHHhhC----CCCCcccccccc
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYH--SGR-DFGNKIVNFVEDS----DLEKPDDGWAPA 260 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~--~~~-~~~~~~~~~~~~~----~~~~~v~~~~~~ 260 (383)
+...++++.|.... ...+.+.+.+..+.. .+.+++++.+... ... ...+.+.+..... +...+. .+++.
T Consensus 294 ~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~--~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~-~~L~h 369 (482)
T 2pq6_A 294 PGSVVYVNFGSTTV-MTPEQLLEFAWGLAN--CKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD-KVLNH 369 (482)
T ss_dssp TTCEEEEECCSSSC-CCHHHHHHHHHHHHH--TTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH-HHHTS
T ss_pred CCceEEEecCCccc-CCHHHHHHHHHHHHh--cCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH-HHhcC
Confidence 45678888887642 233444444444422 2467766644311 000 0122222222111 222222 46666
Q ss_pred CceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCccccc-CCCHHHHHHHHHH
Q 043412 261 ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWA-EPSVDKLRALMRL 339 (383)
Q Consensus 261 adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~la~~i~~ 339 (383)
+++-++-+ .+...+++||+++|+|+|+-+..+ |.. .|+..+. ...+.|+.+. ..+.+++.++|++
T Consensus 370 ~~~~~~vt--h~G~~s~~Eal~~GvP~i~~P~~~--dQ~--~na~~~~--------~~~G~g~~l~~~~~~~~l~~~i~~ 435 (482)
T 2pq6_A 370 PSIGGFLT--HCGWNSTTESICAGVPMLCWPFFA--DQP--TDCRFIC--------NEWEIGMEIDTNVKREELAKLINE 435 (482)
T ss_dssp TTEEEEEE--CCCHHHHHHHHHHTCCEEECCCST--THH--HHHHHHH--------HTSCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCCEEEe--cCCcchHHHHHHcCCCEEecCccc--chH--HHHHHHH--------HHhCEEEEECCCCCHHHHHHHHHH
Confidence 56522222 345679999999999999998742 110 1111110 0012233332 1389999999999
Q ss_pred HhcCHHHHHHHHHHHHH
Q 043412 340 VVSNVDEAKAKGKQARE 356 (383)
Q Consensus 340 ll~~~~~~~~~~~~a~~ 356 (383)
+++|++ .++|.+++++
T Consensus 436 ll~~~~-~~~~r~~a~~ 451 (482)
T 2pq6_A 436 VIAGDK-GKKMKQKAME 451 (482)
T ss_dssp HHTSHH-HHHHHHHHHH
T ss_pred HHcCCc-HHHHHHHHHH
Confidence 999986 3556666655
No 57
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=96.96 E-value=0.0048 Score=57.23 Aligned_cols=145 Identities=12% Similarity=0.042 Sum_probs=75.8
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC----CCCCccccccccCce
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS----DLEKPDDGWAPAADV 263 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~adi 263 (383)
+...++++.|..... ..+.+.+.+..+... +.+++++-+... .....+.+.+..... +...+ ..+++.+++
T Consensus 272 ~~~vVyvsfGS~~~~-~~~~~~el~~~l~~~--~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv~w~Pq-~~vL~h~~v 346 (454)
T 3hbf_A 272 NSSVVYISFGSVVTP-PPHELTALAESLEEC--GFPFIWSFRGDP-KEKLPKGFLERTKTKGKIVAWAPQ-VEILKHSSV 346 (454)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHHH--CCCEEEECCSCH-HHHSCTTHHHHTTTTEEEESSCCH-HHHHHSTTE
T ss_pred CCceEEEecCCCCcC-CHHHHHHHHHHHHhC--CCeEEEEeCCcc-hhcCCHhHHhhcCCceEEEeeCCH-HHHHhhcCc
Confidence 456788888876532 233344444333222 456666544310 000011111111111 12122 366688885
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----cccccC--CCceeeecccccccccCCCCcccccCCCHHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEYLTE--ENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALM 337 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~v~~--~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i 337 (383)
.++-++ +.-.+++||+++|+|+|+-+..+- ...+.+ +.|..++.+ ..+.+++.+++
T Consensus 347 ~~fvtH--~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~----------------~~~~~~l~~av 408 (454)
T 3hbf_A 347 GVFLTH--SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG----------------VLTKESIKKAL 408 (454)
T ss_dssp EEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG----------------SCCHHHHHHHH
T ss_pred CeEEec--CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC----------------CCCHHHHHHHH
Confidence 444343 345699999999999999886321 111111 333322211 13899999999
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 043412 338 RLVVSNVDEAKAKGKQARE 356 (383)
Q Consensus 338 ~~ll~~~~~~~~~~~~a~~ 356 (383)
++++++++ .++|.+++++
T Consensus 409 ~~ll~~~~-~~~~r~~a~~ 426 (454)
T 3hbf_A 409 ELTMSSEK-GGIMRQKIVK 426 (454)
T ss_dssp HHHHSSHH-HHHHHHHHHH
T ss_pred HHHHCCCh-HHHHHHHHHH
Confidence 99998853 3445555544
No 58
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=96.95 E-value=0.0088 Score=58.44 Aligned_cols=121 Identities=15% Similarity=0.038 Sum_probs=86.5
Q ss_pred CCcEEEEEeeccccccCHHH-HHHHH---HHHhcc-------------CCCeEEEEEeCCCCCCCchHHHHHHHHhhC--
Q 043412 188 SKEFVFLSVFKWEYRKGWDV-LLKAY---LEEFSK-------------ADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-- 248 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~-ll~a~---~~l~~~-------------~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-- 248 (383)
++.+..+++-|+.++|...+ ++..+ .+++.. ..++++++.|...+.. ...+.+.+++...
T Consensus 598 p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~ 676 (879)
T 1ygp_A 598 DDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGY-YMAKLIIKLINCVAD 676 (879)
T ss_dssp GGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHH
T ss_pred CCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHH
Confidence 78999999999999999888 55554 344333 3568888888764422 2223333333222
Q ss_pred ------CCCCc--c-----------ccccccCceEEecCC--CCCCChHHHHHHHcCCCEEEcCCCCccccccC---CCc
Q 043412 249 ------DLEKP--D-----------DGWAPAADVFVLPSR--GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE---ENG 304 (383)
Q Consensus 249 ------~~~~~--v-----------~~~~~~adi~v~ps~--~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~---~~g 304 (383)
.+.+. | ..++.+||+-...|. .|..|.+=|-+|..|.+.|+|-.|...|+.++ +|+
T Consensus 677 ~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~ 756 (879)
T 1ygp_A 677 IVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNV 756 (879)
T ss_dssp HHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGS
T ss_pred HhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCcccE
Confidence 12221 1 356699999998886 69999999999999999999999988888754 489
Q ss_pred eeeec
Q 043412 305 YPLLV 309 (383)
Q Consensus 305 ~~~~~ 309 (383)
|++..
T Consensus 757 fiFG~ 761 (879)
T 1ygp_A 757 FLFGN 761 (879)
T ss_dssp EEESC
T ss_pred EEccC
Confidence 88864
No 59
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.72 E-value=0.0029 Score=54.68 Aligned_cols=89 Identities=7% Similarity=-0.061 Sum_probs=58.0
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC------CCCCccccccccCce
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS------DLEKPDDGWAPAADV 263 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~adi 263 (383)
+.++++.|..++..-...+++++.. ... -.+++|.+. ...+.+++..... +..+++..+|+.||+
T Consensus 158 ~~ILv~~GG~d~~~l~~~vl~~L~~----~~~-i~vv~G~~~----~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl 228 (282)
T 3hbm_A 158 YDFFICMGGTDIKNLSLQIASELPK----TKI-ISIATSSSN----PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK 228 (282)
T ss_dssp EEEEEECCSCCTTCHHHHHHHHSCT----TSC-EEEEECTTC----TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE
T ss_pred CeEEEEECCCchhhHHHHHHHHhhc----CCC-EEEEECCCc----hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE
Confidence 5667777776554333344444422 223 345566652 3456666655432 334788999999999
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+|.+ .|.++.|++++|+|.|..+.
T Consensus 229 vI~~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 229 LIIS-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEE-----SSHHHHHHHHTTCCEEEECC
T ss_pred EEEC-----CcHHHHHHHHcCCCEEEEeC
Confidence 9973 25899999999999988764
No 60
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=96.38 E-value=0.047 Score=50.88 Aligned_cols=139 Identities=15% Similarity=0.105 Sum_probs=72.4
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHH--hhC----CCCCccccccc--
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFV--EDS----DLEKPDDGWAP-- 259 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~--~~~----~~~~~v~~~~~-- 259 (383)
+...++++.|.....-+.+.+.+++..+.. .+.+++++.+.. .....+.+.+.. ... +...+. .++.
T Consensus 275 ~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~--~~~~~l~~~~~~--~~~l~~~~~~~~~~~~~~~v~~w~pq~-~vL~h~ 349 (463)
T 2acv_A 275 DKSVVFLCFGSMGVSFGPSQIREIALGLKH--SGVRFLWSNSAE--KKVFPEGFLEWMELEGKGMICGWAPQV-EVLAHK 349 (463)
T ss_dssp TTCEEEEECCSSCCCCCHHHHHHHHHHHHH--HTCEEEEECCCC--GGGSCTTHHHHHHHHCSEEEESSCCHH-HHHHST
T ss_pred CCceEEEEeccccccCCHHHHHHHHHHHHh--CCCcEEEEECCC--cccCChhHHHhhccCCCEEEEccCCHH-HHhCCC
Confidence 456888888887522233334344433322 246776665431 001112222222 111 122332 3454
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCc----ccc-ccC-CCceee-ecccccccccCCCCccccc--CCCH
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGP----TEY-LTE-ENGYPL-LVGRMSEVTEGPFKGHFWA--EPSV 330 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~----~e~-v~~-~~g~~~-~~~~~~~~~~~~~~g~~~~--~~~~ 330 (383)
++|+|| ..+...+++||+++|+|+|+-+..+- ... +.. +.|..+ ... . -. ..+.
T Consensus 350 ~~~~fv----th~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~---------~----~~~~~~~~ 412 (463)
T 2acv_A 350 AIGGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDY---------R----KGSDVVAA 412 (463)
T ss_dssp TEEEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSC---------C----TTCCCCCH
T ss_pred ccCeEE----ecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEeccc---------C----CCCccccH
Confidence 567777 33456799999999999999977321 112 222 333333 100 0 01 2389
Q ss_pred HHHHHHHHHHhc-CHHHHH
Q 043412 331 DKLRALMRLVVS-NVDEAK 348 (383)
Q Consensus 331 ~~la~~i~~ll~-~~~~~~ 348 (383)
+++.++|+++++ +++.++
T Consensus 413 ~~l~~ai~~ll~~~~~~r~ 431 (463)
T 2acv_A 413 EEIEKGLKDLMDKDSIVHK 431 (463)
T ss_dssp HHHHHHHHHHTCTTCTHHH
T ss_pred HHHHHHHHHHHhccHHHHH
Confidence 999999999997 344433
No 61
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=96.24 E-value=0.052 Score=50.83 Aligned_cols=137 Identities=8% Similarity=0.016 Sum_probs=72.4
Q ss_pred CCcEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCC-----------CCc----hHHHHHHHHhhCCC--
Q 043412 188 SKEFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHS-----------GRD----FGNKIVNFVEDSDL-- 250 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~-----------~~~----~~~~~~~~~~~~~~-- 250 (383)
+...++++.|.... ...+.+.+.+..+.. .+.+++++.+.... +.. ..+.+.+..+..|+
T Consensus 267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v 343 (480)
T 2vch_A 267 LGSVLYVSFGSGGT-LTCEQLNELALGLAD--SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343 (480)
T ss_dssp TTCEEEEECTTTCC-CCHHHHHHHHHHHHH--TTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEE
T ss_pred CCceEEEecccccC-CCHHHHHHHHHHHHh--cCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEE
Confidence 45788888898743 234444444444432 24566665443210 011 11223322222221
Q ss_pred ---CCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCC----ccccc-cC-CCceeeecccccccccCCCC
Q 043412 251 ---EKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSG----PTEYL-TE-ENGYPLLVGRMSEVTEGPFK 321 (383)
Q Consensus 251 ---~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g----~~e~v-~~-~~g~~~~~~~~~~~~~~~~~ 321 (383)
..+ ..+++.+++.++-+. +.-.+++||+++|+|+|+-+..+ ....+ .. +.|..++.. .
T Consensus 344 ~~w~Pq-~~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~----------~ 410 (480)
T 2vch_A 344 PFWAPQ-AQVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG----------D 410 (480)
T ss_dssp ESCCCH-HHHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC----------T
T ss_pred eCccCH-HHHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecc----------c
Confidence 122 256677775333332 44579999999999999988732 11221 22 344333211 0
Q ss_pred cccccCCCHHHHHHHHHHHhcC
Q 043412 322 GHFWAEPSVDKLRALMRLVVSN 343 (383)
Q Consensus 322 g~~~~~~~~~~la~~i~~ll~~ 343 (383)
+ ...+.++++++|++++++
T Consensus 411 ~---~~~~~~~l~~av~~vl~~ 429 (480)
T 2vch_A 411 D---GLVRREEVARVVKGLMEG 429 (480)
T ss_dssp T---SCCCHHHHHHHHHHHHTS
T ss_pred C---CccCHHHHHHHHHHHhcC
Confidence 0 023899999999999983
No 62
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.02 E-value=0.069 Score=47.47 Aligned_cols=94 Identities=12% Similarity=0.084 Sum_probs=60.6
Q ss_pred CCcEEEEEeec-cccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC---------CCC----
Q 043412 188 SKEFVFLSVFK-WEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS---------DLE---- 251 (383)
Q Consensus 188 ~~~~~i~~~g~-~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---------~~~---- 251 (383)
++.++.+..|. ..+.|.+ +.+.++++.|.++ ++++++.|+. ...+..++..+.. .+.
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~-----~e~~~~~~i~~~~~~~~~~~~~~l~g~~s 251 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSA-----KDHEAGNEILAALNTEQQAWCRNLAGETQ 251 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCG-----GGHHHHHHHHTTSCHHHHTTEEECTTTSC
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeCh-----hhHHHHHHHHHhhhhccccceEeccCcCC
Confidence 34577777776 5466665 4788888888665 7889998865 2233333333221 111
Q ss_pred -CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 252 -KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 252 -~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
.++..+++.||++|.... | .+-.|.++|+|+|+--.+
T Consensus 252 l~e~~ali~~a~l~I~~Ds----g-~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 252 LDQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVALYGP 289 (348)
T ss_dssp HHHHHHHHHTSSEEEEESS----H-HHHHHHHTTCCEEEEESS
T ss_pred HHHHHHHHHhCCEEEecCC----H-HHHHHHHcCCCEEEEECC
Confidence 345688899999998752 3 334499999999986543
No 63
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=94.97 E-value=0.071 Score=44.08 Aligned_cols=41 Identities=10% Similarity=0.187 Sum_probs=33.2
Q ss_pred CCCCccccccc-cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 249 DLEKPDDGWAP-AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 249 ~~~~~v~~~~~-~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
++.+++..+++ .||++|. -+...+++|++++|+|.|.-+..
T Consensus 120 ~f~~~m~~~l~~~AdlvIs----haGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 120 DFSTKMQSIIRDYSDLVIS----HAGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp CSSSSHHHHHHHHCSCEEE----SSCHHHHHHHHHTTCCCCEECCS
T ss_pred eccchHHHHHHhcCCEEEE----CCcHHHHHHHHHhCCCEEEEcCc
Confidence 44477788899 9999993 34567999999999998887764
No 64
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=93.46 E-value=0.19 Score=44.83 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=62.6
Q ss_pred CcEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC-----C-----Ccccc
Q 043412 189 KEFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL-----E-----KPDDG 256 (383)
Q Consensus 189 ~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~-----~-----~~v~~ 256 (383)
+..+.+..|.-.+.|.+ +.+.+++..+.++ +.++++.|+. ...+..++.....+. . .++..
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~-----~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~a 257 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGP-----MDLEMVQPVVEQMETKPIVATGKFQLGPLAA 257 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCT-----TTHHHHHHHHHTCSSCCEECTTCCCHHHHHH
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCc-----chHHHHHHHHHhcccccEEeeCCCCHHHHHH
Confidence 45667777764456654 5788888877765 5678888764 223344444433321 1 23567
Q ss_pred ccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccc
Q 043412 257 WAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYL 299 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v 299 (383)
+++.||++|.... |..-+ |.++|+|+|+--.+..+...
T Consensus 258 li~~a~~~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 258 AMNRCNLLITNDS----GPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp HHHTCSEEEEESS----HHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred HHHhCCEEEECCC----CHHHH-HHhcCCCEEEEECCCCcccc
Confidence 8899999997642 44444 99999999997554444443
No 65
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=92.25 E-value=0.57 Score=41.08 Aligned_cols=134 Identities=10% Similarity=0.040 Sum_probs=75.1
Q ss_pred CCcEEEEEeeccccccCH--HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCC---CC-----Cccccc
Q 043412 188 SKEFVFLSVFKWEYRKGW--DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSD---LE-----KPDDGW 257 (383)
Q Consensus 188 ~~~~~i~~~g~~~~~K~~--~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~---~~-----~~v~~~ 257 (383)
++..+.+..|.-.+.|.+ +.+.+.++.|.++ +.++++.++++ ...+..++..+..+ +. .++..+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~----~e~~~~~~i~~~~~~~~l~g~~sl~el~al 250 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAP----HEEERAKRLAEGFAYVEVLPKMSLEGVARV 250 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSH----HHHHHHHHHHTTCTTEEECCCCCHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCH----HHHHHHHHHHhhCCcccccCCCCHHHHHHH
Confidence 445677777765555654 4777888777543 67888874331 22233333333221 11 245677
Q ss_pred cccCceEEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccC-C-CceeeecccccccccCCCCcccccCCCHHHHHH
Q 043412 258 APAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTE-E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRA 335 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~-~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~ 335 (383)
++.||++|.... |..=+ |.|+|+|+|+--.+..+..... + +...+... ..-...-+++++.+
T Consensus 251 i~~a~l~I~~DS----G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~-----------~~cm~~I~~~~V~~ 314 (326)
T 2gt1_A 251 LAGAKFVVSVDT----GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP-----------GNELSQLTANAVKQ 314 (326)
T ss_dssp HHTCSEEEEESS----HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG-----------GGCGGGCCHHHHHH
T ss_pred HHhCCEEEecCC----cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC-----------cccccCCCHHHHHH
Confidence 899999997742 44444 7779999998743332322221 1 11111100 01122338889999
Q ss_pred HHHHHhcC
Q 043412 336 LMRLVVSN 343 (383)
Q Consensus 336 ~i~~ll~~ 343 (383)
++.++++.
T Consensus 315 ~i~~~l~~ 322 (326)
T 2gt1_A 315 FIEENAEK 322 (326)
T ss_dssp HHHHTTTT
T ss_pred HHHHHHHH
Confidence 99888764
No 66
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=77.95 E-value=10 Score=32.05 Aligned_cols=88 Identities=11% Similarity=0.079 Sum_probs=53.1
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCC
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~ 269 (383)
..+|++++.-.. -.-..+.++++++++. ++.+.++|-|.. ..-.+.++.++...+-... ..++++..|.-
T Consensus 108 ~rIIlf~ds~~~-~~~~~l~~lak~lkk~--gI~v~vIgFG~~--~~n~~kLe~l~~~~Ng~~~-----~~s~~v~v~~g 177 (268)
T 4b4t_W 108 QRIVAFVCSPIS-DSRDELIRLAKTLKKN--NVAVDIINFGEI--EQNTELLDEFIAAVNNPQE-----ETSHLLTVTPG 177 (268)
T ss_dssp EEEEEEECSCCS-SCHHHHHHHHHHHHHH--TEEEEEEEESSC--CSSCCHHHHHHHHHCSSTT-----TSCEEEEECCC
T ss_pred eEEEEEECCCCC-CCHHHHHHHHHHHHHc--CCEEEEEEeCCC--ccchHHHHHHHHHhcCCCC-----CceeEEEeCCC
Confidence 345555544322 3556788888888765 778888887743 2234566777666543211 36677777752
Q ss_pred CCCCChHHHHHHHcCCCEEEcCC
Q 043412 270 GEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 270 ~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+..+.+.+.. .||+.-+.
T Consensus 178 ----~~~lsd~l~~-s~i~~~~~ 195 (268)
T 4b4t_W 178 ----PRLLYENIAS-SPIILEEG 195 (268)
T ss_dssp ----SSCHHHHHHT-STTSCCCC
T ss_pred ----CccHHHHHhc-CCccccCC
Confidence 4456777766 77776543
No 67
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=71.83 E-value=13 Score=26.38 Aligned_cols=67 Identities=13% Similarity=0.215 Sum_probs=37.5
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccCceEEecCCCCCCChHHHHHHH--cCCCEEEcCC
Q 043412 224 LYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMS--MGLPVIATNW 292 (383)
Q Consensus 224 l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a--~G~PvI~~~~ 292 (383)
++++|.|.... -....+++.+.+.|+. .++......+|+++.+..... -..-++..+ .++||+.-+.
T Consensus 8 lvvC~~G~~TS-ll~~kl~~~~~~~gi~~~i~~~~~~~~~~~~~~~D~Ii~t~~l~~-~~~~~~~~~~~~~~pv~~I~~ 84 (109)
T 2l2q_A 8 LLVCGAGMSTS-MLVQRIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRF-NKKRLEEITKPKGIPIEIINT 84 (109)
T ss_dssp EEESSSSCSSC-HHHHHHHHHHHHHTCSEEEEEECSTTHHHHTTTCSEEEECSCCSS-HHHHHHHHHHHHTCCEEECCH
T ss_pred EEECCChHhHH-HHHHHHHHHHHHCCCCeEEEEecHHHHHhhcCCCCEEEECCccHH-HHHHHHHHhcccCCCEEEECh
Confidence 34444444333 4446677777776653 223344568899887764321 133334332 5899987664
No 68
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=59.02 E-value=8.5 Score=30.74 Aligned_cols=72 Identities=21% Similarity=0.223 Sum_probs=40.3
Q ss_pred ccccCceEEecCCCCCCCh--HHHHHHHcCCCEEEcCCCC-ccccccC--CCc-eeeecccccccccCCCCcccccCCCH
Q 043412 257 WAPAADVFVLPSRGEGWGR--PLVEAMSMGLPVIATNWSG-PTEYLTE--ENG-YPLLVGRMSEVTEGPFKGHFWAEPSV 330 (383)
Q Consensus 257 ~~~~adi~v~ps~~e~~~~--~~~Ea~a~G~PvI~~~~~g-~~e~v~~--~~g-~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (383)
+...||.+|... .++|. .+.||+..|+||++-+..+ ..+.+.. ..| ++-+ . ....+.-..|+
T Consensus 115 m~~~sda~Ivlp--GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~-~---------~~~~i~~~~~~ 182 (195)
T 1rcu_A 115 LLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDN-R---------RIVEIHQAWTV 182 (195)
T ss_dssp HHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSST-T---------CCSCEEEESSH
T ss_pred HHHhCCEEEEec--CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCH-H---------HcCeEEEeCCH
Confidence 336788766432 23443 5888999999999997543 3333322 122 2111 1 11222233388
Q ss_pred HHHHHHHHHH
Q 043412 331 DKLRALMRLV 340 (383)
Q Consensus 331 ~~la~~i~~l 340 (383)
+++.+.|.++
T Consensus 183 ee~~~~l~~~ 192 (195)
T 1rcu_A 183 EEAVQIIEQI 192 (195)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 69
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=56.88 E-value=18 Score=31.05 Aligned_cols=70 Identities=16% Similarity=0.101 Sum_probs=47.1
Q ss_pred ccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 217 SKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 217 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.+.++++++-+.+. ..+..++..+..+.. +++..++...|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 27 ~~~~~~~l~av~d~------~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP 98 (308)
T 3uuw_A 27 TKSERFEFVGAFTP------NKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEIIKILLNLGVHVYVDKP 98 (308)
T ss_dssp TSCSSSEEEEEECS------CHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHHHHHHHTTCEEEECSS
T ss_pred HhCCCeEEEEEECC------CHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHHHHHHCCCcEEEcCC
Confidence 34578888866543 234455566665553 55666777899988877544444467889999999998643
No 70
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=56.79 E-value=78 Score=25.69 Aligned_cols=87 Identities=6% Similarity=0.008 Sum_probs=46.8
Q ss_pred HHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC----CccccccccCceEEecCCCCCCChHHHHHHH
Q 043412 207 VLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE----KPDDGWAPAADVFVLPSRGEGWGRPLVEAMS 282 (383)
Q Consensus 207 ~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a 282 (383)
.....+..|.+... .+.++-. ...+.+..++...++. +--...+..+|+++..+-.+.....+.++.-
T Consensus 42 va~~ka~~Ll~~GA--~VtVvap------~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak 113 (223)
T 3dfz_A 42 IATRRIKGFLQEGA--AITVVAP------TVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK 113 (223)
T ss_dssp HHHHHHHHHGGGCC--CEEEECS------SCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC
T ss_pred HHHHHHHHHHHCCC--EEEEECC------CCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh
Confidence 44555556655543 4445432 2235566666654442 1113456789988877654444445555555
Q ss_pred cCCCEEEcCCCCccccccC
Q 043412 283 MGLPVIATNWSGPTEYLTE 301 (383)
Q Consensus 283 ~G~PvI~~~~~g~~e~v~~ 301 (383)
.|+||-+.+.+...+++-.
T Consensus 114 ~gi~VNvvD~p~~~~f~~P 132 (223)
T 3dfz_A 114 NDQLVNMASSFSDGNIQIP 132 (223)
T ss_dssp TTCEEEC-----CCSEECC
T ss_pred CCCEEEEeCCcccCeEEEe
Confidence 8999999888776666643
No 71
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=53.67 E-value=15 Score=26.18 Aligned_cols=14 Identities=7% Similarity=0.311 Sum_probs=9.7
Q ss_pred CHHHHHHHHHHHhc
Q 043412 329 SVDKLRALMRLVVS 342 (383)
Q Consensus 329 ~~~~la~~i~~ll~ 342 (383)
|.+.+.+.+.+++.
T Consensus 99 d~~~i~~~i~~~l~ 112 (113)
T 1tvm_A 99 GIEALQNKILTILQ 112 (113)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 67777777776653
No 72
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=52.99 E-value=36 Score=26.15 Aligned_cols=37 Identities=24% Similarity=0.112 Sum_probs=23.8
Q ss_pred cccccCceEEecCC-CCCCChHHHH---HHHcCCCEEEcCC
Q 043412 256 GWAPAADVFVLPSR-GEGWGRPLVE---AMSMGLPVIATNW 292 (383)
Q Consensus 256 ~~~~~adi~v~ps~-~e~~~~~~~E---a~a~G~PvI~~~~ 292 (383)
..+..||++|.--. .+.-.-+.+| |.+.|+||++-..
T Consensus 65 ~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~ 105 (162)
T 3ehd_A 65 ENVLASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYT 105 (162)
T ss_dssp HHHHTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEc
Confidence 45689999886432 2222334555 6889999988743
No 73
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=51.26 E-value=23 Score=30.91 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=47.4
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.|+++++-+.+. ..+..+++++++++. .++..+++ ..|+++.++-...-.-.+.+|+.+|++|++=.-
T Consensus 46 ~~~~~lvav~d~------~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKP 118 (350)
T 4had_A 46 AENCVVTAIASR------DLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKP 118 (350)
T ss_dssp CSSEEEEEEECS------SHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred CCCeEEEEEECC------CHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEeCC
Confidence 578999877753 245667777777764 45566664 478888776543333467899999999998654
No 74
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=51.12 E-value=32 Score=30.49 Aligned_cols=60 Identities=5% Similarity=-0.078 Sum_probs=38.6
Q ss_pred hHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHHHHHHhcCHHHHHHHH
Q 043412 275 RPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVVSNVDEAKAKG 351 (383)
Q Consensus 275 ~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll~~~~~~~~~~ 351 (383)
=++.+|+.+|+-.|.-..+...+++..+.-+-++ + -.+++++|+.|..|-+|++.+.++-
T Consensus 249 EK~~~al~~g~VPI~~G~~~~~~~~Pp~SfI~~~--d---------------F~s~~~La~yL~~L~~n~~~Y~~y~ 308 (371)
T 2nzw_A 249 EKIIDAYFSHTIPIYWGSPSVAKDFNPKSFVNVH--D---------------FKNFDEAIDYIKYLHTHKNAYLDML 308 (371)
T ss_dssp THHHHHHHTTCEEEEESCTTGGGTSCGGGSEEGG--G---------------SSSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHhCCeEEEEECCCchhhhCCCCceEEcc--c---------------CCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 3788999999644443334445555432111111 0 1189999999999999999887654
No 75
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=48.38 E-value=41 Score=29.39 Aligned_cols=70 Identities=7% Similarity=0.081 Sum_probs=46.2
Q ss_pred ccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Ccccccc--ccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 217 SKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWA--PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 217 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~--~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.+.++++++-+.+. ..+..+..++..++. .++..++ ...|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 25 ~~~~~~~lvav~d~------~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP 98 (354)
T 3db2_A 25 TKSEKLKLVTCYSR------TEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKP 98 (354)
T ss_dssp TTCSSEEEEEEECS------SHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHHHHHHTTCEEEEESS
T ss_pred HhCCCcEEEEEECC------CHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCEEEEccC
Confidence 34578888866553 234455555555553 5566777 5689888776544334467889999999998654
No 76
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=47.51 E-value=82 Score=27.30 Aligned_cols=67 Identities=13% Similarity=-0.022 Sum_probs=44.7
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
++++++-+.+. ..+..++..+.++.. .++..+++ ..|+++..+-...-.-.+.+|+..|++|++-.-
T Consensus 43 ~~~~lvav~d~------~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP 114 (340)
T 1zh8_A 43 HLFEITAVTSR------TRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKP 114 (340)
T ss_dssp TTEEEEEEECS------SHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred CceEEEEEEcC------CHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCC
Confidence 67888777653 244555666666652 45566664 589888776543333467789999999998653
No 77
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=47.35 E-value=28 Score=27.83 Aligned_cols=56 Identities=7% Similarity=0.074 Sum_probs=38.0
Q ss_pred chHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 236 DFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.....+.++++.+|.. -...+-..+.-+|.......-..+.+.|++.|++||..++
T Consensus 13 ~~~~~l~~~~~~~G~~-~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~W 68 (210)
T 2nte_A 13 EQQKMLSELAVILKAK-KYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEW 68 (210)
T ss_dssp HHHHHHHHHHHHTTCE-EESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHH
T ss_pred HHHHHHHHHHHHcCCE-EeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHH
Confidence 5567788999998873 1123334566666654222335789999999999998876
No 78
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=47.30 E-value=42 Score=29.60 Aligned_cols=67 Identities=9% Similarity=-0.004 Sum_probs=45.3
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.+.+++-+.+. ..+..+..+++++.. .++..+++ ..|+++..+-...-.-.+.+|+.+|++|++=.-
T Consensus 36 ~~~~l~av~d~------~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKP 107 (390)
T 4h3v_A 36 LHPDLNVLCGR------DAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKP 107 (390)
T ss_dssp SEEEEEEEECS------SHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred cCceEEEEEcC------CHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceeecC
Confidence 45677777753 245666777777764 45566664 468777766443333468899999999998764
No 79
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=46.86 E-value=36 Score=29.80 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=44.3
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
++++++-+.+. ..+..+...+..++. .++..+++ ..|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 37 ~~~~lvav~d~------~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP 107 (354)
T 3q2i_A 37 DRAELIDVCDI------DPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKP 107 (354)
T ss_dssp TTEEEEEEECS------SHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSS
T ss_pred CCeEEEEEEcC------CHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCC
Confidence 68888766543 234555566666653 45566665 789888776543333457889999999998653
No 80
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=46.57 E-value=55 Score=29.67 Aligned_cols=68 Identities=12% Similarity=0.035 Sum_probs=45.5
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-------Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEE
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-------KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVI 288 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI 288 (383)
+.++++++-+.+. ..+..+...+.++.. +++..++. ..|+++..+-...-.-.+.+|+..|++|+
T Consensus 105 ~~~~~~lvav~d~------~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~~al~aGk~Vl 178 (433)
T 1h6d_A 105 GCQHSRIEALVSG------NAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVM 178 (433)
T ss_dssp TCSSEEEEEEECS------CHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred hCCCcEEEEEEcC------CHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHHHHHHCCCcEE
Confidence 3567888766653 134455566666642 45667775 68988887754444456788999999999
Q ss_pred EcC
Q 043412 289 ATN 291 (383)
Q Consensus 289 ~~~ 291 (383)
+-.
T Consensus 179 ~EK 181 (433)
T 1h6d_A 179 CEK 181 (433)
T ss_dssp ECS
T ss_pred EcC
Confidence 864
No 81
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=46.35 E-value=26 Score=30.98 Aligned_cols=92 Identities=11% Similarity=0.012 Sum_probs=56.0
Q ss_pred EEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEec
Q 043412 193 FLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLP 267 (383)
Q Consensus 193 i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~p 267 (383)
|+..|++.. ..-..+.++..+....++++++-+.+.. .+..++.+++++.. .++..+++ ..|+++.+
T Consensus 30 iIG~G~ig~--~H~~a~~~~~~~~~~~~~~~lvav~d~~------~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 30 LIGTGYMGK--CHALAWNAVKTVFGDVERPRLVHLAEAN------AGLAEARAGEFGFEKATADWRALIADPEVDVVSVT 101 (393)
T ss_dssp EECCSHHHH--HHHHHHTTHHHHHCSSCCCEEEEEECC--------TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEEC
T ss_pred EEcCCHHHH--HHHHHHHhhhhhhccCCCcEEEEEECCC------HHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEEC
Confidence 555555432 1222333444445566888998887642 34455566666664 45566664 46888777
Q ss_pred CCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 268 SRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 268 s~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+-...-.-.+.+|+.+|++|++=.-
T Consensus 102 tP~~~H~~~a~~al~aGkhVl~EKP 126 (393)
T 4fb5_A 102 TPNQFHAEMAIAALEAGKHVWCEKP 126 (393)
T ss_dssp SCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred CChHHHHHHHHHHHhcCCeEEEccC
Confidence 6543334468899999999998764
No 82
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=45.78 E-value=40 Score=29.31 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=46.2
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.++++++-+.+. ..+..+..++..+.. +++..+++ .+|+++..+-...-.-.+.+|+..|++|++-.-
T Consensus 26 ~~~~~l~av~d~------~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP 97 (344)
T 3euw_A 26 NPDLELVVIADP------FIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKP 97 (344)
T ss_dssp CTTEEEEEEECS------SHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSC
T ss_pred CCCcEEEEEECC------CHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECC
Confidence 478888866543 235556666666642 45566776 789888877544444467889999999998654
No 83
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=45.42 E-value=18 Score=31.34 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=50.0
Q ss_pred EEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEE
Q 043412 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFV 265 (383)
Q Consensus 191 ~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v 265 (383)
+-|+..|++. ..++.++... ++++++-+.+... +..++.++..+.. .+...+++ ..|+++
T Consensus 8 igiiG~G~ig-----~~~~~~l~~~----~~~~~~av~d~~~------~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~ 72 (329)
T 3evn_A 8 YGVVSTAKVA-----PRFIEGVRLA----GNGEVVAVSSRTL------ESAQAFANKYHLPKAYDKLEDMLADESIDVIY 72 (329)
T ss_dssp EEEEBCCTTH-----HHHHHHHHHH----CSEEEEEEECSCS------STTCC---CCCCSCEESCHHHHHTCTTCCEEE
T ss_pred EEEEechHHH-----HHHHHHHHhC----CCcEEEEEEcCCH------HHHHHHHHHcCCCcccCCHHHHhcCCCCCEEE
Confidence 3355555542 2355555443 6788876665421 1222334455543 45556666 789888
Q ss_pred ecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 266 LPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 266 ~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..+-...-.-.+.+|+..|++|++-+-
T Consensus 73 i~tp~~~h~~~~~~al~aGk~Vl~EKP 99 (329)
T 3evn_A 73 VATINQDHYKVAKAALLAGKHVLVEKP 99 (329)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred ECCCcHHHHHHHHHHHHCCCeEEEccC
Confidence 776543333457889999999998654
No 84
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=45.10 E-value=27 Score=28.38 Aligned_cols=67 Identities=10% Similarity=0.109 Sum_probs=43.7
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCC---CCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGE---GWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e---~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
++.+++.|-. ......+.++++.+|.. -...+-..+.-+|.....+ .-..+.+.|++.|+|||..++
T Consensus 7 ~~~i~~sg~~----~~~~~~l~~~~~~~G~~-~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~W 76 (229)
T 1l0b_A 7 DISMVVSGLT----PKEVMIVQKFAEKYRLA-LTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSW 76 (229)
T ss_dssp CCEEEEESCC----HHHHHHHHHHHHHTTCE-ECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHH
T ss_pred CeEEEEcCCC----HHHHHHHHHHHHHcCCE-EeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHHH
Confidence 4555555532 34467788888888873 1122335566666665322 245789999999999998866
No 85
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=44.98 E-value=1.7e+02 Score=26.06 Aligned_cols=87 Identities=11% Similarity=-0.019 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHhccCCCeEEEEEeCCCCCC---------CchHHHHHHHHhhCCCC--------CccccccccCceEEe
Q 043412 204 GWDVLLKAYLEEFSKADGVVLYLLTNPYHSG---------RDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVL 266 (383)
Q Consensus 204 ~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~---------~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ 266 (383)
..+..++.+..+++. .+.++..+.-..+. .+....+.+.+++.|+. ..+..+...+|++-.
T Consensus 154 s~e~a~~~a~~~k~a--Ga~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~lkI 231 (385)
T 3nvt_A 154 SYEQVAAVAESIKAK--GLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQI 231 (385)
T ss_dssp CHHHHHHHHHHHHHT--TCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTTCSEEEE
T ss_pred CHHHHHHHHHHHHHc--CCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhhCCEEEE
Confidence 777777777777654 34455555422111 12345667777788875 233344455888888
Q ss_pred cCCCCCCChHHHH-HHHcCCCEEEcCCC
Q 043412 267 PSRGEGWGRPLVE-AMSMGLPVIATNWS 293 (383)
Q Consensus 267 ps~~e~~~~~~~E-a~a~G~PvI~~~~~ 293 (383)
+|+. .....+++ +...|+||+.+...
T Consensus 232 gs~~-~~n~~LL~~~a~~gkPVilk~G~ 258 (385)
T 3nvt_A 232 GARN-MQNFELLKAAGRVDKPILLKRGL 258 (385)
T ss_dssp CGGG-TTCHHHHHHHHTSSSCEEEECCT
T ss_pred Cccc-ccCHHHHHHHHccCCcEEEecCC
Confidence 8863 22345554 55689999999864
No 86
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=43.87 E-value=47 Score=28.87 Aligned_cols=69 Identities=19% Similarity=0.213 Sum_probs=46.5
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC----Ccccccccc--CceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE----KPDDGWAPA--ADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+.++++++-+.+. ..+..++..+.+++. ++...++.. .|+++..+-...-.-.+.+|+..|++|++-+
T Consensus 24 ~~~~~~l~av~d~------~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~vl~EK 97 (344)
T 3mz0_A 24 KLSGAEIVAVTDV------NQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESSVLKAIKAQKYVFCEK 97 (344)
T ss_dssp TCSSEEEEEEECS------SHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred hCCCcEEEEEEcC------CHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHHHHHHHHCCCcEEEcC
Confidence 4578888866543 245566677777742 455666655 8988877754433446778999999999855
Q ss_pred C
Q 043412 292 W 292 (383)
Q Consensus 292 ~ 292 (383)
-
T Consensus 98 P 98 (344)
T 3mz0_A 98 P 98 (344)
T ss_dssp C
T ss_pred C
Confidence 3
No 87
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=43.83 E-value=34 Score=27.43 Aligned_cols=62 Identities=15% Similarity=0.128 Sum_probs=40.4
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.++++++.|-. .+++++.++.+|.. +..-...+..+|.+... -..+++.|++.|+|||..++
T Consensus 11 ~~~~v~~sG~~-------~~~~~~~i~~lGg~--~~~~~~~~THlI~~~~~--rt~K~l~a~~~g~~IV~~~W 72 (209)
T 2etx_A 11 TAPKVLFTGVV-------DARGERAVLALGGS--LAGSAAEASHLVTDRIR--RTVKFLCALGRGIPILSLDW 72 (209)
T ss_dssp -CCEEEECSSC-------CHHHHHHHHHTTCE--ECSSTTTCSEEECSSCC--CSHHHHHHHHHTCCEECTHH
T ss_pred CCcEEEEeCCC-------cHHHHHHHHHCCCE--EeCCCCCceEEEECCCC--CCHHHHHHHhcCCccccHHH
Confidence 35667766643 13357788888763 11222357777877532 24789999999999999876
No 88
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=43.25 E-value=39 Score=27.75 Aligned_cols=66 Identities=9% Similarity=0.071 Sum_probs=46.3
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC-ccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK-PDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..++.+.|-. .+....+.+.++.+|..- +-..+-..|.-+|.+... -..+++.|+++|++||..++
T Consensus 9 ~~~~~~Sg~~----~~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~--RT~K~l~aia~G~wIvs~~w 75 (235)
T 3al2_A 9 QYIFQLSSLN----PQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPL--RNEKYLASVAAGKWVLHRSY 75 (235)
T ss_dssp CCEEEEESCC----HHHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCC--CSHHHHHHHHTTCEEECTHH
T ss_pred CEEEEEcCCC----HHHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCC--CCHHHHHHHHcCCcCccHHH
Confidence 5567776532 345567888999988641 101244788888888642 26799999999999999876
No 89
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=42.65 E-value=12 Score=30.79 Aligned_cols=86 Identities=9% Similarity=0.127 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCC--CCCCchHHHHHHHHhhCCCC-------CccccccccCceEEecCCCC----
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPY--HSGRDFGNKIVNFVEDSDLE-------KPDDGWAPAADVFVLPSRGE---- 271 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~~~~-------~~v~~~~~~adi~v~ps~~e---- 271 (383)
++.+.++++++.+. +.++.++..+. .+...+...+.+..+.+|.. ++....+..||.+++|- .+
T Consensus 17 l~~~~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpG-G~~~~~ 93 (229)
T 1fy2_A 17 LEHALPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGG-GNTFQL 93 (229)
T ss_dssp TTTTHHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHHCSEEEECC-SCHHHH
T ss_pred HHHHHHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhcCCEEEECC-CcHHHH
Confidence 44446666666553 45677776542 11123445566667777764 12225578899999996 22
Q ss_pred -------CCChHHHHHHHcCCCEEEcCCC
Q 043412 272 -------GWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 272 -------~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
++--.+-|+...|+|++.+-.|
T Consensus 94 ~~~l~~~gl~~~l~~~~~~G~p~~G~sAG 122 (229)
T 1fy2_A 94 LKESRERGLLAPMADRVKRGALYIGWSAG 122 (229)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCEEEEETHH
T ss_pred HHHHHHCChHHHHHHHHHcCCEEEEECHH
Confidence 2333677888899999998764
No 90
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=42.52 E-value=26 Score=30.75 Aligned_cols=68 Identities=13% Similarity=0.018 Sum_probs=44.4
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.++++++-+.+. ..+..+..++..++. .++..+++ ..|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 50 ~~~~~l~av~d~------~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP 121 (350)
T 3rc1_A 50 EPLTEVTAIASR------RWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKP 121 (350)
T ss_dssp CTTEEEEEEEES------SHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred CCCeEEEEEEcC------CHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCC
Confidence 478888755543 134555666666654 45556665 579888776544334467889999999998543
No 91
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=41.51 E-value=51 Score=28.33 Aligned_cols=67 Identities=13% Similarity=0.019 Sum_probs=45.1
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Ccccccc-ccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWA-PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~-~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
.++++++.+.+. ..+..+.+.+..+.. .+...++ ..+|+++..+....-.-.+.+|+..|++|++-.
T Consensus 23 ~~~~~~~~v~d~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~gk~V~~EK 93 (325)
T 2ho3_A 23 SGEYQLVAIYSR------KLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAKAALSAGKHVILEK 93 (325)
T ss_dssp TTSEEEEEEECS------SHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred CCCeEEEEEEeC------CHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHHHHHHcCCcEEEec
Confidence 467888755543 234556667776652 4555666 678998887754444456778999999999865
No 92
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=41.13 E-value=46 Score=28.93 Aligned_cols=69 Identities=13% Similarity=0.169 Sum_probs=45.8
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+.++++++-+.+. ..+..+...+..+.. ++...++. .+|+++..+-...-.-.+.+|+..|++|++-.-
T Consensus 23 ~~~~~~l~av~d~------~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP 96 (344)
T 3ezy_A 23 MIDDAILYAISDV------REDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKP 96 (344)
T ss_dssp GSTTEEEEEEECS------CHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESC
T ss_pred hCCCcEEEEEECC------CHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEEECC
Confidence 3578888866543 234455566666653 45566666 789988777544333457789999999997653
No 93
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=40.99 E-value=56 Score=28.24 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=48.3
Q ss_pred HHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHH
Q 043412 208 LLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMS 282 (383)
Q Consensus 208 ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a 282 (383)
+++++.+ .++++++-+.+. ..+..+..++..+.. ++...++. ..|+++..+-...-.-.+.+|+.
T Consensus 20 ~~~~l~~----~~~~~l~av~d~------~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~ 89 (330)
T 3e9m_A 20 FVAGLRE----SAQAEVRGIASR------RLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALS 89 (330)
T ss_dssp HHHHHHH----SSSEEEEEEBCS------SSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHHh----CCCcEEEEEEeC------CHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHH
Confidence 4555543 368888766543 124455566666652 55666776 78988877654433345788999
Q ss_pred cCCCEEEcCC
Q 043412 283 MGLPVIATNW 292 (383)
Q Consensus 283 ~G~PvI~~~~ 292 (383)
.|++|++-+-
T Consensus 90 ~gk~vl~EKP 99 (330)
T 3e9m_A 90 QGKPVLLEKP 99 (330)
T ss_dssp TTCCEEECSS
T ss_pred CCCeEEEeCC
Confidence 9999998654
No 94
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=40.14 E-value=30 Score=31.07 Aligned_cols=79 Identities=15% Similarity=0.003 Sum_probs=51.1
Q ss_pred HHHHHHHHhcc----CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHH
Q 043412 208 LLKAYLEEFSK----ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLV 278 (383)
Q Consensus 208 ll~a~~~l~~~----~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~ 278 (383)
.++++.++... .++++++-+.+. ..+..++.+++++.. .++..+++ ..|+++..+-...-.-.++
T Consensus 41 h~~~~~~~~~~~~~~~~~~elvav~d~------~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~~~H~~~~~ 114 (412)
T 4gqa_A 41 HADAYRRAAMFYPDLPKRPHLYALADQ------DQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPNHLHYTMAM 114 (412)
T ss_dssp HHHHHHHHHHHCTTSSSEEEEEEEECS------SHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred HHHHHHhccccccccCCCeEEEEEEcC------CHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCcHHHHHHHH
Confidence 45566554322 246788777653 245566777777764 45566664 5688777664433344688
Q ss_pred HHHHcCCCEEEcCC
Q 043412 279 EAMSMGLPVIATNW 292 (383)
Q Consensus 279 Ea~a~G~PvI~~~~ 292 (383)
+|+.+|++|++-.-
T Consensus 115 ~al~aGkhVl~EKP 128 (412)
T 4gqa_A 115 AAIAAGKHVYCEKP 128 (412)
T ss_dssp HHHHTTCEEEEESC
T ss_pred HHHHcCCCeEeecC
Confidence 99999999998764
No 95
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=39.21 E-value=1.1e+02 Score=24.42 Aligned_cols=159 Identities=9% Similarity=-0.044 Sum_probs=86.6
Q ss_pred EEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---------------C----
Q 043412 192 VFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---------------K---- 252 (383)
Q Consensus 192 ~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---------------~---- 252 (383)
+=-++||-..+||...+.+.-.++++-. .-.-++-|-. . .+..- .+++.|+. .
T Consensus 199 inrwigrtttwkgfyqmfdfhekflkpa-gkstvmegle--r-spafi----aikekgipyeyygnreidkmnlapnqpa 270 (401)
T 1xv5_A 199 INRWIGRTTTWKGFYQMFDFHEKFLKPA-GKSTVMEGLE--R-SPAFI----AIKEKGIPYEYYGNREIDKMNLAPNQPA 270 (401)
T ss_dssp EEEEECCSCGGGCHHHHHHHHHHTTTTT-TCEEEEECCC--C-SHHHH----HHHHTTCCEEEECGGGGGGCCCSSSCCE
T ss_pred hhhhhcccchhHhHHHHhhHHHHhcCcc-chhhhhhhhh--c-CCceE----EEcccCCchhhcCcchhhhhcCCCCCcc
Confidence 3458899999999999998887775432 1233333321 1 11111 22333332 0
Q ss_pred ccccc---------cccCceEEecCC------CCCCChHHHHHHHcCCCEEEc-CCCCccccccCCCceeeecccccccc
Q 043412 253 PDDGW---------APAADVFVLPSR------GEGWGRPLVEAMSMGLPVIAT-NWSGPTEYLTEENGYPLLVGRMSEVT 316 (383)
Q Consensus 253 ~v~~~---------~~~adi~v~ps~------~e~~~~~~~Ea~a~G~PvI~~-~~~g~~e~v~~~~g~~~~~~~~~~~~ 316 (383)
++... ++.+...-..|. ..+.-.+-+|--|||+-.|-- ..|....+--+++-+ .
T Consensus 271 qildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpl----------t 340 (401)
T 1xv5_A 271 QILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPL----------T 340 (401)
T ss_dssp EEESCCCHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBG----------G
T ss_pred hhhhheecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcc----------c
Confidence 01111 122223222222 234556789999999844443 333222211111110 0
Q ss_pred cCCCCccc-ccCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHH
Q 043412 317 EGPFKGHF-WAEPSVDKLRALMRLVVSNVDEAKAKGKQAREDMIQRFSPETVAG 369 (383)
Q Consensus 317 ~~~~~g~~-~~~~~~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~ 369 (383)
.+ ..|++ +++.|.++-.+.|.++-.|..++.+-.+.|++..-++-+..-..+
T Consensus 341 sh-dsgiiwfdendmestferikelssdralydrerekayeflyqhqdssfcfk 393 (401)
T 1xv5_A 341 SH-DSGIIWFDENDMESTFERIKELSSDRALYDREREKAYEFLYQHQDSSFCFK 393 (401)
T ss_dssp GS-CCSCEEECTTCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHBHHHHHH
T ss_pred cc-CCceEEecCCchHHHHHHHHHhccchhhhhHHHHHHHHHHHhcccccchhH
Confidence 11 23544 455599999999999999999999888888887666555444433
No 96
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=38.52 E-value=88 Score=27.40 Aligned_cols=67 Identities=12% Similarity=0.027 Sum_probs=44.8
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Ccccccccc--CceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAPA--ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
++++++-+.+. ..+..++.++.++.. .++..+++. .|+++..+-...-.-.+.+|+.+|++|++-+-
T Consensus 49 ~~~~lvav~d~------~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP 120 (361)
T 3u3x_A 49 AGARLAGFHEK------DDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKP 120 (361)
T ss_dssp TTCEEEEEECS------CHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred CCcEEEEEEcC------CHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCC
Confidence 68888877753 245556666776632 556667754 78888776432223357899999999998653
No 97
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=38.44 E-value=19 Score=25.33 Aligned_cols=57 Identities=12% Similarity=0.088 Sum_probs=32.4
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhCCCC--------CccccccccCceEEecCCCCCCChHHHHHHH
Q 043412 224 LYLLTNPYHSGRDFGNKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMS 282 (383)
Q Consensus 224 l~i~G~~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a 282 (383)
++++|.|-. .+-....+++.+++.|+. .++......+|+++..... .+...-++..+
T Consensus 7 ll~Cg~G~s-TS~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~pqv-~~~~~~~~~~~ 71 (106)
T 1e2b_A 7 YLFSSAGMS-TSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQI-AYMLPEIQRLL 71 (106)
T ss_dssp EEECSSSTT-THHHHHHHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTTS-GGGHHHHHHHS
T ss_pred EEECCCchh-HHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEccch-hhhHHHHHHHh
Confidence 455555543 224446777888888875 2334455788988866532 23334444444
No 98
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=38.04 E-value=45 Score=29.65 Aligned_cols=68 Identities=13% Similarity=0.089 Sum_probs=45.0
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.++++++-+.+. ..+..++..+.+++. .++..+++ ..|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 25 ~~~~~l~av~d~------~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP 96 (387)
T 3moi_A 25 HPDAQIVAACDP------NEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIVEKP 96 (387)
T ss_dssp CTTEEEEEEECS------CHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred CCCeEEEEEEeC------CHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceeeeCC
Confidence 478888877653 134445555555654 55566665 489888776543333467899999999998654
No 99
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=37.90 E-value=38 Score=27.71 Aligned_cols=105 Identities=15% Similarity=0.193 Sum_probs=60.0
Q ss_pred EEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHH----hhCCCCCccccccccCceEEecC
Q 043412 193 FLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFV----EDSDLEKPDDGWAPAADVFVLPS 268 (383)
Q Consensus 193 i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~adi~v~ps 268 (383)
|+-.|++ |...+++.+..-+..++++.+.++|+|..-.++..+...... ++.+. ..=+++.|.
T Consensus 8 iiKlGNi----gts~~idl~LDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~~p---------DfvI~isPN 74 (283)
T 1qv9_A 8 FIKCGNL----GTSMMMDMLLDERADREDVEFRVVGTSVKMDPECVEAAVEMALDIAEDFEP---------DFIVYGGPN 74 (283)
T ss_dssp EEECSCC----HHHHHTTGGGSTTSCCSSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHHCC---------SEEEEECSC
T ss_pred EEEeccc----chHHHHHHHHHhhhccCCceEEEeccCCCCCHHHHHHHHHHhhhhhhhcCC---------CEEEEECCC
Confidence 5566665 445555554333344689999999999653333333333332 33332 222455565
Q ss_pred CCCCCChHHHHHH-HcCCCEEEcC-CCCcc--cccc-CCCceeeecc
Q 043412 269 RGEGWGRPLVEAM-SMGLPVIATN-WSGPT--EYLT-EENGYPLLVG 310 (383)
Q Consensus 269 ~~e~~~~~~~Ea~-a~G~PvI~~~-~~g~~--e~v~-~~~g~~~~~~ 310 (383)
-.-+.|...-|.+ +.|+|+|.-. .++.. +-++ ++-||++-..
T Consensus 75 ~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~kd~l~~~g~GYIivk~ 121 (283)
T 1qv9_A 75 PAAPGPSKAREMLADSEYPAVIIGDAPGLKVKDEMEEQGLGYILVKP 121 (283)
T ss_dssp TTSHHHHHHHHHHHTSSSCEEEEEEGGGGGGHHHHHHTTCEEEEETT
T ss_pred CCCCCchHHHHHHHhCCCCEEEEcCCcchhhHHHHHhcCCcEEEEec
Confidence 5556677888887 5899976654 44332 2233 3678777543
No 100
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=37.90 E-value=38 Score=26.96 Aligned_cols=56 Identities=9% Similarity=0.059 Sum_probs=36.9
Q ss_pred CchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 235 RDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.+....+.+.+..+|-..-...+-..+..+|.+.. .-..+++.|++.|++||..++
T Consensus 21 ~~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~--~rT~K~l~ai~~g~~Iv~~~W 76 (199)
T 3u3z_A 21 SEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKP--LRTLNVLLGIARGCWVLSYDW 76 (199)
T ss_dssp HHHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSC--CCBHHHHHHHHTTCEEEETHH
T ss_pred HHHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCC--CCCHHHHHHHHCCCcEEeHHH
Confidence 34556688888887421111233355666676543 234799999999999999876
No 101
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=37.09 E-value=69 Score=22.25 Aligned_cols=69 Identities=10% Similarity=0.214 Sum_probs=46.6
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..++.+++.|.- ...+..+.+++..+|-. -...+-..++.+|.......-+.++..|...|+|||..++
T Consensus 16 l~g~~i~isg~~----~~~r~~l~~li~~~Gg~-v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~W 84 (107)
T 3l3e_A 16 LHKVVVCVSKKL----SKKQSELNGIAASLGAD-YRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHW 84 (107)
T ss_dssp TTTCEEEECGGG----GGGHHHHHHHHHHTTCE-EESSCCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHH
T ss_pred CCCeEEEEeCCC----hHhHHHHHHHHHHcCCE-EeccccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHH
Confidence 346788887754 24578888999988753 1112225667777643333456789999999999998765
No 102
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=36.73 E-value=23 Score=25.32 Aligned_cols=67 Identities=9% Similarity=0.066 Sum_probs=45.5
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
.+..|+|.|.- ..-+++++++++.+|-. -...+-...|++|.....|..+-++-.|...|+|||.-+
T Consensus 12 ~G~~~ViTG~l----~~~R~e~k~~ie~~Ggk-v~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~ 78 (113)
T 2cok_A 12 SNMKILTLGKL----SRNKDEVKAMIEKLGGK-LTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSED 78 (113)
T ss_dssp SSCEEEECSCC----SSCHHHHHHHHHHTTCE-EESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTH
T ss_pred CCCEEEEEecC----CCCHHHHHHHHHHCCCE-EcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHH
Confidence 46688888865 12578889999988763 112233556666655222345789999999999999765
No 103
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=36.65 E-value=16 Score=28.64 Aligned_cols=66 Identities=18% Similarity=0.211 Sum_probs=39.6
Q ss_pred cccccCceEEe-cCCCCCCCh--HHHHHHHcCCCEEEcCCCCc-cccccC-CCceeeecccccccccCCCCcccccCCCH
Q 043412 256 GWAPAADVFVL-PSRGEGWGR--PLVEAMSMGLPVIATNWSGP-TEYLTE-ENGYPLLVGRMSEVTEGPFKGHFWAEPSV 330 (383)
Q Consensus 256 ~~~~~adi~v~-ps~~e~~~~--~~~Ea~a~G~PvI~~~~~g~-~e~v~~-~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (383)
.+...+|.+|. |. ++|. .+.||+..++||++-+.-+. ..++.+ ....+.-. .|+
T Consensus 103 ~m~~~sda~IvlpG---g~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~------------------~~~ 161 (176)
T 2iz6_A 103 INALSSNVLVAVGM---GPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVA------------------ADV 161 (176)
T ss_dssp CCGGGCSEEEEESC---CHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEE------------------SSH
T ss_pred HHHHhCCEEEEecC---CccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEc------------------CCH
Confidence 44577887664 43 3443 57888999999999886221 112222 11111221 289
Q ss_pred HHHHHHHHHHhc
Q 043412 331 DKLRALMRLVVS 342 (383)
Q Consensus 331 ~~la~~i~~ll~ 342 (383)
+++.+.+.+.+.
T Consensus 162 ~e~~~~l~~~~~ 173 (176)
T 2iz6_A 162 AGAIAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998888764
No 104
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=36.44 E-value=1e+02 Score=26.31 Aligned_cols=67 Identities=7% Similarity=0.060 Sum_probs=41.1
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Ccccccc-ccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWA-PAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~-~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+.++++++ +.+. ..+..+++.+..+.. .+....+ ..+|+++..+....-.-.+.+|+..|++|++-.
T Consensus 24 ~~~~~~l~-v~d~------~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~al~~Gk~V~~EK 94 (323)
T 1xea_A 24 QWPDIELV-LCTR------NPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDK 94 (323)
T ss_dssp TSTTEEEE-EECS------CHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEES
T ss_pred hCCCceEE-EEeC------CHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHHHHHHCCCeEEEeC
Confidence 34678888 5543 134455556665543 1222333 678988887754433445668999999999754
No 105
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=35.98 E-value=46 Score=26.47 Aligned_cols=67 Identities=9% Similarity=0.054 Sum_probs=43.4
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCC---CCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGE---GWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e---~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
++.+++.|-. ....+.+.++++.+|.. -...+-..+.-+|..+..+ .-..+.+.|++.|+|||..++
T Consensus 4 ~~~~~~sg~~----~~~~~~l~~~~~~~G~~-~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~W 73 (214)
T 1t15_A 4 RMSMVVSGLT----PEEFMLVYKFARKHHIT-LTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFW 73 (214)
T ss_dssp CCEEEEESCC----HHHHHHHHHHHHHHTCE-ECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHH
T ss_pred cEEEEECCCC----HHHHHHHHHHHHHhCCE-EeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHH
Confidence 4566666543 34567788888888763 1123335566666665322 235789999999999998865
No 106
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=35.74 E-value=1.2e+02 Score=26.83 Aligned_cols=66 Identities=14% Similarity=0.099 Sum_probs=43.3
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--CccccccccCceEEecCCCCCCC----hHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAPAADVFVLPSRGEGWG----RPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~adi~v~ps~~e~~~----~~~~Ea~a~G~PvI~~~~ 292 (383)
+++++-+.+. ..+..+++++++|+. .++..++...|+++..+-...-+ -....|+..|++|++=+-
T Consensus 31 ~~elvav~~~------~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~~a~~al~aGkhVl~EKP 102 (372)
T 4gmf_A 31 GLELVGLLAQ------GSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGTQLARHFLARGVHVIQEHP 102 (372)
T ss_dssp TEEEEEEECC------SSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHHHHHHHHHHTTCEEEEESC
T ss_pred CeEEEEEECC------CHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHHHHHHHHHHcCCcEEEecC
Confidence 5888755543 135566777788875 56677778889876554322211 246788999999998764
No 107
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=35.49 E-value=1.7e+02 Score=24.31 Aligned_cols=97 Identities=8% Similarity=-0.071 Sum_probs=58.3
Q ss_pred EEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC---------CchHHHHHHHHhhCCCC--------Cccc
Q 043412 193 FLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG---------RDFGNKIVNFVEDSDLE--------KPDD 255 (383)
Q Consensus 193 i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~---------~~~~~~~~~~~~~~~~~--------~~v~ 255 (383)
++..| .......+..++.+.++++.. +.++..+.-..+. .+....+.+..++.|+. ..+.
T Consensus 25 ~vIAg-pc~~~~~e~a~~~a~~l~~~G--a~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d~~~~~ 101 (262)
T 1zco_A 25 TIIAG-PCSIESREQIMKVAEFLAEVG--IKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMDTRHVE 101 (262)
T ss_dssp EEEEE-CSBCCCHHHHHHHHHHHHHTT--CCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCCGGGHH
T ss_pred EEEEe-CCCCCCHHHHHHHHHHHHHcC--CCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCCHHhHH
Confidence 33334 356677888888888887654 3444444322111 22345667778888885 2233
Q ss_pred cccccCceEEecCCCCCCChHHHHHH-HcCCCEEEcCCC
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVEAM-SMGLPVIATNWS 293 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~Ea~-a~G~PvI~~~~~ 293 (383)
.+...+|++-.+|+. .....+++++ ..|+||+.++..
T Consensus 102 ~l~~~vd~~kIga~~-~~n~~ll~~~a~~~kPV~lk~G~ 139 (262)
T 1zco_A 102 LVAKYSDILQIGARN-SQNFELLKEVGKVENPVLLKRGM 139 (262)
T ss_dssp HHHHHCSEEEECGGG-TTCHHHHHHHTTSSSCEEEECCT
T ss_pred HHHhhCCEEEECccc-ccCHHHHHHHHhcCCcEEEecCC
Confidence 343448888888863 2345545554 479999998764
No 108
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=35.48 E-value=34 Score=29.94 Aligned_cols=83 Identities=11% Similarity=0.192 Sum_probs=47.4
Q ss_pred HHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC------------cccccc---ccCceEEecCC-CCC
Q 043412 209 LKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK------------PDDGWA---PAADVFVLPSR-GEG 272 (383)
Q Consensus 209 l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~---~~adi~v~ps~-~e~ 272 (383)
++|+ ++.+++|+-++++.+-|-+...+........+...++.+ -+..++ ...|-|+.|.. .--
T Consensus 128 lDAl-~iA~~nP~k~VVFfaiGFETTaP~tA~~i~~a~~~~l~Nfsvl~~h~l~pPa~~all~~~~~idgfi~PGHVstI 206 (372)
T 2z1d_A 128 FDTY-RIAKENPDKTVVHFSPGFETTTAPAAGMLNVAAQEELENFKIYSVHRLTPPAVEVLLKQGTVFQGLIAPGHVSTI 206 (372)
T ss_dssp HHHH-HHHHHCTTSEEEEEEEECHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHHHHHHTSCCCSEEEEEHHHHHH
T ss_pred HHHH-HHHHHCCCCeEEEEeeChhhccHHHHHHHHHHHHcCCCCEEEEEeccccHHHHHHHHcCCCcCcEEEecCeeeEE
Confidence 4454 333456777777777664322233333333455555531 011222 26789999975 234
Q ss_pred CChHHHHHH--HcCCCEEEcCC
Q 043412 273 WGRPLVEAM--SMGLPVIATNW 292 (383)
Q Consensus 273 ~~~~~~Ea~--a~G~PvI~~~~ 292 (383)
.|....|.+ -+|+|+|++..
T Consensus 207 iG~~~y~~l~~~y~~P~VVaGF 228 (372)
T 2z1d_A 207 IGVKGWEYLTEKYGIPQVVAGF 228 (372)
T ss_dssp HTTHHHHHHHHHHCCCEEEECS
T ss_pred eccchhHHHHHHcCCCEEEcCC
Confidence 567777766 46999999876
No 109
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=34.27 E-value=2.1e+02 Score=24.05 Aligned_cols=90 Identities=13% Similarity=0.076 Sum_probs=53.1
Q ss_pred cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCC---------CchHHHHHHHHhhCCCC--------CccccccccCce
Q 043412 201 YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSG---------RDFGNKIVNFVEDSDLE--------KPDDGWAPAADV 263 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~---------~~~~~~~~~~~~~~~~~--------~~v~~~~~~adi 263 (383)
...+.+..++.+..+++-.-++ +-.+.-..+. .+....+.+.+++.|+. ..+..+...+|+
T Consensus 47 ~~~~~e~a~~~a~~~k~~ga~~--~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~vd~ 124 (276)
T 1vs1_A 47 SVESWEQVREAALAVKEAGAHM--LRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYADM 124 (276)
T ss_dssp BCCCHHHHHHHHHHHHHHTCSE--EECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCE--EEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhCCe
Confidence 5556777777777666554332 2222111111 23346677888888886 233344344888
Q ss_pred EEecCCCCCCChHHHHHH-HcCCCEEEcCCC
Q 043412 264 FVLPSRGEGWGRPLVEAM-SMGLPVIATNWS 293 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~-a~G~PvI~~~~~ 293 (383)
+-.+|+. .....+++++ ..|+||+.+...
T Consensus 125 ~kIgs~~-~~n~~ll~~~a~~~kPV~lk~G~ 154 (276)
T 1vs1_A 125 LQIGARN-MQNFPLLREVGRSGKPVLLKRGF 154 (276)
T ss_dssp EEECGGG-TTCHHHHHHHHHHTCCEEEECCT
T ss_pred EEECccc-ccCHHHHHHHHccCCeEEEcCCC
Confidence 8888863 3344455544 579999999864
No 110
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=34.14 E-value=24 Score=28.63 Aligned_cols=64 Identities=8% Similarity=-0.014 Sum_probs=43.1
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..++.+.|-. ....+.+.+.++.+|-. +..-...+..+|.+... -..+.+.|++.|+|||..++
T Consensus 16 ~~~i~~SG~~----~~~~~~l~~~i~~lGg~--v~~~~~~~THLI~~~~~--rT~K~l~A~~~g~~IVs~~W 79 (219)
T 3sqd_A 16 TPFVLFTGFE----PVQVQQYIKKLYILGGE--VAESAQKCTHLIASKVT--RTVKFLTAISVVKHIVTPEW 79 (219)
T ss_dssp CCEEEECSCC----HHHHHHHHHHHHHTTCE--ECSSGGGCSEEECSSCC--CCHHHHHHTTTCSEEECHHH
T ss_pred CeEEEEeCCC----hHHHHHHHHHHHHCCCE--EeCCCCCceEEEECCCC--CCHHHHHHHHcCCCEecHHH
Confidence 3455555532 23456788888888864 11113788888887531 23689999999999999876
No 111
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=33.74 E-value=90 Score=27.75 Aligned_cols=57 Identities=14% Similarity=0.239 Sum_probs=34.7
Q ss_pred chHHHHHHHHhhCCCC--------Cccccccc-cCceEEecCCCCCCChHHHHHHH-cCCCEEEcCCC
Q 043412 236 DFGNKIVNFVEDSDLE--------KPDDGWAP-AADVFVLPSRGEGWGRPLVEAMS-MGLPVIATNWS 293 (383)
Q Consensus 236 ~~~~~~~~~~~~~~~~--------~~v~~~~~-~adi~v~ps~~e~~~~~~~Ea~a-~G~PvI~~~~~ 293 (383)
+....+.+.+++.|+. +.+..+-. .+|++=.+|. +-....++++++ .|+|||.+.-.
T Consensus 101 e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~-~~~N~pLL~~va~~gKPViLStGm 167 (385)
T 1vli_A 101 EWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASY-EINHLPLLKYVARLNRPMIFSTAG 167 (385)
T ss_dssp GGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTCCSCEEECGG-GTTCHHHHHHHHTTCSCEEEECTT
T ss_pred HHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcCCCEEEECcc-cccCHHHHHHHHhcCCeEEEECCC
Confidence 3445666666666663 11222212 2577777774 455677888766 69999998753
No 112
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=33.43 E-value=1.3e+02 Score=24.65 Aligned_cols=69 Identities=12% Similarity=0.084 Sum_probs=40.5
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Cc-cccccc--------------------c--CceEEecCCCCCCCh
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KP-DDGWAP--------------------A--ADVFVLPSRGEGWGR 275 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~-v~~~~~--------------------~--adi~v~ps~~e~~~~ 275 (383)
+..|.+.|.. ........++.++++..|=. ++ ...++. . ..+++.+. ..-..
T Consensus 5 g~~F~ls~~~-~~~~~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~--~~rt~ 81 (241)
T 2vxb_A 5 DCVFAFSGPV-HEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDT--FSRKV 81 (241)
T ss_dssp TEEEEECCCS-STTSSCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSS--CCCCH
T ss_pred CcEEEEecCC-CCchhhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCC--CCCcH
Confidence 4566666652 11235567888888887642 21 122211 0 12333332 23457
Q ss_pred HHHHHHHcCCCEEEcCC
Q 043412 276 PLVEAMSMGLPVIATNW 292 (383)
Q Consensus 276 ~~~Ea~a~G~PvI~~~~ 292 (383)
+.+.|++.|+|||...+
T Consensus 82 K~~~ala~gipiV~~~W 98 (241)
T 2vxb_A 82 KYLEALAFNIPCVHPQF 98 (241)
T ss_dssp HHHHHHHHTCCEECTHH
T ss_pred HHHHHHHcCCCEecHHH
Confidence 89999999999999976
No 113
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=32.70 E-value=72 Score=28.69 Aligned_cols=68 Identities=13% Similarity=0.003 Sum_probs=45.2
Q ss_pred CCCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCC-----Ccccccccc-------CceEEecCCCCCCChHHHHHHHcCC
Q 043412 219 ADGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLE-----KPDDGWAPA-------ADVFVLPSRGEGWGRPLVEAMSMGL 285 (383)
Q Consensus 219 ~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~-------adi~v~ps~~e~~~~~~~Ea~a~G~ 285 (383)
.++++++. +.+. ..+..++.++.+++. .++..+++. .|+++..+-...-.-.+.+|+.+|+
T Consensus 62 ~~~~~lva~v~d~------~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aGk 135 (417)
T 3v5n_A 62 DDHYELVAGALSS------TPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRGI 135 (417)
T ss_dssp TSCEEEEEEECCS------SHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTTC
T ss_pred CCCcEEEEEEeCC------CHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHHHHHHhCCC
Confidence 35677763 4432 245566667777763 556677765 8988877654433446788999999
Q ss_pred CEEEcCC
Q 043412 286 PVIATNW 292 (383)
Q Consensus 286 PvI~~~~ 292 (383)
+|++-+-
T Consensus 136 hVl~EKP 142 (417)
T 3v5n_A 136 HVICDKP 142 (417)
T ss_dssp EEEEESS
T ss_pred eEEEECC
Confidence 9998653
No 114
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=32.60 E-value=1.1e+02 Score=26.45 Aligned_cols=68 Identities=18% Similarity=0.106 Sum_probs=44.2
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+.++++++.+.+. ..+..+...+.++.. +++..+++ .+|+++..+-...-.-.+.+|+..|++|++-.
T Consensus 30 ~~~~~~~vav~d~------~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~G~~v~~eK 102 (346)
T 3cea_A 30 KIQGVKLVAACAL------DSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEK 102 (346)
T ss_dssp TCSSEEEEEEECS------CHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred cCCCcEEEEEecC------CHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHHHHHHCCCEEEEcC
Confidence 3467887766553 234455666666652 44556665 68988877654333345678899999999854
No 115
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=32.32 E-value=39 Score=29.94 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=36.9
Q ss_pred HHHHHHHhhCCCC---Ccccccccc--CceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 239 NKIVNFVEDSDLE---KPDDGWAPA--ADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 239 ~~~~~~~~~~~~~---~~v~~~~~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+..+..++.++.. .++..+++. .|+++..+-...-.-.+.+|+.+|++|++-+
T Consensus 57 ~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EK 114 (383)
T 3oqb_A 57 EKVEALAKRFNIARWTTDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEK 114 (383)
T ss_dssp HHHHHHHHHTTCCCEESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECS
T ss_pred HHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcC
Confidence 4556666777764 556677654 7888776654444456789999999999854
No 116
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.29 E-value=1.2e+02 Score=21.96 Aligned_cols=66 Identities=12% Similarity=0.253 Sum_probs=45.9
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
..++.+++.|.. ...+..+..++..+|-. -...+-..++.+|... .-+.++..|...|+|||...+
T Consensus 23 f~g~~i~itG~~----~~~r~~l~~~i~~~Gg~-v~~~~s~~~ThLI~~~---~~~~K~~~A~~~gi~IV~~~W 88 (129)
T 2d8m_A 23 LQGVVVVLSGFQ----NPFRSELRDKALELGAK-YRPDWTRDSTHLICAF---ANTPKYSQVLGLGGRIVRKEW 88 (129)
T ss_dssp STTEEEEEESCC----TTHHHHHHHHHHHTTEE-EESSCCTTCCEEEESS---SSCHHHHHHHHHTCEEEETHH
T ss_pred CCCeEEEEeCCC----cHHHHHHHHHHHHcCCE-EeCCcCCCCeEEEecC---CCChHHHHHHHCCCcEecHHH
Confidence 457788887753 34678888999888753 1112234567777653 346788899999999999876
No 117
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=32.10 E-value=1.3e+02 Score=24.07 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=48.6
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps~ 269 (383)
.|=+..+.+|+.-+..- ..-+++++|.. ....+.+.+.+...|.. .....-+..=|+++...-
T Consensus 50 ~kT~~~L~~A~~~i~~i-~~~~iLfVgTk----~~~~~~V~~~A~~~g~~~v~~rwlgG~LTN~~~~~f~~PdlliV~Dp 124 (208)
T 1vi6_A 50 RKLDERIRVAAKFLSRY-EPSKILLVAAR----QYAHKPVQMFSKVVGSDYIVGRFIPGTLTNPMLSEYREPEVVFVNDP 124 (208)
T ss_dssp HHHHHHHHHHHHHHTTS-CGGGEEEEECS----GGGHHHHHHHHHHHCCEEEESSCCTTTTTCTTSTTCCCCSEEEESCT
T ss_pred HHHHHHHHHHHHHHHhc-CCCEEEEEeCC----HHHHHHHHHHHHHhCCeeecCEECCCcccChhhHhhCCCCEEEEECC
Confidence 45556666677666554 55678888864 23344555555554432 111111244566665542
Q ss_pred -CCCCChHHHHHHHcCCCEEEc
Q 043412 270 -GEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 270 -~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
.| -..+.||...|+|+|+-
T Consensus 125 ~~e--~~ai~EA~~l~IPvIal 144 (208)
T 1vi6_A 125 AID--KQAVSEATAVGIPVVAL 144 (208)
T ss_dssp TTT--HHHHHHHHHTTCCEEEE
T ss_pred Ccc--hhHHHHHHHhCCCEEEE
Confidence 33 36899999999999986
No 118
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=32.09 E-value=71 Score=21.70 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=43.9
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
....+++.|.- .. .+++++++++.+|-. -...+-...|++|.-. ..|.++-.|...|+|||.-+
T Consensus 9 ~G~~~v~TG~l---~~-~R~e~~~~i~~~Gg~-v~~sVskkt~~LV~g~---~~gsK~~kA~~lgI~Ii~E~ 72 (92)
T 1l7b_A 9 KGLTFVITGEL---SR-PREEVKALLRRLGAK-VTDSVSRKTSYLVVGE---NPGSKLEKARALGVPTLTEE 72 (92)
T ss_dssp TTCEEECSTTT---TS-CHHHHHHHHHHTTCE-EESCCSSSCCCBEECS---SSSTTHHHHHCSSSCCEEHH
T ss_pred CCcEEEEecCC---CC-CHHHHHHHHHHcCCE-EeCcccCCeeEEEeCC---CCChHHHHHHHcCCcEEeHH
Confidence 35677887764 12 578899999998863 1122335667777653 34688999999999998654
No 119
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=31.52 E-value=1.3e+02 Score=26.43 Aligned_cols=54 Identities=19% Similarity=0.240 Sum_probs=33.5
Q ss_pred HHHHHHHhhCCCC--------Ccccccccc-CceEEecCCCCCCChHHHHHHH-cCCCEEEcCCC
Q 043412 239 NKIVNFVEDSDLE--------KPDDGWAPA-ADVFVLPSRGEGWGRPLVEAMS-MGLPVIATNWS 293 (383)
Q Consensus 239 ~~~~~~~~~~~~~--------~~v~~~~~~-adi~v~ps~~e~~~~~~~Ea~a-~G~PvI~~~~~ 293 (383)
..+.+.+++.|+. +.+..+-.- +|++=.+|. +-....++++++ .|+|||.|.-.
T Consensus 81 ~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~-~~~N~pLL~~va~~gKPviLstGm 144 (350)
T 3g8r_A 81 QKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASC-SFTDWPLLERIARSDKPVVASTAG 144 (350)
T ss_dssp HHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSS-STTCHHHHHHHHTSCSCEEEECTT
T ss_pred HHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcc-cccCHHHHHHHHhhCCcEEEECCC
Confidence 4455566666664 112222222 677777775 456677887766 79999998753
No 120
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=31.47 E-value=71 Score=27.49 Aligned_cols=68 Identities=10% Similarity=0.083 Sum_probs=44.9
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.++++++-+.+. ..+..+.+.+..+.. .+...+++ ..|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 25 ~~~~~l~av~d~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP 95 (331)
T 4hkt_A 25 NADARLVAVADA------FPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKP 95 (331)
T ss_dssp CTTEEEEEEECS------SHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred CCCcEEEEEECC------CHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecC
Confidence 478888866543 234455666666653 44456665 789888776544334467889999999998653
No 121
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=31.29 E-value=51 Score=25.65 Aligned_cols=70 Identities=9% Similarity=0.037 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcC
Q 043412 205 WDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMG 284 (383)
Q Consensus 205 ~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G 284 (383)
....++.+..+++++|+.+|.++-+. +.+..+- .. .+...+++.+.+++.|-..+-.+..+-+.++.|
T Consensus 82 ~syT~dTl~~l~~~~p~~~~~~iiG~--------D~l~~l~---~W-~~~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 82 SVTTYALLEKIQEIYPTADITFVIGP--------DNFFKFA---KF-YKAEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEEECH--------HHHHTGG---GS-TTHHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHhcCCCeEEEEec--------chhhhcc---cc-hhHHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 33456677777778899887665543 2222211 11 234566777888888865555666777888888
Q ss_pred CC
Q 043412 285 LP 286 (383)
Q Consensus 285 ~P 286 (383)
.+
T Consensus 150 ~~ 151 (177)
T 3h05_A 150 KD 151 (177)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 122
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=31.28 E-value=76 Score=27.75 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=44.2
Q ss_pred CCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEc
Q 043412 219 ADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 219 ~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
.++++++.+.+. ..+..+.+.+..++. .++..+++ ..|+++..+-...-.-.+.+|+..|++|++-
T Consensus 28 ~~~~~lv~v~d~------~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~V~~E 101 (362)
T 1ydw_A 28 APNATISGVASR------SLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLE 101 (362)
T ss_dssp CTTEEEEEEECS------SHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEEC
T ss_pred CCCcEEEEEEcC------CHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHCCCeEEEe
Confidence 467888766653 234456666776641 34556664 5899888775443344677899999999986
Q ss_pred C
Q 043412 291 N 291 (383)
Q Consensus 291 ~ 291 (383)
.
T Consensus 102 K 102 (362)
T 1ydw_A 102 K 102 (362)
T ss_dssp S
T ss_pred c
Confidence 5
No 123
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.08 E-value=2e+02 Score=22.90 Aligned_cols=83 Identities=17% Similarity=0.134 Sum_probs=48.1
Q ss_pred cccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecC
Q 043412 201 YRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPS 268 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps 268 (383)
-.|-+..+.+|+.-+... ..-++.++|... .....+.+.+...|-. .....-+..=|+++...
T Consensus 45 L~kT~~~L~~A~~~i~~~-~~~~ilfV~tk~----~~~~~V~k~A~~~g~~~v~~rw~gG~lTN~~~~~~~~Pdllvv~D 119 (202)
T 3j20_B 45 VRKTDERLKVAGKFLAKF-EPQSILAVSVRL----YGQKPVKKFGEVTGARAIPGRFLPGTMTNPAVKNFFEPDVLIVTD 119 (202)
T ss_dssp HHHHHHHHHHHHHHHHHS-CSSCEEEECCCT----TTHHHHHHHHHHHSCCCCCSSCCSSSSSCSSSSSCCCCSEEEESC
T ss_pred HHHHHHHHHHHHHHHHhh-CCCeEEEEecCh----HHHHHHHHHHHHHCCceeCceecCCCcccHhHHhccCCCeEEEeC
Confidence 345556677777665544 345777888652 3344555555554432 11112224556666553
Q ss_pred C-CCCCChHHHHHHHcCCCEEEc
Q 043412 269 R-GEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 269 ~-~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
- .| -..+.||...|+|+|+-
T Consensus 120 p~~d--~~ai~EA~~l~IP~Ial 140 (202)
T 3j20_B 120 PRAD--HQAMREAVEIGIPIVAL 140 (202)
T ss_dssp TTTS--HHHHHHHHHHTCCEEEE
T ss_pred Cccc--hHHHHHHHHcCCCEEEE
Confidence 2 23 35789999999999974
No 124
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=31.04 E-value=97 Score=26.57 Aligned_cols=66 Identities=9% Similarity=0.145 Sum_probs=42.3
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
++++++.+.+. ..+..+.+.+..+.. +++..+++ .+|+++..+....-.-.+.+|+..|++|++-.
T Consensus 23 ~~~~~vav~d~------~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ek 93 (332)
T 2glx_A 23 TGGEVVSMMST------SAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTLAAIRAGKHVLCEK 93 (332)
T ss_dssp TTCEEEEEECS------CHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred CCCeEEEEECC------CHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHHHHHHCCCeEEEeC
Confidence 56777755543 134455556666653 45556665 48998887754433446778999999999854
No 125
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=31.02 E-value=86 Score=27.20 Aligned_cols=41 Identities=12% Similarity=-0.015 Sum_probs=26.0
Q ss_pred CccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 252 KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 252 ~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
.+...++..+|+++..+-...---....++..|++||++.-
T Consensus 71 ~d~~~l~~~vDvV~~aTp~~~h~~~a~~~l~aGk~Vi~sap 111 (334)
T 2czc_A 71 GTLNDLLEKVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGG 111 (334)
T ss_dssp CBHHHHHTTCSEEEECCSTTHHHHHHHHHHHHTCEEEECTT
T ss_pred CcHHHhccCCCEEEECCCccccHHHHHHHHHcCCceEeecc
Confidence 34555567899988776322111234577889999997753
No 126
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=30.43 E-value=74 Score=27.85 Aligned_cols=69 Identities=10% Similarity=0.116 Sum_probs=44.4
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCC----CCccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDL----EKPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+.++++++-+.+.. .+..+...+.+++ ..++..++. ..|+++..+-...-.-.+.+|+..|++|++-+
T Consensus 45 ~~~~~~lvav~d~~------~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EK 118 (357)
T 3ec7_A 45 TVSGVEVVAVCDIV------AGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADVAVAALNANKYVFCEK 118 (357)
T ss_dssp TCTTEEEEEEECSS------TTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred hCCCcEEEEEEeCC------HHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeec
Confidence 45788888666531 2334455555553 145556665 58988877654433446788999999999865
Q ss_pred C
Q 043412 292 W 292 (383)
Q Consensus 292 ~ 292 (383)
-
T Consensus 119 P 119 (357)
T 3ec7_A 119 P 119 (357)
T ss_dssp S
T ss_pred C
Confidence 3
No 127
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=30.27 E-value=1e+02 Score=23.99 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=59.8
Q ss_pred EEEEEeeccccccCHHHH-HHHHHHHhccCCCeEEEEEeCCCCC----CCchHHHHHHHHhhCC----CCC---------
Q 043412 191 FVFLSVFKWEYRKGWDVL-LKAYLEEFSKADGVVLYLLTNPYHS----GRDFGNKIVNFVEDSD----LEK--------- 252 (383)
Q Consensus 191 ~~i~~~g~~~~~K~~~~l-l~a~~~l~~~~~~~~l~i~G~~~~~----~~~~~~~~~~~~~~~~----~~~--------- 252 (383)
..|++.|. .|.|.+ .+++.++++++|+++|.++-....- .+.....+.+++.... +.+
T Consensus 45 ~~~isgga----~G~D~~aae~vl~lk~~y~~i~L~~v~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~ 120 (181)
T 2nx2_A 45 EWILISGQ----LGVELWAAEAAYDLQEEYPDLKVAVITPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQF 120 (181)
T ss_dssp CEEEECCC----TTHHHHHHHHHHTTTTTCTTCEEEEEESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHH
T ss_pred cEEEECCC----ccHHHHHHHHHHHhccccCCceEEEEecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHH
Confidence 34555544 588874 5677777778999999888764331 1222334444433322 111
Q ss_pred --ccccccccCceEEecCCC--CCCCh-HHHHHHHc----CCCEEEcCCCCccccccC
Q 043412 253 --PDDGWAPAADVFVLPSRG--EGWGR-PLVEAMSM----GLPVIATNWSGPTEYLTE 301 (383)
Q Consensus 253 --~v~~~~~~adi~v~ps~~--e~~~~-~~~Ea~a~----G~PvI~~~~~g~~e~v~~ 301 (383)
.-..+...+|.++.--.. +|..- .+--|... |.||..-+..+..+++++
T Consensus 121 ~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~~~~~pv~~I~~~~l~~~~~~ 178 (181)
T 2nx2_A 121 KQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRREQDGYPIYFITMDDLRVTVEE 178 (181)
T ss_dssp HHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHC
T ss_pred HHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhccccCCeEEEEcHHHHHHHHhc
Confidence 112456888977655432 22222 23333344 799988776666666554
No 128
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=30.03 E-value=90 Score=27.31 Aligned_cols=67 Identities=12% Similarity=0.175 Sum_probs=42.6
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC--Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE--KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+.++++++-+.+.. .+.. +.++..++. +++..+++ ..|+++..+-...-.-.+.+|+.+|++|++-+
T Consensus 26 ~~~~~~l~av~d~~------~~~~-~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EK 96 (359)
T 3e18_A 26 AADNLEVHGVFDIL------AEKR-EAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEK 96 (359)
T ss_dssp TSTTEEEEEEECSS------HHHH-HHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred hCCCcEEEEEEcCC------HHHH-HHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeC
Confidence 34788887666531 1222 234555653 45566665 78988877654333345789999999999865
No 129
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=29.53 E-value=79 Score=28.15 Aligned_cols=66 Identities=12% Similarity=0.015 Sum_probs=44.0
Q ss_pred CCeEEEE-EeCCCCCCCchHHHHHHHHhhCCCC-----Ccccccccc-------CceEEecCCCCCCChHHHHHHHcCCC
Q 043412 220 DGVVLYL-LTNPYHSGRDFGNKIVNFVEDSDLE-----KPDDGWAPA-------ADVFVLPSRGEGWGRPLVEAMSMGLP 286 (383)
Q Consensus 220 ~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~-------adi~v~ps~~e~~~~~~~Ea~a~G~P 286 (383)
++++++- +.+. ..+..++.++.+++. .++..+++. .|+++..+-...-.-.+.+|+.+|++
T Consensus 38 ~~~~lva~v~d~------~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aGkh 111 (398)
T 3dty_A 38 NTFVLVAGAFDI------DPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAGLH 111 (398)
T ss_dssp GSEEEEEEECCS------SHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTTCE
T ss_pred CCeEEEEEEeCC------CHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCCCe
Confidence 5677764 4432 245566777777773 455667654 89888766543333467899999999
Q ss_pred EEEcC
Q 043412 287 VIATN 291 (383)
Q Consensus 287 vI~~~ 291 (383)
|++=+
T Consensus 112 Vl~EK 116 (398)
T 3dty_A 112 VVCEK 116 (398)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99854
No 130
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=29.23 E-value=2e+02 Score=24.68 Aligned_cols=90 Identities=16% Similarity=0.119 Sum_probs=50.3
Q ss_pred ccccCceEEecCC-CCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCccccc-CCCHHHHH
Q 043412 257 WAPAADVFVLPSR-GEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWA-EPSVDKLR 334 (383)
Q Consensus 257 ~~~~adi~v~ps~-~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~la 334 (383)
-++.||+++.-.. .|+|--.++++.. +.++|....+ .. .+....|- ..+..+-.+|- +.+...++
T Consensus 91 ~l~~ADlvv~nG~~lE~wl~k~~~~~~-~~~~v~~s~g-i~-~~~~~~~~----------~~~~~DPHvWldp~n~~~~a 157 (321)
T 1xvl_A 91 KAQDADLILYNGMNLERWFEQFLGNVK-DVPSVVLTEG-IE-PIPIADGP----------YTDKPNPHAWMSPRNALVYV 157 (321)
T ss_dssp HHHTCSEEEECCTTSSTTHHHHHHTSS-SCCEEETTTT-CC-CCBCCSSS----------STTSBCCCGGGSHHHHHHHH
T ss_pred HHhcCCEEEECCCChHHHHHHHHHhcC-CCcEEEccCC-cc-cccccccC----------CCCCCCCCcCCCHHHHHHHH
Confidence 3468899887653 5777667777665 5666654432 11 11100000 00001223343 33677788
Q ss_pred HHHHHHhc--CHHHHHHHHHHHHHHHH
Q 043412 335 ALMRLVVS--NVDEAKAKGKQAREDMI 359 (383)
Q Consensus 335 ~~i~~ll~--~~~~~~~~~~~a~~~~~ 359 (383)
+.|.+.|. ||+......+|+.++..
T Consensus 158 ~~I~~~L~~~DP~~a~~Y~~Na~~~~~ 184 (321)
T 1xvl_A 158 ENIRQAFVELDPDNAKYYNANAAVYSE 184 (321)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcccHHHHHHHHHHHHH
Confidence 88877765 88877778888777643
No 131
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=29.18 E-value=97 Score=26.66 Aligned_cols=66 Identities=9% Similarity=0.089 Sum_probs=43.9
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Cccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+++++-+.+. ..+..+++++..+.. .++..+++ ..|+++.++-...-.-.+.+|+.+|++|++-+-
T Consensus 28 ~~~l~av~d~------~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EKP 98 (334)
T 3ohs_X 28 EHQVVAVAAR------DLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKP 98 (334)
T ss_dssp TEEEEEEECS------SHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred CeEEEEEEcC------CHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECC
Confidence 4677766653 234556666666663 45566665 689888776543333457889999999998753
No 132
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=29.07 E-value=1.2e+02 Score=25.16 Aligned_cols=62 Identities=15% Similarity=0.199 Sum_probs=39.7
Q ss_pred EEecCCCCCCChHHHHHHHcCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHHH
Q 043412 264 FVLPSRGEGWGRPLVEAMSMGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRAL 336 (383)
Q Consensus 264 ~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~ 336 (383)
.+.+......+.+.+=|-++|+|.|+.-. +..+.+.++.-+.+| +.+|.++..++.+.+.+.
T Consensus 178 givt~~Gg~tSH~AIlAR~lgIPavvg~~-~~~~~~~~G~~v~vD----------g~~G~v~~~p~~~~~~~y 239 (258)
T 1zym_A 178 GFITDAGGRTSHTSIMARSLELPAIVGTG-SVTSQVKNDDYLILD----------AVNNQVYVNPTNEVIDKM 239 (258)
T ss_dssp EEECSCCCSSSHHHHHHHHHTCCEECCCS-CHHHHCCTTCEEEEC----------CSSCCEEESCCHHHHHHH
T ss_pred EEEEcCCCcccHHHHHHHHcCCCEEEech-hHHHhCCCCCEEEEE----------CCCCeEEECcCHHHHHHH
Confidence 33344444556678899999999988643 344445555444444 357888887787766543
No 133
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=28.79 E-value=89 Score=22.32 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=38.2
Q ss_pred cCceEEecCC-CCCCChHHHHHHH---cCCCEEEcCCCCccc----cccCC-CceeeecccccccccCCCCcccccCCCH
Q 043412 260 AADVFVLPSR-GEGWGRPLVEAMS---MGLPVIATNWSGPTE----YLTEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSV 330 (383)
Q Consensus 260 ~adi~v~ps~-~e~~~~~~~Ea~a---~G~PvI~~~~~g~~e----~v~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (383)
..|++++-.. .+.-|..+++.+. ..+|+|.-......+ .+..+ .+++. .+.+.
T Consensus 49 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~------------------kp~~~ 110 (143)
T 3jte_A 49 SIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLR------------------KPVTA 110 (143)
T ss_dssp TCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEE------------------SSCCH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEe------------------CCCCH
Confidence 4576665432 3444566665554 367766544322222 22233 33444 44499
Q ss_pred HHHHHHHHHHhcCHH
Q 043412 331 DKLRALMRLVVSNVD 345 (383)
Q Consensus 331 ~~la~~i~~ll~~~~ 345 (383)
+++.++|..++....
T Consensus 111 ~~l~~~l~~~~~~~~ 125 (143)
T 3jte_A 111 QDLSIAINNAINRKK 125 (143)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999886443
No 134
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=27.18 E-value=1.7e+02 Score=20.73 Aligned_cols=70 Identities=13% Similarity=0.083 Sum_probs=38.2
Q ss_pred cCceEEecCCC-C-CCChHHHHHHH--cCCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCCCHHHHHH
Q 043412 260 AADVFVLPSRG-E-GWGRPLVEAMS--MGLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRA 335 (383)
Q Consensus 260 ~adi~v~ps~~-e-~~~~~~~Ea~a--~G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~ 335 (383)
..|++++-... + .-|..+++.+. ..+|+|.-......+..... ...+..+++..+.+.+++.+
T Consensus 50 ~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~-------------~~~g~~~~l~KP~~~~~l~~ 116 (140)
T 3h5i_A 50 YPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEPAVVEKI-------------RSVTAYGYVMKSATEQVLIT 116 (140)
T ss_dssp CCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGG-------------GGSCEEEEEETTCCHHHHHH
T ss_pred CCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHH-------------HhCCCcEEEeCCCCHHHHHH
Confidence 35777654332 2 44556666554 47887765433222222210 01112344455559999999
Q ss_pred HHHHHhc
Q 043412 336 LMRLVVS 342 (383)
Q Consensus 336 ~i~~ll~ 342 (383)
+|..++.
T Consensus 117 ~i~~~l~ 123 (140)
T 3h5i_A 117 IVEMALR 123 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
No 135
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=27.10 E-value=1.3e+02 Score=21.12 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=30.9
Q ss_pred HHHHHHHhhCCCC--------CccccccccCceEEecCCCCCCChHHHHHHHc--CCCEEEcCC
Q 043412 239 NKIVNFVEDSDLE--------KPDDGWAPAADVFVLPSRGEGWGRPLVEAMSM--GLPVIATNW 292 (383)
Q Consensus 239 ~~~~~~~~~~~~~--------~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~--G~PvI~~~~ 292 (383)
..+++.+++.|+. .++.......|++++..-. .+-..-++..+- |+||.+.+-
T Consensus 24 ~km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV-~y~~~~ik~~~~~~~ipV~vI~~ 86 (108)
T 3nbm_A 24 NAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQV-RSYYREMKVDAERLGIQIVATRG 86 (108)
T ss_dssp HHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGG-GGGHHHHHHHHTTTTCEEEECCH
T ss_pred HHHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHH-HHHHHHHHHHhhhcCCcEEEeCH
Confidence 5555666666664 2234555778988765321 122344555544 899988874
No 136
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=25.64 E-value=66 Score=28.02 Aligned_cols=88 Identities=15% Similarity=0.098 Sum_probs=50.3
Q ss_pred CCCCCCcEEEEEeecc--ccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHH-HHhhCCCCCcccccccc
Q 043412 184 MNTSSKEFVFLSVFKW--EYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVN-FVEDSDLEKPDDGWAPA 260 (383)
Q Consensus 184 ~~~~~~~~~i~~~g~~--~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~ 260 (383)
+++ ..++-++..|.+ ...++.+.+.+|+..++++.|++ .+.|.- +...-+.. ..+..+... .+-..
T Consensus 202 ~Gi-~PrVAlLs~~~~G~e~~~~~~~i~~A~~llk~~~~~~--~v~Gpl-----~~D~a~~~~~~~~k~~~s---~~~G~ 270 (337)
T 1r5j_A 202 FDI-DPKIAMLSFSTKGSGKAPQVDKVREATEIATGLNPDL--ALDGEL-----QFDAAFVPETAAIKAPDS---AVAGQ 270 (337)
T ss_dssp TTC-CCCEEEECSCSTTSSCSHHHHHHHHHHHHHHHHCTTS--CEEEEE-----CHHHHHCHHHHHHHSCSC---SSTTC
T ss_pred cCC-CCeEEEEecCccCCCCCCCcHHHHHHHHHHhccCCCc--EEEecC-----cHHHhcCHHHHHhhCCCC---ccCCC
Confidence 345 667777777443 34566777888888887665554 455643 22333322 222333322 23367
Q ss_pred CceEEecCCC-CCCChHHHHHHH
Q 043412 261 ADVFVLPSRG-EGWGRPLVEAMS 282 (383)
Q Consensus 261 adi~v~ps~~-e~~~~~~~Ea~a 282 (383)
+|++|+|... ...++++++-+.
T Consensus 271 aDvlv~p~~d~GnI~~K~l~~~~ 293 (337)
T 1r5j_A 271 ANTFVFPDLQSGNIGYKIAQRLG 293 (337)
T ss_dssp CCEEECSSHHHHHHHHHHHHHTT
T ss_pred CCEEEECChHHHHHHHHHHHHhc
Confidence 9999999863 334556666544
No 137
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=25.28 E-value=1.1e+02 Score=26.82 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=35.8
Q ss_pred hHHHHHHHHhhCCCC--------Cccccccc-cCceEEecCCCCCCChHHHHHHH-cCCCEEEcCCC
Q 043412 237 FGNKIVNFVEDSDLE--------KPDDGWAP-AADVFVLPSRGEGWGRPLVEAMS-MGLPVIATNWS 293 (383)
Q Consensus 237 ~~~~~~~~~~~~~~~--------~~v~~~~~-~adi~v~ps~~e~~~~~~~Ea~a-~G~PvI~~~~~ 293 (383)
....+.+.+++.|+. +.+..+-. .+|++=.+|. +-....++++++ .|+|||.+.-.
T Consensus 92 ~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~-~~~n~~LL~~va~~gkPviLstGm 157 (349)
T 2wqp_A 92 DEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIPAYKIGSG-ECNNYPLIKLVASFGKPIILSTGM 157 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSCEEECGG-GTTCHHHHHHHHTTCSCEEEECTT
T ss_pred HHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCCEEEECcc-cccCHHHHHHHHhcCCeEEEECCC
Confidence 345666777777774 12222322 2577777774 455677888766 69999998753
No 138
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=24.97 E-value=1.8e+02 Score=20.38 Aligned_cols=63 Identities=11% Similarity=0.131 Sum_probs=38.4
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCC-hHHHHHHHcCCCEEE
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWG-RPLVEAMSMGLPVIA 289 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~-~~~~Ea~a~G~PvI~ 289 (383)
....++|.|.-. .-.+++++++++.+|-. -...+=...|++|.-.. .| .++-.|...|+|||.
T Consensus 34 ~G~~~v~TG~l~---~~~R~e~~~~i~~~Gg~-v~~sVSkkTd~LV~G~~---~g~sK~~kA~~lgI~Ii~ 97 (109)
T 2k6g_A 34 EGLIFVITGVLE---SIERDEAKSLIERYGGK-VTGNVSKKTNYLVMGRD---SGQSKSDKAAALGTKIID 97 (109)
T ss_dssp TTCEEEEESBCS---SCCHHHHHHHHHHTTCE-EESSCCTTCCEEEECBC---CCHHHHHHHHHHTCEEEC
T ss_pred CCCEEEEeeeCC---CCCHHHHHHHHHHcCCE-eeCcccCCceEEEECCC---CChHHHHHHHHcCCeEEe
Confidence 356777777541 12367777788777753 11223356677776532 24 678888888888874
No 139
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=24.59 E-value=3.1e+02 Score=22.88 Aligned_cols=92 Identities=17% Similarity=0.032 Sum_probs=49.7
Q ss_pred cccCHHHHHHHHHHHhc---cCCCeEEEEEeCCCC--CC----------CchHHHHHHHHhhCCCC--------Cccccc
Q 043412 201 YRKGWDVLLKAYLEEFS---KADGVVLYLLTNPYH--SG----------RDFGNKIVNFVEDSDLE--------KPDDGW 257 (383)
Q Consensus 201 ~~K~~~~ll~a~~~l~~---~~~~~~l~i~G~~~~--~~----------~~~~~~~~~~~~~~~~~--------~~v~~~ 257 (383)
...+.+.+++.+.++++ +..++.+++-+.-.. +. ..-...+.+..++.|+. ..+..+
T Consensus 12 sie~~~~~~~~A~~l~~~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l 91 (267)
T 2nwr_A 12 AIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPV 91 (267)
T ss_dssp BCSCHHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHhhcCccEEEeeccccCCCCCCCCCcCccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHH
Confidence 33455666666555544 444556666532211 11 11124455666777775 223344
Q ss_pred cccCceEEecCCCCCCChHHHH-HHHcCCCEEEcCCC
Q 043412 258 APAADVFVLPSRGEGWGRPLVE-AMSMGLPVIATNWS 293 (383)
Q Consensus 258 ~~~adi~v~ps~~e~~~~~~~E-a~a~G~PvI~~~~~ 293 (383)
...+|++-.++.. .-...+++ +...|+||+.++-.
T Consensus 92 ~~~vd~~~IgA~~-~rn~~ll~~~a~~~~PV~lK~G~ 127 (267)
T 2nwr_A 92 AEVADIIQIPAFL-CRQTDLLLAAAKTGRAVNVKKGQ 127 (267)
T ss_dssp HTTCSEEEECGGG-TTCHHHHHHHHTTTSEEEEECCT
T ss_pred HhcCCEEEECccc-ccCHHHHHHHHcCCCcEEEeCCC
Confidence 4568999888842 11222444 44579999999874
No 140
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=24.55 E-value=1.9e+02 Score=20.35 Aligned_cols=66 Identities=9% Similarity=0.056 Sum_probs=39.4
Q ss_pred CceEEecCC-CCCCChHHHHHHHc-----CCCEEEcCCCCcc-----ccccCCCceeeecccccccccCCCCcccccCCC
Q 043412 261 ADVFVLPSR-GEGWGRPLVEAMSM-----GLPVIATNWSGPT-----EYLTEENGYPLLVGRMSEVTEGPFKGHFWAEPS 329 (383)
Q Consensus 261 adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~~~~~g~~-----e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 329 (383)
.|++++-.. .+.-|..+++.+.. .+|+|.-...... +....+ ..+++..+.+
T Consensus 51 ~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g-----------------~~~~l~kP~~ 113 (140)
T 3grc_A 51 YAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLA-----------------VSTWLEKPID 113 (140)
T ss_dssp CSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTC-----------------CCEEECSSCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcC-----------------CCEEEeCCCC
Confidence 477776533 34456777777664 6787765443222 222223 2344444559
Q ss_pred HHHHHHHHHHHhcC
Q 043412 330 VDKLRALMRLVVSN 343 (383)
Q Consensus 330 ~~~la~~i~~ll~~ 343 (383)
.+++.+++..+++.
T Consensus 114 ~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 114 ENLLILSLHRAIDN 127 (140)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998763
No 141
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=24.44 E-value=1.9e+02 Score=20.46 Aligned_cols=70 Identities=10% Similarity=0.058 Sum_probs=40.6
Q ss_pred cCceEEecCC-CCCCChHHHHHHHc-----CCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCC-CHHH
Q 043412 260 AADVFVLPSR-GEGWGRPLVEAMSM-----GLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEP-SVDK 332 (383)
Q Consensus 260 ~adi~v~ps~-~e~~~~~~~Ea~a~-----G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 332 (383)
..|++++-.. .+.-|..+++.+.. .+|+|........+.... ....+..+++..+. +.++
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~-------------~~~~ga~~~l~Kp~~~~~~ 117 (144)
T 3kht_A 51 KYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQ-------------CMAAGASSVVDKSSNNVTD 117 (144)
T ss_dssp CCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHH-------------HHHTTCSEEEECCTTSHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHH-------------HHHcCCCEEEECCCCcHHH
Confidence 3577776533 34456777777764 678776544322222211 01111345566667 8999
Q ss_pred HHHHHHHHhc
Q 043412 333 LRALMRLVVS 342 (383)
Q Consensus 333 la~~i~~ll~ 342 (383)
+.++|..+++
T Consensus 118 l~~~i~~~l~ 127 (144)
T 3kht_A 118 FYGRIYAIFS 127 (144)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988865
No 142
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=24.38 E-value=2.2e+02 Score=25.26 Aligned_cols=71 Identities=13% Similarity=0.168 Sum_probs=41.8
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------------CccccccccCceEEec--CCCC----CC---
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------------KPDDGWAPAADVFVLP--SRGE----GW--- 273 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~adi~v~p--s~~e----~~--- 273 (383)
.+-++-|+|-| .....+.+.+...|.. ..+..+++.||++++. ...+ ..
T Consensus 118 ~gktvGIIGlG-----~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li 192 (381)
T 3oet_A 118 RDRTIGIVGVG-----NVGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLA 192 (381)
T ss_dssp GGCEEEEECCS-----HHHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSB
T ss_pred CCCEEEEEeEC-----HHHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhc
Confidence 35678888887 5566666666665543 2344667889987743 3333 33
Q ss_pred ChHHHHHHHcCCCEEEcCCCCc
Q 043412 274 GRPLVEAMSMGLPVIATNWSGP 295 (383)
Q Consensus 274 ~~~~~Ea~a~G~PvI~~~~~g~ 295 (383)
+-..++.|--|.-+|-+.-|+.
T Consensus 193 ~~~~l~~mk~gailIN~aRG~v 214 (381)
T 3oet_A 193 DETLIRRLKPGAILINACRGPV 214 (381)
T ss_dssp CHHHHHHSCTTEEEEECSCGGG
T ss_pred CHHHHhcCCCCcEEEECCCCcc
Confidence 3345666656665665555543
No 143
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=24.15 E-value=1e+02 Score=26.86 Aligned_cols=66 Identities=9% Similarity=0.088 Sum_probs=41.3
Q ss_pred ccCCCeEEEEEeCCCCCCCchHHHHHHHHhhC-CC--CCccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 217 SKADGVVLYLLTNPYHSGRDFGNKIVNFVEDS-DL--EKPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 217 ~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~-~~--~~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
.+.|+++++-+.+. . .+.. .+.. +. ..++..+++ ..|+++.++-...-.-.+.+|+..|++|++-+
T Consensus 26 ~~~~~~~l~av~d~-----~-~~~~---~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EK 96 (358)
T 3gdo_A 26 DVLDEYQISKIMTS-----R-TEEV---KRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEK 96 (358)
T ss_dssp TTCTTEEEEEEECS-----C-HHHH---HHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEES
T ss_pred hhCCCeEEEEEEcC-----C-HHHH---HhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEec
Confidence 34578888877654 1 1222 2233 22 255566666 68888877654433446789999999999854
No 144
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=24.10 E-value=1.7e+02 Score=24.19 Aligned_cols=83 Identities=17% Similarity=0.270 Sum_probs=46.9
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps~ 269 (383)
.|-+..+.+|+.-+..-...-+++++|.. ......+.+.+...|.. .....-+..=|+++...-
T Consensus 85 ~kT~~~L~~A~~~i~~~~~~~~iLfVgTk----~~aq~~V~~~A~~~g~~yv~~RWlgG~LTN~~~~~f~~PdlliV~Dp 160 (253)
T 3bch_A 85 KRTWEKLLLAARAIVAIENPADVSVISSR----NTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDP 160 (253)
T ss_dssp HHHHHHHHHHHHHHHTCSSGGGEEEEECS----HHHHHHHHHHHHHHCCEEEESCCCTTTTTCCSCSTTCSCSEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeCC----HHHHHHHHHHHHHhCCeeecceecCCcccCccccccCCCCEEEEECC
Confidence 35555666666655522234567778864 12234455555554432 111222345566665542
Q ss_pred -CCCCChHHHHHHHcCCCEEEc
Q 043412 270 -GEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 270 -~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
.| -..+.||...|+|||+-
T Consensus 161 ~~e--~~AI~EA~~lgIPvIal 180 (253)
T 3bch_A 161 RAD--HQPLTEASYVNLPTIAL 180 (253)
T ss_dssp TTT--HHHHHHHHHTTCCEEEE
T ss_pred Ccc--chHHHHHHHhCCCEEEE
Confidence 23 36899999999999986
No 145
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=24.05 E-value=2.2e+02 Score=26.90 Aligned_cols=33 Identities=15% Similarity=0.205 Sum_probs=25.9
Q ss_pred cCceEEecCC-CCCCChHHHHHHH--cCCCEEEcCC
Q 043412 260 AADVFVLPSR-GEGWGRPLVEAMS--MGLPVIATNW 292 (383)
Q Consensus 260 ~adi~v~ps~-~e~~~~~~~Ea~a--~G~PvI~~~~ 292 (383)
.+|+++-.|. ...|.--++++|+ +..|||-.-.
T Consensus 398 kpdVlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS 433 (605)
T 1o0s_A 398 RPGALIGASTVRGAFNEEVIRAMAEINERPIIFALS 433 (605)
T ss_dssp CCSEEEECSSCTTCSCHHHHHHHHHHCSSCEEEECC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC
Confidence 4999999885 5778888999999 4777776644
No 146
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=24.00 E-value=74 Score=27.08 Aligned_cols=102 Identities=5% Similarity=0.030 Sum_probs=58.0
Q ss_pred cEEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCC---------------cc
Q 043412 190 EFVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEK---------------PD 254 (383)
Q Consensus 190 ~~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~---------------~v 254 (383)
..+++.-|..+.. +-..+++.+-++.. .++.++.++.........+.+.+.+..+.+|..+ ++
T Consensus 27 g~l~iiGGgedk~-~~~~i~~~~v~lag-g~~~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~ 104 (291)
T 3en0_A 27 PAILIIGGAEDKV-HGREILQTFWSRSG-GNDAIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGY 104 (291)
T ss_dssp CCEEEECSSCCSS-SCCHHHHHHHHHTT-GGGCEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHH
T ss_pred ceEEEEECCCCcc-ChHHHHHHHHHHcC-CCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHH
Confidence 3445555544322 22344555444433 2456777776543322344566777777777731 11
Q ss_pred ccccccCceEEecCC--------CCCCCh--HHHHHHHcC-CCEEEcCCC
Q 043412 255 DGWAPAADVFVLPSR--------GEGWGR--PLVEAMSMG-LPVIATNWS 293 (383)
Q Consensus 255 ~~~~~~adi~v~ps~--------~e~~~~--~~~Ea~a~G-~PvI~~~~~ 293 (383)
...+..||+++++-- +...++ .+.|+...| +|++.+..|
T Consensus 105 ~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAG 154 (291)
T 3en0_A 105 RLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAG 154 (291)
T ss_dssp HHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHH
T ss_pred HHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHH
Confidence 345688999887741 222333 577888899 899888765
No 147
>3iz6_A 40S ribosomal protein SA (S2P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=23.81 E-value=1.9e+02 Score=24.56 Aligned_cols=83 Identities=13% Similarity=0.147 Sum_probs=46.0
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps~ 269 (383)
.|-+..|.+|+.-+..-...-+++++|.. ......+.+.+...|.. ......+..=|+++...-
T Consensus 56 ~kT~e~L~~Aa~~I~~i~~~~~ILfVgTk----~~aq~aV~k~A~~tG~~yV~~RWlgGtLTN~~t~~f~ePdllvV~Dp 131 (305)
T 3iz6_A 56 GKTWEKLQLAARVIVAIENPQDIIVQSAR----PYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131 (305)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEECCS----HHHHHHHHHHHHHHTCEEECSCCCTTTTTTTTTSCSSCCSEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEeCc----HHHHHHHHHHHHHhCCccccCcccCCcccCcccccccCCceeEEeCc
Confidence 34455566666544432223467778764 12234444555543321 222233456677776643
Q ss_pred -CCCCChHHHHHHHcCCCEEEc
Q 043412 270 -GEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 270 -~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
.| -..+.||...|+|+|+-
T Consensus 132 ~~d--~qAI~EA~~lnIPtIAL 151 (305)
T 3iz6_A 132 RTD--HQPIKESALGNIPTIAF 151 (305)
T ss_dssp TTT--HHHHHHHHHHTCCEEEE
T ss_pred ccc--hHHHHHHHHcCCCEEEE
Confidence 23 35789999999999974
No 148
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=23.71 E-value=61 Score=28.40 Aligned_cols=69 Identities=10% Similarity=-0.080 Sum_probs=42.9
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC---Ccccccccc--CceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE---KPDDGWAPA--ADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~--adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
+.++++++-+.+. ..+..+...+.++.. +++..+++. .|+++..+-...-.-.+.+|+..|++|++-+-
T Consensus 27 ~~~~~~l~av~d~------~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP 100 (359)
T 3m2t_A 27 QMQDIRIVAACDS------DLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKP 100 (359)
T ss_dssp TCTTEEEEEEECS------SHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEECSC
T ss_pred hCCCcEEEEEEcC------CHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECC
Confidence 3478888866543 234444555555332 455666664 48888776433233457889999999998653
No 149
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=23.56 E-value=84 Score=27.57 Aligned_cols=68 Identities=15% Similarity=0.162 Sum_probs=40.4
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccc--cCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
+.|+++++-+.+.. .+.............++..+++ ..|+++..+-...-.-.+.+|+..|++|++-.
T Consensus 29 ~~~~~~l~av~d~~------~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~EK 98 (364)
T 3e82_A 29 SVPGLNLAFVASRD------EEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDK 98 (364)
T ss_dssp TSTTEEEEEEECSC------HHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEECS
T ss_pred hCCCeEEEEEEcCC------HHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEeC
Confidence 45788888666541 1222211111111245566666 68888877654333345789999999999865
No 150
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.48 E-value=2.5e+02 Score=21.98 Aligned_cols=99 Identities=10% Similarity=0.052 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCC
Q 043412 206 DVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGL 285 (383)
Q Consensus 206 ~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~ 285 (383)
..+++++.+.++... ++-++|-+ .....+..+..-+++. -..+...+..| .-..+.++..-|+
T Consensus 81 ~Dil~al~~a~~~~~--kIavvg~~-----~~~~~~~~~~~ll~~~---------i~~~~~~~~~e-~~~~i~~l~~~G~ 143 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGN--ELALIAYK-----HSIVDKHEIEAMLGVK---------IKEFLFSSEDE-ITTLISKVKTENI 143 (196)
T ss_dssp HHHHHHHHHHGGGCS--EEEEEEES-----SCSSCHHHHHHHHTCE---------EEEEEECSGGG-HHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHhhCC--cEEEEeCc-----chhhHHHHHHHHhCCc---------eEEEEeCCHHH-HHHHHHHHHHCCC
Confidence 456778877765443 66666654 2223344444444542 11111112111 1234555666666
Q ss_pred CEEEcCCCCccccccC-C-CceeeecccccccccCCCCcccccCCCHHHHHHHHHHHh
Q 043412 286 PVIATNWSGPTEYLTE-E-NGYPLLVGRMSEVTEGPFKGHFWAEPSVDKLRALMRLVV 341 (383)
Q Consensus 286 PvI~~~~~g~~e~v~~-~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~la~~i~~ll 341 (383)
=+|..+... .++-+. + +++++.+ +.+++.+++++.+
T Consensus 144 ~vvVG~~~~-~~~A~~~Gl~~vli~s-------------------g~eSI~~Ai~eA~ 181 (196)
T 2q5c_A 144 KIVVSGKTV-TDEAIKQGLYGETINS-------------------GEESLRRAIEEAL 181 (196)
T ss_dssp CEEEECHHH-HHHHHHTTCEEEECCC-------------------CHHHHHHHHHHHH
T ss_pred eEEECCHHH-HHHHHHcCCcEEEEec-------------------CHHHHHHHHHHHH
Confidence 665554321 111211 2 3333332 5888888888764
No 151
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=23.08 E-value=1.3e+02 Score=24.73 Aligned_cols=34 Identities=9% Similarity=-0.003 Sum_probs=22.4
Q ss_pred cCceEEecCCCCCCChHHHHHHHcCCCEEEcCCC
Q 043412 260 AADVFVLPSRGEGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 260 ~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
.+|+++--+..+..--.+..++..|+|+|+...|
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred CCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 6798885554444433445668889998886654
No 152
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.99 E-value=1.7e+02 Score=24.97 Aligned_cols=66 Identities=17% Similarity=0.151 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHhcccCCCceeeeecCCCcccchhhcCCChhhh--------hHHHHHHhhhcCCCccEEEecC
Q 043412 11 SSESWSYILALNEHVKNPRFKLAIEHHGDLQSLQFWEGLPHHMR--------NLAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 11 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~pDiV~~~~ 76 (383)
++-...+....+.......+...+..+.+........++|.... ..-..+.+.+++.+||+|++-.
T Consensus 116 g~nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~DliVlag 189 (302)
T 3o1l_A 116 SHCLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDIPYYHVPVDPKDKEPAFAEVSRLVGHHQADVVVLAR 189 (302)
T ss_dssp CHHHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTCCEEECCCCSSCCHHHHHHHHHHHHHTTCSEEEESS
T ss_pred chhHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCCCEEEcCCCcCCHHHHHHHHHHHHHHhCCCEEEHhH
Confidence 34556666666543333456667776766543333335553211 1234577888999999999974
No 153
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=22.65 E-value=50 Score=25.01 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=22.9
Q ss_pred cccccCceEEecCCCCCCChHHHH---HHHcCCCEEEc
Q 043412 256 GWAPAADVFVLPSRGEGWGRPLVE---AMSMGLPVIAT 290 (383)
Q Consensus 256 ~~~~~adi~v~ps~~e~~~~~~~E---a~a~G~PvI~~ 290 (383)
..++.||+++.--. +.-.-+..| |.+.|+||++-
T Consensus 64 ~~i~~aD~vvA~l~-~~d~Gt~~EiG~A~algkPV~~l 100 (152)
T 4fyk_A 64 NWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCL 100 (152)
T ss_dssp HHHHHCSEEEEECS-SCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHCCEEEEeCC-CCCCCHHHHHHHHHHcCCeEEEE
Confidence 56689999886432 323334444 68899999993
No 154
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=22.11 E-value=2.4e+02 Score=26.41 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=25.7
Q ss_pred cCceEEecCC-CCCCChHHHHHHHc--CCCEEEcCC
Q 043412 260 AADVFVLPSR-GEGWGRPLVEAMSM--GLPVIATNW 292 (383)
Q Consensus 260 ~adi~v~ps~-~e~~~~~~~Ea~a~--G~PvI~~~~ 292 (383)
.+|+++-.|. ...|.--++++|+. ..|||-.-.
T Consensus 360 kp~vlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLS 395 (555)
T 1gq2_A 360 KPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALS 395 (555)
T ss_dssp CCSEEEECSCCTTCSCHHHHHHHHHHCSSCEEEECC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHhcCCCCEEEECC
Confidence 4999999885 57788889999994 777776544
No 155
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=21.85 E-value=2e+02 Score=23.80 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=47.1
Q ss_pred ccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC------------CccccccccCceEEecCC
Q 043412 202 RKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE------------KPDDGWAPAADVFVLPSR 269 (383)
Q Consensus 202 ~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~adi~v~ps~ 269 (383)
.|-+..|..|+.-+..-...-+++++|.. ......+.+.+...|-. .....-+..=|+++...-
T Consensus 51 ~kT~~~L~~A~~~i~~i~~~~~vlfVgTk----~~~q~~V~k~A~~~g~~~v~~rwlgGtLTN~~t~~f~~PdllvV~Dp 126 (252)
T 3u5c_A 51 GKTWEKLVLAARIIAAIPNPEDVVAISSR----TFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDP 126 (252)
T ss_dssp HHHHHHHHHHHHHHTTSSSGGGEEEEECS----HHHHHHHHHHHHHSSCEEEESCCCTTSSSCTTSTTCCCCSEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHhcCCEEEEEeCC----cHHHHHHHHHHHHhCCceecCcccCCcccChhhhhccCCceEEEeCC
Confidence 35556666666555432234467778864 12334455566555431 112222345577666542
Q ss_pred -CCCCChHHHHHHHcCCCEEEc
Q 043412 270 -GEGWGRPLVEAMSMGLPVIAT 290 (383)
Q Consensus 270 -~e~~~~~~~Ea~a~G~PvI~~ 290 (383)
.| -..+.||...|+|+|+-
T Consensus 127 ~~d--~~ai~EA~~l~IP~Ial 146 (252)
T 3u5c_A 127 RSD--AQAIKEASYVNIPVIAL 146 (252)
T ss_dssp TTT--HHHHHHHHTTTCCEEEE
T ss_pred ccc--hHHHHHHHHcCCCEEEE
Confidence 23 36789999999999974
No 156
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=21.53 E-value=1.5e+02 Score=25.77 Aligned_cols=43 Identities=23% Similarity=0.200 Sum_probs=25.6
Q ss_pred CccccccccCceEEe--cCCCCCCCh---HHHHHHHcCCCEEEcCCCC
Q 043412 252 KPDDGWAPAADVFVL--PSRGEGWGR---PLVEAMSMGLPVIATNWSG 294 (383)
Q Consensus 252 ~~v~~~~~~adi~v~--ps~~e~~~~---~~~Ea~a~G~PvI~~~~~g 294 (383)
..+..+++.||++++ |...++.++ ..+..|--|.-+|-+.-|+
T Consensus 186 ~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~ 233 (334)
T 3kb6_A 186 TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGK 233 (334)
T ss_dssp CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGG
T ss_pred cCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccc
Confidence 345678899998774 444455444 5555555555555554443
No 157
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=21.52 E-value=51 Score=26.73 Aligned_cols=61 Identities=10% Similarity=0.158 Sum_probs=40.4
Q ss_pred CeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcCC
Q 043412 221 GVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATNW 292 (383)
Q Consensus 221 ~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~~ 292 (383)
++++++.|-.+. + ..+.++.+|.. +..-...+..+|.+... -..+++.|+++|+|||..++
T Consensus 8 ~~~v~fSG~~~~---~----~~~~i~~lGg~--v~~~~~~~THlV~~~~~--RT~K~l~Aia~g~~IVs~~W 68 (220)
T 3l41_A 8 RVYITFTGYDKK---P----SIDNLKKLDMS--ITSNPSKCTHLIAPRIL--RTSKFLCSIPYGPCVVTMDW 68 (220)
T ss_dssp CEEEEECSCSSC---C----CCGGGGGGTEE--ECSCTTTCSEEECSSCC--CBHHHHHHGGGCCEEECHHH
T ss_pred eEEEEEeccCCC---C----CcchHhhccee--eccCchhhhhhhhhhHh--hhcceeecCCCCCeEEEhHH
Confidence 567777765421 1 25666677653 11113568888887532 24799999999999999976
No 158
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=21.43 E-value=1.9e+02 Score=20.28 Aligned_cols=67 Identities=12% Similarity=0.040 Sum_probs=36.4
Q ss_pred CceEEecCCCCCCChHHHHHHH--c-CCCEEEcCCCCccccccCCCceeeecccccccccCCCCcccccCC-CHHHHHHH
Q 043412 261 ADVFVLPSRGEGWGRPLVEAMS--M-GLPVIATNWSGPTEYLTEENGYPLLVGRMSEVTEGPFKGHFWAEP-SVDKLRAL 336 (383)
Q Consensus 261 adi~v~ps~~e~~~~~~~Ea~a--~-G~PvI~~~~~g~~e~v~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~la~~ 336 (383)
.|++++|. .-|+.+++.+. . .+|+|.-......+.... ....+..+++..+. +.+++.++
T Consensus 63 ~dlvi~~~---~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~-------------~~~~g~~~~l~kP~~~~~~l~~~ 126 (137)
T 2pln_A 63 YDLVMVSD---KNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVH-------------AFEQGADDYIAKPYRSIKALVAR 126 (137)
T ss_dssp CSEEEECS---TTHHHHHHHHHHHSTTSEEEEEESSCCHHHHHH-------------HHHTTCSEEEESSCSCHHHHHHH
T ss_pred CCEEEEcC---ccHHHHHHHHHhcCCCccEEEEeCCCCHHHHHH-------------HHHcCCceeeeCCCCCHHHHHHH
Confidence 46766332 23455565554 3 778776533222222211 01112345666677 89999999
Q ss_pred HHHHhcC
Q 043412 337 MRLVVSN 343 (383)
Q Consensus 337 i~~ll~~ 343 (383)
|..++..
T Consensus 127 i~~~~~~ 133 (137)
T 2pln_A 127 IEARLRF 133 (137)
T ss_dssp HHHHTC-
T ss_pred HHHHHhh
Confidence 9988763
No 159
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=20.87 E-value=98 Score=24.69 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=46.2
Q ss_pred CeEEEEEeCCC--CCCCchHHHHHHHHhhCCCCCcc-----------ccccccCceEEecCCCCC---------CCh--H
Q 043412 221 GVVLYLLTNPY--HSGRDFGNKIVNFVEDSDLEKPD-----------DGWAPAADVFVLPSRGEG---------WGR--P 276 (383)
Q Consensus 221 ~~~l~i~G~~~--~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~~adi~v~ps~~e~---------~~~--~ 276 (383)
..++.++.... ++..++...+.+..+.+|..-.+ ...+..||.+++|- .+. .|+ .
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~G-G~~~~l~~~L~~~gl~~~ 105 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTG-GNTFFLLQELKRTGADKL 105 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEEECC-SCHHHHHHHHHHHTHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEEECC-CCHHHHHHHHHHCChHHH
Confidence 35666665332 22234667777888888874111 14568899999886 221 232 5
Q ss_pred HHHHHHcCCCEEEcCCC
Q 043412 277 LVEAMSMGLPVIATNWS 293 (383)
Q Consensus 277 ~~Ea~a~G~PvI~~~~~ 293 (383)
+.|+...|+|++.+..|
T Consensus 106 l~~~~~~G~p~~G~sAG 122 (206)
T 3l4e_A 106 ILEEIAAGKLYIGESAG 122 (206)
T ss_dssp HHHHHHTTCEEEEETHH
T ss_pred HHHHHHcCCeEEEECHH
Confidence 77888899999998764
No 160
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=20.74 E-value=2.6e+02 Score=24.71 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=35.2
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----------------CccccccccCceEEec--CCCC----CC---
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----------------KPDDGWAPAADVFVLP--SRGE----GW--- 273 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~adi~v~p--s~~e----~~--- 273 (383)
.+-++-|+|-| .....+.+.+...|.. ..+..+++.||++++. ...+ ..
T Consensus 115 ~g~tvGIIGlG-----~IG~~vA~~l~~~G~~V~~~d~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li 189 (380)
T 2o4c_A 115 AERTYGVVGAG-----QVGGRLVEVLRGLGWKVLVCDPPRQAREPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLL 189 (380)
T ss_dssp GGCEEEEECCS-----HHHHHHHHHHHHTTCEEEEECHHHHHHSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSB
T ss_pred CCCEEEEEeCC-----HHHHHHHHHHHHCCCEEEEEcCChhhhccCcccCCHHHHHHhCCEEEEeccCccccccchhhhc
Confidence 45567777766 4444454444444432 2344566788877653 2222 22
Q ss_pred ChHHHHHHHcCCCEEEcCCC
Q 043412 274 GRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 274 ~~~~~Ea~a~G~PvI~~~~~ 293 (383)
+-..++.|--|.-+|-+..|
T Consensus 190 ~~~~l~~mk~gailIN~sRG 209 (380)
T 2o4c_A 190 DEPRLAALRPGTWLVNASRG 209 (380)
T ss_dssp CHHHHHTSCTTEEEEECSCG
T ss_pred CHHHHhhCCCCcEEEECCCC
Confidence 22355555555545544444
No 161
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=20.60 E-value=69 Score=27.38 Aligned_cols=86 Identities=9% Similarity=0.173 Sum_probs=46.4
Q ss_pred EEEEEeeccccccCHHHHHHHHHHHhccCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccc--cCceEEecC
Q 043412 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAP--AADVFVLPS 268 (383)
Q Consensus 191 ~~i~~~g~~~~~K~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~adi~v~ps 268 (383)
+-|+..|++.. .+++++.+ .++++++.+.+.. .+..+...+......+...+++ .+|+++..+
T Consensus 13 igiIG~G~~g~-----~~~~~l~~----~~~~~~v~v~d~~------~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~t 77 (315)
T 3c1a_A 13 LALIGAGRWGK-----NYIRTIAG----LPGAALVRLASSN------PDNLALVPPGCVIESDWRSVVSAPEVEAVIIAT 77 (315)
T ss_dssp EEEEECTTTTT-----THHHHHHH----CTTEEEEEEEESC------HHHHTTCCTTCEEESSTHHHHTCTTCCEEEEES
T ss_pred EEEECCcHHHH-----HHHHHHHh----CCCcEEEEEEeCC------HHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeC
Confidence 44555566542 23444433 3677777554431 1222222221111234455564 789888776
Q ss_pred CCCCCChHHHHHHHcCCCEEEcC
Q 043412 269 RGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 269 ~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
....-.-.+.+|+..|++|++-+
T Consensus 78 p~~~h~~~~~~al~~Gk~v~~eK 100 (315)
T 3c1a_A 78 PPATHAEITLAAIASGKAVLVEK 100 (315)
T ss_dssp CGGGHHHHHHHHHHTTCEEEEES
T ss_pred ChHHHHHHHHHHHHCCCcEEEcC
Confidence 54433446778899999999764
No 162
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.54 E-value=2.3e+02 Score=19.98 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=42.1
Q ss_pred CCeEEEEEeCCCCCCCchHHHHHHHHhhCCCCCccccccccCceEEecCCCCCCChHHHHHHHcCCCEEEcC
Q 043412 220 DGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLEKPDDGWAPAADVFVLPSRGEGWGRPLVEAMSMGLPVIATN 291 (383)
Q Consensus 220 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~adi~v~ps~~e~~~~~~~Ea~a~G~PvI~~~ 291 (383)
....++|.|.-. .-.+++++++++.+|-. -...+=...|++|.-.. ..+.++-.|...|+|||.-+
T Consensus 24 ~G~~~v~TG~l~---~~~R~e~~~~i~~~Ggk-v~~sVSkkTd~LV~G~~--~g~sKl~KA~~lgI~IisE~ 89 (112)
T 2ebu_A 24 EGLIFVITGVLE---SIERDEAKSLIERYGGK-VTGNVSKKTNYLVMGRD--SGQSKSDKAAALGTKIIDED 89 (112)
T ss_dssp TTCEEEECSCCS---SSCHHHHHHHHHHTTCE-ECSSCCSSCCEEEECSS--CCSHHHHHHHHHTCEEEEHH
T ss_pred CCCEEEEeeeCC---CCCHHHHHHHHHHcCCE-EeccccCCeeEEEecCC--CChHHHHHHHHcCCeEEeHH
Confidence 356777777541 12467888888888763 11223356777776542 22378888999999988654
No 163
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=20.44 E-value=2.9e+02 Score=23.39 Aligned_cols=99 Identities=10% Similarity=-0.031 Sum_probs=54.3
Q ss_pred EEEEEeeccccccCHHHHHHHHHHHhccC--CCeEEEEEeCCC--CCC----------CchHHHHHHHHhhCCCC-----
Q 043412 191 FVFLSVFKWEYRKGWDVLLKAYLEEFSKA--DGVVLYLLTNPY--HSG----------RDFGNKIVNFVEDSDLE----- 251 (383)
Q Consensus 191 ~~i~~~g~~~~~K~~~~ll~a~~~l~~~~--~~~~l~i~G~~~--~~~----------~~~~~~~~~~~~~~~~~----- 251 (383)
++|.....+ .+.+.+++.++++++.. -.+..++-+.-. ++. .+-...+.+..++.|+.
T Consensus 19 ~vIaGPCsi---e~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~~tev 95 (288)
T 3tml_A 19 FLIAGTCVV---ESEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPVLTDV 95 (288)
T ss_dssp EEEEECSBC---CCHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEEEeCCcC---CCHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 344444444 35667777776665431 123444443211 011 12234566777788885
Q ss_pred ---CccccccccCceEEecCCC-CCCChHHHHHHHcCCCEEEcCCC
Q 043412 252 ---KPDDGWAPAADVFVLPSRG-EGWGRPLVEAMSMGLPVIATNWS 293 (383)
Q Consensus 252 ---~~v~~~~~~adi~v~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~ 293 (383)
+.+..+...+|++-.+|.. ..+++ +.|+...|+||+.++-.
T Consensus 96 ~d~~~v~~l~~~vd~lkIgA~~~~n~~L-Lr~~a~~gkPVilK~G~ 140 (288)
T 3tml_A 96 HSIDEIEQVASVVDVLQTPAFLCRQTDF-IHACARSGKPVNIKKGQ 140 (288)
T ss_dssp CSGGGHHHHHHHCSEEEECGGGTTCHHH-HHHHHTSSSCEEEECCT
T ss_pred CCHHHHHHHHHhCCEEEECcccccCHHH-HHHHHccCCcEEEeCCC
Confidence 2333444558999988852 23332 55667789999999863
No 164
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=20.43 E-value=1.9e+02 Score=26.07 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=43.1
Q ss_pred cCCCeEEEEEeCCCCCCCchHHHHHHHHhhCCCC-----C----ccccccc--cCceEEecCCCCCCChHHHHHHHcCCC
Q 043412 218 KADGVVLYLLTNPYHSGRDFGNKIVNFVEDSDLE-----K----PDDGWAP--AADVFVLPSRGEGWGRPLVEAMSMGLP 286 (383)
Q Consensus 218 ~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~-----~----~v~~~~~--~adi~v~ps~~e~~~~~~~Ea~a~G~P 286 (383)
+.++++++-+.+. +.+..+.+.+.+...++. . ++..+++ ..|+++..+-...-.-.+.+|+.+|++
T Consensus 41 ~~~~~~lvav~d~---~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~~al~aGkh 117 (444)
T 2ixa_A 41 RRDDVEIVAFADP---DPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGVAAMKAGKI 117 (444)
T ss_dssp TCTTEEEEEEECS---CHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHHHHHHTTCE
T ss_pred hCCCcEEEEEEeC---CHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCe
Confidence 3478888877654 112223333333234431 3 5667776 578888776544334467789999999
Q ss_pred EEEcC
Q 043412 287 VIATN 291 (383)
Q Consensus 287 vI~~~ 291 (383)
|++-.
T Consensus 118 V~~EK 122 (444)
T 2ixa_A 118 VGMEV 122 (444)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99864
No 165
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=20.42 E-value=1.3e+02 Score=21.31 Aligned_cols=69 Identities=16% Similarity=0.171 Sum_probs=39.0
Q ss_pred cCceEEecCC-C-CCCChHHHHHHHc-----CCCEEEcCCCCccccc----cCCCceeeecccccccccCCCCcccccCC
Q 043412 260 AADVFVLPSR-G-EGWGRPLVEAMSM-----GLPVIATNWSGPTEYL----TEENGYPLLVGRMSEVTEGPFKGHFWAEP 328 (383)
Q Consensus 260 ~adi~v~ps~-~-e~~~~~~~Ea~a~-----G~PvI~~~~~g~~e~v----~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 328 (383)
..|++++-.. . +.-|..+++.+.. .+|+|........+.. ..+ ..+++..+.
T Consensus 50 ~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g-----------------~~~~l~KP~ 112 (140)
T 3lua_A 50 SITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFK-----------------VSDYILKPY 112 (140)
T ss_dssp CCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSC-----------------CSEEEESSC
T ss_pred CCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcC-----------------CCEEEECCC
Confidence 4577776543 2 2335566666544 7887765443222222 223 223344444
Q ss_pred CHHHHHHHHHHHhcCHH
Q 043412 329 SVDKLRALMRLVVSNVD 345 (383)
Q Consensus 329 ~~~~la~~i~~ll~~~~ 345 (383)
+.+++.++|..++....
T Consensus 113 ~~~~l~~~i~~~~~~~~ 129 (140)
T 3lua_A 113 PTKRLENSVRSVLKICQ 129 (140)
T ss_dssp CTTHHHHHHHHHHCC--
T ss_pred CHHHHHHHHHHHHHhcc
Confidence 99999999999987544
No 166
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.37 E-value=82 Score=25.38 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=37.5
Q ss_pred ChhHHHHHHHHHHHhcccCCCceeeeecCCCcccc--hhhcCCChhh--hh-------HHHHHHhhhcCCCccEEEecC
Q 043412 9 GYSSESWSYILALNEHVKNPRFKLAIEHHGDLQSL--QFWEGLPHHM--RN-------LAVELYNTECRTNETVVICHS 76 (383)
Q Consensus 9 G~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~-------~~~~l~~~~~~~~pDiV~~~~ 76 (383)
|.++.+..+.++|.+.++...+...+....+..-. ..-.++|... .. .-..+.+.+++.+||+|++..
T Consensus 10 G~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~~Dliv~a~ 88 (216)
T 2ywr_A 10 GRGSNLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFPSKKEFEERMALELKKKGVELVVLAG 88 (216)
T ss_dssp SCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSSSHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCcccccchhhhhHHHHHHHHhcCCCEEEEeC
Confidence 33467788888888765422344455554333211 1122444221 11 124567778889999999974
No 167
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=20.36 E-value=2.9e+02 Score=20.97 Aligned_cols=66 Identities=9% Similarity=-0.004 Sum_probs=35.6
Q ss_pred cCceEEecCCCCCC-ChHHHHHHH---cCCCEEEcCCCCccccc----cCC-CceeeecccccccccCCCCcccccCCCH
Q 043412 260 AADVFVLPSRGEGW-GRPLVEAMS---MGLPVIATNWSGPTEYL----TEE-NGYPLLVGRMSEVTEGPFKGHFWAEPSV 330 (383)
Q Consensus 260 ~adi~v~ps~~e~~-~~~~~Ea~a---~G~PvI~~~~~g~~e~v----~~~-~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (383)
..|++++-..-.+. |. +.+.+. ..+|+|.-......+.. ..+ .+++..| .+.
T Consensus 52 ~~dlvl~D~~mp~~~g~-l~~~~~~~~~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP------------------~~~ 112 (196)
T 1qo0_D 52 PVDVVFTSIFQNRHHDE-IAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQP------------------LDA 112 (196)
T ss_dssp CCSEEEEECCSSTHHHH-HHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESS------------------CCG
T ss_pred CCCEEEEeCCCCccchH-HHHHHhccCCCCCEEEEEcCCChHHHHHHHHcCCCeeEecC------------------cCH
Confidence 46777654332221 34 555554 46787754332222222 223 4444444 488
Q ss_pred HHHHHHHHHHhcCH
Q 043412 331 DKLRALMRLVVSNV 344 (383)
Q Consensus 331 ~~la~~i~~ll~~~ 344 (383)
+++..++..++...
T Consensus 113 ~~L~~~l~~~~~~~ 126 (196)
T 1qo0_D 113 HRVLPVLVSARRIS 126 (196)
T ss_dssp GGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998877643
Done!