Query 043420
Match_columns 702
No_of_seqs 396 out of 2753
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 07:58:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043420.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043420hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 7E-123 2E-127 1063.9 51.6 607 73-697 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 4E-118 1E-122 1027.9 54.0 616 73-696 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.8E-83 6.3E-88 768.0 47.7 530 78-698 2-607 (926)
4 3afg_A Subtilisin-like serine 100.0 1.8E-60 6.2E-65 537.9 32.9 337 29-552 60-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.3E-56 4.3E-61 490.6 23.2 318 28-551 23-392 (395)
6 3t41_A Epidermin leader peptid 100.0 3E-55 1E-59 491.6 28.1 333 27-552 64-466 (471)
7 1y9z_A Alkaline serine proteas 100.0 4.9E-54 1.7E-58 476.8 25.9 376 79-572 10-437 (441)
8 1r6v_A Subtilisin-like serine 100.0 1.5E-52 5.2E-57 478.7 27.3 344 29-562 53-450 (671)
9 1r0r_E Subtilisin carlsberg; h 100.0 2.8E-52 9.7E-57 433.7 24.3 260 79-550 10-274 (274)
10 4h6x_A Thiazoline oxidase/subt 100.0 2.3E-54 8E-59 466.1 8.8 306 79-551 17-338 (357)
11 1dbi_A AK.1 serine protease; h 100.0 5.9E-52 2E-56 432.5 26.3 263 78-550 16-279 (280)
12 1gci_A Subtilisin; hydrolase, 100.0 4.5E-52 1.5E-56 430.7 25.0 259 79-550 10-269 (269)
13 1to2_E Subtilisin BPN'; serine 100.0 7.8E-52 2.7E-56 431.8 25.0 262 79-551 10-276 (281)
14 2p4e_P Proprotein convertase s 100.0 5.4E-54 1.8E-58 487.4 5.7 317 11-526 91-422 (692)
15 1thm_A Thermitase; hydrolase(s 100.0 4E-51 1.4E-55 426.2 25.9 261 79-550 17-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 3.4E-51 1.1E-55 436.0 21.8 269 78-551 26-311 (327)
17 4h6w_A N-terminal cyanobactin 100.0 2.4E-51 8.4E-56 434.4 16.9 277 78-551 6-288 (306)
18 3zxy_A Subtilisin-like protein 100.0 3.9E-51 1.3E-55 427.6 16.9 265 89-550 3-274 (282)
19 2ixt_A 36KDA protease; serine 100.0 6.7E-50 2.3E-54 424.0 26.3 280 79-545 12-309 (310)
20 2z30_A TK-subtilisin; thermoco 100.0 2.8E-50 9.4E-55 428.3 20.1 268 79-551 14-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 1.8E-50 6.2E-55 435.0 17.6 274 79-551 29-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 4.4E-50 1.5E-54 431.0 19.5 299 80-552 19-338 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 2.9E-49 9.8E-54 438.1 23.3 297 77-553 5-320 (434)
24 3lxu_X Tripeptidyl-peptidase 2 100.0 2.5E-48 8.6E-53 461.2 26.6 408 94-697 214-653 (1354)
25 1sh7_A Extracellular subtilisi 100.0 8.6E-48 2.9E-52 401.5 26.0 240 80-529 16-259 (284)
26 2b6n_A Proteinase K; S binding 100.0 1.9E-47 6.5E-52 398.2 24.7 242 80-529 18-263 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 2.1E-47 7E-52 398.0 24.0 241 80-530 18-262 (276)
28 2oxa_A Extracellular serine pr 100.0 1E-47 3.5E-52 441.7 21.3 291 80-556 57-430 (600)
29 2pwa_A Proteinase K; structure 100.0 6.8E-47 2.3E-51 393.7 20.3 240 85-546 24-272 (279)
30 1p8j_A Furin precursor; prohor 100.0 4.4E-47 1.5E-51 424.2 18.3 288 79-553 24-332 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 8.9E-46 3E-50 416.4 21.7 280 79-553 40-344 (503)
32 3f7m_A Alkaline serine proteas 100.0 8.9E-46 3.1E-50 386.2 19.3 231 84-529 24-263 (279)
33 2qtw_B Proprotein convertase s 100.0 3.9E-45 1.3E-49 404.8 21.3 244 85-525 18-269 (546)
34 3hjr_A Extracellular serine pr 100.0 1.9E-43 6.6E-48 407.5 27.1 288 80-552 57-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 9.7E-25 3.3E-29 246.0 6.2 98 191-292 274-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 1.6E-21 5.5E-26 209.5 9.6 101 192-292 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 98.9 1.6E-09 5.6E-14 121.2 10.4 99 193-292 263-375 (544)
38 2w2n_P Proprotein convertase s 98.4 2.2E-07 7.6E-12 82.0 5.6 62 10-71 52-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.1 3.8E-06 1.3E-10 69.2 6.4 47 28-75 33-79 (80)
40 2qtw_A Proprotein convertase s 97.9 7.9E-06 2.7E-10 73.0 5.0 61 11-71 63-123 (124)
41 3icu_A E3 ubiquitin-protein li 97.8 7.7E-05 2.6E-09 71.6 10.1 82 341-422 82-183 (194)
42 1v5i_B POIA1, IA-1=serine prot 97.3 0.00054 1.9E-08 55.5 7.1 43 29-71 30-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.4 0.0027 9.2E-08 49.6 4.3 44 26-70 20-63 (65)
44 2ys4_A Hydrocephalus-inducing 94.5 0.093 3.2E-06 46.3 7.7 73 612-692 41-114 (122)
45 3iib_A Peptidase M28; YP_92679 92.8 0.24 8.3E-06 54.0 8.8 71 352-422 124-223 (444)
46 2ek8_A Aminopeptidase; metallo 92.8 0.19 6.4E-06 54.4 7.9 62 352-413 110-182 (421)
47 3qbt_B Inositol polyphosphate 92.6 0.94 3.2E-05 40.8 11.0 84 613-697 44-138 (140)
48 3lxu_X Tripeptidyl-peptidase 2 92.5 0.089 3E-06 63.9 5.0 48 89-154 32-80 (1354)
49 2r39_A FIXG-related protein; s 87.6 2.3 7.8E-05 36.9 8.7 55 613-669 32-86 (118)
50 2e6j_A Hydin protein; PAPD, st 86.8 2.7 9.2E-05 35.8 8.7 82 612-697 26-110 (112)
51 3kas_A Transferrin receptor pr 84.7 0.99 3.4E-05 51.3 6.0 61 353-413 128-230 (640)
52 3fed_A Glutamate carboxypeptid 84.0 1.1 3.6E-05 51.6 6.0 63 352-414 150-268 (707)
53 1y9z_A Alkaline serine proteas 78.1 1.3 4.4E-05 48.1 3.7 30 433-470 183-212 (441)
54 3qis_A Inositol polyphosphate 74.0 21 0.00073 37.3 11.7 84 613-697 47-141 (366)
55 2qsv_A Uncharacterized protein 73.1 13 0.00045 35.9 9.2 80 613-696 20-105 (220)
56 2kq1_A BH0266 protein; solutio 66.9 1.4 4.7E-05 38.5 0.4 55 614-668 55-111 (119)
57 3idu_A Uncharacterized protein 66.4 31 0.0011 30.1 9.2 50 612-665 33-83 (127)
58 1w8o_A Bacterial sialidase; 3D 53.6 56 0.0019 36.3 11.0 78 599-683 364-442 (601)
59 1z9l_A Vesicle-associated memb 47.8 68 0.0023 27.8 8.3 53 612-667 27-79 (128)
60 1wgl_A TOLL-interacting protei 45.6 14 0.00048 27.7 2.8 35 490-524 3-37 (59)
61 1wic_A Hypothetical protein ri 44.5 72 0.0025 28.7 8.1 52 613-667 36-87 (152)
62 1row_A SSP-19, MSP-domain prot 43.2 1.1E+02 0.0036 25.9 8.4 50 615-667 18-67 (109)
63 1m1s_A WR4; structural genomic 42.7 93 0.0032 26.6 8.0 51 615-668 26-76 (116)
64 1msp_A MSP, major sperm protei 42.2 67 0.0023 27.8 7.2 51 613-666 26-76 (126)
65 2qsv_A Uncharacterized protein 37.5 1.6E+02 0.0054 28.0 9.9 89 600-694 124-218 (220)
66 3lyw_A YBBR family protein; st 36.7 27 0.00093 28.6 3.4 39 613-651 42-81 (90)
67 3abz_A Beta-glucosidase I; gly 36.1 86 0.0029 36.6 8.9 157 483-665 619-795 (845)
68 3zyz_A Beta-D-glucoside glucoh 35.2 80 0.0027 36.1 8.4 55 612-668 613-675 (713)
69 2x41_A Beta-glucosidase; hydro 33.9 23 0.0008 40.7 3.6 70 596-668 597-678 (721)
70 2cri_A Vesicle-associated memb 33.7 1E+02 0.0035 27.4 7.3 52 613-667 32-83 (147)
71 1ni7_A ER75, hypothetical prot 30.7 36 0.0012 30.9 3.6 33 484-517 77-109 (155)
72 3sd2_A Putative member of DUF3 29.3 2.3E+02 0.0077 23.6 7.8 66 601-681 35-100 (101)
73 2l0d_A Cell surface protein; s 26.8 2E+02 0.007 24.4 7.5 25 612-636 19-44 (114)
74 3g0m_A Cysteine desulfuration 26.2 35 0.0012 30.4 2.6 34 483-517 69-102 (141)
75 3e9t_A Na/Ca exchange protein; 25.4 2.8E+02 0.0096 23.2 8.3 78 599-683 9-92 (114)
76 3isy_A Bsupi, intracellular pr 24.9 2.2E+02 0.0074 24.5 7.3 53 612-665 18-87 (120)
77 4ep8_B Urease subunit beta; al 23.7 1.2E+02 0.0041 25.1 5.0 49 612-662 18-81 (101)
78 1otr_A Protein CUE2; protein-p 21.7 83 0.0028 22.5 3.3 25 499-523 7-31 (49)
79 4ac7_B Urease subunit beta; hy 20.4 1.4E+02 0.0048 25.8 5.0 49 612-662 24-87 (126)
80 4ubp_B Protein (urease (chain 20.4 1.4E+02 0.0048 25.8 5.0 49 612-662 24-87 (126)
81 3q48_A Chaperone CUPB2; IG fol 20.3 5.5E+02 0.019 24.9 10.4 83 613-697 43-147 (257)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6.8e-123 Score=1063.91 Aligned_cols=607 Identities=39% Similarity=0.620 Sum_probs=543.3
Q ss_pred cCCCccccCchh---hcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCc---ccCceeEeeeecc
Q 043420 73 TTRSWDFMGFSE---HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNF---TCNNKIIGAKFYR 146 (702)
Q Consensus 73 ~~~s~~~~g~~~---~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~---~~n~kiig~~~~~ 146 (702)
|+++|+|+|++. +|..+++|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.+.+| .||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 578999999975 9999999999999999999999999999999999999999999999888 6999999999997
Q ss_pred cCCC----C-CCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHH
Q 043420 147 SDKK----F-SPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFD 221 (702)
Q Consensus 147 ~~~~----~-~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~ 221 (702)
++. . ...+..+++|..||||||||||||+.+++.+++|++.|.+.||||+|+|++||+|+..++..+++++||+
T Consensus 81 -~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~ 159 (649)
T 3i6s_A 81 -KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMD 159 (649)
T ss_dssp -HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHH
T ss_pred -CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHH
Confidence 321 1 1223567889999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHCCCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEe
Q 043420 222 DAIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKL 301 (702)
Q Consensus 222 ~A~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~ 301 (702)
||+++|+||||||||.. ...+..+++.+++++|+++|++||+||||+|+...++++.+||+|+|||++.||.|..++.+
T Consensus 160 ~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 160 QAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp HHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred HHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence 99999999999999987 46677899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCc--CCeEEEEee-----cchhhhhhhc
Q 043420 302 GNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLV--QGKIVLCDE-----LNDGFGAATA 374 (702)
Q Consensus 302 ~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~-----~~~~~~~~~a 374 (702)
++++.+.|.+++........+|+++.. ....|.+..++..++ +|||++|+| .+|..+++.+
T Consensus 239 gng~~~~g~sl~~~~~~~~~~plv~~~------------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~ 306 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAFVRDSPVIYNK------------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRAR 306 (649)
T ss_dssp TTSCEEEEECCCSSCBCEEEEEEECCT------------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHT
T ss_pred CCCcEEeeeecccCcccCcceeeEecc------------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhc
Confidence 999999999998877667889999865 346899988888877 999999997 5688999999
Q ss_pred CceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEE-eccccccccCCCcccccCCCCCCCCCCCCCC
Q 043420 375 RAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATI-LKSTAEKNEFAPVVASFSSRGPNPITNDILK 453 (702)
Q Consensus 375 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i-~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lK 453 (702)
|+.|+|++|+......+.+.+|.++|+..+++.|+.|++++.+++++| +..+..+..+.+.++.||||||+...+++||
T Consensus 307 Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilK 386 (649)
T 3i6s_A 307 LKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISK 386 (649)
T ss_dssp CSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCS
T ss_pred CceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccC
Confidence 999999999884444577899999999999999999999999999999 7778888888999999999999987789999
Q ss_pred CcEEeCCCcEEeeccCCCCCCC--CCC-CCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCC
Q 043420 454 PDLTAPGVDILASWTQASSPSE--GDP-RISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEA 530 (702)
Q Consensus 454 PDI~APG~~I~sa~~~~~~~~~--~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~ 530 (702)
|||+|||++|+++|+....+.. .+. +...|..+||||||||||||+||||||+||+|+|++||++||+||+++...+
T Consensus 387 PDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g 466 (649)
T 3i6s_A 387 PDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTR 466 (649)
T ss_dssp CCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTS
T ss_pred CeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCC
Confidence 9999999999999987543222 111 3368999999999999999999999999999999999999999999876543
Q ss_pred C--------CC-CCccCCCCCcCccCcCCCceeeeCCchhhHhhhhcCCCCCCcceeecCCCcc--ccCCCCCCccCCCC
Q 043420 531 N--------SD-AEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRS--CSNSTNATVWDLNY 599 (702)
Q Consensus 531 ~--------~~-~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~ln~ 599 (702)
. .. .++.||+|+||+.+|++||||||.+.+||++|||++||+.++|+.|+++++. |+. ...+|||
T Consensus 467 ~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNy 542 (649)
T 3i6s_A 467 KPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNY 542 (649)
T ss_dssp SBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCC
T ss_pred CcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCC
Confidence 2 12 5789999999999999999999999999999999999999999999998888 975 3679999
Q ss_pred CeEEEec-CCCCCcc--EEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEE
Q 043420 600 PSFALST-KPGNNTT--QVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMIS 676 (702)
Q Consensus 600 ps~~~~~-~~~~~~~--~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~ 676 (702)
|||++.+ +...... +||+|||||||+..+||+++++.|+|++|+|+|++|+|++.+|+++|+|||+......+.|.|
T Consensus 543 Ps~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~f 622 (649)
T 3i6s_A 543 PSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNV 622 (649)
T ss_dssp SSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCE
T ss_pred CcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEE
Confidence 9999987 4411112 899999999999999999999999999999999999999899999999999986555567899
Q ss_pred EEEEEEC--CCceEEeEEEEEec
Q 043420 677 ASLVWDD--GVHHVRSPVVAFVA 697 (702)
Q Consensus 677 G~~~~~~--~~~~v~~P~~~~~~ 697 (702)
|+|+|+| ++|.||+||+|++.
T Consensus 623 g~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 623 GSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEcCCCCeEEEEeEEEEEc
Confidence 9999998 99999999999986
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.6e-118 Score=1027.85 Aligned_cols=616 Identities=57% Similarity=0.962 Sum_probs=524.6
Q ss_pred cCCCccccCchh-hcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCC
Q 043420 73 TTRSWDFMGFSE-HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKF 151 (702)
Q Consensus 73 ~~~s~~~~g~~~-~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~ 151 (702)
|+++|+|+|++. +|.++.+|+||+|||||||||++||+|.|+++++++.+|+|.|+.+.+|.||+|++++++|......
T Consensus 1 tt~s~~flGl~~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~ 80 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPI 80 (621)
T ss_dssp CCSHHHHTTCCTTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSC
T ss_pred CCCChhHcCCCccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCcc
Confidence 589999999986 8888999999999999999999999999999999999999999999999999999999999833333
Q ss_pred CCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHHCCCCEE
Q 043420 152 SPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDII 231 (702)
Q Consensus 152 ~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~gvdVI 231 (702)
...+..+++|.+||||||||||||+.+.+.+.+|++.+.++||||+|+|++||+|++.+|..+++++||++|+++|+|||
T Consensus 81 ~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~dVi 160 (621)
T 3vta_A 81 SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDII 160 (621)
T ss_dssp CTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 44456788999999999999999999888888899999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEe
Q 043420 232 SISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGIS 311 (702)
Q Consensus 232 n~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~ 311 (702)
|||||+..+..+..+++++++++|+++||+||+||||+|+...++++.+||+++|++++.++.|...+.++++..+.+.+
T Consensus 161 n~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s 240 (621)
T 3vta_A 161 SLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240 (621)
T ss_dssp EECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBC
T ss_pred EecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeee
Confidence 99999986667788999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred ecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEee--cchhhhhhhcCceEEEEeeCCCCCC
Q 043420 312 INTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDE--LNDGFGAATARAVGSVMQGNDDRDV 389 (702)
Q Consensus 312 ~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~--~~~~~~~~~aGa~g~i~~~~~~~~~ 389 (702)
+.... ...++++...+..... ........|.+..++..+++|||++|++ ..+......+|+.+++++++... .
T Consensus 241 ~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~-~ 315 (621)
T 3vta_A 241 INTFD--NQYYPLVSGRDIPNTG--FDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRD-Y 315 (621)
T ss_dssp CCCSC--CEEECEEETTTSCCTT--CCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCS-S
T ss_pred cccCC--Cccccccccccccccc--ccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCC-c
Confidence 76543 5677787776544221 2233456799999999999999999987 45667788899999999887653 3
Q ss_pred CcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccC
Q 043420 390 AYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQ 469 (702)
Q Consensus 390 ~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~ 469 (702)
.+.+.+|...++..++..++.|+..+..+++.++..........+.++.||||||+...++++||||+|||++|+++|+.
T Consensus 316 ~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~ 395 (621)
T 3vta_A 316 ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPS 395 (621)
T ss_dssp CCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCS
T ss_pred ccccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCc
Confidence 46788999999999999999999999999999866666666778999999999999877899999999999999999986
Q ss_pred CCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcC
Q 043420 470 ASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAV 549 (702)
Q Consensus 470 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al 549 (702)
..... .......|..+||||||||||||+||||||+||+|+|++||++||+||+++.....+..+++||+|+||+.+|+
T Consensus 396 ~~~~~-~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~~~A~ 474 (621)
T 3vta_A 396 VAPVG-GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKAV 474 (621)
T ss_dssp SSCBT-TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCHHHHS
T ss_pred ccccc-CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCCCCchhcCCCccCHHHhc
Confidence 54322 23345679999999999999999999999999999999999999999999877655447899999999999999
Q ss_pred CCceeeeCCchhhHhhhhcCCCCCCcceeecCCCccccCCCCCCccCCCCCeEEEecCCCCCccEEEEEEEEecCCCCee
Q 043420 550 NPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSAVST 629 (702)
Q Consensus 550 ~~glv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~t~~rtvtnvg~~~~t 629 (702)
+||||||++.+||+.|||+++|+.++++.++++...|+........+||||||++........+++|+|||||||+..+|
T Consensus 475 ~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~t 554 (621)
T 3vta_A 475 RPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQAST 554 (621)
T ss_dssp CCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEE
T ss_pred CCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeE
Confidence 99999999999999999999999999999999988998766666789999999997654445789999999999999999
Q ss_pred EEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEEEEEEECCCceEEeEEEEEe
Q 043420 630 YRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDDGVHHVRSPVVAFV 696 (702)
Q Consensus 630 y~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~~~~~~~~~~v~~P~~~~~ 696 (702)
|++++++|+|++|+|+|++|+|++.+|+++|+|||+.. ..+.|+||+|+|+|++|+||+||+|+.
T Consensus 555 y~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 555 YRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred EEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 99999999999999999999999999999999999854 457799999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.8e-83 Score=767.95 Aligned_cols=530 Identities=22% Similarity=0.285 Sum_probs=421.9
Q ss_pred cccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCC-------------CcccCceeEeeee
Q 043420 78 DFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSS-------------NFTCNNKIIGAKF 144 (702)
Q Consensus 78 ~~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~-------------~~~~n~kiig~~~ 144 (702)
++++++.+|+++++|+||+|||||||||++||+|.+ +..|++.|.... ..+||+|++++++
T Consensus 2 d~i~~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~ 75 (926)
T 1xf1_A 2 DPSQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHD 75 (926)
T ss_dssp CTTCCHHHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEE
T ss_pred CccccHHHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeec
Confidence 578999999999999999999999999999999984 356777765321 2279999999999
Q ss_pred cccCCCCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC--CCHHHHHHHHHH
Q 043420 145 YRSDKKFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG--CADADILAAFDD 222 (702)
Q Consensus 145 ~~~~~~~~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~ 222 (702)
|. ++ ..+ .|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|+..+ +..+++++||++
T Consensus 76 ~~-~~------~~~-~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~ 143 (926)
T 1xf1_A 76 YS-KD------GKT-AVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRD 143 (926)
T ss_dssp SC-CC------SCC-CCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred cc-cC------CCC-CCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHH
Confidence 97 32 122 288999999999999997654332 13458999999999999998876 566789999999
Q ss_pred HHHCCCCEEEEeecCCCC-CCCccCHHHHHHHHHHhCCCEEEEccCCCCCC-------------CCCcCC--CCCceEEe
Q 043420 223 AIADGVDIISISVGSFSA-VNYFEDTIAIGSFHAMKKGILTSNSAGNSGPD-------------AASLAN--VAPWTLSV 286 (702)
Q Consensus 223 A~~~gvdVIn~SlG~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~--~a~~vitV 286 (702)
|+++|+||||||||.... .....+++..+++.|.++|++||+||||+|+. ..++.+ .+||+|+|
T Consensus 144 Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitV 223 (926)
T 1xf1_A 144 AINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTV 223 (926)
T ss_dssp HHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEE
T ss_pred HHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEE
Confidence 999999999999998732 34456788999999999999999999999963 223333 47999999
Q ss_pred eeeccCcceeeEEEe-CCCeEEeeEeecccC--CCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEe
Q 043420 287 AASTVDRKFVTRVKL-GNGEVYEGISINTID--YKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCD 363 (702)
Q Consensus 287 gA~~~~~~~~~~~~~-~~g~~~~g~~~~~~~--~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~ 363 (702)
||++.++.+...+.+ +++....+.++.... ..+..+++++... .|.+..+ .+++|||+||+
T Consensus 224 gA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------------g~~~~~~--~~v~Gkivl~~ 287 (926)
T 1xf1_A 224 ASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------------GTKEDDF--KDVKGKIALIE 287 (926)
T ss_dssp EEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------------SCSTTTT--TTCTTSEEEEE
T ss_pred eccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------------CCCccch--hhcCCeEEEEE
Confidence 999999999988887 565555555443221 1367899998643 3666555 68999999999
Q ss_pred e-----cchhhhhhhcCceEEEEeeCCCCCC----CcccCcceEEecchhHHHHHHHHhcCCCcEEEEe-ccccccccCC
Q 043420 364 E-----LNDGFGAATARAVGSVMQGNDDRDV----AYSFPLPNSYLDLYDGSKIASYLNSTSIPTATIL-KSTAEKNEFA 433 (702)
Q Consensus 364 ~-----~~~~~~~~~aGa~g~i~~~~~~~~~----~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~-~~~~~~~~~~ 433 (702)
| .+|..+++.+|++|+|++|+..... .....+|+.+|+..++..|++ ....++++. ....+.....
T Consensus 288 rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~ 363 (926)
T 1xf1_A 288 RGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASG 363 (926)
T ss_dssp CCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSC
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCc
Confidence 8 5688899999999999999875432 256789999999999998874 444555552 2223455667
Q ss_pred CcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHH----hCCC
Q 043420 434 PVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKS----FYPS 509 (702)
Q Consensus 434 ~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~ 509 (702)
+.++.||||||+. ++++||||+|||++|+++++.. .|..+||||||||||||+||||+| .||+
T Consensus 364 ~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-----------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~ 430 (926)
T 1xf1_A 364 TKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-----------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPD 430 (926)
T ss_dssp SBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-----------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSSS
T ss_pred ceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-----------cceecCccchhHHHHHHHHHHHHHHHhccCCC
Confidence 8999999999997 9999999999999999999763 699999999999999999999964 5999
Q ss_pred CCHHH----HHHHHHhcCcCCCCCCCCC--CCccCCCCCcCccCcCCCceeeeCCchhhHhhhhcCCCCCCcceeecCCC
Q 043420 510 WSPAA----IKSALMTTATPMSVEANSD--AEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYSDKNLSLVTGDN 583 (702)
Q Consensus 510 lsp~~----ik~~L~~TA~~~~~~~~~~--~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 583 (702)
|+|+| ||++||+||+++....... .+++||+|+||+.+|++|.+ |||..+++..+
T Consensus 431 ~sp~~~~~~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~-------- 491 (926)
T 1xf1_A 431 MTPSERLDLAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSK-------- 491 (926)
T ss_dssp SHHHHHHHHHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSC--------
T ss_pred CCHHHHHHHHHHHHHhcCCCcccCCCCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcce--------
Confidence 99997 9999999999886543221 57899999999999999955 68876654322
Q ss_pred ccccCCCCCCccCCCCCeEEEecCCCCCccEEEEEEEEecCCC--CeeEEEEEEc--CCCeEEEEEcCeEEEeeC-----
Q 043420 584 RSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVTNVGSA--VSTYRAVVYT--RPGLMIKVQPSVLYFKSL----- 654 (702)
Q Consensus 584 ~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~t~~rtvtnvg~~--~~ty~~~~~~--~~g~~v~v~p~~l~~~~~----- 654 (702)
|.+..+. ...+++|||||+|+. ..+|++++.. |.+..++|.|..|.|..+
T Consensus 492 ------------------i~l~~~~---~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv 550 (926)
T 1xf1_A 492 ------------------VHLNNVS---DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITI 550 (926)
T ss_dssp ------------------EEEEEEC---SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEE
T ss_pred ------------------eeccccC---ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEE
Confidence 2333332 468899999999985 4578888765 678889998887766544
Q ss_pred --CeEEEEEEEEEEee--------CCCCCeEEEEEEEE--CCCce-EEeEEEEEecC
Q 043420 655 --YQKQSFVVTVTANV--------GKSVNMISASLVWD--DGVHH-VRSPVVAFVAP 698 (702)
Q Consensus 655 --g~~~~~~vt~~~~~--------~~~~~~~~G~~~~~--~~~~~-v~~P~~~~~~~ 698 (702)
||+++|+|||++.. .+++.|+||+|+|+ ++.|. ||+||+++.++
T Consensus 551 ~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 551 PANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRGD 607 (926)
T ss_dssp CTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEESC
T ss_pred CCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEecC
Confidence 99999999999751 23556899999998 56665 99999999764
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.8e-60 Score=537.90 Aligned_cols=337 Identities=28% Similarity=0.407 Sum_probs=279.6
Q ss_pred CcEEEEecceeeEEEEEeCHHHHHHH-----------hcCCCeEEEEeCceeccccC-----CCccccCchhhcccCCCC
Q 043420 29 DHLLHSYHRSFNGFVAKLTHDEAQRL-----------KGMQGVMSVFPNGKKQLHTT-----RSWDFMGFSEHVKRATTE 92 (702)
Q Consensus 29 ~~~~~~y~~~~ng~s~~l~~~~~~~l-----------~~~p~V~~v~~~~~~~~~~~-----~s~~~~g~~~~w~~~~~G 92 (702)
.+++++| ..|+||+++++.+++++| +++|+|++|++++.+++... .....++++.+|..+++|
T Consensus 60 ~~v~~~~-~~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G 138 (539)
T 3afg_A 60 AKIKYNY-HIIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDG 138 (539)
T ss_dssp CEEEEEC-SSSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCCC
T ss_pred CeEEEEe-eeeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCCC
Confidence 5789999 479999999999999999 89999999999999886532 234456777899999999
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCCChhHHHHH
Q 043420 93 SDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSST 172 (702)
Q Consensus 93 ~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~gHGThVAgi 172 (702)
+||+|||||||||++||+|.+ ++++.++|. ++ ...+.|+.|||||||||
T Consensus 139 ~gv~VaViDtGid~~Hpdl~~------------------------~i~~~~d~~-~~------~~~~~D~~gHGThVAgi 187 (539)
T 3afg_A 139 SGITIGIIDTGIDASHPDLQG------------------------KVIGWVDFV-NG------KTTPYDDNGHGTHVASI 187 (539)
T ss_dssp TTCEEEEEESBCCTTSGGGTT------------------------TEEEEEETT-TC------CSSCCBSSSHHHHHHHH
T ss_pred CCcEEEEEecCCCCCChHHhC------------------------CEeeeEECC-CC------CCCCCCCCCCHHHHHHH
Confidence 999999999999999999973 467777776 22 23567899999999999
Q ss_pred hccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC----CCCEEEEeecCCCCCCCccCH
Q 043420 173 AAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD----GVDIISISVGSFSAVNYFEDT 247 (702)
Q Consensus 173 aaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~----gvdVIn~SlG~~~~~~~~~~~ 247 (702)
|||+... ..|.+.||||+|+|+++|+++..+ ++.+++++||+||+++ |++|||||||... .....+.
T Consensus 188 iag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~-~~~~~~~ 259 (539)
T 3afg_A 188 AAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ-SSDGTDS 259 (539)
T ss_dssp HHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS-CCCSCSH
T ss_pred HhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC-CCccchH
Confidence 9987532 123358999999999999998876 7889999999999975 9999999999873 3455788
Q ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCCC--cCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccCCCCceeeEE
Q 043420 248 IAIGSFHAMKKGILTSNSAGNSGPDAAS--LANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLI 325 (702)
Q Consensus 248 ~~~a~~~a~~~Gi~vV~AAGN~G~~~~~--~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv 325 (702)
+..+++++.++|++||+||||+|+...+ .+...+++|+|||++.+
T Consensus 260 l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~--------------------------------- 306 (539)
T 3afg_A 260 LSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY--------------------------------- 306 (539)
T ss_dssp HHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT---------------------------------
T ss_pred HHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC---------------------------------
Confidence 9999999999999999999999986543 45577999999986532
Q ss_pred EcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcceEEecchhH
Q 043420 326 YGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDG 405 (702)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p~~~i~~~~~ 405 (702)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCCCCCCCceE
Q 043420 406 SKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNI 485 (702)
Q Consensus 406 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~y~~ 485 (702)
+.++.||||||+. ++++||||+|||++|++++...... .......|..
T Consensus 307 ----------------------------~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~--~~~~~~~y~~ 354 (539)
T 3afg_A 307 ----------------------------DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM--GQPINDYYTA 354 (539)
T ss_dssp ----------------------------SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC--SEECSSSEEE
T ss_pred ----------------------------cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC--CCCCcccccc
Confidence 3478999999997 8999999999999999998653211 0111235999
Q ss_pred eccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCCCc
Q 043420 486 ISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPG 552 (702)
Q Consensus 486 ~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~g 552 (702)
++|||||||||||++|||+|++|+|+|++||++|++||+++..... .++.||+|+||+.+|++..
T Consensus 355 ~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~~--~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 355 APGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDEI--ADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGGC--SBTTTBTCBCCHHHHHTGG
T ss_pred cCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCC--CccCccCCccCHHHHhhhc
Confidence 9999999999999999999999999999999999999998764321 2678999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.3e-56 Score=490.62 Aligned_cols=318 Identities=25% Similarity=0.373 Sum_probs=265.6
Q ss_pred CCcEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEeCceeccccC--------------CCc--cccCchhhcccCCC
Q 043420 28 SDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTT--------------RSW--DFMGFSEHVKRATT 91 (702)
Q Consensus 28 ~~~~~~~y~~~~ng~s~~l~~~~~~~l~~~p~V~~v~~~~~~~~~~~--------------~s~--~~~g~~~~w~~~~~ 91 (702)
..+++++|. .+++|+++++.+++++|+++|+|++|++++.++++.. ..| +.++++.+|+.+ +
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~ 100 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-D 100 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-S
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-C
Confidence 457899995 5999999999999999999999999999998876432 122 235677799998 9
Q ss_pred CCC--cEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCCChhHH
Q 043420 92 ESD--IIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHT 169 (702)
Q Consensus 92 G~g--V~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~gHGThV 169 (702)
|+| |+|||||||||++||+|.+ ++...++|. ++... .+..+..|..||||||
T Consensus 101 G~g~~v~VaViDtGid~~Hp~l~~------------------------~~~~~~~~~-~~~~~-~~~~~~~d~~gHGT~v 154 (395)
T 2z2z_A 101 GSVSVIQVAVLDTGVDYDHPDLAA------------------------NIAWCVSTL-RGKVS-TKLRDCADQNGHGTHV 154 (395)
T ss_dssp SCCTTCEEEEEESCBCTTCTTTGG------------------------GEEEEEECG-GGCCB-CCHHHHBCSSSHHHHH
T ss_pred CCCCcEEEEEEcCCCCCCChhHhh------------------------ccccCcccc-CCccc-CCCCCCCCCCCCHHHH
Confidence 999 9999999999999999984 244555555 22111 0011246889999999
Q ss_pred HHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC--------------------CC
Q 043420 170 SSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD--------------------GV 228 (702)
Q Consensus 170 AgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--------------------gv 228 (702)
||||+|.. + ..|+ .||||+|+|+.+|+++..+ ++.+++++||+||+++ ++
T Consensus 155 Agiia~~~-n---~~g~-----~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (395)
T 2z2z_A 155 IGTIAALN-N---DIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAA 225 (395)
T ss_dssp HHHHHCCC-S---SSSC-----CCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCC
T ss_pred HHHHHeec-C---CCce-----EEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCC
Confidence 99999873 1 1222 8999999999999998876 7888999999999998 99
Q ss_pred CEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEe
Q 043420 229 DIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYE 308 (702)
Q Consensus 229 dVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~ 308 (702)
+|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 226 ~Vin~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------- 285 (395)
T 2z2z_A 226 EVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN---------------- 285 (395)
T ss_dssp SEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT----------------
T ss_pred eEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC----------------
Confidence 99999999872 2356778888899999999999999998777778888999999997543
Q ss_pred eEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCC
Q 043420 309 GISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRD 388 (702)
Q Consensus 309 g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~ 388 (702)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeecc
Q 043420 389 VAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWT 468 (702)
Q Consensus 389 ~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~ 468 (702)
+.++.||++|| +|+|||++|+++++
T Consensus 286 ---------------------------------------------~~~a~fS~~G~----------~v~APG~~i~s~~~ 310 (395)
T 2z2z_A 286 ---------------------------------------------DNIASFSNRQP----------EVSAPGVDILSTYP 310 (395)
T ss_dssp ---------------------------------------------SCBCTTSCSSC----------SEEEECSSEEEEET
T ss_pred ---------------------------------------------CCCCcccCCCC----------CEEeCCCCeeeecC
Confidence 35789999997 67999999999987
Q ss_pred CCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCC-------------CCCHHHHHHHHHhcCcCCCCCCCCCCC
Q 043420 469 QASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYP-------------SWSPAAIKSALMTTATPMSVEANSDAE 535 (702)
Q Consensus 469 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-------------~lsp~~ik~~L~~TA~~~~~~~~~~~~ 535 (702)
.. .|..++|||||||||||++|||+|++| .|++.+||++|++||+++...+ .+
T Consensus 311 ~~-----------~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g---~~ 376 (395)
T 2z2z_A 311 DD-----------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG---WD 376 (395)
T ss_dssp TT-----------EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS---SB
T ss_pred CC-----------ceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC---CC
Confidence 64 699999999999999999999999999 9999999999999999986543 35
Q ss_pred ccCCCCCcCccCcCCC
Q 043420 536 FAYGSGHLNPSMAVNP 551 (702)
Q Consensus 536 ~~~G~G~in~~~Al~~ 551 (702)
..||+|+||+.+|++.
T Consensus 377 ~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 377 ADYGYGVVRAALAVQA 392 (395)
T ss_dssp TTTBTCBCCHHHHHHH
T ss_pred CCccCceeCHHHHHHH
Confidence 7899999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3e-55 Score=491.64 Aligned_cols=333 Identities=20% Similarity=0.279 Sum_probs=265.6
Q ss_pred CCCcEEEEecceeeEEEEEeCHHHHHHHhc-CCCeEEEEeCceeccccCC-------------CccccCc--h-hhcccC
Q 043420 27 ASDHLLHSYHRSFNGFVAKLTHDEAQRLKG-MQGVMSVFPNGKKQLHTTR-------------SWDFMGF--S-EHVKRA 89 (702)
Q Consensus 27 ~~~~~~~~y~~~~ng~s~~l~~~~~~~l~~-~p~V~~v~~~~~~~~~~~~-------------s~~~~g~--~-~~w~~~ 89 (702)
.+.+++++| ..|++|+++++.+++++|++ +|+|++|++++.++++... .|.+..+ . .+|+.+
T Consensus 64 ~g~~v~~~~-~~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~ 142 (471)
T 3t41_A 64 KSLNVVYNI-PELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDL 142 (471)
T ss_dssp HTCEEEEEE-GGGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGC
T ss_pred CCCEEEEec-CCccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhcc
Confidence 345788888 55999999999999999999 9999999999888775432 2333332 2 589999
Q ss_pred CCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCCChhHH
Q 043420 90 TTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHT 169 (702)
Q Consensus 90 ~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~gHGThV 169 (702)
++|+||+|||||||||++||+|.+.- |.+. ..++....|.........+...+.|..||||||
T Consensus 143 ~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~v 205 (471)
T 3t41_A 143 PKHANTKIAIIDTGVMKNHDDLKNNF-------STDS----------KNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMV 205 (471)
T ss_dssp CSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC----------EECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHH
T ss_pred CCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC----------cccccCCCccCCCcccCCCCCCCcCCCCccchh
Confidence 99999999999999999999998531 1110 011111122211111112234567899999999
Q ss_pred HHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHHCCCCEEEEeecCCCCCC-------
Q 043420 170 SSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSFSAVN------- 242 (702)
Q Consensus 170 AgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~gvdVIn~SlG~~~~~~------- 242 (702)
||||+|++. ..||||+|+|+.+|+++...+..+++++||+||+++|++|||||||......
T Consensus 206 Agiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~ 273 (471)
T 3t41_A 206 SGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTF 273 (471)
T ss_dssp HHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSE
T ss_pred hheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCcccccccc
Confidence 999998642 3899999999999999886689999999999999999999999999741110
Q ss_pred -----CccCHHHHHHHHHHhCCCEEEEccCCCCCCCCC------------------cCCCCCceEEeeeeccCcceeeEE
Q 043420 243 -----YFEDTIAIGSFHAMKKGILTSNSAGNSGPDAAS------------------LANVAPWTLSVAASTVDRKFVTRV 299 (702)
Q Consensus 243 -----~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~a~~vitVgA~~~~~~~~~~~ 299 (702)
...+.+..++..+.++|++||+||||+|..... .+..++++|+|||++.+
T Consensus 274 ~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~~------- 346 (471)
T 3t41_A 274 RKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQK------- 346 (471)
T ss_dssp ESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECTT-------
T ss_pred ccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCCC-------
Confidence 223567888888999999999999999976532 55678999999997643
Q ss_pred EeCCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEE
Q 043420 300 KLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGS 379 (702)
Q Consensus 300 ~~~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~ 379 (702)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeC
Q 043420 380 VMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAP 459 (702)
Q Consensus 380 i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~AP 459 (702)
+.++.||++||+. |||+||
T Consensus 347 ------------------------------------------------------~~~a~fS~~G~~~-------~di~AP 365 (471)
T 3t41_A 347 ------------------------------------------------------SNLSEFSNFGMNY-------TDIAAP 365 (471)
T ss_dssp ------------------------------------------------------SSBCTTCCBCTTT-------CCEEEE
T ss_pred ------------------------------------------------------CCCCCccCCCCCC-------CeEEec
Confidence 3578999999973 599999
Q ss_pred CCc----------------------EEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCC-CCCHHHHH
Q 043420 460 GVD----------------------ILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYP-SWSPAAIK 516 (702)
Q Consensus 460 G~~----------------------I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P-~lsp~~ik 516 (702)
|++ |+++++.. .|..++|||||||||||++|||+|++| .|+|++||
T Consensus 366 G~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-----------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~ 434 (471)
T 3t41_A 366 GGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-----------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAI 434 (471)
T ss_dssp CCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-----------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred CCCcccccccccccccccccccCceeEecCCCC-----------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHH
Confidence 987 88887653 699999999999999999999999999 89999999
Q ss_pred HHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCCCc
Q 043420 517 SALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPG 552 (702)
Q Consensus 517 ~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~g 552 (702)
++|++||.++... .+..||+|+||+.+|++..
T Consensus 435 ~~L~~tA~~~~~~----~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 435 ELLYQHGTSKNNK----PFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHHHSBCCSCC----CHHHHTTCBBCHHHHTTTT
T ss_pred HHHHHhCCCCCCC----CcCccccChhCHHHHHHHH
Confidence 9999999987652 3678999999999999853
No 7
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=4.9e-54 Score=476.79 Aligned_cols=376 Identities=21% Similarity=0.305 Sum_probs=272.7
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|+.+ |+||+|||||||||++||+|.+. ++..+++...+ +...
T Consensus 10 ~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~------------------------~~~~~~~~~~~-----~~~~ 58 (441)
T 1y9z_A 10 FVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN------------------------NVTGTNNSGTG-----NWYQ 58 (441)
T ss_dssp HTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS------------------------EEEECCCTTSC-----CTTC
T ss_pred hcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC------------------------cccCcccCCCC-----CCCC
Confidence 46777799865 77999999999999999999843 22222222111 1234
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCC--eEEEEEEecCCC-CCHHHHHHHHHHHHHC-CCCEEEEe
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSA--RIAVYKICWFDG-CADADILAAFDDAIAD-GVDIISIS 234 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~A~~~-gvdVIn~S 234 (702)
+.|..||||||||||+|.... .|+ .||||+| +|+.+|+++..+ +..+++++||+||+++ |++|||||
T Consensus 59 ~~d~~gHGT~vAgiia~~~~~----~g~-----~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S 129 (441)
T 1y9z_A 59 PGNNNAHGTHVAGTIAAIANN----EGV-----VGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMS 129 (441)
T ss_dssp CCSSCCHHHHHHHHHHCCCSS----SBC-----CCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCCCcHHHHHHHHhcccCC----CCc-----eEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeC
Confidence 668899999999999997521 233 8999995 999999998876 7888999999999999 99999999
Q ss_pred ecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEe-------------
Q 043420 235 VGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKL------------- 301 (702)
Q Consensus 235 lG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~------------- 301 (702)
||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+.....+...
T Consensus 130 ~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i 205 (441)
T 1y9z_A 130 LGGSG----STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAI 205 (441)
T ss_dssp CCBSC----CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSE
T ss_pred CCCCC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCe
Confidence 99872 2346677888899999999999999998777778888999999999877543221111
Q ss_pred ------CCCe----EEeeEeecccCC-C-Cceee--EEEcCCCCCCCCCCCCCCCCccCCC--CCCccCcCCeEEEEeec
Q 043420 302 ------GNGE----VYEGISINTIDY-K-GKMFP--LIYGGDAPNRTGGYQGSNSRFCSLG--SLDEKLVQGKIVLCDEL 365 (702)
Q Consensus 302 ------~~g~----~~~g~~~~~~~~-~-~~~~~--lv~~~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~gkivl~~~~ 365 (702)
+++. .+.|.+++.... + ...++ +.+..... .+........|.+. .++..+++|||++|+|.
T Consensus 206 ~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~---~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg 282 (441)
T 1y9z_A 206 LSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPI---NASATGALAECTVNGTSFSCGNMANKICLVERV 282 (441)
T ss_dssp EEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCC---CCEEEEEEEEEEEETTEEECCCCTTEEEEEECC
T ss_pred eccccCCCcccceeecccccccccccCcccccccCCcccccccc---ccccccchhccccccccccCCCccccEEEEecc
Confidence 1111 122333221110 0 00000 11111000 00001123457643 56778999999999873
Q ss_pred ----------chhhhhhhcCceEEEEeeCCCCCC---------CcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccc
Q 043420 366 ----------NDGFGAATARAVGSVMQGNDDRDV---------AYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKST 426 (702)
Q Consensus 366 ----------~~~~~~~~aGa~g~i~~~~~~~~~---------~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~ 426 (702)
+|..+++++|+.++|++++..... ...+.+|.+.++.++|+.|+.++.++ ++
T Consensus 283 ~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t----- 353 (441)
T 1y9z_A 283 GNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TT----- 353 (441)
T ss_dssp SCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EE-----
T ss_pred ccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----cc-----
Confidence 467899999999999999864311 24567999999999999998775421 11
Q ss_pred cccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHh
Q 043420 427 AEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSF 506 (702)
Q Consensus 427 ~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~ 506 (702)
+ +.... ..|..++|||||||||||++|||+|+
T Consensus 354 -----------------------------~--------~~~~~-----------~~y~~~sGTSmAaP~VAG~aALl~~~ 385 (441)
T 1y9z_A 354 -----------------------------V--------SNQGN-----------QDYEYYNGTSMATPHVSGVATLVWSY 385 (441)
T ss_dssp -----------------------------E--------EEEEE-----------ESEEEECSHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------c--------ccccC-----------CCceeecccccCCcccchHHHHHHHH
Confidence 1 11111 36999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCCCceeeeCCchhhHhhhhcCCCC
Q 043420 507 YPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYDAGELDYVKFLCGQGYS 572 (702)
Q Consensus 507 ~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~glv~~~~~~~~~~~l~~~~~~ 572 (702)
||+|+|++||++||+||+++...+ .+..||+|+||+.+|+ ||+.|||.++++
T Consensus 386 ~p~~sp~~ik~~L~~TA~~~~~~g---~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 386 HPECSASQVRAALNATADDLSVAG---RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp CTTSCHHHHHHHHHHHSBCCSSSS---CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred CCCCCHHHHHHHHHhhchhhccCC---CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 999999999999999999987654 3568999999999994 799999998754
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.5e-52 Score=478.68 Aligned_cols=344 Identities=24% Similarity=0.301 Sum_probs=260.8
Q ss_pred CcEEEEecceeeEEEEEeCH---H-HHHHHh--cCCCeEEEEeCceeccccC----------------------------
Q 043420 29 DHLLHSYHRSFNGFVAKLTH---D-EAQRLK--GMQGVMSVFPNGKKQLHTT---------------------------- 74 (702)
Q Consensus 29 ~~~~~~y~~~~ng~s~~l~~---~-~~~~l~--~~p~V~~v~~~~~~~~~~~---------------------------- 74 (702)
.++++++ ..+++++++++. + .+++|+ ++|+|++|+|+..+++...
T Consensus 53 ~~v~~~~-~~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (671)
T 1r6v_A 53 GKVVLEL-PQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEEL 131 (671)
T ss_dssp CEEEEEE-GGGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTT
T ss_pred CeEEEEc-CCCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccc
Confidence 4677888 678999999864 3 356776 4899999999976654310
Q ss_pred --CCc--cccCchhh-cccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCC
Q 043420 75 --RSW--DFMGFSEH-VKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDK 149 (702)
Q Consensus 75 --~s~--~~~g~~~~-w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~ 149 (702)
..| +.++++.+ |+. ++|+||+|||||||||++||+|.+.- + .+.+.+. +.
T Consensus 132 ~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~-------~----------------~g~~~~~-~~ 186 (671)
T 1r6v_A 132 SNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV-------I----------------AGYRPAF-DE 186 (671)
T ss_dssp GGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB-------C----------------CEEEGGG-TE
T ss_pred cccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE-------E----------------ecccccC-CC
Confidence 011 12456667 988 89999999999999999999998531 1 1111111 10
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecC------CC-CCHHHHHHHHHH
Q 043420 150 KFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWF------DG-CADADILAAFDD 222 (702)
Q Consensus 150 ~~~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~ 222 (702)
..+. ..+..|..||||||||||||..+ + .|+ .||||+|+|+.+|+++. .+ ...+.+++||+|
T Consensus 187 ~~p~--~~d~~d~~gHGThVAGiIAa~~n-g---~gv-----~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~ 255 (671)
T 1r6v_A 187 ELPA--GTDSSYGGSAGTHVAGTIAAKKD-G---KGI-----VGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIW 255 (671)
T ss_dssp EECT--TCBCCTTCSHHHHHHHHHHCCCS-S---SSC-----CCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHH
T ss_pred cCCC--CCCCccCCCcchhhhhhhhccCC-C---Cce-----EEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHH
Confidence 0000 12234678999999999999741 1 232 89999999999999976 23 456679999999
Q ss_pred HHHCCCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCC-CCcCCCCCceEEeeeeccCcceeeEEEe
Q 043420 223 AIADGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDA-ASLANVAPWTLSVAASTVDRKFVTRVKL 301 (702)
Q Consensus 223 A~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~a~~vitVgA~~~~~~~~~~~~~ 301 (702)
|+++|++|||||||... ....+..++..|.++|++||+||||+|... ..++...+++|+|||++.+..
T Consensus 256 A~~~gadVIN~SlG~~~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~------- 324 (671)
T 1r6v_A 256 ATDHGAKVMNHSWGGWG----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG------- 324 (671)
T ss_dssp HHHTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-------
T ss_pred HHHcCCCEEEeCCCCCC----CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-------
Confidence 99999999999999862 245778888899999999999999999764 456677899999999764410
Q ss_pred CCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEE
Q 043420 302 GNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVM 381 (702)
Q Consensus 302 ~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~ 381 (702)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCC
Q 043420 382 QGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGV 461 (702)
Q Consensus 382 ~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~ 461 (702)
...++.||++||.. ||+|||+
T Consensus 325 ---------------------------------------------------~~~~a~fSn~G~~v--------dv~APG~ 345 (671)
T 1r6v_A 325 ---------------------------------------------------TFRVAGFSSRSDGV--------SVGAPGV 345 (671)
T ss_dssp ---------------------------------------------------EEEECSSSCCCTTE--------EEEEECS
T ss_pred ---------------------------------------------------ceeeccccCCCCCe--------eEEecCC
Confidence 01368999999976 9999999
Q ss_pred cEEeeccCCCCCCC-------CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCC
Q 043420 462 DILASWTQASSPSE-------GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDA 534 (702)
Q Consensus 462 ~I~sa~~~~~~~~~-------~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~ 534 (702)
+|+++++....... .......|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...+ .
T Consensus 346 ~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g---~ 422 (671)
T 1r6v_A 346 TILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG---W 422 (671)
T ss_dssp SEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS---C
T ss_pred CEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC---C
Confidence 99999875421100 1112347999999999999999999999999999999999999999999887553 3
Q ss_pred CccCCCCCcCccCcCCCceeeeCCchhh
Q 043420 535 EFAYGSGHLNPSMAVNPGLVYDAGELDY 562 (702)
Q Consensus 535 ~~~~G~G~in~~~Al~~glv~~~~~~~~ 562 (702)
+..||+|+||+.+|++..|..+....+|
T Consensus 423 d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 423 DHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp BTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CCCcccceeCHHHHhhhhcCCCCCccce
Confidence 5689999999999999877655544343
No 9
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.8e-52 Score=433.75 Aligned_cols=260 Identities=27% Similarity=0.405 Sum_probs=221.1
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|+.+++|+||+|+|||||||++||+|+ +...++|. .+ ...
T Consensus 10 ~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~--------------------------~~~g~~~~-~~------~~~ 56 (274)
T 1r0r_E 10 LIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN--------------------------VVGGASFV-AG------EAY 56 (274)
T ss_dssp HTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC--------------------------EEEEEECS-TT------CCT
T ss_pred hcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc--------------------------CCCCcccc-CC------CCC
Confidence 4677889999999999999999999999999995 23444555 21 122
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCCCEEEEeecC
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGVDIISISVGS 237 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~SlG~ 237 (702)
+.|..||||||||||+|... ..| +.||||+|+|+.+|++...+ +..++++++|+||++.+++|||||||.
T Consensus 57 ~~d~~gHGT~vAgiia~~~~----~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 127 (274)
T 1r0r_E 57 NTDGNGHGTHVAGTVAALDN----TTG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGG 127 (274)
T ss_dssp TCCSSSHHHHHHHHHHCCSS----SSB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEB
T ss_pred CCCCCCCHHHHHHHHHccCC----CCc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCC
Confidence 46789999999999998731 122 28999999999999998776 788899999999999999999999998
Q ss_pred CCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCC----CCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeec
Q 043420 238 FSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDA----ASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISIN 313 (702)
Q Consensus 238 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~ 313 (702)
.. ....+..++.++.++|++||+||||+|... ..++...+++|+|||++.+
T Consensus 128 ~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------- 182 (274)
T 1r0r_E 128 AS----GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN--------------------- 182 (274)
T ss_dssp SS----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred CC----CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC---------------------
Confidence 73 246778888899999999999999998753 3445677899999987543
Q ss_pred ccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCccc
Q 043420 314 TIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSF 393 (702)
Q Consensus 314 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~ 393 (702)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCC
Q 043420 394 PLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSP 473 (702)
Q Consensus 394 ~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~ 473 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 183 ----------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~--- 211 (274)
T 1r0r_E 183 ----------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYSTYPTN--- 211 (274)
T ss_dssp ----------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETTT---
T ss_pred ----------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEeecCCC---
Confidence 3468899999854 9999999999998754
Q ss_pred CCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCC
Q 043420 474 SEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVN 550 (702)
Q Consensus 474 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 550 (702)
.|..++|||||||||||++|||+|++|+|++++||++|++||+++. .+..||+|+||+.+|++
T Consensus 212 --------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 212 --------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp --------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS------CHHHHTTCBCCHHHHTC
T ss_pred --------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC------CCCCcccCccCHHHHhC
Confidence 6999999999999999999999999999999999999999999885 26789999999999985
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=2.3e-54 Score=466.13 Aligned_cols=306 Identities=21% Similarity=0.212 Sum_probs=204.2
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCc--ccCcee----EeeeecccCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNF--TCNNKI----IGAKFYRSDKKFS 152 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~--~~n~ki----ig~~~~~~~~~~~ 152 (702)
..|++++|+++..|++|+|||||||||++||+|.+..+.+....|+..++..... ..+..+ .....+.......
T Consensus 17 ipG~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (357)
T 4h6x_A 17 IPGLADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAV 96 (357)
T ss_dssp STTHHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHH
T ss_pred ccCHHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccc
Confidence 4588999999999999999999999999999999877666777787665543211 000000 0000000000000
Q ss_pred CCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC------CCHHHHHHHHHHHHHC
Q 043420 153 PFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG------CADADILAAFDDAIAD 226 (702)
Q Consensus 153 ~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~i~~ai~~A~~~ 226 (702)
..+..++.|.+||||||||||+|+... | +.||||+|+|+.+|++.... +...+++++|+||++.
T Consensus 97 ~~~~~~~~D~~gHGThVAGiiag~~~~-----g-----~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~ 166 (357)
T 4h6x_A 97 IPDTKDRIVLNDHACHVTSTIVGQEHS-----P-----VFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALEL 166 (357)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCTTS-----S-----CCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHT
T ss_pred cCCCCCCcCCCCcHHHHHHHHhccCCC-----C-----ceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHc
Confidence 011223456789999999999997422 2 28999999999999975421 4556789999999999
Q ss_pred CCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeE
Q 043420 227 GVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEV 306 (702)
Q Consensus 227 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~ 306 (702)
|++|||||||.........+.+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 167 g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 232 (357)
T 4h6x_A 167 GANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD-------------- 232 (357)
T ss_dssp TCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT--------------
T ss_pred CCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC--------------
Confidence 999999999987544556778888999999999999999999998877778888999999997644
Q ss_pred EeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCC
Q 043420 307 YEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDD 386 (702)
Q Consensus 307 ~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~ 386 (702)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEee
Q 043420 387 RDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILAS 466 (702)
Q Consensus 387 ~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa 466 (702)
+.++.|||||+.. .||||+|||++|+++
T Consensus 233 -----------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 233 -----------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGA 260 (357)
T ss_dssp -----------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEEC
T ss_pred -----------------------------------------------CcccccccCCCCC-----CccceeecCCCeEec
Confidence 4578999999753 589999999999999
Q ss_pred ccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHh----CCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCC
Q 043420 467 WTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSF----YPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGH 542 (702)
Q Consensus 467 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~ 542 (702)
++.. ..|..++|||||||||||++|||+++ +|.|+++|||++|++||+++...... .+.+||+|+
T Consensus 261 ~~~~----------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~~~-~~~~~G~G~ 329 (357)
T 4h6x_A 261 QPCT----------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEVVE-EPERCLRGF 329 (357)
T ss_dssp CTTC----------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------CTTCB
T ss_pred cCCC----------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCCCC-CcccceeEE
Confidence 8765 35778999999999999999999964 56899999999999999988654322 357899999
Q ss_pred cCccCcCCC
Q 043420 543 LNPSMAVNP 551 (702)
Q Consensus 543 in~~~Al~~ 551 (702)
||+.+|++.
T Consensus 330 vn~~~A~~~ 338 (357)
T 4h6x_A 330 VNIPGAMKV 338 (357)
T ss_dssp CCHHHHHHH
T ss_pred ecHHHHHHH
Confidence 999999873
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=5.9e-52 Score=432.50 Aligned_cols=263 Identities=27% Similarity=0.313 Sum_probs=217.9
Q ss_pred cccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCC
Q 043420 78 DFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFK 157 (702)
Q Consensus 78 ~~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~ 157 (702)
+.++++.+|+.+..|+||+|||||||||++||+|.+ +++..++|. +. ..
T Consensus 16 ~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~------------------------~~~~~~~~~-~~------~~ 64 (280)
T 1dbi_A 16 QNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG------------------------KVIKGYDFV-DN------DY 64 (280)
T ss_dssp GGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTT------------------------TEEEEEETT-TT------BS
T ss_pred hhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhcc------------------------Ccccceecc-CC------CC
Confidence 346777899999888899999999999999999974 255666776 22 23
Q ss_pred CCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCCCEEEEeec
Q 043420 158 SPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGVDIISISVG 236 (702)
Q Consensus 158 ~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~SlG 236 (702)
.+.|..+|||||||||+|...++. |+ .||||+|+|+.+|+++..+ +..+++++||+||++.|++|||||||
T Consensus 65 ~~~d~~gHGT~vAgiia~~~~~~~---g~-----~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G 136 (280)
T 1dbi_A 65 DPMDLNNHGTHVAGIAAAETNNAT---GI-----AGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLG 136 (280)
T ss_dssp CCCCSSSHHHHHHHHHHCCCSSSS---SC-----CCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred CCCCCCCcHHHHHHHHhCcCCCCC---cc-----eEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCC
Confidence 456889999999999999854322 22 7999999999999998766 78899999999999999999999999
Q ss_pred CCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccC
Q 043420 237 SFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTID 316 (702)
Q Consensus 237 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 316 (702)
... ....+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 137 ~~~----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------ 188 (280)
T 1dbi_A 137 CDC----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY------------------------ 188 (280)
T ss_dssp SCC----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT------------------------
T ss_pred CCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC------------------------
Confidence 872 2457788888999999999999999998766777788999999997543
Q ss_pred CCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcc
Q 043420 317 YKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLP 396 (702)
Q Consensus 317 ~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p 396 (702)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCC
Q 043420 397 NSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEG 476 (702)
Q Consensus 397 ~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~ 476 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 189 -------------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~~------ 217 (280)
T 1dbi_A 189 -------------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITGN------ 217 (280)
T ss_dssp -------------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETTT------
T ss_pred -------------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCCC------
Confidence 3468899999865 9999999999998753
Q ss_pred CCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCC
Q 043420 477 DPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVN 550 (702)
Q Consensus 477 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 550 (702)
.|..++|||||||||||++|||++ |.+++.+||++|++||+++... ...||+|+||+.+|++
T Consensus 218 -----~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 218 -----RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT-----GTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-----TTTBSSEECCHHHHHT
T ss_pred -----CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-----CCcccCCEECHHHHhc
Confidence 699999999999999999999987 8999999999999999998753 3579999999999976
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=4.5e-52 Score=430.66 Aligned_cols=259 Identities=31% Similarity=0.439 Sum_probs=222.5
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|+.+++|+||+|+|||||| .+||+|+ +...++|. .+ ...
T Consensus 10 ~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~--------------------------~~~~~~~~-~~------~~~ 55 (269)
T 1gci_A 10 RVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN--------------------------IRGGASFV-PG------EPS 55 (269)
T ss_dssp HTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC--------------------------EEEEEECS-TT------CCS
T ss_pred hcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc--------------------------ccCCcccC-CC------CCC
Confidence 46778899999999999999999999 8999995 23445555 21 123
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCCCEEEEeecC
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGVDIISISVGS 237 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~SlG~ 237 (702)
+.|..||||||||||+|... ..|+ .||||+|+|+.+|+++..+ +..+++++||+||++.+++|||||||.
T Consensus 56 ~~d~~gHGT~vAgiia~~~~----~~~~-----~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~ 126 (269)
T 1gci_A 56 TQDGNGHGTHVAGTIAALNN----SIGV-----LGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGS 126 (269)
T ss_dssp CSCSSSHHHHHHHHHHCCCS----SSBC-----CCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred CCCCCCChHHHHHHHhcCcC----CCCc-----EEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCC
Confidence 56889999999999999731 1222 8999999999999998765 788899999999999999999999998
Q ss_pred CCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccCC
Q 043420 238 FSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDY 317 (702)
Q Consensus 238 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 317 (702)
.. ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 127 ~~----~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 177 (269)
T 1gci_A 127 PS----PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN------------------------- 177 (269)
T ss_dssp SS----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-------------------------
T ss_pred CC----CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-------------------------
Confidence 73 2356788888999999999999999998777777888999999997543
Q ss_pred CCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcce
Q 043420 318 KGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPN 397 (702)
Q Consensus 318 ~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p~ 397 (702)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCC
Q 043420 398 SYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGD 477 (702)
Q Consensus 398 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 477 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 178 ------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~------- 206 (269)
T 1gci_A 178 ------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPGS------- 206 (269)
T ss_dssp ------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETTT-------
T ss_pred ------------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCCC-------
Confidence 3468899999975 9999999999998754
Q ss_pred CCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCC
Q 043420 478 PRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVN 550 (702)
Q Consensus 478 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 550 (702)
.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. .+..||+|+||+.+|++
T Consensus 207 ----~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 207 ----TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ----EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS------CHHHHTTCBCCHHHHTC
T ss_pred ----CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC------CCCCcccCccCHHHHcC
Confidence 6899999999999999999999999999999999999999999885 25689999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=7.8e-52 Score=431.80 Aligned_cols=262 Identities=29% Similarity=0.413 Sum_probs=221.5
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|..+++|+||+|||||||||++||+|+ +...+.|..+. ...
T Consensus 10 ~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~--------------------------~~~g~~~~~~~------~~~ 57 (281)
T 1to2_E 10 QIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLK--------------------------VAGGASMVPSE------TNP 57 (281)
T ss_dssp HTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC--------------------------EEEEEECCTTC------CCT
T ss_pred hcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHc--------------------------CcCCccccCCC------CCC
Confidence 4677889999999999999999999999999995 23344444111 112
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCCCEEEEeecC
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGVDIISISVGS 237 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~SlG~ 237 (702)
..|..+|||||||||+|... ..| +.||||+|+|+.+|++...+ +..++++++|+||++++++|||||||.
T Consensus 58 ~~d~~gHGT~vAgiia~~~~----~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 128 (281)
T 1to2_E 58 FQDNNSHGTHVAGTVAALNN----SIG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGG 128 (281)
T ss_dssp TCCSSSHHHHHHHHHHCCSS----SSS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEB
T ss_pred CCCCCCcHHHHHHHHhccCC----CCc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcC
Confidence 35789999999999999731 122 28999999999999998766 778899999999999999999999998
Q ss_pred CCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCC----CCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeec
Q 043420 238 FSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDA----ASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISIN 313 (702)
Q Consensus 238 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~ 313 (702)
.. ....+..++.++.++|++||+||||+|... ..++...+++|+|||++.+
T Consensus 129 ~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~--------------------- 183 (281)
T 1to2_E 129 PS----GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS--------------------- 183 (281)
T ss_dssp SC----CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT---------------------
T ss_pred CC----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC---------------------
Confidence 73 246788888899999999999999998762 3445677899999987533
Q ss_pred ccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCccc
Q 043420 314 TIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSF 393 (702)
Q Consensus 314 ~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~ 393 (702)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCC
Q 043420 394 PLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSP 473 (702)
Q Consensus 394 ~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~ 473 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 184 ----------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~~--- 212 (281)
T 1to2_E 184 ----------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPGN--- 212 (281)
T ss_dssp ----------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETTT---
T ss_pred ----------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEeecCCC---
Confidence 3468899999964 9999999999998754
Q ss_pred CCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCCC
Q 043420 474 SEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNP 551 (702)
Q Consensus 474 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~ 551 (702)
.|..++|||||||+|||++|||+|++|+|++++||++|++||+++. .++.||+|+||+.+|+++
T Consensus 213 --------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 213 --------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp --------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS------CHHHHTTCBCCHHHHTSS
T ss_pred --------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC------CCCCcccceecHHHHhhh
Confidence 6899999999999999999999999999999999999999999885 267899999999999986
No 14
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=5.4e-54 Score=487.41 Aligned_cols=317 Identities=19% Similarity=0.229 Sum_probs=49.4
Q ss_pred hhhHHHHHHHHhcCCCCCCcEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEeCceeccccCCCccccCch------h
Q 043420 11 ATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTRSWDFMGFS------E 84 (702)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~l~~~p~V~~v~~~~~~~~~~~~s~~~~g~~------~ 84 (702)
++.+++++...+.+.....++++.|+++|+||+++++.+++++|+++|+|++|+|++.++.+ ...|.+-.+. .
T Consensus 91 ~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~-~~pWgL~~i~~~~~~~~ 169 (692)
T 2p4e_P 91 SERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ-SIPWNLERITPPRYRAD 169 (692)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC------------------
T ss_pred HHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-CCCcchhhccccccccc
Confidence 34455555554444334568999999999999999999999999999999999999987653 2345443322 2
Q ss_pred hcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeeccc-CCCCCCCCCCCCCCCC
Q 043420 85 HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRS-DKKFSPFDFKSPRDSE 163 (702)
Q Consensus 85 ~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~-~~~~~~~~~~~~~D~~ 163 (702)
.|..+.+|+||+|+|||||||++||+|.+... |.+ ...+.. ++ ......+.|.+
T Consensus 170 ~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~~----------------~~~~~d~dg---~~~~~~~~D~~ 224 (692)
T 2p4e_P 170 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VTD----------------FENVPEEDG---TRFHRQASKCD 224 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ecc----------------cccccCCCC---CcccCCCCCCC
Confidence 67788999999999999999999999985410 100 000000 00 00013456899
Q ss_pred CChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC------CCCEEEEeec
Q 043420 164 GHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD------GVDIISISVG 236 (702)
Q Consensus 164 gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~------gvdVIn~SlG 236 (702)
||||||||||+|+. .||||+|+|+++|+++..| ++.+++++||+|++++ |++|||||||
T Consensus 225 GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlG 290 (692)
T 2p4e_P 225 SHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLA 290 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCC
Confidence 99999999999874 6999999999999998876 7888999999999986 8999999999
Q ss_pred CCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCC-cCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeeccc
Q 043420 237 SFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAAS-LANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTI 315 (702)
Q Consensus 237 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~ 315 (702)
+. ....+..++.++.++|++||+||||+|..... .++..+++|+|||++.+...
T Consensus 291 g~-----~s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~-------------------- 345 (692)
T 2p4e_P 291 GG-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP-------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CC-----CcHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc--------------------
Confidence 76 23556677788889999999999999976533 35678999999997654200
Q ss_pred CCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCc
Q 043420 316 DYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPL 395 (702)
Q Consensus 316 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~ 395 (702)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCC
Q 043420 396 PNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475 (702)
Q Consensus 396 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 475 (702)
...-+.||++|| ||||+|||++|+++++...
T Consensus 346 -------------------------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~~---- 376 (692)
T 2p4e_P 346 -------------------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS---- 376 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------cccccccCCCCC--------ceeEEecCCcEEeeccCCC----
Confidence 000123899998 4599999999999987531
Q ss_pred CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCC
Q 043420 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPM 526 (702)
Q Consensus 476 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~ 526 (702)
..|..++|||||||||||++|||+|++|+|+|++||++|++||.+.
T Consensus 377 -----~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 377 -----TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ---------------------------------------------------
T ss_pred -----CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 3689999999999999999999999999999999999999999653
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=4e-51 Score=426.24 Aligned_cols=261 Identities=25% Similarity=0.360 Sum_probs=223.6
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|+.. +|+||+|+|||||||++||+|.+ +++..++|. ++ ...
T Consensus 17 ~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~------------------------~~~~~~~~~-~~------~~~ 64 (279)
T 1thm_A 17 KIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG------------------------KVVGGWDFV-DN------DST 64 (279)
T ss_dssp HTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTT------------------------TEEEEEETT-TT------BSC
T ss_pred hCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhc------------------------Ccccccccc-CC------CCC
Confidence 46777899987 79999999999999999999984 355666676 22 234
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCCCEEEEeecC
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGVDIISISVGS 237 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~SlG~ 237 (702)
+.|..+|||||||||+|...++. |+ .||||+|+|+.+|+++..+ ++.+++++||+||++.|++|||||||.
T Consensus 65 ~~d~~gHGT~vAgiia~~~~n~~---g~-----~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~ 136 (279)
T 1thm_A 65 PQNGNGHGTHCAGIAAAVTNNST---GI-----AGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGG 136 (279)
T ss_dssp CCCSSSHHHHHHHHHHCCCSSSS---SC-----CCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred CCCCCCcHHHHHHHHhCccCCCC---cc-----EEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 56889999999999999864322 22 8999999999999998766 788899999999999999999999998
Q ss_pred CCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccCC
Q 043420 238 FSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDY 317 (702)
Q Consensus 238 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 317 (702)
.. ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 137 ~~----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 187 (279)
T 1thm_A 137 TV----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------------------- 187 (279)
T ss_dssp SS----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT-------------------------
T ss_pred CC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC-------------------------
Confidence 72 2457888888999999999999999998777778888999999987543
Q ss_pred CCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcce
Q 043420 318 KGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPN 397 (702)
Q Consensus 318 ~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p~ 397 (702)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCC
Q 043420 398 SYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGD 477 (702)
Q Consensus 398 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 477 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 188 ------------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~~------- 216 (279)
T 1thm_A 188 ------------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPTS------- 216 (279)
T ss_dssp ------------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETTT-------
T ss_pred ------------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCCC-------
Confidence 3468999999865 9999999999998753
Q ss_pred CCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCC
Q 043420 478 PRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVN 550 (702)
Q Consensus 478 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 550 (702)
.|..++|||||||||||++||| ++|.+++++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 217 ----~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-----~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 217 ----TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-----TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ----EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT-----TTBSSEECCHHHHHH
T ss_pred ----CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC-----ccccCCeeCHHHHhc
Confidence 6999999999999999999999 5899999999999999999987652 468999999999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=3.4e-51 Score=436.02 Aligned_cols=269 Identities=25% Similarity=0.336 Sum_probs=220.3
Q ss_pred cccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCC
Q 043420 78 DFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFK 157 (702)
Q Consensus 78 ~~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~ 157 (702)
+.++++.+|+.+++|+||+|||||||||++||+|.+ +++..++|..+. . .+..
T Consensus 26 ~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~------------------------~~~~~~~~~~~~-~--~~~~ 78 (327)
T 2x8j_A 26 EIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAE------------------------RIIGGVNLTTDY-G--GDET 78 (327)
T ss_dssp HHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGG------------------------GEEEEEECSSGG-G--GCTT
T ss_pred hhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhh------------------------cccCCccccCCC-C--CCCC
Confidence 347788899999999999999999999999999973 355566665210 0 0122
Q ss_pred CCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHH------CCCCE
Q 043420 158 SPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIA------DGVDI 230 (702)
Q Consensus 158 ~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~------~gvdV 230 (702)
...|..||||||||||+|... + .| +.||||+|+|+.+|++...+ +..+++++||+||++ .+++|
T Consensus 79 ~~~d~~gHGT~VAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~V 149 (327)
T 2x8j_A 79 NFSDNNGHGTHVAGTVAAAET-G---SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRI 149 (327)
T ss_dssp CCCCSSSHHHHHHHHHHCCCC-S---SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSE
T ss_pred CCCCCCCchHHHHHHHhccCC-C---CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceE
Confidence 356889999999999999742 1 12 28999999999999998776 788899999999999 89999
Q ss_pred EEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCC-----CCcCCCCCceEEeeeeccCcceeeEEEeCCCe
Q 043420 231 ISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDA-----ASLANVAPWTLSVAASTVDRKFVTRVKLGNGE 305 (702)
Q Consensus 231 In~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~ 305 (702)
||||||... ....+..++.++.++|++||+||||+|... ..++...+++|+|||++.+
T Consensus 150 in~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~------------- 212 (327)
T 2x8j_A 150 ITMSLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD------------- 212 (327)
T ss_dssp EEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT-------------
T ss_pred EEECCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC-------------
Confidence 999999872 235678888899999999999999999752 3455677999999997643
Q ss_pred EEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCC
Q 043420 306 VYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGND 385 (702)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~ 385 (702)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEe
Q 043420 386 DRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILA 465 (702)
Q Consensus 386 ~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~s 465 (702)
+.++.||++||. |||+|||++|++
T Consensus 213 ------------------------------------------------~~~~~fS~~G~~--------~di~APG~~i~s 236 (327)
T 2x8j_A 213 ------------------------------------------------LRLSDFTNTNEE--------IDIVAPGVGIKS 236 (327)
T ss_dssp ------------------------------------------------CCBSCC---CCC--------CSEEEECSSEEE
T ss_pred ------------------------------------------------CCCCCccCCCCC--------ceEecCcCceEe
Confidence 347899999985 499999999999
Q ss_pred eccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHh-----CCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCC
Q 043420 466 SWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSF-----YPSWSPAAIKSALMTTATPMSVEANSDAEFAYGS 540 (702)
Q Consensus 466 a~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~ 540 (702)
+++.. .|..++|||||||+|||++|||+|+ +|.|++.+||++|++||+++.. .+..+|+
T Consensus 237 ~~~~~-----------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-----~~~~~G~ 300 (327)
T 2x8j_A 237 TYLDS-----------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-----TAQAEGN 300 (327)
T ss_dssp ECSTT-----------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS-----CHHHHTT
T ss_pred ecCCC-----------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC-----CCCceee
Confidence 98754 6999999999999999999999999 9999999999999999998853 2678999
Q ss_pred CCcCccCcCCC
Q 043420 541 GHLNPSMAVNP 551 (702)
Q Consensus 541 G~in~~~Al~~ 551 (702)
|+||+.+|++.
T Consensus 301 G~vd~~~A~~~ 311 (327)
T 2x8j_A 301 GFLTLDLVERI 311 (327)
T ss_dssp CEECTTHHHHH
T ss_pred eEECHHHHHHh
Confidence 99999999874
No 17
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=2.4e-51 Score=434.43 Aligned_cols=277 Identities=22% Similarity=0.269 Sum_probs=224.7
Q ss_pred cccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCC
Q 043420 78 DFMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFK 157 (702)
Q Consensus 78 ~~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~ 157 (702)
++.|++++|+.+..++||+|||||||||++||+|.+. .+.+..++. ++ +..
T Consensus 6 ~i~G~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-----------------------~~~~~~~~~-~~-----~~~ 56 (306)
T 4h6w_A 6 NIPGLKKLWSETRGDPKICVAVLDGIVDQNHPCFIGA-----------------------DLTRLPSLV-SG-----EAN 56 (306)
T ss_dssp -CTTHHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-----------------------EEEECC--------------
T ss_pred CCcCHHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-----------------------cccCCCccc-CC-----CCC
Confidence 4568999999998789999999999999999999843 233333333 11 112
Q ss_pred CCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC--CCHHHHHHHHHHHHHCCCCEEEEee
Q 043420 158 SPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG--CADADILAAFDDAIADGVDIISISV 235 (702)
Q Consensus 158 ~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~gvdVIn~Sl 235 (702)
...|..||||||||||+|+... | +.||||+|+|+.+|++.+.+ +...+++++|+||++.+++|||+||
T Consensus 57 ~~~d~~gHGThVAGiiag~~~~-----~-----~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~ 126 (306)
T 4h6w_A 57 ANGSMSTHGTHVASIIFGQHDS-----P-----VTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSA 126 (306)
T ss_dssp --CCCCHHHHHHHHHHHCCTTS-----S-----SCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCCCCCCchHHHHHHHHccccC-----C-----cceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccc
Confidence 3346789999999999987421 2 38999999999999986543 7788899999999999999999999
Q ss_pred cCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeeccc
Q 043420 236 GSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTI 315 (702)
Q Consensus 236 G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~ 315 (702)
|...........+..++..+.++|++||++|||+|......+...+++|+|||++..
T Consensus 127 g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~----------------------- 183 (306)
T 4h6w_A 127 GQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ----------------------- 183 (306)
T ss_dssp CEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-----------------------
T ss_pred cccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-----------------------
Confidence 976333445566888888999999999999999998877777888999999987543
Q ss_pred CCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCc
Q 043420 316 DYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPL 395 (702)
Q Consensus 316 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~ 395 (702)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCC
Q 043420 396 PNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475 (702)
Q Consensus 396 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 475 (702)
+.++.||++|+. ..||||+|||++|+++++..
T Consensus 184 --------------------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~~----- 215 (306)
T 4h6w_A 184 --------------------------------------GKPVDFSNWGDA-----YQKQGILAPGKDILGAKPNG----- 215 (306)
T ss_dssp --------------------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEEEECTTS-----
T ss_pred --------------------------------------CCccccccccCC-----cCcceeecCCcCcccccCCC-----
Confidence 346788999864 35889999999999998764
Q ss_pred CCCCCCCceEeccccchhHHHHHHHHHHHHh----CCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCCC
Q 043420 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSF----YPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNP 551 (702)
Q Consensus 476 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~ 551 (702)
.|..++|||||||||||++|||+++ +|.|+|++||++|++||+++...+.. ....||+|+||+.+|++.
T Consensus 216 ------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~~-~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 216 ------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDTD-DQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp ------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTCS-CGGGGTTCBCCHHHHHHH
T ss_pred ------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCCC-CCCCcceeecCHHHHHHH
Confidence 6999999999999999999999865 59999999999999999998765433 246799999999999874
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.9e-51 Score=427.57 Aligned_cols=265 Identities=23% Similarity=0.243 Sum_probs=212.2
Q ss_pred CCCC-CCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCCChh
Q 043420 89 ATTE-SDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGT 167 (702)
Q Consensus 89 ~~~G-~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~gHGT 167 (702)
.++| +||+|||||||||++||+|.+. .+....+... .......|.+||||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~------------------------~~~~~~~~~~-----~~~~~d~~~~gHGT 53 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA------------------------DLTVLPTLAP-----TAARSDGFMSAHGT 53 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC------------------------EEEECCCSSC-----CCCCTTCHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC------------------------eeecCcCCCC-----CCCCCCCCCCCccc
Confidence 4678 6999999999999999999843 1222222201 11122234578999
Q ss_pred HHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC--CCHHHHHHHHHHHHHCCCCEEEEeecCCCCCCCcc
Q 043420 168 HTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG--CADADILAAFDDAIADGVDIISISVGSFSAVNYFE 245 (702)
Q Consensus 168 hVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~gvdVIn~SlG~~~~~~~~~ 245 (702)
||||||+|+... | +.||||+|+|+.+|++.+.+ ....+++++|+||++.+++|||||||.........
T Consensus 54 ~VAGiiag~~~~-----~-----~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~ 123 (282)
T 3zxy_A 54 HVASIIFGQPET-----S-----VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEAD 123 (282)
T ss_dssp HHHHHHHCCTTS-----S-----SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCC
T ss_pred ceeehhhccCCc-----e-----eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCcccccccccc
Confidence 999999987532 2 28999999999999986543 67888999999999999999999999763333445
Q ss_pred CHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccCCCCceeeEE
Q 043420 246 DTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLI 325 (702)
Q Consensus 246 ~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv 325 (702)
..+..++..+.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 124 ~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------------------------- 170 (282)
T 3zxy_A 124 GWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH--------------------------------- 170 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT---------------------------------
T ss_pred HHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC---------------------------------
Confidence 66788888999999999999999998877778888999999997543
Q ss_pred EcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcceEEecchhH
Q 043420 326 YGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDG 405 (702)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p~~~i~~~~~ 405 (702)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCCCCCCCceE
Q 043420 406 SKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRISPFNI 485 (702)
Q Consensus 406 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~y~~ 485 (702)
+.++.||++|+. ..||||+|||++|+++++.. .|..
T Consensus 171 ----------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~-----------~~~~ 206 (282)
T 3zxy_A 171 ----------------------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG-----------GTER 206 (282)
T ss_dssp ----------------------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS-----------CEEE
T ss_pred ----------------------------CccccccCCCCC-----ccccceeccCcceeeecCCC-----------ceee
Confidence 346889999875 35889999999999998764 6999
Q ss_pred eccccchhHHHHHHHHHHHHhC----CCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCC
Q 043420 486 ISGTSMSCPHATAAAAYVKSFY----PSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVN 550 (702)
Q Consensus 486 ~sGTSmAaP~VAG~aALl~q~~----P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~ 550 (702)
++|||||||||||++|||+|++ |.++|++||++|++||+++...... ....+|+|+||+.+|++
T Consensus 207 ~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~~~-~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 207 LSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDAPE-QARRCLAGRLNVSGAFT 274 (282)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------CGGGTTCBCCHHHHHH
T ss_pred cCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCCCC-ccCceeeeEeCHHHHHH
Confidence 9999999999999999999975 7899999999999999987654322 35689999999999986
No 19
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=6.7e-50 Score=424.02 Aligned_cols=280 Identities=29% Similarity=0.354 Sum_probs=224.2
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|+.+++|+||+|||||||||++||+|.+. +...++|..+.. .....
T Consensus 12 ~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~------------------------~~~~~~~~~~~~---~~~~~ 64 (310)
T 2ixt_A 12 AIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN------------------------VEQCKDFTGATT---PINNS 64 (310)
T ss_dssp HHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT------------------------EEEEEESSSSSS---CEETC
T ss_pred hcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc------------------------ccccccccCCCC---CCCCC
Confidence 366777999999999999999999999999999842 455566652110 01223
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCC-----CEEE
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGV-----DIIS 232 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gv-----dVIn 232 (702)
..|..||||||||||+|.... +..| +.||||+|+|+.+|++...+ +..++++++|+||++.++ +|||
T Consensus 65 ~~d~~gHGT~vAgiia~~~~~--n~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin 137 (310)
T 2ixt_A 65 CTDRNGHGTHVAGTALADGGS--DQAG-----IYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIIS 137 (310)
T ss_dssp CCCSSSHHHHHHHHHHCBCCT--TSCS-----CBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCHHHHHHHHhccCCC--CCCc-----eEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEE
Confidence 468899999999999987521 1112 28999999999999998776 688899999999999888 9999
Q ss_pred EeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCC--CCcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeE
Q 043420 233 ISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDA--ASLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGI 310 (702)
Q Consensus 233 ~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~ 310 (702)
||||... ....+..++.++.++|++||+||||+|... ...+...+++|+|||++....
T Consensus 138 ~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~---------------- 197 (310)
T 2ixt_A 138 MSLGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ---------------- 197 (310)
T ss_dssp ECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE----------------
T ss_pred EcCCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc----------------
Confidence 9999872 246678888889999999999999999763 345567799999999763200
Q ss_pred eecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCC
Q 043420 311 SINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVA 390 (702)
Q Consensus 311 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~ 390 (702)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCC--cccccCCCCCCCCC----CCCCCCcEEeCCCcEE
Q 043420 391 YSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAP--VVASFSSRGPNPIT----NDILKPDLTAPGVDIL 464 (702)
Q Consensus 391 ~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~--~~a~fSS~Gp~~~~----~~~lKPDI~APG~~I~ 464 (702)
.+ .++.||++||.... ..+.||||+|||++|+
T Consensus 198 ------------------------------------------~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~ 235 (310)
T 2ixt_A 198 ------------------------------------------NGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVY 235 (310)
T ss_dssp ------------------------------------------TTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEE
T ss_pred ------------------------------------------CCCeeeccccCCCCccCCccccccCCCeeEECCCCCEe
Confidence 01 46889999995311 1235999999999999
Q ss_pred eeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCC---C-CCccCCC
Q 043420 465 ASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANS---D-AEFAYGS 540 (702)
Q Consensus 465 sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~---~-~~~~~G~ 540 (702)
++++.. .|..++|||||||||||++|||+|++|+|++.+||++|++||+++...++. . .+..+||
T Consensus 236 s~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G~ 304 (310)
T 2ixt_A 236 STWYNG-----------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASGF 304 (310)
T ss_dssp EECTTS-----------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTBT
T ss_pred eecCCC-----------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCcccccCCcccccc
Confidence 998653 699999999999999999999999999999999999999999987643211 1 5678999
Q ss_pred CCcCc
Q 043420 541 GHLNP 545 (702)
Q Consensus 541 G~in~ 545 (702)
|++|+
T Consensus 305 G~~~v 309 (310)
T 2ixt_A 305 GFARV 309 (310)
T ss_dssp CBCCC
T ss_pred ceeec
Confidence 99986
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.8e-50 Score=428.32 Aligned_cols=268 Identities=26% Similarity=0.380 Sum_probs=223.3
Q ss_pred ccCchhhcccCCCCC--CcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTES--DIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDF 156 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~--gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~ 156 (702)
.++++.+|+.+ +|+ ||+|||||||||++||+|.+ ++....+|. ++... .+.
T Consensus 14 ~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~------------------------~~~~~~~~~-~~~~~-~~~ 66 (320)
T 2z30_A 14 RVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA------------------------NIAWCVSTL-RGKVS-TKL 66 (320)
T ss_dssp HTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG------------------------GEEEEEECG-GGCCB-CCH
T ss_pred hcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc------------------------ccccCcccc-CCccC-CCC
Confidence 47788899998 999 99999999999999999984 244455554 21110 001
Q ss_pred CCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC---------
Q 043420 157 KSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD--------- 226 (702)
Q Consensus 157 ~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--------- 226 (702)
....|..||||||||||+|.. + ..|+ .||||+|+|+.+|+++..+ +..++++++|+||++.
T Consensus 67 ~~~~d~~gHGT~vAgiia~~~-n---~~g~-----~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~ 137 (320)
T 2z30_A 67 RDCADQNGHGTHVIGTIAALN-N---DIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDG 137 (320)
T ss_dssp HHHBCSSSHHHHHHHHHHCCS-S---SBSC-----CCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTS
T ss_pred CCCCCCCCCHHHHHHHHHccc-C---CCce-----EeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccccccc
Confidence 123578999999999999973 1 1222 8999999999999998776 7888999999999987
Q ss_pred -----------CCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCcCCCCCceEEeeeeccCcce
Q 043420 227 -----------GVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASLANVAPWTLSVAASTVDRKF 295 (702)
Q Consensus 227 -----------gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~a~~vitVgA~~~~~~~ 295 (702)
+++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 138 ~~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--- 210 (320)
T 2z30_A 138 DGIIAGDPDDDAAEVISMSLGGPA----DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN--- 210 (320)
T ss_dssp SSCCTTCTTSCCCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---
T ss_pred ccccccccccCCceEEEecCCCCC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC---
Confidence 9999999999873 2456778888899999999999999998777778888999999997543
Q ss_pred eeEEEeCCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcC
Q 043420 296 VTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATAR 375 (702)
Q Consensus 296 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aG 375 (702)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCc
Q 043420 376 AVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPD 455 (702)
Q Consensus 376 a~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPD 455 (702)
+.++.||++|| +
T Consensus 211 ----------------------------------------------------------~~~~~~S~~g~----------~ 222 (320)
T 2z30_A 211 ----------------------------------------------------------DNIASFSNRQP----------E 222 (320)
T ss_dssp ----------------------------------------------------------SCBCTTSCSSC----------S
T ss_pred ----------------------------------------------------------CCcCcccCCCC----------C
Confidence 34688999997 7
Q ss_pred EEeCCCcEEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhC-------------CCCCHHHHHHHHHhc
Q 043420 456 LTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFY-------------PSWSPAAIKSALMTT 522 (702)
Q Consensus 456 I~APG~~I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------P~lsp~~ik~~L~~T 522 (702)
|+|||++|+++++.. .|..++|||||||||||++|||+|++ |.|++.+||++|++|
T Consensus 223 v~APG~~i~s~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~t 291 (320)
T 2z30_A 223 VSAPGVDILSTYPDD-----------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHIT 291 (320)
T ss_dssp EEEECSSEEEEETTT-----------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHH
T ss_pred EEeCCCCeEEeccCC-----------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhh
Confidence 899999999998753 68999999999999999999999999 999999999999999
Q ss_pred CcCCCCCCCCCCCccCCCCCcCccCcCCC
Q 043420 523 ATPMSVEANSDAEFAYGSGHLNPSMAVNP 551 (702)
Q Consensus 523 A~~~~~~~~~~~~~~~G~G~in~~~Al~~ 551 (702)
|+++...+ .+..||+|+||+.+|++.
T Consensus 292 a~~~~~~g---~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 292 ADDLGPTG---WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp SBCCSSSS---SBTTTBTCBCCHHHHHHH
T ss_pred CccCCCCC---CCCCcCCceeCHHHHHHH
Confidence 99886543 356899999999999864
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.8e-50 Score=435.04 Aligned_cols=274 Identities=22% Similarity=0.199 Sum_probs=223.2
Q ss_pred ccCchhhcccCCCCC--CcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTES--DIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDF 156 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~--gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~ 156 (702)
.++++.+|+. ++|+ ||+||||||||| +||+|.+ +++..++|..++. ....
T Consensus 29 ~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~------------------------~~~~~~~~~~~~~--~~~~ 80 (347)
T 2iy9_A 29 AIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD------------------------SEFAKFSFTQDGS--PFPV 80 (347)
T ss_dssp HHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT------------------------CEEEEEECBTTCC--SSCC
T ss_pred hCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc------------------------CcccCCcccCCCC--CCCC
Confidence 4678889998 8999 999999999999 9999974 2455666662221 0011
Q ss_pred CCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHHC------CCCE
Q 043420 157 KSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIAD------GVDI 230 (702)
Q Consensus 157 ~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~------gvdV 230 (702)
..+.|..||||||||||+|. .|+ .||||+|+|+.+|++...+.. ++++||+||+++ |++|
T Consensus 81 ~~~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~~V 146 (347)
T 2iy9_A 81 KKSEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEEKI 146 (347)
T ss_dssp SSSHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEEEE
T ss_pred CCCCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCceE
Confidence 24557889999999999987 132 899999999999998775443 999999999999 9999
Q ss_pred EEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCC-------CCCcCCCCC----------ceEEeeeecc--
Q 043420 231 ISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPD-------AASLANVAP----------WTLSVAASTV-- 291 (702)
Q Consensus 231 In~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~a~----------~vitVgA~~~-- 291 (702)
||||||... .......+..++..+.++|++||+||||+|.. ...++...+ ++|+|||++.
T Consensus 147 in~S~G~~~-~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~ 225 (347)
T 2iy9_A 147 INISGGQKG-VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYR 225 (347)
T ss_dssp EEESSCBCC-C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCC
T ss_pred EEeccccCC-CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCC
Confidence 999999762 23456778888899999999999999999975 345556677 9999999765
Q ss_pred CcceeeEEEeCCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhh
Q 043420 292 DRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGA 371 (702)
Q Consensus 292 ~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~ 371 (702)
+....
T Consensus 226 ~g~~~--------------------------------------------------------------------------- 230 (347)
T 2iy9_A 226 KGETP--------------------------------------------------------------------------- 230 (347)
T ss_dssp TTSCC---------------------------------------------------------------------------
T ss_pred CCcee---------------------------------------------------------------------------
Confidence 21000
Q ss_pred hhcCceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCC
Q 043420 372 ATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDI 451 (702)
Q Consensus 372 ~~aGa~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~ 451 (702)
.....++.||++||+
T Consensus 231 -----------------------------------------------------------~~~~~~~~fS~~G~~------ 245 (347)
T 2iy9_A 231 -----------------------------------------------------------VLHGGGITGSRFGNN------ 245 (347)
T ss_dssp -----------------------------------------------------------CBCCCSSSCBCBCTT------
T ss_pred -----------------------------------------------------------cccCCCCCCCCCCCC------
Confidence 001235799999995
Q ss_pred CCCcEEeCCCcEEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCC
Q 043420 452 LKPDLTAPGVDILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEAN 531 (702)
Q Consensus 452 lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~ 531 (702)
||||+|||++|+++++.. .|..++|||||||||||++|||+|++|+|++.+||++|++||+++....
T Consensus 246 -~~di~APG~~i~s~~~~~-----------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~- 312 (347)
T 2iy9_A 246 -WVDIAAPGQNITFLRPDA-----------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV- 312 (347)
T ss_dssp -TCSEEEECSSEEEECTTS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT-
T ss_pred -CCEEEeCCCCeEeecCCC-----------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC-
Confidence 679999999999998754 6999999999999999999999999999999999999999999887653
Q ss_pred CCCCccCCCCCcCccCcCCC
Q 043420 532 SDAEFAYGSGHLNPSMAVNP 551 (702)
Q Consensus 532 ~~~~~~~G~G~in~~~Al~~ 551 (702)
+..+|+|+||+.+|++.
T Consensus 313 ---~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 313 ---DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp ---TTSGGGEECCHHHHHHH
T ss_pred ---CccccCCEecHHHHHHH
Confidence 46899999999999985
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=4.4e-50 Score=431.05 Aligned_cols=299 Identities=25% Similarity=0.320 Sum_probs=224.6
Q ss_pred cCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccC----CCCcccCceeEeeeecccCCCC--CC
Q 043420 80 MGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQT----SSNFTCNNKIIGAKFYRSDKKF--SP 153 (702)
Q Consensus 80 ~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~----~~~~~~n~kiig~~~~~~~~~~--~~ 153 (702)
++++.+|+.+++|+||+||||||||+ +||+|.+.-. ..|+-.... ..+.......-...++. .... .+
T Consensus 19 i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~ 92 (340)
T 3lpc_A 19 VKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYDFISNSQISLDGDGRDADPFDEGDWFD-NWACGGRP 92 (340)
T ss_dssp CCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEECCCCHHHHCSSSSSBSCCBCCCCCBC-TTTTSCTT
T ss_pred CCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCccccCCccccccCCCccCCccccccccc-cccccCCC
Confidence 78888999999999999999999998 9999975311 111110000 00000000000000000 0000 00
Q ss_pred CCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHH--------
Q 043420 154 FDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIA-------- 225 (702)
Q Consensus 154 ~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-------- 225 (702)
.......|..||||||||||+|...++. |+ .||||+|+|+.+|++...++..++++++|+||++
T Consensus 93 ~~~~~~~d~~gHGT~vAgiia~~~~~~~---g~-----~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~ 164 (340)
T 3lpc_A 93 DPRKERSDSSWHGSHVAGTIAAVTNNRI---GV-----AGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPE 164 (340)
T ss_dssp CGGGSCBCCCCHHHHHHHHHHCCCSSSS---SC-----CCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCC
T ss_pred CcccCCCCCCCCHHHHHHHHHccCCCCC---cc-----eeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccccccc
Confidence 1122356889999999999999864322 22 8999999999999998877889999999999998
Q ss_pred --CCCCEEEEeecCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCC-CcCCCCCceEEeeeeccCcceeeEEEeC
Q 043420 226 --DGVDIISISVGSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAA-SLANVAPWTLSVAASTVDRKFVTRVKLG 302 (702)
Q Consensus 226 --~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~a~~vitVgA~~~~~~~~~~~~~~ 302 (702)
.+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 165 ~~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------- 231 (340)
T 3lpc_A 165 NRNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR---------- 231 (340)
T ss_dssp CSSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT----------
T ss_pred ccCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC----------
Confidence 89999999999862 23455777888899999999999999987643 356678999999997543
Q ss_pred CCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEe
Q 043420 303 NGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQ 382 (702)
Q Consensus 303 ~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~ 382 (702)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCc
Q 043420 383 GNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVD 462 (702)
Q Consensus 383 ~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~ 462 (702)
+.++.||++|| ||||+|||++
T Consensus 232 ---------------------------------------------------~~~~~~S~~g~--------~~di~ApG~~ 252 (340)
T 3lpc_A 232 ---------------------------------------------------GIRASFSNYGV--------DVDLAAPGQD 252 (340)
T ss_dssp ---------------------------------------------------SSBCTTCCBST--------TCCEEEECSS
T ss_pred ---------------------------------------------------CCcCCCCCCCC--------CceEEecCCC
Confidence 35789999997 4599999999
Q ss_pred EEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHh-C---CCCCHHHHHHHHHhcCcCCCCCCCCCCCccC
Q 043420 463 ILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSF-Y---PSWSPAAIKSALMTTATPMSVEANSDAEFAY 538 (702)
Q Consensus 463 I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~ 538 (702)
|+++++.... ......|..++|||||||||||++|||+|+ + |.|++++||++|++||+++... .+..+
T Consensus 253 i~s~~~~~~~----~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~~----~~~~~ 324 (340)
T 3lpc_A 253 ILSTVDSGTR----RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGR----LDRAL 324 (340)
T ss_dssp EEEEEESCSS----SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSSC----CSSCC
T ss_pred eecccCCCCc----CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCCC----CCCCc
Confidence 9999876531 112235899999999999999999999998 5 9999999999999999988643 35689
Q ss_pred CCCCcCccCcCCCc
Q 043420 539 GSGHLNPSMAVNPG 552 (702)
Q Consensus 539 G~G~in~~~Al~~g 552 (702)
|+|+||+.+||+..
T Consensus 325 G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 325 GSGIVDAEAAVNSV 338 (340)
T ss_dssp CSSBCCHHHHHHHH
T ss_pred ccceecHHHHHHHH
Confidence 99999999998753
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=2.9e-49 Score=438.07 Aligned_cols=297 Identities=24% Similarity=0.284 Sum_probs=232.1
Q ss_pred ccccCchhhcc-cCCCCCCcEEEEeccCCCC------CCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCC
Q 043420 77 WDFMGFSEHVK-RATTESDIIVGMLDTGIWP------ESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDK 149 (702)
Q Consensus 77 ~~~~g~~~~w~-~~~~G~gV~VgVIDtGid~------~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~ 149 (702)
.+.++++.+|+ .+++|+||+|||||||||+ .||+|.+ +++..++|. +
T Consensus 5 ~~~i~~~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~------------------------~i~~~~~~~-~- 58 (434)
T 1wmd_A 5 RGIVKADVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG------------------------KITALYALG-R- 58 (434)
T ss_dssp HHHTTHHHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT------------------------CEEEEEETT-T-
T ss_pred hhhhCchhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC------------------------CEeeecccc-C-
Confidence 45789999998 7999999999999999999 7999973 355556665 2
Q ss_pred CCCCCCCCCCCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCC---CHHHHHHHHHHHHHC
Q 043420 150 KFSPFDFKSPRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGC---ADADILAAFDDAIAD 226 (702)
Q Consensus 150 ~~~~~~~~~~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~A~~~ 226 (702)
...+.|..||||||||||+|++. + +.||||+|+|+.+|++...+. ..+++.++|++|++.
T Consensus 59 ------~~~~~d~~gHGT~VAgiiag~g~------~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~ 121 (434)
T 1wmd_A 59 ------TNNANDTNGHGTHVAGSVLGNGS------T-----NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSA 121 (434)
T ss_dssp ------TTCCCCSSSHHHHHHHHHHCCSS------S-----SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHT
T ss_pred ------CCCCCCCCCcHHHHHHHHHcCCC------C-----ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhc
Confidence 12466889999999999998642 1 379999999999999987653 456799999999999
Q ss_pred CCCEEEEeecCCCCCCCccCHHHHHHHHH-HhCCCEEEEccCCCCCCCC--CcCCCCCceEEeeeeccCcceeeEEEeCC
Q 043420 227 GVDIISISVGSFSAVNYFEDTIAIGSFHA-MKKGILTSNSAGNSGPDAA--SLANVAPWTLSVAASTVDRKFVTRVKLGN 303 (702)
Q Consensus 227 gvdVIn~SlG~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~G~~~~--~~~~~a~~vitVgA~~~~~~~~~~~~~~~ 303 (702)
|++|||||||..... ..++...+++++ .++|++||+||||+|.... ..+..++++|+|||++..+...
T Consensus 122 g~~Vin~S~G~~~~~--~~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~------- 192 (434)
T 1wmd_A 122 GARIHTNSWGAAVNG--AYTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF------- 192 (434)
T ss_dssp TCSEEEECCCBCCTT--CCCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-------
T ss_pred CCeEEEecCCCCcCC--cCCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-------
Confidence 999999999987322 224556666666 5899999999999997643 3456789999999987542100
Q ss_pred CeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEee
Q 043420 304 GEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQG 383 (702)
Q Consensus 304 g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~ 383 (702)
+.
T Consensus 193 ---------------~~--------------------------------------------------------------- 194 (434)
T 1wmd_A 193 ---------------GS--------------------------------------------------------------- 194 (434)
T ss_dssp ---------------CG---------------------------------------------------------------
T ss_pred ---------------Cc---------------------------------------------------------------
Confidence 00
Q ss_pred CCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcE
Q 043420 384 NDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDI 463 (702)
Q Consensus 384 ~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I 463 (702)
.....+.++.||++||+. ++++||||+|||++|
T Consensus 195 ---------------------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i 227 (434)
T 1wmd_A 195 ---------------------------------------------YADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFI 227 (434)
T ss_dssp ---------------------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSE
T ss_pred ---------------------------------------------ccCCCCccccccCCCCCC--CCCCCceEEcCCCCe
Confidence 001125689999999998 899999999999999
Q ss_pred EeeccCCCCCCC-CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCC-----CHHHHHHHHHhcCcCCCCCCCCCCCcc
Q 043420 464 LASWTQASSPSE-GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSW-----SPAAIKSALMTTATPMSVEANSDAEFA 537 (702)
Q Consensus 464 ~sa~~~~~~~~~-~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~l-----sp~~ik~~L~~TA~~~~~~~~~~~~~~ 537 (702)
+++++....... .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.... .+..
T Consensus 228 ~s~~~~~~~~~~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~~~---~~~~ 304 (434)
T 1wmd_A 228 LSARSSLAPDSSFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLGY---PNGN 304 (434)
T ss_dssp EEECCTTCCGGGSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSCS---SCTT
T ss_pred EecCCCCCCCcccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCCCC---CCcc
Confidence 999864311000 00012479999999999999999999999999875 89999999999999864321 3678
Q ss_pred CCCCCcCccCcCCCce
Q 043420 538 YGSGHLNPSMAVNPGL 553 (702)
Q Consensus 538 ~G~G~in~~~Al~~gl 553 (702)
||||+||+.+|++..+
T Consensus 305 ~G~G~vd~~~a~~~~~ 320 (434)
T 1wmd_A 305 QGWGRVTLDKSLNVAY 320 (434)
T ss_dssp TTTCBCCHHHHHTCEE
T ss_pred CCcCeEeHHHhcccce
Confidence 9999999999997643
No 24
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=2.5e-48 Score=461.21 Aligned_cols=408 Identities=21% Similarity=0.201 Sum_probs=268.4
Q ss_pred CcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCCChhHHHHHh
Q 043420 94 DIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEGHGTHTSSTA 173 (702)
Q Consensus 94 gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~gHGThVAgia 173 (702)
+|+|||||||++.+|++... ...|+...+.+ .| .+.+-+..++..++ .......|++||||||||||
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~------l~~Y~~~~dyg-~F--~D~v~~~~n~~Ddg----d~~~~v~D~~GHGThVAGII 280 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALR------IGEYSRTHETR-NV--DDFLSISVNVHDEG----NVLEVVGMSSPHGTHVSSIA 280 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEE------EECTTTTCCCC-EE--SSSCEEEEEEEGGG----TEEEEEECCCHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCCcccccc------ccccccccccc-cc--ccccCCCCccCCCC----CccccCCCCCCcHHHHHHHH
Confidence 69999999999876655421 01111111100 00 11222222332111 00111247899999999999
Q ss_pred ccCCCCCCcccccccceeeecccCCeEEEEEEecCCC---CCHHHHHHHHHHHHH-----CCCCEEEEeecCCCCCCCcc
Q 043420 174 AGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG---CADADILAAFDDAIA-----DGVDIISISVGSFSAVNYFE 245 (702)
Q Consensus 174 aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~A~~-----~gvdVIn~SlG~~~~~~~~~ 245 (702)
||.. ++. |+ .||||+|+|+.+|+++..+ +...+++.+|.+|++ .|++|||||||... .....
T Consensus 281 Aa~~-N~~---g~-----~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~-~~~~~ 350 (1354)
T 3lxu_X 281 SGNH-SSR---DV-----DGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHA-NWSNS 350 (1354)
T ss_dssp CCCC-SSS---SS-----CCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCC-SCSSC
T ss_pred hcCC-CCC---Cc-----eeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCC-CCCcc
Confidence 9986 222 22 8999999999999987643 356778888888887 79999999999983 22345
Q ss_pred CHHHHHHHHHH-hCCCEEEEccCCCCCCCCCc--CC--CCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccCCCCc
Q 043420 246 DTIAIGSFHAM-KKGILTSNSAGNSGPDAASL--AN--VAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTIDYKGK 320 (702)
Q Consensus 246 ~~~~~a~~~a~-~~Gi~vV~AAGN~G~~~~~~--~~--~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 320 (702)
+.+..++.++. ++|++||+||||+|....++ +. .++++|+|||++...........
T Consensus 351 ~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------------------- 411 (1354)
T 3lxu_X 351 GRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------------------- 411 (1354)
T ss_dssp CHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----------------------
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-------------------
Confidence 67788888886 89999999999999865443 33 37999999998654211000000
Q ss_pred eeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcceEEe
Q 043420 321 MFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLPNSYL 400 (702)
Q Consensus 321 ~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p~~~i 400 (702)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCCCCCC
Q 043420 401 DLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEGDPRI 480 (702)
Q Consensus 401 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~ 480 (702)
.....+.++.|||+||+. ++++||||+|||++|.++.....
T Consensus 412 ----------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~--------- 452 (1354)
T 3lxu_X 412 ----------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM--------- 452 (1354)
T ss_dssp ----------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC--------------------
T ss_pred ----------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC---------
Confidence 001125689999999998 89999999999999998754321
Q ss_pred CCceEeccccchhHHHHHHHHHHHH----hCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCccCcCCCceeee
Q 043420 481 SPFNIISGTSMSCPHATAAAAYVKS----FYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPSMAVNPGLVYD 556 (702)
Q Consensus 481 ~~y~~~sGTSmAaP~VAG~aALl~q----~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~~Al~~glv~~ 556 (702)
..|..++|||||||||||++|||++ .+|+|++++||++|++||+++... .++.||+|+||+.+|++..+.|+
T Consensus 453 ~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~----~~~~~G~GlLDa~~AV~~a~~~~ 528 (1354)
T 3lxu_X 453 SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYV----DPFAQGHGLLNVEKAFEHLTEHR 528 (1354)
T ss_dssp ----CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTS----CTTTSSSSBCCHHHHHHHHHTTT
T ss_pred CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCC----CcccccCCEeCHHHHHHHHHhcC
Confidence 3688999999999999999999986 799999999999999999998765 36789999999999999999999
Q ss_pred CCchhhHhhhhcCCCCCCcceeecCCCccccCCCCCCccCCCCCeEEEecCCCCCccEEEEEEEE----ecC---CC-Ce
Q 043420 557 AGELDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALSTKPGNNTTQVFHRTVT----NVG---SA-VS 628 (702)
Q Consensus 557 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~t~~rtvt----nvg---~~-~~ 628 (702)
....+|+.|+|..++.... .++.+.. .| ....+++.+|+ |.. +. ..
T Consensus 529 ~~p~~~v~f~~~v~~~~~r-gIylR~~-~~------------------------~~~~~~tv~V~p~f~~~~~~~~~~~i 582 (1354)
T 3lxu_X 529 QSKDNMLRFSVRVGNNADK-GIHLRQG-VQ------------------------RNSIDYNVYIEPIFYNDKEADPKDKF 582 (1354)
T ss_dssp TCGGGGEEEEEEETTTTBS-SEEECSS-CC------------------------CSCEEEEEEEEEEESSCSCSSSTTCS
T ss_pred CCCccceEEEEEecCCCCC-ceEEecc-cc------------------------CCceEEEEEEeeeecCcccCChhhcc
Confidence 9999999999998754332 1222111 01 01233333332 111 11 11
Q ss_pred eE--EEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEEEEEEEC-----CCceEEeEEEEEec
Q 043420 629 TY--RAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWDD-----GVHHVRSPVVAFVA 697 (702)
Q Consensus 629 ty--~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~~~~~~-----~~~~v~~P~~~~~~ 697 (702)
.| ++.+.... --|++ |+.|.+ .++.++|.|.|+.... ..+.++++|..-| .+...|+||-|...
T Consensus 583 ~f~~~l~L~~t~-~wv~~-p~~l~l--~~~~r~~~v~vDp~~L-~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 583 NFNVRLNLIASQ-PWVQC-GAFLDL--SYGTRSIAVRVDPTGL-QPGVHSAVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp CCCCEEEEEESS-TTEEE-CSCEEC--TTSCEEEEEEECGGGC-CSEEEEEEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred ceEEEEEEecCC-Cceec-ccceee--cCCCceEEEEECCCCC-CCcceeEEEEEEEcCCcccCceEEeeEEEEee
Confidence 12 22222211 12333 888777 5677889999987654 4467889998754 35899999988754
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=8.6e-48 Score=401.47 Aligned_cols=240 Identities=23% Similarity=0.345 Sum_probs=205.4
Q ss_pred cCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCC
Q 043420 80 MGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSP 159 (702)
Q Consensus 80 ~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 159 (702)
+.+..+|..+++|+||+|+|||||||++||+|.+. ++..++|. +. ...+
T Consensus 16 ~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~-~~------~~~~ 64 (284)
T 1sh7_A 16 LPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR------------------------SVSGYDFV-DN------DADS 64 (284)
T ss_dssp SSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC------------------------EEEEEETT-TT------BSCC
T ss_pred cCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC------------------------cccccccc-CC------CCCC
Confidence 35566899999999999999999999999999842 45556666 21 1245
Q ss_pred CCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC--CCCEEEEeec
Q 043420 160 RDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD--GVDIISISVG 236 (702)
Q Consensus 160 ~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--gvdVIn~SlG 236 (702)
.|..+|||||||||+|.. .||||+|+|+.+|++...+ +..+++++||+|+++. +++|||||||
T Consensus 65 ~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G 130 (284)
T 1sh7_A 65 SDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLG 130 (284)
T ss_dssp CCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCC
T ss_pred CCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCC
Confidence 688999999999999873 6999999999999998766 7888999999999984 7999999999
Q ss_pred CCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCC-CcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeeccc
Q 043420 237 SFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAA-SLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTI 315 (702)
Q Consensus 237 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~ 315 (702)
.. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 131 ~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 182 (284)
T 1sh7_A 131 GG-----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS----------------------- 182 (284)
T ss_dssp BS-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-----------------------
T ss_pred CC-----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-----------------------
Confidence 87 2367888888999999999999999987542 445678999999997543
Q ss_pred CCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCc
Q 043420 316 DYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPL 395 (702)
Q Consensus 316 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~ 395 (702)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCC
Q 043420 396 PNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475 (702)
Q Consensus 396 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 475 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 183 --------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~----- 211 (284)
T 1sh7_A 183 --------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYDG----- 211 (284)
T ss_dssp --------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-----
T ss_pred --------------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCCC-----
Confidence 3468999999975 9999999999988653
Q ss_pred CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCC
Q 043420 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVE 529 (702)
Q Consensus 476 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~ 529 (702)
.|..++|||||||||||++|||+|++|+|++++||++|++||++....
T Consensus 212 ------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 259 (284)
T 1sh7_A 212 ------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKVS 259 (284)
T ss_dssp ------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred ------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCcc
Confidence 699999999999999999999999999999999999999999876544
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.9e-47 Score=398.21 Aligned_cols=242 Identities=26% Similarity=0.347 Sum_probs=204.7
Q ss_pred cCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCC
Q 043420 80 MGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSP 159 (702)
Q Consensus 80 ~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 159 (702)
+.+..+|..+++|+||+|+|||||||++||+|.+. +...++|. ++ ...+
T Consensus 18 ~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~------------------------~~~~~d~~-~~------~~~~ 66 (278)
T 2b6n_A 18 LPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR------------------------ASSGYDFI-DN------DYDA 66 (278)
T ss_dssp SSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC------------------------EEEEEETT-TT------BSCC
T ss_pred CCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcc------------------------cccCeecC-CC------CCCC
Confidence 34566899999999999999999999999999842 44556666 21 1245
Q ss_pred CCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHH--CCCCEEEEeec
Q 043420 160 RDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIA--DGVDIISISVG 236 (702)
Q Consensus 160 ~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~--~gvdVIn~SlG 236 (702)
.|..+|||||||||+|.. .||||+|+|+.+|++++.+ +..++++++|+|+++ .|++|||||||
T Consensus 67 ~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G 132 (278)
T 2b6n_A 67 TDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLG 132 (278)
T ss_dssp CCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCC
T ss_pred CCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCC
Confidence 688999999999999863 6999999999999998766 788899999999998 59999999999
Q ss_pred CCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCC-CcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeeccc
Q 043420 237 SFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAA-SLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTI 315 (702)
Q Consensus 237 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~ 315 (702)
... ...+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 133 ~~~-----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 184 (278)
T 2b6n_A 133 GGA-----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN----------------------- 184 (278)
T ss_dssp EEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------
T ss_pred CCc-----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-----------------------
Confidence 872 366788888899999999999999997643 345678999999987543
Q ss_pred CCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCc
Q 043420 316 DYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPL 395 (702)
Q Consensus 316 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~ 395 (702)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCC
Q 043420 396 PNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475 (702)
Q Consensus 396 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 475 (702)
+.++.||++||.. ||+|||++|++++....
T Consensus 185 --------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~---- 214 (278)
T 2b6n_A 185 --------------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN---- 214 (278)
T ss_dssp --------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTST----
T ss_pred --------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCCC----
Confidence 3468899999854 99999999999886431
Q ss_pred CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCC
Q 043420 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVE 529 (702)
Q Consensus 476 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~ 529 (702)
..|..++|||||||||||++|||+|++|+|++++||++|++||++....
T Consensus 215 -----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 263 (278)
T 2b6n_A 215 -----SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADKVT 263 (278)
T ss_dssp -----TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred -----CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcC
Confidence 3689999999999999999999999999999999999999999875433
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=2.1e-47 Score=398.00 Aligned_cols=241 Identities=24% Similarity=0.337 Sum_probs=207.5
Q ss_pred cCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCC
Q 043420 80 MGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSP 159 (702)
Q Consensus 80 ~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 159 (702)
+++..+|..+++|+||+|+|||||||++||+|.+. +...++|. ...+
T Consensus 18 ~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~---------~~~~ 64 (276)
T 4dzt_A 18 LPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR------------------------ARVGYDAL---------GGNG 64 (276)
T ss_dssp SSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC------------------------EEEEEETT---------SSCS
T ss_pred CCcccceecCCCCCCcEEEEEccCCCCCChhHccC------------------------eeccccCC---------CCCC
Confidence 55667899999999999999999999999999742 44555565 1345
Q ss_pred CCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC--CCCEEEEeec
Q 043420 160 RDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD--GVDIISISVG 236 (702)
Q Consensus 160 ~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--gvdVIn~SlG 236 (702)
.|..||||||||||+|.. .||||+|+|+.+|++...+ ...++++++|+|+++. +++|||||||
T Consensus 65 ~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g 130 (276)
T 4dzt_A 65 QDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLG 130 (276)
T ss_dssp CCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCC
T ss_pred CCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCC
Confidence 688999999999999873 6999999999999998776 7889999999999997 8999999999
Q ss_pred CCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCc-CCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeeccc
Q 043420 237 SFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASL-ANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTI 315 (702)
Q Consensus 237 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~ 315 (702)
... ...+..++.++.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 131 ~~~-----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 182 (276)
T 4dzt_A 131 GGV-----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS----------------------- 182 (276)
T ss_dssp EEC-----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------
T ss_pred CCC-----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-----------------------
Confidence 762 46788888899999999999999999765433 5678999999987543
Q ss_pred CCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCc
Q 043420 316 DYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPL 395 (702)
Q Consensus 316 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~ 395 (702)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCC
Q 043420 396 PNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475 (702)
Q Consensus 396 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 475 (702)
+.++.||++||.. ||+|||++|.+++....
T Consensus 183 --------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~---- 212 (276)
T 4dzt_A 183 --------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTSD---- 212 (276)
T ss_dssp --------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTSS----
T ss_pred --------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCCC----
Confidence 3578999999976 99999999999986542
Q ss_pred CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCC
Q 043420 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEA 530 (702)
Q Consensus 476 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~ 530 (702)
..|..++|||||||+|||++|||+|++|+|++++||++|++||++....+
T Consensus 213 -----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 262 (276)
T 4dzt_A 213 -----TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLSG 262 (276)
T ss_dssp -----SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCBS
T ss_pred -----CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccCC
Confidence 36899999999999999999999999999999999999999999876543
No 28
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1e-47 Score=441.68 Aligned_cols=291 Identities=21% Similarity=0.201 Sum_probs=205.9
Q ss_pred cCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCC
Q 043420 80 MGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSP 159 (702)
Q Consensus 80 ~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 159 (702)
+++..+|..+++|+||+|||||||||++||+|.+. ...+.++|. ++. ....|
T Consensus 57 in~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-----------------------~~~~~~~~~-~~~----~d~~p 108 (600)
T 2oxa_A 57 LNLWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-----------------------VRPGSKNVV-TGS----DDPTP 108 (600)
T ss_dssp CCCHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-----------------------BCSCCBCTT-TCS----SCCCC
T ss_pred cChHHHHhcCCCCCCcEEEEecCCcCCCCcchhhc-----------------------cccCceecc-CCC----CCCCC
Confidence 67888999999999999999999999999999843 111233444 211 11234
Q ss_pred CC-CCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCC-H-HHHHHHHHHHHHCCCCEEEEeec
Q 043420 160 RD-SEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCA-D-ADILAAFDDAIADGVDIISISVG 236 (702)
Q Consensus 160 ~D-~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~-~-~~i~~ai~~A~~~gvdVIn~SlG 236 (702)
.| ..||||||||||||. .++. |+ .||||+|+|+.+|+++..+.. . ..+++....+..++++|||||||
T Consensus 109 ~d~~~gHGT~vAGiiaa~-~n~~---g~-----~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G 179 (600)
T 2oxa_A 109 TDPDTGHGTSVSGIIAAV-DNAI---GT-----KGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYR 179 (600)
T ss_dssp CSTTCCHHHHHHHHHHCC-SSSS---SC-----CCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCC
T ss_pred CCCCCCCccHHHHHhhcc-cCCC---cc-----eEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEecc
Confidence 44 789999999999998 3222 22 899999999999999887633 2 33444444477889999999999
Q ss_pred CCCCCCCccCH----HHHHHHH---HHhCCCEEEEccCCCCCCCC----------------------CcCCCCCceEEee
Q 043420 237 SFSAVNYFEDT----IAIGSFH---AMKKGILTSNSAGNSGPDAA----------------------SLANVAPWTLSVA 287 (702)
Q Consensus 237 ~~~~~~~~~~~----~~~a~~~---a~~~Gi~vV~AAGN~G~~~~----------------------~~~~~a~~vitVg 287 (702)
.........+. +..++.. +.++|++||+||||+|.... ...+.++|+|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVg 259 (600)
T 2oxa_A 180 MSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVS 259 (600)
T ss_dssp CCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEE
T ss_pred CCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEe
Confidence 87322222222 2222222 44789999999999986321 1112345677777
Q ss_pred eeccCcceeeEEEeCCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecch
Q 043420 288 ASTVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELND 367 (702)
Q Consensus 288 A~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~ 367 (702)
|++.+
T Consensus 260 A~~~~--------------------------------------------------------------------------- 264 (600)
T 2oxa_A 260 ALNAD--------------------------------------------------------------------------- 264 (600)
T ss_dssp EECTT---------------------------------------------------------------------------
T ss_pred cccCC---------------------------------------------------------------------------
Confidence 65432
Q ss_pred hhhhhhcCceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCC
Q 043420 368 GFGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPI 447 (702)
Q Consensus 368 ~~~~~~aGa~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~ 447 (702)
+.++.||++||+.
T Consensus 265 ------------------------------------------------------------------g~~a~fS~~G~~v- 277 (600)
T 2oxa_A 265 ------------------------------------------------------------------GVRSSYSSVGSNI- 277 (600)
T ss_dssp ------------------------------------------------------------------SSBCTTCCBCTTE-
T ss_pred ------------------------------------------------------------------CCcCCcCCCCCCe-
Confidence 4578999999987
Q ss_pred CCCCCCCcEEeCCCcEEeeccC-------CCCCC---------------C-CCCCCCCceEeccccchhHHHHHHHHHHH
Q 043420 448 TNDILKPDLTAPGVDILASWTQ-------ASSPS---------------E-GDPRISPFNIISGTSMSCPHATAAAAYVK 504 (702)
Q Consensus 448 ~~~~lKPDI~APG~~I~sa~~~-------~~~~~---------------~-~~~~~~~y~~~sGTSmAaP~VAG~aALl~ 504 (702)
||+|||++|.+..+. ..... . .+.....|..++|||||||||||+||||+
T Consensus 278 -------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~ 350 (600)
T 2oxa_A 278 -------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLM 350 (600)
T ss_dssp -------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHH
T ss_pred -------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHH
Confidence 999999986443221 10000 0 01112338899999999999999999999
Q ss_pred HhCCCCCHHHHHHHHHhcCcCCCCCCCC---------------------------C-CCccCCCCCcCccCcCCCceeee
Q 043420 505 SFYPSWSPAAIKSALMTTATPMSVEANS---------------------------D-AEFAYGSGHLNPSMAVNPGLVYD 556 (702)
Q Consensus 505 q~~P~lsp~~ik~~L~~TA~~~~~~~~~---------------------------~-~~~~~G~G~in~~~Al~~glv~~ 556 (702)
|++|+|+|++||++|++||+++...... . .++.||||+||+.+|++....+.
T Consensus 351 s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 351 SAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp HHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTCC
T ss_pred HhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhcc
Confidence 9999999999999999999987644210 0 24689999999999998654433
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=6.8e-47 Score=393.66 Aligned_cols=240 Identities=27% Similarity=0.333 Sum_probs=204.4
Q ss_pred hcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCC
Q 043420 85 HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEG 164 (702)
Q Consensus 85 ~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~g 164 (702)
.|+ ..+|+||+|+|||||||++||+|.+. +...++|. ..+.|..+
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~------------------------~~~~~~~~----------~~~~d~~g 68 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR------------------------AQMVKTYY----------YSSRDGNG 68 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC------------------------EEEEEESS----------SCSSCSSS
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc------------------------cccccCCC----------CCCCCCCC
Confidence 444 37999999999999999999999842 44455554 13567899
Q ss_pred ChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCCC-------CEEEEeec
Q 043420 165 HGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADGV-------DIISISVG 236 (702)
Q Consensus 165 HGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gv-------dVIn~SlG 236 (702)
|||||||||+|+. .||||+|+|+.+|+++..+ +..++++++|+|++++++ +|||||||
T Consensus 69 HGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G 134 (279)
T 2pwa_A 69 HGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLG 134 (279)
T ss_dssp HHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCC
T ss_pred CHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCC
Confidence 9999999999873 6999999999999998876 788999999999999887 99999999
Q ss_pred CCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCC-CcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeeccc
Q 043420 237 SFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAA-SLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTI 315 (702)
Q Consensus 237 ~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~ 315 (702)
.. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+
T Consensus 135 ~~-----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------- 186 (279)
T 2pwa_A 135 GG-----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY----------------------- 186 (279)
T ss_dssp EE-----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------
T ss_pred CC-----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC-----------------------
Confidence 76 2467888888999999999999999997643 346678999999997643
Q ss_pred CCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCc
Q 043420 316 DYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPL 395 (702)
Q Consensus 316 ~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~ 395 (702)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCC
Q 043420 396 PNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSE 475 (702)
Q Consensus 396 p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~ 475 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 187 --------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~----- 215 (279)
T 2pwa_A 187 --------------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIGG----- 215 (279)
T ss_dssp --------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETTT-----
T ss_pred --------------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeecCC-----
Confidence 3578999999965 9999999999998764
Q ss_pred CCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCCCCCccCCCCCcCcc
Q 043420 476 GDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANSDAEFAYGSGHLNPS 546 (702)
Q Consensus 476 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~~~~~~~G~G~in~~ 546 (702)
.|..++|||||||||||++|||+|+ |++++.+||++|++||++.... .+|+|..|+.
T Consensus 216 ------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~~-------~~~~g~~n~l 272 (279)
T 2pwa_A 216 ------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDLS-------NIPFGTVNLL 272 (279)
T ss_dssp ------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCCB-------SCCTTSCCEE
T ss_pred ------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccccC-------CCCCCCccEe
Confidence 6899999999999999999999999 9999999999999999886543 3677877763
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=4.4e-47 Score=424.20 Aligned_cols=288 Identities=18% Similarity=0.132 Sum_probs=217.9
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.++++.+|+.+++|+||+|||||||||++||+|.+.-. ....++|. ++..++.....
T Consensus 24 ~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~----------------------~~~~~d~~-~~~~~p~~~~~ 80 (471)
T 1p8j_A 24 DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD----------------------PGASFDVN-DQDPDPQPRYT 80 (471)
T ss_dssp SCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC----------------------GGGCEETT-TTBSCCCCCCC
T ss_pred CCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC----------------------ccCccccc-CCCCCCCCccC
Confidence 37888999999999999999999999999999984300 01123444 21111111123
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHH-CCCCEEEEeecC
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIA-DGVDIISISVGS 237 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-~gvdVIn~SlG~ 237 (702)
+.|..+|||||||||||...++. |+ .||||+|+|+.+|+++ +..+++++||+++++ ++++|||||||.
T Consensus 81 ~~d~~gHGT~vAGiiaa~~~n~~---g~-----~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G~ 149 (471)
T 1p8j_A 81 QMNDNRHGTRCAGEVAAVANNGV---CG-----VGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWGP 149 (471)
T ss_dssp TTCTTCHHHHHHHHHHCCSSSSS---SC-----CCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCBS
T ss_pred CCCCCCcHHHHHHHHHeeccCCC---CC-----EEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccCc
Confidence 56889999999999999754322 22 8999999999999985 345689999999999 999999999998
Q ss_pred CCCCC---CccCHHHHHHHHHHh-----CCCEEEEccCCCCCCCCC----cCCCCCceEEeeeeccCcceeeEEEeCCCe
Q 043420 238 FSAVN---YFEDTIAIGSFHAMK-----KGILTSNSAGNSGPDAAS----LANVAPWTLSVAASTVDRKFVTRVKLGNGE 305 (702)
Q Consensus 238 ~~~~~---~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~G~~~~~----~~~~a~~vitVgA~~~~~~~~~~~~~~~g~ 305 (702)
..... .....+..++.++.+ +|++||+||||+|..... ....++++|+|||++.+
T Consensus 150 ~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~------------- 216 (471)
T 1p8j_A 150 EDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF------------- 216 (471)
T ss_dssp CCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-------------
T ss_pred CCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-------------
Confidence 63211 112334555555553 699999999999875322 12345899999997643
Q ss_pred EEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCC
Q 043420 306 VYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGND 385 (702)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~ 385 (702)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEe
Q 043420 386 DRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILA 465 (702)
Q Consensus 386 ~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~s 465 (702)
+.++.||++||.. ....+|...+||..|++
T Consensus 217 ------------------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~s 246 (471)
T 1p8j_A 217 ------------------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQIVT 246 (471)
T ss_dssp ------------------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCEEE
T ss_pred ------------------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCEEE
Confidence 3468999999987 44455666666789999
Q ss_pred eccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCCCCC--------CCCcc
Q 043420 466 SWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVEANS--------DAEFA 537 (702)
Q Consensus 466 a~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~~~~--------~~~~~ 537 (702)
+.... ..|..++|||||||||||++|||+|++|+|++++||++|++||+++...... ..+..
T Consensus 247 t~~~~----------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~ 316 (471)
T 1p8j_A 247 TDLRQ----------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHS 316 (471)
T ss_dssp EETTT----------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTT
T ss_pred eeCCC----------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCC
Confidence 87643 3589999999999999999999999999999999999999999987654210 02468
Q ss_pred CCCCCcCccCcCCCce
Q 043420 538 YGSGHLNPSMAVNPGL 553 (702)
Q Consensus 538 ~G~G~in~~~Al~~gl 553 (702)
||+|+||+.+|++...
T Consensus 317 ~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 317 YGYGLLDAGAMVALAQ 332 (471)
T ss_dssp TBTCBCCHHHHHHHHH
T ss_pred CCCEEEcHhHHHHHhh
Confidence 9999999999998543
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8.9e-46 Score=416.37 Aligned_cols=280 Identities=16% Similarity=0.142 Sum_probs=217.7
Q ss_pred ccCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCC
Q 043420 79 FMGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKS 158 (702)
Q Consensus 79 ~~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~ 158 (702)
.+++..+|+.+++|+||+|||||||||++||+|.+.- + ..+.++|. ++. .+...
T Consensus 40 ~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~---------------~~~~~d~~-~~~---~~~~p 93 (503)
T 2id4_A 40 DINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C---------------AEGSWDFN-DNT---NLPKP 93 (503)
T ss_dssp SCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C---------------GGGCEETT-TTB---SCCCC
T ss_pred ccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c---------------ccCcccCC-CCC---CCCCC
Confidence 4778889999999999999999999999999998531 0 01234454 211 11122
Q ss_pred CCCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHHCCCCEEEEeecCC
Q 043420 159 PRDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDGCADADILAAFDDAIADGVDIISISVGSF 238 (702)
Q Consensus 159 ~~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~gvdVIn~SlG~~ 238 (702)
..|..||||||||||||...++. |. .||||+|+|+.+|++... ++..++++||+||++.+ +|||||||..
T Consensus 94 ~~d~~gHGT~vAGiiaa~~~n~~---~~-----~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~ 163 (503)
T 2id4_A 94 RLSDDYHGTRCAGEIAAKKGNNF---CG-----VGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGPA 163 (503)
T ss_dssp CSTTTTHHHHHHHHHHCCSSSSS---SC-----CCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEESC
T ss_pred CCCCCChHHHHHHHHHhccCCCC---Cc-----EEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCcC
Confidence 35788999999999999754322 22 799999999999998643 67889999999999988 9999999987
Q ss_pred CCCCC---ccCHHHHHHHHHH-----hCCCEEEEccCCCCCCCCC--cC--CCCCceEEeeeeccCcceeeEEEeCCCeE
Q 043420 239 SAVNY---FEDTIAIGSFHAM-----KKGILTSNSAGNSGPDAAS--LA--NVAPWTLSVAASTVDRKFVTRVKLGNGEV 306 (702)
Q Consensus 239 ~~~~~---~~~~~~~a~~~a~-----~~Gi~vV~AAGN~G~~~~~--~~--~~a~~vitVgA~~~~~~~~~~~~~~~g~~ 306 (702)
..... ....+..++.++. .+|++||+||||+|..... ++ ..++++|+|||++.+
T Consensus 164 ~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~-------------- 229 (503)
T 2id4_A 164 DDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK-------------- 229 (503)
T ss_dssp CSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT--------------
T ss_pred CCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC--------------
Confidence 32211 2234666666666 4799999999999865322 22 246789999997643
Q ss_pred EeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCC
Q 043420 307 YEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDD 386 (702)
Q Consensus 307 ~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~ 386 (702)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEe----CCCc
Q 043420 387 RDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTA----PGVD 462 (702)
Q Consensus 387 ~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~A----PG~~ 462 (702)
+.++.||++||.. |++| ||..
T Consensus 230 -----------------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG~~ 254 (503)
T 2id4_A 230 -----------------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSGEY 254 (503)
T ss_dssp -----------------------------------------------SCCCTTCCCCTTE--------EEEEECSBTTBC
T ss_pred -----------------------------------------------CCcCCcCCCCCcc--------eEeecCCCCCCc
Confidence 3468999999987 8988 8999
Q ss_pred EEeeccCCCCCCCCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCC-CC--------CC
Q 043420 463 ILASWTQASSPSEGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVE-AN--------SD 533 (702)
Q Consensus 463 I~sa~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~-~~--------~~ 533 (702)
|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|+.||+++... .. ..
T Consensus 255 I~st~~~~----------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~ 324 (503)
T 2id4_A 255 IHSSDING----------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKK 324 (503)
T ss_dssp EEEECSTT----------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSE
T ss_pred eEeecCCC----------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCc
Confidence 99985432 3689999999999999999999999999999999999999999988754 11 00
Q ss_pred CCccCCCCCcCccCcCCCce
Q 043420 534 AEFAYGSGHLNPSMAVNPGL 553 (702)
Q Consensus 534 ~~~~~G~G~in~~~Al~~gl 553 (702)
.+..||+|+||+.+|++...
T Consensus 325 ~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 325 YSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp EBTTTBTCBCCHHHHHHHHT
T ss_pred cCcccCCcEecHHHHHHHHh
Confidence 24689999999999998543
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=8.9e-46 Score=386.25 Aligned_cols=231 Identities=27% Similarity=0.358 Sum_probs=198.1
Q ss_pred hhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCC
Q 043420 84 EHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSE 163 (702)
Q Consensus 84 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~ 163 (702)
.+|+.. +|+||+|+|||||||++||+|.+. +...+.|. + ...|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~-~---------~~~d~~ 68 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR------------------------AKQIKSYA-S---------TARDGH 68 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC------------------------EEEEEECS-S---------SSSCSS
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc------------------------cccccCCC-C---------CCCCCC
Confidence 366666 999999999999999999999842 45555665 1 223889
Q ss_pred CChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHCC-------CCEEEEee
Q 043420 164 GHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIADG-------VDIISISV 235 (702)
Q Consensus 164 gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~g-------vdVIn~Sl 235 (702)
||||||||||+|+. .||||+|+|+.+|+++..+ +..++++++|+|+++++ ++||||||
T Consensus 69 gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~ 134 (279)
T 3f7m_A 69 GHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSL 134 (279)
T ss_dssp SHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECC
T ss_pred CcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCC
Confidence 99999999999863 6999999999999998776 88899999999999976 89999999
Q ss_pred cCCCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCCCc-CCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecc
Q 043420 236 GSFSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAASL-ANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINT 314 (702)
Q Consensus 236 G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~ 314 (702)
|.. ....+..++.++.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 135 g~~-----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---------------------- 187 (279)
T 3f7m_A 135 GGG-----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN---------------------- 187 (279)
T ss_dssp CEE-----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----------------------
T ss_pred CcC-----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC----------------------
Confidence 976 346788888899999999999999998764333 5678999999997543
Q ss_pred cCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccC
Q 043420 315 IDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFP 394 (702)
Q Consensus 315 ~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~ 394 (702)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCC
Q 043420 395 LPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPS 474 (702)
Q Consensus 395 ~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~ 474 (702)
+.++.||++||.. ||+|||++|+++++..
T Consensus 188 ---------------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~~~---- 216 (279)
T 3f7m_A 188 ---------------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWIGG---- 216 (279)
T ss_dssp ---------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECGGG----
T ss_pred ---------------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecCCC----
Confidence 4578999999965 9999999999998764
Q ss_pred CCCCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCC
Q 043420 475 EGDPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATPMSVE 529 (702)
Q Consensus 475 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~~~~~ 529 (702)
.|..++|||||||+|||++|||+|++|. ++++||++|++||++....
T Consensus 217 -------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~~~ 263 (279)
T 3f7m_A 217 -------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNVLT 263 (279)
T ss_dssp -------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESCCB
T ss_pred -------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccccc
Confidence 6899999999999999999999999999 9999999999999875443
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=3.9e-45 Score=404.78 Aligned_cols=244 Identities=19% Similarity=0.231 Sum_probs=188.4
Q ss_pred hcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCCCCCCC
Q 043420 85 HVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSPRDSEG 164 (702)
Q Consensus 85 ~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~~D~~g 164 (702)
.|..+++|+||+|+|||||||++||+|.+. .......+..+.. .......+.|..|
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr-----------------------~~~~~~~~v~~~d-g~~f~~~~~D~~G 73 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGR-----------------------VMVTDFENVPEED-GTRFHRQASKCDS 73 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTT-----------------------EEEEEEECCCCCC--------CTTTTH
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHccc-----------------------ccccCcccccCCC-CccccCCCCCCCC
Confidence 788899999999999999999999999853 1111111110100 0000124568899
Q ss_pred ChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHHHHHHHC------CCCEEEEeecC
Q 043420 165 HGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAFDDAIAD------GVDIISISVGS 237 (702)
Q Consensus 165 HGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~------gvdVIn~SlG~ 237 (702)
|||||||||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|+++. +++|||||||+
T Consensus 74 HGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg 139 (546)
T 2qtw_B 74 HGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAG 139 (546)
T ss_dssp HHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEE
T ss_pred hHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCC
Confidence 9999999999874 6999999999999998776 7888999999999984 89999999997
Q ss_pred CCCCCCccCHHHHHHHHHHhCCCEEEEccCCCCCCCC-CcCCCCCceEEeeeeccCcceeeEEEeCCCeEEeeEeecccC
Q 043420 238 FSAVNYFEDTIAIGSFHAMKKGILTSNSAGNSGPDAA-SLANVAPWTLSVAASTVDRKFVTRVKLGNGEVYEGISINTID 316 (702)
Q Consensus 238 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~a~~vitVgA~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 316 (702)
. ....+..++.++.++|++||+||||+|.... ..+...+++|+|||++.+...
T Consensus 140 ~-----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~--------------------- 193 (546)
T 2qtw_B 140 G-----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP--------------------- 193 (546)
T ss_dssp E-----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB---------------------
T ss_pred C-----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc---------------------
Confidence 6 2467888888999999999999999997542 345678999999998654200
Q ss_pred CCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchhhhhhhcCceEEEEeeCCCCCCCcccCcc
Q 043420 317 YKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDGFGAATARAVGSVMQGNDDRDVAYSFPLP 396 (702)
Q Consensus 317 ~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~aGa~g~i~~~~~~~~~~~~~~~p 396 (702)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCCCCCCCC
Q 043420 397 NSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQASSPSEG 476 (702)
Q Consensus 397 ~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~ 476 (702)
...-..||++|+. |||+|||++|+++++...
T Consensus 194 ------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~----- 224 (546)
T 2qtw_B 194 ------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS----- 224 (546)
T ss_dssp ------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECTTST-----
T ss_pred ------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeeccCCC-----
Confidence 0001238999984 599999999999987531
Q ss_pred CCCCCCceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCcC
Q 043420 477 DPRISPFNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTATP 525 (702)
Q Consensus 477 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~~ 525 (702)
..|..++|||||||||||++|||+|++|+|+|+|||++|++||.+
T Consensus 225 ----~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~ 269 (546)
T 2qtw_B 225 ----TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAK 269 (546)
T ss_dssp ----TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEE
T ss_pred ----CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccc
Confidence 368999999999999999999999999999999999999999964
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.9e-43 Score=407.48 Aligned_cols=288 Identities=20% Similarity=0.202 Sum_probs=199.2
Q ss_pred cCchhhcccCCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCceeEeeeecccCCCCCCCCCCCC
Q 043420 80 MGFSEHVKRATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNNKIIGAKFYRSDKKFSPFDFKSP 159 (702)
Q Consensus 80 ~g~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~~~~ 159 (702)
|++..+|+.+++|+||+|||||||||++||+|.+. ...+.++|. ++. .+....
T Consensus 57 inv~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-----------------------~~~~~~~~~-~~~---~dp~p~ 109 (600)
T 3hjr_A 57 LNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-----------------------VRPGSKNVV-TGS---DDPTPT 109 (600)
T ss_dssp CCCHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-----------------------BCSCCBCTT-TSS---SCCCCC
T ss_pred cCHHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-----------------------cccCcceee-cCC---CCCCCC
Confidence 66778999999999999999999999999999843 011223333 211 112233
Q ss_pred CCCCCChhHHHHHhccCCCCCCcccccccceeeecccCCeEEEEEEecCCC-CCHHHHHHHH-HHHHHCCCCEEEEeecC
Q 043420 160 RDSEGHGTHTSSTAAGGLVSKASLFGIGFGTAIGGVPSARIAVYKICWFDG-CADADILAAF-DDAIADGVDIISISVGS 237 (702)
Q Consensus 160 ~D~~gHGThVAgiaaG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~A~~~gvdVIn~SlG~ 237 (702)
.|+++|||||||||||.. +..|. .||||+|+|+.+|+++..+ +..++++.++ +++..++++|||+|||.
T Consensus 110 ~~~~gHGThVAGiIAa~~----n~~g~-----~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~ 180 (600)
T 3hjr_A 110 DPDTAHGTSVSGIIAAVD----NAIGT-----KGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGM 180 (600)
T ss_dssp STTCCHHHHHHHHHHCCS----SSSSC-----CCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCC
T ss_pred CCCCChHHHHHHHHhEeC----CCCCc-----EEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCc
Confidence 467899999999999863 12232 7999999999999998765 6777777776 67888999999999997
Q ss_pred CCCCCCccCH-----HHHHHHHH--HhCCCEEEEccCCCCCCCCC----------------------cCCCCCceEEeee
Q 043420 238 FSAVNYFEDT-----IAIGSFHA--MKKGILTSNSAGNSGPDAAS----------------------LANVAPWTLSVAA 288 (702)
Q Consensus 238 ~~~~~~~~~~-----~~~a~~~a--~~~Gi~vV~AAGN~G~~~~~----------------------~~~~a~~vitVgA 288 (702)
........+. +..++..+ ..+|+++|+||||.+..... .....+++|+|||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVgA 260 (600)
T 3hjr_A 181 SVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSA 260 (600)
T ss_dssp CCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEEE
T ss_pred cccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEEee
Confidence 6322222222 22222222 25899999999997542100 0011223344433
Q ss_pred eccCcceeeEEEeCCCeEEeeEeecccCCCCceeeEEEcCCCCCCCCCCCCCCCCccCCCCCCccCcCCeEEEEeecchh
Q 043420 289 STVDRKFVTRVKLGNGEVYEGISINTIDYKGKMFPLIYGGDAPNRTGGYQGSNSRFCSLGSLDEKLVQGKIVLCDELNDG 368 (702)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~ 368 (702)
++.
T Consensus 261 ~~~----------------------------------------------------------------------------- 263 (600)
T 3hjr_A 261 LNA----------------------------------------------------------------------------- 263 (600)
T ss_dssp ECT-----------------------------------------------------------------------------
T ss_pred ecC-----------------------------------------------------------------------------
Confidence 322
Q ss_pred hhhhhcCceEEEEeeCCCCCCCcccCcceEEecchhHHHHHHHHhcCCCcEEEEeccccccccCCCcccccCCCCCCCCC
Q 043420 369 FGAATARAVGSVMQGNDDRDVAYSFPLPNSYLDLYDGSKIASYLNSTSIPTATILKSTAEKNEFAPVVASFSSRGPNPIT 448 (702)
Q Consensus 369 ~~~~~aGa~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSS~Gp~~~~ 448 (702)
.+.++.||++|+..
T Consensus 264 ----------------------------------------------------------------~g~~a~yS~~G~~v-- 277 (600)
T 3hjr_A 264 ----------------------------------------------------------------DGVRSSYSSVGSNI-- 277 (600)
T ss_dssp ----------------------------------------------------------------TSSBCTTCCBCTTC--
T ss_pred ----------------------------------------------------------------CCCEeecccCCcce--
Confidence 25678999999987
Q ss_pred CCCCCCcEEeCCCcE--------EeeccCCCCCCC---------------CCCCCCCceEeccccchhHHHHHHHHHHHH
Q 043420 449 NDILKPDLTAPGVDI--------LASWTQASSPSE---------------GDPRISPFNIISGTSMSCPHATAAAAYVKS 505 (702)
Q Consensus 449 ~~~lKPDI~APG~~I--------~sa~~~~~~~~~---------------~~~~~~~y~~~sGTSmAaP~VAG~aALl~q 505 (702)
+++|||..+ .+..++...... .......|..++|||||||||||++|||+|
T Consensus 278 ------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~ 351 (600)
T 3hjr_A 278 ------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMS 351 (600)
T ss_dssp ------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHH
Confidence 899998763 222221110000 112234588999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHhcCcCCCCCCCC-------------------------C---CCccCCCCCcCccCcCCCc
Q 043420 506 FYPSWSPAAIKSALMTTATPMSVEANS-------------------------D---AEFAYGSGHLNPSMAVNPG 552 (702)
Q Consensus 506 ~~P~lsp~~ik~~L~~TA~~~~~~~~~-------------------------~---~~~~~G~G~in~~~Al~~g 552 (702)
++|+|+++|||++|++||++++....+ . ....||+|+||+.+|++..
T Consensus 352 a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 352 AYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp HSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHh
Confidence 999999999999999999988654321 0 2457999999999998743
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=9.7e-25 Score=246.01 Aligned_cols=98 Identities=26% Similarity=0.305 Sum_probs=77.5
Q ss_pred eeecccCCeEEEEEEecCCCCCHHHHHHHHHHHHH---CCCCEEEEeecCCCCC--CCccCHHHHHHHHHHhCCCEEEEc
Q 043420 191 AIGGVPSARIAVYKICWFDGCADADILAAFDDAIA---DGVDIISISVGSFSAV--NYFEDTIAIGSFHAMKKGILTSNS 265 (702)
Q Consensus 191 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~---~gvdVIn~SlG~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~A 265 (702)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||..... ..+...+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999973 356789999999998 7999999999987211 011245667777788999999999
Q ss_pred cCCCCCCC--------CCcCCCCCceEEeeeeccC
Q 043420 266 AGNSGPDA--------ASLANVAPWTLSVAASTVD 292 (702)
Q Consensus 266 AGN~G~~~--------~~~~~~a~~vitVgA~~~~ 292 (702)
|||+|... ..++..+|++++||+++..
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 99999653 2445678999999998754
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.84 E-value=1.6e-21 Score=209.53 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=80.5
Q ss_pred eecccCCeEEEEEEecCCCCCHHHHHHHHHHHHH-CCCCEEEEeecCCCC---CCCccCHHHHHHHHHHhCCCEEEEccC
Q 043420 192 IGGVPSARIAVYKICWFDGCADADILAAFDDAIA-DGVDIISISVGSFSA---VNYFEDTIAIGSFHAMKKGILTSNSAG 267 (702)
Q Consensus 192 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-~gvdVIn~SlG~~~~---~~~~~~~~~~a~~~a~~~Gi~vV~AAG 267 (702)
..+||+|+++.|++.+..+++.++++++|+||++ ++++|||||||.... .......+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 3478999999999987655778899999999998 899999999998621 111234567777778889999999999
Q ss_pred CCCCCCC-------------CcCCCCCceEEeeeeccC
Q 043420 268 NSGPDAA-------------SLANVAPWTLSVAASTVD 292 (702)
Q Consensus 268 N~G~~~~-------------~~~~~a~~vitVgA~~~~ 292 (702)
|+|...+ ..+..+|++++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9997532 344578999999998754
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.94 E-value=1.6e-09 Score=121.18 Aligned_cols=99 Identities=12% Similarity=0.129 Sum_probs=61.8
Q ss_pred ecccCCeEEEEEEecCCCCCHHHHHHHHHHHHH--CCCCEEEEeecCCCCC--CCccCHHHHHHHHHHhCCCEEEEccCC
Q 043420 193 GGVPSARIAVYKICWFDGCADADILAAFDDAIA--DGVDIISISVGSFSAV--NYFEDTIAIGSFHAMKKGILTSNSAGN 268 (702)
Q Consensus 193 GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~--~gvdVIn~SlG~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~AAGN 268 (702)
++++...++.|..... ....+.++..+++... +-++|||+|||..... ..+...+...+.++..+||.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 4445555555533211 1122334544444332 4578999999987211 112234556666778899999999999
Q ss_pred CCCCC----------CCcCCCCCceEEeeeeccC
Q 043420 269 SGPDA----------ASLANVAPWTLSVAASTVD 292 (702)
Q Consensus 269 ~G~~~----------~~~~~~a~~vitVgA~~~~ 292 (702)
+|... ...+...|||++||+++..
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l~ 375 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQ 375 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEES
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeecc
Confidence 99753 2345678999999998753
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.41 E-value=2.2e-07 Score=82.04 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=54.6
Q ss_pred ChhhHHHHHHHHhcCCCCCCcEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEeCceecc
Q 043420 10 SATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQL 71 (702)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~l~~~p~V~~v~~~~~~~~ 71 (702)
.+.+|++|+.+.+.++....+++|+|++.|+||+++|+++++++|+++|+|.+|+||+.++.
T Consensus 52 ~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 52 QSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 46678888888777655667999999999999999999999999999999999999998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.12 E-value=3.8e-06 Score=69.18 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=43.1
Q ss_pred CCcEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEeCceeccccCC
Q 043420 28 SDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQLHTTR 75 (702)
Q Consensus 28 ~~~~~~~y~~~~ng~s~~l~~~~~~~l~~~p~V~~v~~~~~~~~~~~~ 75 (702)
..+++|+|++ |+||+++++++++++|+++|+|.+|+||..++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 4589999998 9999999999999999999999999999999987664
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=97.92 E-value=7.9e-06 Score=73.00 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=48.4
Q ss_pred hhhHHHHHHHHhcCCCCCCcEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEeCceecc
Q 043420 11 ATSFHTSMLHQVLGRSASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQL 71 (702)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~l~~~p~V~~v~~~~~~~~ 71 (702)
+..|.+++.+.+.++....+++|+|++.|+||+++++.+++++|+++|+|.+|+++..++.
T Consensus 63 ~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 63 SERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 3444445444333333456899999999999999999999999999999999999988764
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.81 E-value=7.7e-05 Score=71.56 Aligned_cols=82 Identities=13% Similarity=0.005 Sum_probs=65.5
Q ss_pred CCCccCCCCCCccC-------cCCeEEEEeec------chhhhhhhcCceEEEEeeCCCCC-C------CcccCcceEEe
Q 043420 341 NSRFCSLGSLDEKL-------VQGKIVLCDEL------NDGFGAATARAVGSVMQGNDDRD-V------AYSFPLPNSYL 400 (702)
Q Consensus 341 ~~~~c~~~~~~~~~-------~~gkivl~~~~------~~~~~~~~aGa~g~i~~~~~~~~-~------~~~~~~p~~~i 400 (702)
....|.+....... .+|||+|++|. +|..+++++||.++|+||+...+ . .....+|+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45789887653322 47999999883 68999999999999999985211 1 13357999999
Q ss_pred cchhHHHHHHHHhcCCCcEEEE
Q 043420 401 DLYDGSKIASYLNSTSIPTATI 422 (702)
Q Consensus 401 ~~~~~~~l~~~~~~~~~~~~~i 422 (702)
+..+|+.|+..+..+...+++|
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti 183 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVI 183 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEE
Confidence 9999999999999998888888
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.29 E-value=0.00054 Score=55.49 Aligned_cols=43 Identities=16% Similarity=0.359 Sum_probs=38.8
Q ss_pred CcEEEEec-ceeeEEEEEeCHHHHHHHhcC--CCeEEEEeCceecc
Q 043420 29 DHLLHSYH-RSFNGFVAKLTHDEAQRLKGM--QGVMSVFPNGKKQL 71 (702)
Q Consensus 29 ~~~~~~y~-~~~ng~s~~l~~~~~~~l~~~--p~V~~v~~~~~~~~ 71 (702)
.++.+.|. .+|+||++.++++++++|+++ |.|.+||+|..++.
T Consensus 30 g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 30 GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 36889994 899999999999999999999 88999999987753
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.43 E-value=0.0027 Score=49.62 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=40.3
Q ss_pred CCCCcEEEEecceeeEEEEEeCHHHHHHHhcCCCeEEEEeCceec
Q 043420 26 SASDHLLHSYHRSFNGFVAKLTHDEAQRLKGMQGVMSVFPNGKKQ 70 (702)
Q Consensus 26 ~~~~~~~~~y~~~~ng~s~~l~~~~~~~l~~~p~V~~v~~~~~~~ 70 (702)
..+.++.++| ..+++++++|+.+.+++|+++|+|++|++|...+
T Consensus 20 ~~gG~i~~~~-~~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQF-KLIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEEC-SSSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEe-cCCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 4567899999 8899999999999999999999999999998764
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.52 E-value=0.093 Score=46.27 Aligned_cols=73 Identities=14% Similarity=0.125 Sum_probs=53.9
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEEEEEEE-CCCceEEe
Q 043420 612 TTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWD-DGVHHVRS 690 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~~~~~-~~~~~v~~ 690 (702)
.+.+.+.+|+|+|+.+..|+..... -.+|+|..-++ ++|+++.++|+|.... .+.+.+.|... +++..+.+
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~~v 112 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKVFV 112 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEECC
T ss_pred CeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEEEE
Confidence 4677888999999988888877643 34668999999 8899999999998764 23455666553 55555555
Q ss_pred EE
Q 043420 691 PV 692 (702)
Q Consensus 691 P~ 692 (702)
++
T Consensus 113 ~L 114 (122)
T 2ys4_A 113 SL 114 (122)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=92.85 E-value=0.24 Score=53.96 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=54.0
Q ss_pred ccCcCCeEEEEeecc--------------h----hhhhhhcCceEEEEeeCCCCCC----------C-cccCcceEEecc
Q 043420 352 EKLVQGKIVLCDELN--------------D----GFGAATARAVGSVMQGNDDRDV----------A-YSFPLPNSYLDL 402 (702)
Q Consensus 352 ~~~~~gkivl~~~~~--------------~----~~~~~~aGa~g~i~~~~~~~~~----------~-~~~~~p~~~i~~ 402 (702)
..+++|||||+.+.. | ..++.++||+|+|++++..... . ....+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 468999999998621 1 2468899999999999743211 1 234689999999
Q ss_pred hhHHHHHHHHhcCCCcEEEE
Q 043420 403 YDGSKIASYLNSTSIPTATI 422 (702)
Q Consensus 403 ~~~~~l~~~~~~~~~~~~~i 422 (702)
++++.|+..+..+...++++
T Consensus 204 ~da~~L~~~l~~g~~~~v~l 223 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISL 223 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEE
Confidence 99999999998776666666
No 46
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=92.84 E-value=0.19 Score=54.42 Aligned_cols=62 Identities=21% Similarity=0.207 Sum_probs=50.7
Q ss_pred ccCcCCeEEEEee-----cchhhhhhhcCceEEEEeeCCCCCCC------cccCcceEEecchhHHHHHHHHh
Q 043420 352 EKLVQGKIVLCDE-----LNDGFGAATARAVGSVMQGNDDRDVA------YSFPLPNSYLDLYDGSKIASYLN 413 (702)
Q Consensus 352 ~~~~~gkivl~~~-----~~~~~~~~~aGa~g~i~~~~~~~~~~------~~~~~p~~~i~~~~~~~l~~~~~ 413 (702)
..+++|||+|+.+ .+|..+++++||.|+|++++...... ....+|...|+.++++.|+..+.
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3479999999986 56889999999999999998643221 24568999999999999999984
No 47
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=92.59 E-value=0.94 Score=40.82 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=61.7
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcC----CCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeC-----CCC-CeEEEEEEEE
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTR----PGLMIKVQPSVLYFKSLYQKQSFVVTVTANVG-----KSV-NMISASLVWD 682 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~----~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~-----~~~-~~~~G~~~~~ 682 (702)
..+-+.+++|.|.-+.+|++..... ..--++|+|..-++ ++|++.+++|++.++.. ..+ .-++--|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 4566778899999999999985321 11236678999999 89999999999987542 111 2345567774
Q ss_pred -CCCceEEeEEEEEec
Q 043420 683 -DGVHHVRSPVVAFVA 697 (702)
Q Consensus 683 -~~~~~v~~P~~~~~~ 697 (702)
.++....+|+...+.
T Consensus 123 Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 123 LDRGKDYFLTISGNYL 138 (140)
T ss_dssp ETTSCEEEEEEEEEEC
T ss_pred eecCCcEEEEEecccc
Confidence 788899999988765
No 48
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=92.47 E-value=0.089 Score=63.89 Aligned_cols=48 Identities=15% Similarity=0.187 Sum_probs=36.5
Q ss_pred CCCCCCcEEEEeccCCCCCCCCCCCCCCCCCCCCccccccCCCCcccCc-eeEeeeecccCCCCCCC
Q 043420 89 ATTESDIIVGMLDTGIWPESQSFSDENFGPPPKKWKGSCQTSSNFTCNN-KIIGAKFYRSDKKFSPF 154 (702)
Q Consensus 89 ~~~G~gV~VgVIDtGid~~Hp~f~d~~~~~~~~~w~g~~~~~~~~~~n~-kiig~~~~~~~~~~~~~ 154 (702)
.+.|+||+|||+|||||+.+|.|.-..-+ .. |||...++++.|.++..
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~t~dG------------------~~~Kiid~~D~tG~GDVdts 80 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLETLCDG------------------KTVKVIERYDCSGCGDVDMK 80 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSCCTTS------------------SSCSCCEEEETTSTTEEETT
T ss_pred CCCCCccEEEEEeCCCCCCCCcceecCCC------------------CcceeEEEEeCCCCCccccc
Confidence 78999999999999999999999732111 24 78888888866655443
No 49
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=87.63 E-value=2.3 Score=36.95 Aligned_cols=55 Identities=11% Similarity=0.052 Sum_probs=45.7
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeC
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVG 669 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~ 669 (702)
.-..+..+.|....+.+|+++++.++|+++. .|..+++ ++|+..++.|.|.+...
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEEChH
Confidence 4567788999999999999999998887663 3667888 89999999999998653
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.81 E-value=2.7 Score=35.77 Aligned_cols=82 Identities=12% Similarity=0.159 Sum_probs=54.9
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEEc-CCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEEEEEEE-CC-CceE
Q 043420 612 TTQVFHRTVTNVGSAVSTYRAVVYT-RPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWD-DG-VHHV 688 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~ty~~~~~~-~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~~~~~-~~-~~~v 688 (702)
...+.+-+++|.|+.+..|+..... +.+...+++|..-.+ ++|++++++|+|.... . +.+.=.|++. ++ ...+
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~--~-g~f~~~i~v~~~g~~~~~ 101 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII--L-GNFEEEFLVNVNGSPEPV 101 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC--C-EEEEEEECEEESSCSSCC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC--c-ceEEEEEEEEECCCCceE
Confidence 3566778899999999999984321 123346779999999 8899999999998754 2 3344456664 33 3445
Q ss_pred EeEEEEEec
Q 043420 689 RSPVVAFVA 697 (702)
Q Consensus 689 ~~P~~~~~~ 697 (702)
++-+-....
T Consensus 102 ~L~i~G~vv 110 (112)
T 2e6j_A 102 KLTIRGCVI 110 (112)
T ss_dssp CEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 555544433
No 51
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=84.70 E-value=0.99 Score=51.30 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=47.8
Q ss_pred cCcCCeEEEEee-----cchhhhhhhcCceEEEEeeCCCCC-C-----------------C-------------------
Q 043420 353 KLVQGKIVLCDE-----LNDGFGAATARAVGSVMQGNDDRD-V-----------------A------------------- 390 (702)
Q Consensus 353 ~~~~gkivl~~~-----~~~~~~~~~aGa~g~i~~~~~~~~-~-----------------~------------------- 390 (702)
.+++|||+|+.+ .+|..++.++||.|+|++++.... . +
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999987 568899999999999999975310 0 0
Q ss_pred cccCcceEEecchhHHHHHHHHh
Q 043420 391 YSFPLPNSYLDLYDGSKIASYLN 413 (702)
Q Consensus 391 ~~~~~p~~~i~~~~~~~l~~~~~ 413 (702)
....+|+..|+.++++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02358999999999999987654
No 52
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=84.04 E-value=1.1 Score=51.61 Aligned_cols=63 Identities=21% Similarity=0.183 Sum_probs=49.2
Q ss_pred ccCcCCeEEEEee-----cchhhhhhhcCceEEEEeeCCC-----C--------------------------CCC-----
Q 043420 352 EKLVQGKIVLCDE-----LNDGFGAATARAVGSVMQGNDD-----R--------------------------DVA----- 390 (702)
Q Consensus 352 ~~~~~gkivl~~~-----~~~~~~~~~aGa~g~i~~~~~~-----~--------------------------~~~----- 390 (702)
..+++|||+|+++ .+|..+++.+||.|+|+|++.. . +.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 4479999999996 5789999999999999998621 0 000
Q ss_pred ---------------cccCcceEEecchhHHHHHHHHhc
Q 043420 391 ---------------YSFPLPNSYLDLYDGSKIASYLNS 414 (702)
Q Consensus 391 ---------------~~~~~p~~~i~~~~~~~l~~~~~~ 414 (702)
....||++-|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 024689999999999999987753
No 53
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=78.07 E-value=1.3 Score=48.11 Aligned_cols=30 Identities=27% Similarity=0.331 Sum_probs=25.8
Q ss_pred CCcccccCCCCCCCCCCCCCCCcEEeCCCcEEeeccCC
Q 043420 433 APVVASFSSRGPNPITNDILKPDLTAPGVDILASWTQA 470 (702)
Q Consensus 433 ~~~~a~fSS~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 470 (702)
.+.++.||++||.. ||+|||++|+++++..
T Consensus 183 ~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 36789999999866 9999999999998743
No 54
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=73.95 E-value=21 Score=37.33 Aligned_cols=84 Identities=13% Similarity=0.084 Sum_probs=59.7
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCe----EEEEEcCeEEEeeCCeEEEEEEEEEEeeCC-----C-CCeEEEEEEEE
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGL----MIKVQPSVLYFKSLYQKQSFVVTVTANVGK-----S-VNMISASLVWD 682 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~----~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~-----~-~~~~~G~~~~~ 682 (702)
..+-+.|++|.|..+.+|++........ =++|+|..-++ .+|++++++|++.+.... . ..-.+--|++.
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 5566678899999999999965432221 17789999999 899999999999886521 0 12234456664
Q ss_pred -CCCceEEeEEEEEec
Q 043420 683 -DGVHHVRSPVVAFVA 697 (702)
Q Consensus 683 -~~~~~v~~P~~~~~~ 697 (702)
++++...+|+-+.+.
T Consensus 126 ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 126 LDRGKDYFLTISGNYL 141 (366)
T ss_dssp ETTSCEEEEEEEEEEC
T ss_pred EeCCCcEEEEeccccC
Confidence 677777888877654
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=73.07 E-value=13 Score=35.86 Aligned_cols=80 Identities=10% Similarity=0.012 Sum_probs=53.8
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEEEEEEE--C--CCc--
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLVWD--D--GVH-- 686 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~~~~~--~--~~~-- 686 (702)
..+.+-+++|.|+.+.+++... .|+.+++.. ..-.+ ++|++.+++|+++......-+...+.|+.. + +..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~--~~~~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~~ 95 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSFVSLDD--RAFRL-QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKKA 95 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTTEECSC--CEEEE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCEE
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCceEeee--Cccee-CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCccc
Confidence 4566778999999998888653 476766544 44445 889999999999876543335556777764 3 222
Q ss_pred eEEeEEEEEe
Q 043420 687 HVRSPVVAFV 696 (702)
Q Consensus 687 ~v~~P~~~~~ 696 (702)
..++|+....
T Consensus 96 ~~~i~v~g~v 105 (220)
T 2qsv_A 96 VDSVMVSLPL 105 (220)
T ss_dssp EEEEEEEEEE
T ss_pred ccEEEEEEEE
Confidence 4477776643
No 56
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=66.89 E-value=1.4 Score=38.51 Aligned_cols=55 Identities=20% Similarity=0.104 Sum_probs=36.5
Q ss_pred EEEEEEEEecCCCCeeEEEEEE-cCCCeEEEEEcCeEEEe-eCCeEEEEEEEEEEee
Q 043420 614 QVFHRTVTNVGSAVSTYRAVVY-TRPGLMIKVQPSVLYFK-SLYQKQSFVVTVTANV 668 (702)
Q Consensus 614 ~t~~rtvtnvg~~~~ty~~~~~-~~~g~~v~v~p~~l~~~-~~g~~~~~~vt~~~~~ 668 (702)
..+..-|+|.+.+..+..+.++ .|.|++++++|++++++ ....+++|.|+++...
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 4444555666554444455566 58899999999987765 4556677777776644
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=66.36 E-value=31 Score=30.14 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=36.3
Q ss_pred ccEEEEEEEEecCCCC-eeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEE
Q 043420 612 TTQVFHRTVTNVGSAV-STYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVT 665 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~-~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~ 665 (702)
...+++.||+|.|..+ ..|++.+.. .|..+.- ..+.+ ++|+++++++++.
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t--~~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKN--WTVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEE--EEEEE-CTTCEEEEEEEEC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEee--EEecc-CCCCeEEEEEEEE
Confidence 5789999999999755 568888766 3544432 24456 8899998777765
No 58
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=53.62 E-value=56 Score=36.28 Aligned_cols=78 Identities=17% Similarity=0.095 Sum_probs=49.0
Q ss_pred CCeEEEecCCCCCccEEEEEEEEecCCCCeeE-EEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEE
Q 043420 599 YPSFALSTKPGNNTTQVFHRTVTNVGSAVSTY-RAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISA 677 (702)
Q Consensus 599 ~ps~~~~~~~~~~~~~t~~rtvtnvg~~~~ty-~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G 677 (702)
.|.+++... .+.+++.+|+|-+..+..- ++++..|.+.+++. ....| ++|++++++|+|++......+.+.=
T Consensus 364 ~~~~~~~~g----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y~l 436 (601)
T 1w8o_A 364 IPDVALEPG----QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRYRV 436 (601)
T ss_dssp CCCEEECTT----CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEEEE
T ss_pred CccceecCC----ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCCCCcEEe
Confidence 466666643 4788999999976533322 44567788988876 24445 6799999988888865333233322
Q ss_pred EEEEEC
Q 043420 678 SLVWDD 683 (702)
Q Consensus 678 ~~~~~~ 683 (702)
.+.+..
T Consensus 437 ~~~~~~ 442 (601)
T 1w8o_A 437 GATLRT 442 (601)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 344443
No 59
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=47.79 E-value=68 Score=27.76 Aligned_cols=53 Identities=8% Similarity=-0.018 Sum_probs=44.1
Q ss_pred ccEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEe
Q 043420 612 TTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTAN 667 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 667 (702)
...+-..+|+|.++...-|.+...+|.-. .|.|..=.+ .+|++..+.|++...
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~y--~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGGE--EEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCce--EEeCCCcEE-CCCCeEEEEEEECcC
Confidence 35677888999999888999999998765 568998777 889999999998764
No 60
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=45.56 E-value=14 Score=27.73 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=27.1
Q ss_pred cchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhcCc
Q 043420 490 SMSCPHATAAAAYVKSFYPSWSPAAIKSALMTTAT 524 (702)
Q Consensus 490 SmAaP~VAG~aALl~q~~P~lsp~~ik~~L~~TA~ 524 (702)
|-..|..--.+..|++.||+++...|+.+|...-.
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 43444455667889999999999999999986643
No 61
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=44.48 E-value=72 Score=28.67 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=43.4
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEe
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTAN 667 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 667 (702)
..+-..+|+|..+...-|.+...+|.-+ .|.|..=.+ .+|++.+++|++...
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKY--RVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTE--EEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCce--eecCCCcEE-CCCCeEEEEEEecCc
Confidence 4456788999999888999999999766 558998777 889999999998763
No 62
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=43.18 E-value=1.1e+02 Score=25.87 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=41.5
Q ss_pred EEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEe
Q 043420 615 VFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTAN 667 (702)
Q Consensus 615 t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 667 (702)
+.+.+++|..+....|.+....|.-+ .|.|..=.+ ++|++.++.|+....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y--~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEY--RIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSE--EEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCce--EEcCCceEE-CCCCeEEEEEEeCCC
Confidence 45778899999999999999988776 457988767 889999999888764
No 63
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=42.71 E-value=93 Score=26.65 Aligned_cols=51 Identities=8% Similarity=0.087 Sum_probs=42.0
Q ss_pred EEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEee
Q 043420 615 VFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANV 668 (702)
Q Consensus 615 t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 668 (702)
+.+.+|+|..+....|.+....|.-+ .|.|..=.+ ++|++.++.|+.....
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Y--rVrP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHY--RVRPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTE--EEECSEEEE-CTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCce--EEcCCceEE-CCCCeEEEEEEeCCCC
Confidence 56788999999888999998888776 457888666 8899999999888653
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=42.23 E-value=67 Score=27.84 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=42.9
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEE
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTA 666 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~ 666 (702)
..+-..+|+|.++..--|.+...+|.-. .|.|..=.+ .+|++..+.|++..
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEE-CCCCEEEEEEEecC
Confidence 4556778999999999999999999876 558998878 88999999998876
No 65
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=37.54 E-value=1.6e+02 Score=27.98 Aligned_cols=89 Identities=16% Similarity=0.078 Sum_probs=52.8
Q ss_pred CeEEEecCCCCCccEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCC-e--EE
Q 043420 600 PSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVN-M--IS 676 (702)
Q Consensus 600 ps~~~~~~~~~~~~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~-~--~~ 676 (702)
..+-+.... . ...+.+-+++|.|+.+...+-....-.-..+.. ..-.+ ++||+.++.|+++.... .+. | ..
T Consensus 124 ~~~dfG~i~-g-~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~--~~~~i-~PGe~~~i~v~~~~~~~-~g~~~~~~~ 197 (220)
T 2qsv_A 124 TYLDMGQLD-G-ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVP--DRTEI-KPGGSTLLRIAVDPQVM-KAEGWQSIA 197 (220)
T ss_dssp CEEEEEECT-T-SCEEEEEEEEECSSSCEEEEEEEECSTTEEEEE--SCSEE-CTTCEEEEEEEECHHHH-HHTTCSEEE
T ss_pred eEEeeeccC-C-CeEEEEEEEEECCCCCEEEEEEEeCCCCEeeec--CCccC-CCCCEEEEEEEEecCCC-CCcccceec
Confidence 444455444 2 567778899999998887653333333444443 33345 89999999999986542 122 1 45
Q ss_pred EEEEE-EC-CC-ceEEeEEEE
Q 043420 677 ASLVW-DD-GV-HHVRSPVVA 694 (702)
Q Consensus 677 G~~~~-~~-~~-~~v~~P~~~ 694 (702)
..|+. ++ .. ..+++.|-+
T Consensus 198 ~~i~v~~N~~~~p~~~l~i~~ 218 (220)
T 2qsv_A 198 ADISIICNDPQAPLRRIKVKA 218 (220)
T ss_dssp EEEEEEESCTTCSEEEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEEEE
Confidence 66655 44 22 344655543
No 66
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=36.69 E-value=27 Score=28.58 Aligned_cols=39 Identities=15% Similarity=0.243 Sum_probs=30.3
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCeEE-EEEcCeEEE
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGLMI-KVQPSVLYF 651 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v-~v~p~~l~~ 651 (702)
......-|+++.+...+|.+.+..|+|+.+ .|+|+++++
T Consensus 42 di~A~VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~ 81 (90)
T 3lyw_A 42 ELFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTL 81 (90)
T ss_dssp TCEEEEECTTCCSEEEEEECEECCCTTEEEEEEESSEEEE
T ss_pred HEEEEEECcCCCCCcEeEEEEEECCCCCEEEEEccceEEE
Confidence 455566667777777789999999999765 789998877
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=36.06 E-value=86 Score=36.65 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=80.3
Q ss_pred ceEeccccchhHHHHHHHHHHHHhCCCCC-HHHHHHHHHhcCcCCCCCCCC-----C-CCccCCCCCcCccCcCCCc-ee
Q 043420 483 FNIISGTSMSCPHATAAAAYVKSFYPSWS-PAAIKSALMTTATPMSVEANS-----D-AEFAYGSGHLNPSMAVNPG-LV 554 (702)
Q Consensus 483 y~~~sGTSmAaP~VAG~aALl~q~~P~ls-p~~ik~~L~~TA~~~~~~~~~-----~-~~~~~G~G~in~~~Al~~g-lv 554 (702)
...++|..++-|.+.-+.|+|..++|.-- ...|-.+|.--..|-..-... . .|..+-+.. ..+ ..
T Consensus 619 VVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~~~~~-------~~g~~~ 691 (845)
T 3abz_A 619 IVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFKT-------EFGRVI 691 (845)
T ss_dssp EEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTTSCSC-------BTTEEE
T ss_pred EEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCccccCCC-------CCCcee
Confidence 45777888888888888888888888765 567777776655442221100 0 011111100 011 12
Q ss_pred eeCCc-hhhHhhhhcCCCCCCcceeecCCCccccCCCCCCccCCCCCeEEEe--cCCCCCccEEEEEEEEecC-CCCeeE
Q 043420 555 YDAGE-LDYVKFLCGQGYSDKNLSLVTGDNRSCSNSTNATVWDLNYPSFALS--TKPGNNTTQVFHRTVTNVG-SAVSTY 630 (702)
Q Consensus 555 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~--~~~~~~~~~t~~rtvtnvg-~~~~ty 630 (702)
|..+. -+|-.|.-. +.+.+ | +| ..-|-|-+|..+ .+.-.....+++.+|||+| +....-
T Consensus 692 y~eg~~vgYR~y~~~---~~~pl--f---PF---------G~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~e 754 (845)
T 3abz_A 692 YGEDIFVGYRYYEKL---QRKVA--F---PF---------GYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSE 754 (845)
T ss_dssp CTTTTCCTHHHHHHH---TCCCS--B---CT---------TCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEE
T ss_pred ccCCccCCCcchhcC---CCcee--e---cc---------cCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcce
Confidence 22211 123222110 00000 0 01 234666667666 4421025689999999999 765554
Q ss_pred EEEE--EcCCC-e-----EEEEEcCeEEEeeCCeEEEEEEEEE
Q 043420 631 RAVV--YTRPG-L-----MIKVQPSVLYFKSLYQKQSFVVTVT 665 (702)
Q Consensus 631 ~~~~--~~~~g-~-----~v~v~p~~l~~~~~g~~~~~~vt~~ 665 (702)
.+.+ ..|.+ + .++- =.++.+ ++||+++++++++
T Consensus 755 VvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~ 795 (845)
T 3abz_A 755 VVQVYFSALNSKVSRPVKELKG-FEKVHL-EPGEKKTVNIDLE 795 (845)
T ss_dssp EEEEEEEESSCSSCCCSCEEEE-EEEEEE-CTTCEEEEEEEEE
T ss_pred eeeeeEeCCCCCcchhhheecc-ceeEEE-CCCCEEEEEEEeC
Confidence 4443 33322 1 1111 112345 8999999999888
No 68
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=35.17 E-value=80 Score=36.12 Aligned_cols=55 Identities=9% Similarity=0.022 Sum_probs=35.3
Q ss_pred ccEEEEEEEEecCCCCeeEEEEE--EcCCCe------EEEEEcCeEEEeeCCeEEEEEEEEEEee
Q 043420 612 TTQVFHRTVTNVGSAVSTYRAVV--YTRPGL------MIKVQPSVLYFKSLYQKQSFVVTVTANV 668 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~ty~~~~--~~~~g~------~v~v~p~~l~~~~~g~~~~~~vt~~~~~ 668 (702)
...+++.+|||+|+....-.+.+ ..|.+. .++- =.++.+ ++||+++++++++...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~g-F~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRG-FAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEE-EEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhh-ccccee-CCCCeEEEEEEEcHHH
Confidence 45789999999998766555544 334321 1111 112345 8999999988888643
No 69
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=33.94 E-value=23 Score=40.69 Aligned_cols=70 Identities=16% Similarity=0.212 Sum_probs=41.0
Q ss_pred CCCCCeEEEecCC--CCCccEEEEEEEEecCCCCeeEEEE--EEcCCCeEEEEEcC-------eE-EEeeCCeEEEEEEE
Q 043420 596 DLNYPSFALSTKP--GNNTTQVFHRTVTNVGSAVSTYRAV--VYTRPGLMIKVQPS-------VL-YFKSLYQKQSFVVT 663 (702)
Q Consensus 596 ~ln~ps~~~~~~~--~~~~~~t~~rtvtnvg~~~~ty~~~--~~~~~g~~v~v~p~-------~l-~~~~~g~~~~~~vt 663 (702)
-|.|-+|..+.+. ......+++.+|||+|+....-.+. +..|.+ .+. .|. ++ .+ ++||+++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~-~~~-~P~k~L~gF~kv~~L-~pGes~~V~~~ 673 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKG-KID-KPFQELKAFHKTRLL-NPGESEEVVLE 673 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCS-SSC-CCSCEEEEEEECCCB-CTTCEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCC-CCC-CchHHhhcccccccC-CCCCeEEEEEE
Confidence 4555555555432 1124689999999999865544443 333432 111 122 22 23 88999999888
Q ss_pred EEEee
Q 043420 664 VTANV 668 (702)
Q Consensus 664 ~~~~~ 668 (702)
|+...
T Consensus 674 l~~~~ 678 (721)
T 2x41_A 674 IPVRD 678 (721)
T ss_dssp EEGGG
T ss_pred ECHHH
Confidence 88643
No 70
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=33.67 E-value=1e+02 Score=27.38 Aligned_cols=52 Identities=8% Similarity=-0.016 Sum_probs=43.4
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEe
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTAN 667 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~ 667 (702)
.++-..+|+|..+...-|.+...+|.-+ .|.|..=.+ .++++..+.|++...
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSE--EEESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccE--EEcCCCcEE-CCCCeEEEEEEECCC
Confidence 4566788999999888999999999876 457998767 889999999998764
No 71
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=30.72 E-value=36 Score=30.90 Aligned_cols=33 Identities=12% Similarity=0.011 Sum_probs=27.3
Q ss_pred eEeccccchhHHHHHHHHHHHHhCCCCCHHHHHH
Q 043420 484 NIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKS 517 (702)
Q Consensus 484 ~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~ 517 (702)
..+.|-| =|+.|-|++|||++.+-+.+|++|.+
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 3344555 38999999999999999999999865
No 72
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=29.34 E-value=2.3e+02 Score=23.58 Aligned_cols=66 Identities=15% Similarity=0.124 Sum_probs=43.0
Q ss_pred eEEEecCCCCCccEEEEEEEEecCCCCeeEEEEEEcCCCeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCCCeEEEEEE
Q 043420 601 SFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVYTRPGLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSVNMISASLV 680 (702)
Q Consensus 601 s~~~~~~~~~~~~~t~~rtvtnvg~~~~ty~~~~~~~~g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~~~~~G~~~ 680 (702)
-++|.+.. ..-.++.||+|-......|+=....|.-+.+.+ ...++-.|+|.+.... .++.|..+
T Consensus 35 vlsV~F~~---~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdL--------nge~sG~Y~IeI~~~~----~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGR---AKDYAIITVTNKATGEIVHSKTYHNTSIVMIDM--------SSCEKGEYTIHIILND----CLLEGTFT 99 (101)
T ss_dssp EEEEEESS---CCSCEEEEEEETTTCCEEEEEEESSCSEEEEEC--------TTSCSEEEEEEEEETT----EEEEEEEE
T ss_pred EEEEEecc---CCCcEEEEEEECCCCcEEEEEeccCCcEEEEEc--------CCCcCceEEEEEEeCC----cEEEEEEE
Confidence 56777765 345688999998666788888776654333322 2334678888777643 56777755
Q ss_pred E
Q 043420 681 W 681 (702)
Q Consensus 681 ~ 681 (702)
.
T Consensus 100 i 100 (101)
T 3sd2_A 100 V 100 (101)
T ss_dssp E
T ss_pred e
Confidence 3
No 73
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=26.82 E-value=2e+02 Score=24.36 Aligned_cols=25 Identities=16% Similarity=0.337 Sum_probs=18.3
Q ss_pred ccEEEEEEEEecCCCC-eeEEEEEEc
Q 043420 612 TTQVFHRTVTNVGSAV-STYRAVVYT 636 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~-~ty~~~~~~ 636 (702)
...+++.+|+|.|... ..+++.+..
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~ 44 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLV 44 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEE
Confidence 5789999999999753 346665543
No 74
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=26.15 E-value=35 Score=30.45 Aligned_cols=34 Identities=18% Similarity=0.126 Sum_probs=28.6
Q ss_pred ceEeccccchhHHHHHHHHHHHHhCCCCCHHHHHH
Q 043420 483 FNIISGTSMSCPHATAAAAYVKSFYPSWSPAAIKS 517 (702)
Q Consensus 483 y~~~sGTSmAaP~VAG~aALl~q~~P~lsp~~ik~ 517 (702)
-..+.|-|= |+.|-|++|||++.+-+.+|++|.+
T Consensus 69 ~l~f~adSD-A~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 69 IIELQGDSD-AAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp BEEEEEEES-SHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEEecCc-cHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 355667774 8999999999999999999999864
No 75
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=25.41 E-value=2.8e+02 Score=23.18 Aligned_cols=78 Identities=8% Similarity=-0.079 Sum_probs=35.4
Q ss_pred CCeEEEecCCCCCccEEEEEEEEecCCCCeeEEEEEE-----cCCCeEEEEEcCeEEEeeCCeE-EEEEEEEEEeeCCCC
Q 043420 599 YPSFALSTKPGNNTTQVFHRTVTNVGSAVSTYRAVVY-----TRPGLMIKVQPSVLYFKSLYQK-QSFVVTVTANVGKSV 672 (702)
Q Consensus 599 ~ps~~~~~~~~~~~~~t~~rtvtnvg~~~~ty~~~~~-----~~~g~~v~v~p~~l~~~~~g~~-~~~~vt~~~~~~~~~ 672 (702)
-+++.+.+.. +..+++++.+. ....+-++.+. +.+|........+|+| ++||+ |+++|.+.-+.....
T Consensus 9 ~~~y~V~E~~---g~~~v~V~R~g--~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F-~~Get~k~i~V~I~dD~~~E~ 82 (114)
T 3e9t_A 9 PGHYTVMENC---GEFEVRVVRRG--DISTYASVEYETQDGTASAGTDFVGRKGLLSF-PPGVDEQRFRIEVIDDDVFEE 82 (114)
T ss_dssp SSEEEEETTC---CEEEEEEEEEE--CCSSCEEEEEEEECSSSCBTTTBCCCEEEEEE-CTTCCEEEEEEEBCCCSSCCC
T ss_pred CCEEEEEcCC---eEEEEEEEEEC--CCCeeEEEEEEeECCccCCCCCceEcceEEEE-eCCcEEEEEEEEEEcCCCccC
Confidence 3456676643 33444433333 22233333332 2334444444568999 66775 554444332222222
Q ss_pred CeEEEEEEEEC
Q 043420 673 NMISASLVWDD 683 (702)
Q Consensus 673 ~~~~G~~~~~~ 683 (702)
...| .|.+.+
T Consensus 83 ~E~F-~v~L~~ 92 (114)
T 3e9t_A 83 DECF-YIRLFN 92 (114)
T ss_dssp CEEE-EEEEEC
T ss_pred CEEE-EEEEEC
Confidence 2333 455554
No 76
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=24.92 E-value=2.2e+02 Score=24.47 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=35.6
Q ss_pred ccEEEEEEEEecCCCCee--------EEEEEEcCCCeEEE---------EEcCeEEEeeCCeEEEEEEEEE
Q 043420 612 TTQVFHRTVTNVGSAVST--------YRAVVYTRPGLMIK---------VQPSVLYFKSLYQKQSFVVTVT 665 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~t--------y~~~~~~~~g~~v~---------v~p~~l~~~~~g~~~~~~vt~~ 665 (702)
....++.+|+|.++.+.+ |.+.+.-..|-.|- -.-...+| ++||+++|++++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 578889999999875443 44555544554332 11234567 8999999999888
No 77
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=23.67 E-value=1.2e+02 Score=25.12 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=29.7
Q ss_pred ccEEEEEEEEecCCCCee----EEEEEEc---------CCCeEEEEEcC--eEEEeeCCeEEEEEE
Q 043420 612 TTQVFHRTVTNVGSAVST----YRAVVYT---------RPGLMIKVQPS--VLYFKSLYQKQSFVV 662 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~t----y~~~~~~---------~~g~~v~v~p~--~l~~~~~g~~~~~~v 662 (702)
+..+++.+|+|.|+.+-. |.+--.. --|+.+.+ |+ .+.| ++|+++++++
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~r~V~L 81 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNI-PAGTAVRF-EPGQKREVEL 81 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECS-STTCEEEE-CTTCEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecc-cCCCeEee-CCCCeEEEEE
Confidence 456888999999997532 2110000 12555554 43 4677 8899888654
No 78
>1otr_A Protein CUE2; protein-protein complex, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.4
Probab=21.69 E-value=83 Score=22.50 Aligned_cols=25 Identities=12% Similarity=0.335 Sum_probs=21.5
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHhcC
Q 043420 499 AAAYVKSFYPSWSPAAIKSALMTTA 523 (702)
Q Consensus 499 ~aALl~q~~P~lsp~~ik~~L~~TA 523 (702)
-+.+|.+.||+.+..+||..|...-
T Consensus 7 ~v~~L~EMFP~~~~~~ik~~L~~~~ 31 (49)
T 1otr_A 7 KLSILMDMFPAISKSKLQVHLLENN 31 (49)
T ss_dssp HHHHHHHHCSSSCHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 3568999999999999999997654
No 79
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=20.45 E-value=1.4e+02 Score=25.76 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=29.8
Q ss_pred ccEEEEEEEEecCCCCeeE----EEEEEcC---------CCeEEEEEcC--eEEEeeCCeEEEEEE
Q 043420 612 TTQVFHRTVTNVGSAVSTY----RAVVYTR---------PGLMIKVQPS--VLYFKSLYQKQSFVV 662 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~ty----~~~~~~~---------~g~~v~v~p~--~l~~~~~g~~~~~~v 662 (702)
+..+++.+|+|.|+.+-.- .+--..| -|..+.+ |+ .+.| ++|+++++++
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~k~V~L 87 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNI-PSGTAARF-EPGEEMEVEL 87 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECS-CTTCEEEE-CTTCEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccc-cCCCeEee-CCCCeEEEEE
Confidence 4567889999999975322 1100001 2555555 43 5677 8899888654
No 80
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=20.45 E-value=1.4e+02 Score=25.76 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=29.8
Q ss_pred ccEEEEEEEEecCCCCeeE----EEEEEcC---------CCeEEEEEcC--eEEEeeCCeEEEEEE
Q 043420 612 TTQVFHRTVTNVGSAVSTY----RAVVYTR---------PGLMIKVQPS--VLYFKSLYQKQSFVV 662 (702)
Q Consensus 612 ~~~t~~rtvtnvg~~~~ty----~~~~~~~---------~g~~v~v~p~--~l~~~~~g~~~~~~v 662 (702)
+..+++.+|+|.|+.+-.- .+--..| -|..+.+ |+ .+.| ++|+++++++
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRF-EPG~~k~V~L 87 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNI-PSGTAARF-EPGEEMEVEL 87 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECS-CTTCEEEE-CTTCEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccc-cCCCeEee-CCCCeEEEEE
Confidence 4567889999999975322 1100001 2555555 43 5677 8899888654
No 81
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=20.33 E-value=5.5e+02 Score=24.95 Aligned_cols=83 Identities=10% Similarity=-0.048 Sum_probs=50.0
Q ss_pred cEEEEEEEEecCCCCeeEEEEEEcCC--------CeEEEEEcCeEEEeeCCeEEEEEEEEEEeeCCCC-CeEEEEEEEEC
Q 043420 613 TQVFHRTVTNVGSAVSTYRAVVYTRP--------GLMIKVQPSVLYFKSLYQKQSFVVTVTANVGKSV-NMISASLVWDD 683 (702)
Q Consensus 613 ~~t~~rtvtnvg~~~~ty~~~~~~~~--------g~~v~v~p~~l~~~~~g~~~~~~vt~~~~~~~~~-~~~~G~~~~~~ 683 (702)
....+.+|+|.++.+-.-.+-++.-. ...+.|+|..+++ ++|+++.+.|.......+.+ +.+| +|.+.+
T Consensus 43 ~k~~sl~l~N~~~~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~~LP~DrESlf-~lnv~e 120 (257)
T 3q48_A 43 EREVTLRVSNTSGTPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKAPLPTDRESLF-WLNILE 120 (257)
T ss_dssp CSEEEEEEEECSSSCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCCCCCSSSCEEE-EEEEEE
T ss_pred CcEEEEEEEeCCCCeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCCCCCCCceeEE-EEEeee
Confidence 34577889998875433333344311 2347899999999 88999999886554323333 3333 443331
Q ss_pred ------C-C------ceEEeEEEEEec
Q 043420 684 ------G-V------HHVRSPVVAFVA 697 (702)
Q Consensus 684 ------~-~------~~v~~P~~~~~~ 697 (702)
. . -.-|+|+.+++.
T Consensus 121 IPp~~~~~~n~Lqiair~rIKLFyRP~ 147 (257)
T 3q48_A 121 VPPRDEDENNALQFSFRSRFKLFFRPS 147 (257)
T ss_dssp ECCC---------CCEEEEEEEEEECT
T ss_pred cCCCCCCCCceEEEEEEEEEEEEEecc
Confidence 1 1 245788888865
Done!