Query 043414
Match_columns 113
No_of_seqs 118 out of 808
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 07:52:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ljo_A Non-specific lipid-tran 100.0 4.3E-33 1.5E-37 180.1 -0.2 90 24-113 1-90 (93)
2 1bwo_A NS-LTP1, nonspecific li 100.0 9.1E-32 3.1E-36 172.9 0.1 89 25-113 1-89 (90)
3 1afh_A Maize nonspecific lipid 100.0 3.1E-31 1.1E-35 171.4 1.0 90 24-113 1-91 (93)
4 1siy_A LTP 1, NS-LTP1, nonspec 100.0 4.6E-31 1.6E-35 169.9 1.2 89 25-113 1-89 (91)
5 1t12_A LTP 1, nonspecific lipi 100.0 3.2E-31 1.1E-35 170.7 0.3 89 24-113 1-89 (91)
6 2alg_A Non-specific lipid tran 100.0 3.3E-31 1.1E-35 170.9 -0.3 90 24-113 1-90 (92)
7 2rkn_A DIR1 protein, AT5G48485 99.6 1.8E-17 6.1E-22 103.1 -0.3 70 24-104 2-76 (77)
8 1n89_A Lipid transfer protein; 99.6 2E-16 6.9E-21 96.1 -0.8 58 33-102 6-65 (67)
9 1l6h_A LTP2, non-specific lipi 99.5 3E-16 1E-20 95.8 -1.7 63 26-102 2-66 (69)
10 3ob4_A Conglutin, maltose ABC 89.5 0.016 5.4E-07 45.6 -3.6 51 49-107 429-492 (500)
11 1hyp_A Hydrophobic protein fro 89.1 0.12 4E-06 31.8 0.9 68 33-112 10-78 (80)
12 2lvf_A 2S albumin; allergen, c 38.0 18 0.00062 23.0 2.1 59 33-101 17-102 (114)
13 2ds2_B Sweet protein mabinlin- 35.1 19 0.00063 21.1 1.6 43 49-101 8-63 (72)
14 1ag7_A Conotoxin GS; neurotoxi 29.8 9 0.00031 18.9 -0.3 12 46-57 8-19 (34)
15 1pnb_B Napin BNIB; napin IA an 26.9 16 0.00055 21.5 0.4 45 48-102 11-67 (75)
16 1eyo_A Conotoxin TVIIA; cystin 24.8 14 0.00049 17.8 -0.1 12 46-57 8-19 (30)
17 4gyx_A Type III collagen fragm 23.3 16 0.00055 17.6 -0.1 9 47-55 23-31 (31)
18 1psy_A 2S albumin, RICC3; albu 22.4 44 0.0015 21.6 1.9 69 26-104 17-121 (125)
No 1
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.97 E-value=4.3e-33 Score=180.11 Aligned_cols=90 Identities=43% Similarity=0.875 Sum_probs=85.2
Q ss_pred CCCchhhhccccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhhhhhcCCCCCCC
Q 043414 24 AITCGQVDASLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASSLPQKCGVQMNI 103 (113)
Q Consensus 24 ~~~C~~~~~~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~Lp~~Cgv~~p~ 103 (113)
+++|+++...|.||++|++|++.|++.||+|+++|++.++|+.|||++|+|+|+....+++||.+||.+||++||+++||
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p~ 80 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPY 80 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCSS
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCCC
Confidence 47899999999999999999878999999999999999999999999999999877777789999999999999999999
Q ss_pred CCCCCCCCCC
Q 043414 104 PISKTTNCAK 113 (113)
Q Consensus 104 ~i~~~~dC~~ 113 (113)
|||+++||++
T Consensus 81 ~Is~~~dC~~ 90 (93)
T 2ljo_A 81 KISTTTNCNT 90 (93)
T ss_dssp CCSTTCCGGG
T ss_pred CCCCCCCCCC
Confidence 9999999985
No 2
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.96 E-value=9.1e-32 Score=172.93 Aligned_cols=89 Identities=40% Similarity=0.874 Sum_probs=83.3
Q ss_pred CCchhhhccccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhhhhhcCCCCCCCC
Q 043414 25 ITCGQVDASLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASSLPQKCGVQMNIP 104 (113)
Q Consensus 25 ~~C~~~~~~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~Lp~~Cgv~~p~~ 104 (113)
++|+++...|.||++|++|++.|+++||+++|+|++.++|+.|||..|+|+++.+.++++||.++|.+||++||+++|||
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~~ 80 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYT 80 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHTTCTTCCHHHHHTHHHHHTCCCSSC
T ss_pred CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcCccCchhccCCcCHHHHHHHHHHcCCCCCCC
Confidence 47999999999999999987678899999999999999999999999999988777776899999999999999999999
Q ss_pred CCCCCCCCC
Q 043414 105 ISKTTNCAK 113 (113)
Q Consensus 105 i~~~~dC~~ 113 (113)
||+++||++
T Consensus 81 is~~~dC~~ 89 (90)
T 1bwo_A 81 ISLNIDCSR 89 (90)
T ss_dssp CCTTCCGGG
T ss_pred CCCCCCCCC
Confidence 999999985
No 3
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.96 E-value=3.1e-31 Score=171.36 Aligned_cols=90 Identities=46% Similarity=0.909 Sum_probs=83.4
Q ss_pred CCCchhhhccccCCHHHHhCCC-CCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhhhhhcCCCCCC
Q 043414 24 AITCGQVDASLASCIPYLIAGG-NPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASSLPQKCGVQMN 102 (113)
Q Consensus 24 ~~~C~~~~~~L~~Cl~yl~~~~-~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~Lp~~Cgv~~p 102 (113)
+++|+++...|.||++|++|++ .|+++||+|+|++++.++|+.|||..|+|++....++++||.++|.+||++||+++|
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC~~~~~~~~~~in~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 1 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIP 80 (93)
T ss_dssp CCSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHCCCS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEeeccccccccCcCHHHHHHHHHHcCCCCC
Confidence 3689999999999999999876 577899999999999999999999999999877777778999999999999999999
Q ss_pred CCCCCCCCCCC
Q 043414 103 IPISKTTNCAK 113 (113)
Q Consensus 103 ~~i~~~~dC~~ 113 (113)
||||+++||++
T Consensus 81 ~~is~~~dC~~ 91 (93)
T 1afh_A 81 YTISTSTDCSR 91 (93)
T ss_dssp SCCSTTCCSSS
T ss_pred CCCCCCCCCcc
Confidence 99999999986
No 4
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.96 E-value=4.6e-31 Score=169.94 Aligned_cols=89 Identities=47% Similarity=0.864 Sum_probs=83.1
Q ss_pred CCchhhhccccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhhhhhcCCCCCCCC
Q 043414 25 ITCGQVDASLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASSLPQKCGVQMNIP 104 (113)
Q Consensus 25 ~~C~~~~~~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~Lp~~Cgv~~p~~ 104 (113)
++|+++...|.||++|++|++.|+++||+++|+|++.++|+.|||..|+|+++.+.++++||.++|.+||++||+++||+
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~k~~~~~~~~in~~~A~~LP~~Cgv~~p~~ 80 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYK 80 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHTCCCSSC
T ss_pred CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcccCCcccccCCcCHHHHHHHHHHcCCCCCCC
Confidence 47999999999999999987778899999999999999999999999999987767776799999999999999999999
Q ss_pred CCCCCCCCC
Q 043414 105 ISKTTNCAK 113 (113)
Q Consensus 105 i~~~~dC~~ 113 (113)
||+++||++
T Consensus 81 is~~~dC~~ 89 (91)
T 1siy_A 81 ISTSTNCNS 89 (91)
T ss_dssp SCTTSCSST
T ss_pred CCCCCCCcc
Confidence 999999986
No 5
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.96 E-value=3.2e-31 Score=170.72 Aligned_cols=89 Identities=44% Similarity=0.808 Sum_probs=82.4
Q ss_pred CCCchhhhccccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhhhhhcCCCCCCC
Q 043414 24 AITCGQVDASLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASSLPQKCGVQMNI 103 (113)
Q Consensus 24 ~~~C~~~~~~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~Lp~~Cgv~~p~ 103 (113)
+++|+++...|.||++|++|++.|+ +||+|+|+|++.++|+.||+..|+|+++...++++||.++|.+||++||+++||
T Consensus 1 a~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClClk~~~~~~~~in~~~A~~LP~~C~v~~p~ 79 (91)
T 1t12_A 1 AITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVNIPY 79 (91)
T ss_dssp CCCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTTCCCSS
T ss_pred CCChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCCccccccccCCcChhHHHHHHHHcCCCCCC
Confidence 3689999999999999999865576 999999999999999999999999998776777689999999999999999999
Q ss_pred CCCCCCCCCC
Q 043414 104 PISKTTNCAK 113 (113)
Q Consensus 104 ~i~~~~dC~~ 113 (113)
|||+++||++
T Consensus 80 ~is~~~dC~~ 89 (91)
T 1t12_A 80 KISPSTDCSK 89 (91)
T ss_dssp CSSSSSCCTT
T ss_pred CCCCCCCCcc
Confidence 9999999986
No 6
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.96 E-value=3.3e-31 Score=170.88 Aligned_cols=90 Identities=47% Similarity=0.949 Sum_probs=83.7
Q ss_pred CCCchhhhccccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhhhhhcCCCCCCC
Q 043414 24 AITCGQVDASLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASSLPQKCGVQMNI 103 (113)
Q Consensus 24 ~~~C~~~~~~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~Lp~~Cgv~~p~ 103 (113)
+++|+++...|.||++|++|++.|+++||+++|+|++.++|++||+..|+|++.....+++||.++|.+||++||+++||
T Consensus 1 ~~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~~in~~~A~~LP~~Cgv~~p~ 80 (92)
T 2alg_A 1 MITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPY 80 (92)
T ss_dssp CCCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTTCCCSS
T ss_pred CCChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccCccChHHHHHHHHHcCCCCCC
Confidence 36899999999999999998878889999999999999999999999999998766677689999999999999999999
Q ss_pred CCCCCCCCCC
Q 043414 104 PISKTTNCAK 113 (113)
Q Consensus 104 ~i~~~~dC~~ 113 (113)
+||+++||++
T Consensus 81 ~is~~~dC~~ 90 (92)
T 2alg_A 81 KISASTNCAT 90 (92)
T ss_dssp CSSTTSCGGG
T ss_pred CCCCCCCCcc
Confidence 9999999985
No 7
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.63 E-value=1.8e-17 Score=103.15 Aligned_cols=70 Identities=26% Similarity=0.602 Sum_probs=58.1
Q ss_pred CCCchhhhccccCCHHHHhCC--CCCchhhhhhhhhhhccCCcccCCcccceeeccc---cccCCCCCHHHHhhhhhcCC
Q 043414 24 AITCGQVDASLASCIPYLIAG--GNPDAACCDGVKNLKSITPATADGRAACECVKAA---AARYPNIKEDAASSLPQKCG 98 (113)
Q Consensus 24 ~~~C~~~~~~L~~Cl~yl~~~--~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~---~~~~~~in~~~a~~Lp~~Cg 98 (113)
..+|+++...|.||++|++++ ..||++||+++|+. | ..|+|.+.. ..++ +||.++|.+||++||
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~--------~--~~ClC~~~~~~~~~~~-gin~~~A~~LP~~Cg 70 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--------D--FACLCGYKNSPWLGSF-GVDPELASALPKQCG 70 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTC--------C--HHHHHTTTTCHHHHHH-TBCHHHHHHHHHHTT
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhc--------C--cCCcCcccCCcchhhc-CcCHHHHHHHHHHcC
Confidence 467999998999999999974 47889999999971 2 378887654 4556 699999999999999
Q ss_pred CCCCCC
Q 043414 99 VQMNIP 104 (113)
Q Consensus 99 v~~p~~ 104 (113)
+++||.
T Consensus 71 v~~p~~ 76 (77)
T 2rkn_A 71 LANAPT 76 (77)
T ss_dssp CSCCCC
T ss_pred CCCCCC
Confidence 999864
No 8
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.55 E-value=2e-16 Score=96.10 Aligned_cols=58 Identities=24% Similarity=0.626 Sum_probs=48.5
Q ss_pred cccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCccccee--eccccccCCCCCHHHHhhhhhcCCCCCC
Q 043414 33 SLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACEC--VKAAAARYPNIKEDAASSLPQKCGVQMN 102 (113)
Q Consensus 33 ~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~~~~~~in~~~a~~Lp~~Cgv~~p 102 (113)
.|.||++|+++++.||++||++||+ +..|+| +++..... +||.++|.+||++||+++|
T Consensus 6 ~L~pC~~~v~~~~~Ps~~CC~~lk~-----------~~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 65 (67)
T 1n89_A 6 QLAVCASAILSGAKPSGECCGNLRA-----------QQGCFCQYAKDPTYGQ-YIRSPHARDTLTSCGLAVP 65 (67)
T ss_dssp TTHHHHHHHTTCCCCCHHHHHHHHH-----------HSSHHHHGGGCSTTHH-HHTCHHHHHHHHHHTSCCS
T ss_pred hcccCHHHHcCCCCCCHHHHHhhCC-----------CCCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 6899999999888899999999997 247888 66543322 6999999999999999876
No 9
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.53 E-value=3e-16 Score=95.84 Aligned_cols=63 Identities=24% Similarity=0.574 Sum_probs=51.1
Q ss_pred CchhhhccccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCccccee--eccccccCCCCCHHHHhhhhhcCCCCCC
Q 043414 26 TCGQVDASLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACEC--VKAAAARYPNIKEDAASSLPQKCGVQMN 102 (113)
Q Consensus 26 ~C~~~~~~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~~~~~~in~~~a~~Lp~~Cgv~~p 102 (113)
+|+.. .|.||++|+++++.||++||++||+. ..|+| +++..... +||.++|.+||++||+++|
T Consensus 2 ~C~~~--~L~pC~~~v~~~~~Ps~~CC~~lk~~-----------~~ClC~~~k~~~~~~-~in~~~A~~Lp~~Cgv~~P 66 (69)
T 1l6h_A 2 GCNAG--QLTVCTGAIAGGARPTAACCSSLRAQ-----------QGCFCQFAKDPRYGR-YVNSPNARKAVSSCGIALP 66 (69)
T ss_dssp CSTTT--THHHHHHHHTTCCSTTHHHHHHHHHH-----------HHHHHHHTTCSSHHH-HTTTTTGGGCCCCCSSCSC
T ss_pred CCChh--hcccCHHHHcCCCCCCHHHHHhhCCC-----------CCCCCccccCccccc-ccCHHHHHHHHHHcCCCCC
Confidence 46554 68999999998878999999999972 46888 66543322 6999999999999999876
No 10
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=89.54 E-value=0.016 Score=45.57 Aligned_cols=51 Identities=18% Similarity=0.564 Sum_probs=30.8
Q ss_pred hhhhhhhhhhhccCCcccCCccccee--ecccccc-----CCC---CC-HHHHhhhhhcCCCCCC--CCCCC
Q 043414 49 AACCDGVKNLKSITPATADGRAACEC--VKAAAAR-----YPN---IK-EDAASSLPQKCGVQMN--IPISK 107 (113)
Q Consensus 49 ~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~~~-----~~~---in-~~~a~~Lp~~Cgv~~p--~~i~~ 107 (113)
.+||..|+.+.. +.-|+| ++..... .+. -. ..+|..||..||+..| .+|++
T Consensus 429 ~~cc~~l~~~~~--------~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c~~~~ 492 (500)
T 3ob4_A 429 ERCCNELNEFEN--------NQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRCDLDV 492 (500)
T ss_dssp HHHHHHHGGGTT--------CHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCCCCC-
T ss_pred HHHHHHHHhCCc--------ccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccCCccC
Confidence 579999998641 246777 4332211 000 01 2459999999999977 55555
No 11
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=89.10 E-value=0.12 Score=31.78 Aligned_cols=68 Identities=19% Similarity=0.433 Sum_probs=44.0
Q ss_pred cccCCHHHHhCCCCCchhhhhhhhhhhccCCcccCCcccceeeccccccCCCCCHHHHhh-hhhcCCCCCCCCCCCCCCC
Q 043414 33 SLASCIPYLIAGGNPDAACCDGVKNLKSITPATADGRAACECVKAAAARYPNIKEDAASS-LPQKCGVQMNIPISKTTNC 111 (113)
Q Consensus 33 ~L~~Cl~yl~~~~~Ps~~CC~~v~~l~~~~~t~~~~~~~C~Clk~~~~~~~~in~~~a~~-Lp~~Cgv~~p~~i~~~~dC 111 (113)
+|.-|.+-+.|.-.|...||+-++.|.+. --++|+|-.-.+..+ +|.+...+ |-..||...| +.|.|
T Consensus 10 kLgvCanvL~g~~~~~~~CC~Ll~GL~dl------eAAvCLCtaik~Lgi--lnlpv~L~llln~Cgk~~P----~gF~C 77 (80)
T 1hyp_A 10 DLSICLNILGGSLGTVDDCCALIGGLGDI------EAIVCLCIQLRALGI--LNLNRNLQLILNSCGRSYP----SNATC 77 (80)
T ss_dssp CCGGGGGGGGTCCTTHHHHHHHHHTSCHH------HHHHHHHHHHHHHTC--SCHHHHHHHHHHHTTCSSC----CCCCC
T ss_pred chhHHHHHhCcCCCCCCccchhhhCcchh------hhhhhhhhhccccce--eecChhHHHHHHHhCCcCc----CCCCC
Confidence 57788887754323557899999998653 135899942112122 46665544 6678999988 66666
Q ss_pred C
Q 043414 112 A 112 (113)
Q Consensus 112 ~ 112 (113)
.
T Consensus 78 ~ 78 (80)
T 1hyp_A 78 P 78 (80)
T ss_dssp S
T ss_pred C
Confidence 4
No 12
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=37.97 E-value=18 Score=23.05 Aligned_cols=59 Identities=19% Similarity=0.593 Sum_probs=36.9
Q ss_pred cccCCHHHHhC----CC---CCc-------hhhhhhhhhhhccCCcccCCccccee--eccccc----cCCCCC------
Q 043414 33 SLASCIPYLIA----GG---NPD-------AACCDGVKNLKSITPATADGRAACEC--VKAAAA----RYPNIK------ 86 (113)
Q Consensus 33 ~L~~Cl~yl~~----~~---~Ps-------~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~~----~~~~in------ 86 (113)
.|..|..||.- +. .+. ..||+-|+.+.. .|+| |+..+. .+..+-
T Consensus 17 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~----------~CrC~aL~~~v~~~~qq~~~~~~~~~~~ 86 (114)
T 2lvf_A 17 MLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDE----------SCRCEGLRMMMRMMQQKEMQPRGEQMRR 86 (114)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCH----------HHHHHHHHHHHHHHHHHHCCCCSHHHHH
T ss_pred hHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCc----------CccCHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 58899999862 21 111 259999999764 5777 443221 111111
Q ss_pred -HHHHhhhhhcCCCCC
Q 043414 87 -EDAASSLPQKCGVQM 101 (113)
Q Consensus 87 -~~~a~~Lp~~Cgv~~ 101 (113)
...|..||..||+..
T Consensus 87 ~~q~A~~LP~~C~i~p 102 (114)
T 2lvf_A 87 MMRLAENIPSRCNLSP 102 (114)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHhChHhcCCCc
Confidence 246899999999973
No 13
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=35.14 E-value=19 Score=21.14 Aligned_cols=43 Identities=28% Similarity=0.622 Sum_probs=27.5
Q ss_pred hhhhhhhhhhhccCCcccCCccccee--eccccc------c-CC----CCCHHHHhhhhhcCCCCC
Q 043414 49 AACCDGVKNLKSITPATADGRAACEC--VKAAAA------R-YP----NIKEDAASSLPQKCGVQM 101 (113)
Q Consensus 49 ~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~~------~-~~----~in~~~a~~Lp~~Cgv~~ 101 (113)
..||+-++.+.. -|.| ++.... . +. .=...+|..||..||+..
T Consensus 8 qqCC~eL~~~~~----------~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~ 63 (72)
T 2ds2_B 8 RQCCNQLRQVDR----------PCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN 63 (72)
T ss_dssp HHHHHHHTTSCG----------GGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhcCc----------cccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCC
Confidence 479999998653 5777 443321 1 11 112457899999999974
No 14
>1ag7_A Conotoxin GS; neurotoxin, MU-conotoxin, sodium channel blocker, cystine knot motif; HET: HYP CGU; NMR {Conus geographus} SCOP: g.3.6.1
Probab=29.82 E-value=9 Score=18.91 Aligned_cols=12 Identities=25% Similarity=0.719 Sum_probs=9.1
Q ss_pred CCchhhhhhhhh
Q 043414 46 NPDAACCDGVKN 57 (113)
Q Consensus 46 ~Ps~~CC~~v~~ 57 (113)
.=|++||.|+|-
T Consensus 8 rcppqccmglrc 19 (34)
T 1ag7_A 8 RCPPQCCMGLRC 19 (34)
T ss_dssp CSSSCBCTTEEE
T ss_pred CCChhhceeeec
Confidence 345689999875
No 15
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=26.88 E-value=16 Score=21.49 Aligned_cols=45 Identities=24% Similarity=0.533 Sum_probs=28.5
Q ss_pred chhhhhhhhhhhccCCcccCCccccee--ecccc------ccCCCC----CHHHHhhhhhcCCCCCC
Q 043414 48 DAACCDGVKNLKSITPATADGRAACEC--VKAAA------ARYPNI----KEDAASSLPQKCGVQMN 102 (113)
Q Consensus 48 s~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~------~~~~~i----n~~~a~~Lp~~Cgv~~p 102 (113)
-..||+-++.+.. -|+| ++... ..+++= ...+|..||..||+..+
T Consensus 11 ~qqCC~qL~~~~~----------~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~ 67 (75)
T 1pnb_B 11 REQCCNELYQEDQ----------VCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQI 67 (75)
T ss_dssp THHHHHHHHTSCG----------GGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTT
T ss_pred HHHHHHHHHhCCc----------ccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCC
Confidence 3689999998753 5777 44321 112211 23467889999999754
No 16
>1eyo_A Conotoxin TVIIA; cystine knot motif; HET: HYP; NMR {Synthetic} SCOP: g.3.6.1
Probab=24.78 E-value=14 Score=17.81 Aligned_cols=12 Identities=25% Similarity=0.614 Sum_probs=8.7
Q ss_pred CCchhhhhhhhh
Q 043414 46 NPDAACCDGVKN 57 (113)
Q Consensus 46 ~Ps~~CC~~v~~ 57 (113)
.=|+.||.|++-
T Consensus 8 rcpp~ccmgl~c 19 (30)
T 1eyo_A 8 RCPPVCCMGLMC 19 (30)
T ss_dssp SCSSSBCTTBCC
T ss_pred CCCchheeeeee
Confidence 345689999875
No 17
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=23.27 E-value=16 Score=17.62 Aligned_cols=9 Identities=56% Similarity=1.508 Sum_probs=4.5
Q ss_pred Cchhhhhhh
Q 043414 47 PDAACCDGV 55 (113)
Q Consensus 47 Ps~~CC~~v 55 (113)
|+..||.++
T Consensus 23 ppgpccggv 31 (31)
T 4gyx_A 23 PPGPCCGGV 31 (31)
T ss_dssp CCCCCC---
T ss_pred CCCCCccCC
Confidence 556899875
No 18
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=22.43 E-value=44 Score=21.57 Aligned_cols=69 Identities=29% Similarity=0.610 Sum_probs=41.9
Q ss_pred Cchhhh--ccccCCHHHHhCC---C--------CC-------c----hhhhhhhhhhhccCCcccCCccccee--ecccc
Q 043414 26 TCGQVD--ASLASCIPYLIAG---G--------NP-------D----AACCDGVKNLKSITPATADGRAACEC--VKAAA 79 (113)
Q Consensus 26 ~C~~~~--~~L~~Cl~yl~~~---~--------~P-------s----~~CC~~v~~l~~~~~t~~~~~~~C~C--lk~~~ 79 (113)
.|-.-. ..|.+|-.|+.-. . .| - ..||.-|+.+.. -|.| |+..+
T Consensus 17 ~C~~e~qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~----------~C~C~aL~~~v 86 (125)
T 1psy_A 17 QCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRD----------ECQCEAIKYIA 86 (125)
T ss_dssp SHHHHHTTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCS----------SHHHHHHHHHH
T ss_pred ccHHHHHHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCc----------ccccHHHHHHH
Confidence 476433 3699999999741 1 12 1 479999998643 5777 54333
Q ss_pred c------cCCC--C--CHHHHhhhhhcCCCCCCCC
Q 043414 80 A------RYPN--I--KEDAASSLPQKCGVQMNIP 104 (113)
Q Consensus 80 ~------~~~~--i--n~~~a~~Lp~~Cgv~~p~~ 104 (113)
. .+.+ + -..+|..||..||+.-+|+
T Consensus 87 ~~~~qQgq~~gqq~~~~~q~A~~LP~~C~i~C~~~ 121 (125)
T 1psy_A 87 EDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQ 121 (125)
T ss_dssp HHHHHHTTCCTTCSHHHHHHHHHHHHHHTCSTTTS
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhhHHHcCCcCCCC
Confidence 1 1111 1 1346889999999943443
Done!