BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043421
MAETLFSKLSDDVVLNIFFKLEDDPRNWARLACVCVKFSSLVRNICWKTKCSKSIPAVVA
DLISPNSGVPPGGWSSLHKLSVCCPGLLHAGVLLENSDFGLERELGPDSDYQSCSTSAIQ
PTSTTTTAEACSSNLNSVTDCSWSLFDDLYYDTVYDKSESHDDDGGGDGSLVVEDVDKCE
VKVGGESAKKRKICRSFRSHLASGVWNLCREQGNKLLASRFRGDCLYICDWPGCLHTEEK
RNYMLFRGIFKNFKRSRVWRTINDGNRSKIDVNCAFCNCKETWDLHSAFCLRRVFGYHDD
GEPVVRAYVCENGHVSGAWTDLPLYT

High Scoring Gene Products

Symbol, full name Information P value
EID1
EMPFINDLICHER IM DUNKELROTEN LICHT 1
protein from Arabidopsis thaliana 7.9e-112
EDL1
AT5G15440
protein from Arabidopsis thaliana 1.3e-17
EDL2
AT5G39360
protein from Arabidopsis thaliana 5.6e-15
EDL3
EID1-like 3
protein from Arabidopsis thaliana 1.2e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043421
        (326 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2133259 - symbol:EID1 "EMPFINDLICHER IM DUNKEL...   678  7.9e-112  2
TAIR|locus:2180907 - symbol:EDL1 "AT5G15440" species:3702...   140  1.3e-17   2
TAIR|locus:2175668 - symbol:EDL2 "AT5G39360" species:3702...   126  5.6e-15   2
TAIR|locus:2099227 - symbol:EDL3 "EID1-like 3" species:37...   107  1.2e-09   2


>TAIR|locus:2133259 [details] [associations]
            symbol:EID1 "EMPFINDLICHER IM DUNKELROTEN LICHT 1"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0009585 "red, far-red light
            phototransduction" evidence=IMP] [GO:0004842 "ubiquitin-protein
            ligase activity" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010099 "regulation of photomorphogenesis"
            evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
            [GO:0048573 "photoperiodism, flowering" evidence=RCA;IMP]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=RCA] [GO:0032880 "regulation of protein localization"
            evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
            evidence=RCA] PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0005634
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009585 GO:GO:0048573
            GO:GO:0048366 GO:GO:0004842 GO:GO:0010099 EMBL:AL161494
            EMBL:AF069298 EMBL:BT002038 EMBL:BT008731 EMBL:AK229833
            EMBL:AY085530 IPI:IPI00516571 PIR:T01306 RefSeq:NP_192153.1
            UniGene:At.3886 UniGene:At.43977 ProteinModelPortal:Q8LEA8
            IntAct:Q8LEA8 STRING:Q8LEA8 PaxDb:Q8LEA8 PRIDE:Q8LEA8
            EnsemblPlants:AT4G02440.1 GeneID:828008 KEGG:ath:AT4G02440
            TAIR:At4g02440 eggNOG:NOG256353 HOGENOM:HOG000030777
            InParanoid:Q8LEA8 OMA:WSLYDDL PhylomeDB:Q8LEA8
            ProtClustDB:CLSN2685743 Genevestigator:Q8LEA8 GermOnline:AT4G02440
            Uniprot:Q8LEA8
        Length = 336

 Score = 678 (243.7 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
 Identities = 119/139 (85%), Positives = 127/139 (91%)

Query:   189 KKRKICRSFRSHLASGVWNLCREQGNKLLASRFRGDCLYICDWPGCLHTEEKRNYMLFRG 248
             K+RKICRS  SHLASG WNL REQGNKLLASRFRGDCLYIC+WPGC+H EEKRNYMLFRG
Sbjct:   198 KRRKICRSLGSHLASGGWNLSREQGNKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRG 257

Query:   249 IFKNFKRSRVWRTINDGNRSKID-VNCAFCNCKETWDLHSAFCLRRVFGYHDDGEPVVRA 307
             +FK+FKRSRVWRTINDGNRSK   + CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRA
Sbjct:   258 VFKDFKRSRVWRTINDGNRSKTSGLKCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRA 317

Query:   308 YVCENGHVSGAWTDLPLYT 326
             YVCENGHVSGAWT LPLYT
Sbjct:   318 YVCENGHVSGAWTALPLYT 336

 Score = 446 (162.1 bits), Expect = 7.9e-112, Sum P(2) = 7.9e-112
 Identities = 90/169 (53%), Positives = 109/169 (64%)

Query:     1 MAETLFSKLSDDVVLNIFFKLEDDPRNWARLACVCVKFSSLVRNICWKTKCSKSIPAVVA 60
             MAE++FS + +DVV NIFFKL+DDPRNWARLACVC KFSS+VRN+C KT+C  +IP V++
Sbjct:     1 MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query:    61 DLIS-PNSGV--------------PPGGWSSLHKLSVCCPGLLHAGVLLENSDFGLEREL 105
             DL+  P S                PPGGW+SL+KL+VCCPGL HAG+LLENSDFGLEREL
Sbjct:    61 DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query:   106 GPDSDYQSCXXXXXXXXXXXXXXXXXXXNLNSVTDCSWSLFDDLYYDTV 154
             GPD +                        L   T   WSL+DDLY DT+
Sbjct:   121 GPDQNLDPKPTTTDLALNDEEVSKPVGSGLE--TTSFWSLYDDLYTDTI 167


>TAIR|locus:2180907 [details] [associations]
            symbol:EDL1 "AT5G15440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL391143 UniGene:At.49023
            UniGene:At.66737 EMBL:BT014972 EMBL:AK226950 IPI:IPI00531943
            PIR:T51522 RefSeq:NP_197048.1 ProteinModelPortal:Q9LF38 SMR:Q9LF38
            EnsemblPlants:AT5G15440.1 GeneID:831397 KEGG:ath:AT5G15440
            TAIR:At5g15440 eggNOG:NOG275348 HOGENOM:HOG000238370
            InParanoid:Q9LF38 OMA:SASCVCI PhylomeDB:Q9LF38
            ProtClustDB:CLSN2687319 Genevestigator:Q9LF38 Uniprot:Q9LF38
        Length = 293

 Score = 140 (54.3 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query:     9 LSDDVVLNIFFKLEDDPRNWARLACVCVKFSSLVRNICWKTKCSKSIPAVVADLISPNSG 68
             L++DV+L +F  L  +P+  A L+CVC  F    + + WK  C    P ++ DL S  S 
Sbjct:    22 LNEDVLLLVFQHLNWNPKLVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQSSGSH 81

Query:    69 VPPGGWSSLHKLSVCCPGLLHAGV 92
                G W +L KL + C G    G+
Sbjct:    82 CIDGNWRALGKLLIYCSGCTQGGL 105

 Score = 135 (52.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
 Identities = 41/119 (34%), Positives = 57/119 (47%)

Query:   210 REQGNKLLASRFRGDCLYICDWPGCLHTE--EKRNYMLFRGIFKNFKRSRVWRTI-NDGN 266
             R  G  LL  + R D LY+CD P C H +  E+ +  LFRGIFK+F  S+V + I N   
Sbjct:   124 RTLGRSLLPPQCRTDVLYVCD-P-CEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKAV 181

Query:   267 RSKIDVNCAFCNCKETWDLHSAFCLRRVFGYHDDG-EPVVRAYVCENGHVSGAWTDLPL 324
                    C +C  K  W +  A  + +      +  E  +  +VC NGH+ G  T  PL
Sbjct:   182 PFHPSEVCPYCKAK-LWSMLQAKIIPQSACIRLEAYEDCIEYFVCLNGHLLGICTLAPL 239


>TAIR|locus:2175668 [details] [associations]
            symbol:EDL2 "AT5G39360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] PROSITE:PS50181 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB009054 HOGENOM:HOG000238370
            ProtClustDB:CLSN2687319 EMBL:AY075673 EMBL:AY133632 IPI:IPI00517595
            RefSeq:NP_198752.1 UniGene:At.43637 ProteinModelPortal:Q9FLZ8
            PaxDb:Q9FLZ8 EnsemblPlants:AT5G39360.1 GeneID:833932
            KEGG:ath:AT5G39360 TAIR:At5g39360 eggNOG:NOG297604
            InParanoid:Q9FLZ8 OMA:EDSIEYY PhylomeDB:Q9FLZ8
            Genevestigator:Q9FLZ8 Uniprot:Q9FLZ8
        Length = 249

 Score = 126 (49.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
 Identities = 28/84 (33%), Positives = 42/84 (50%)

Query:     9 LSDDVVLNIFFKLEDDPRNWARLACVCVKFSSLVRNICWKTKCSKSIPAVVADLISPNSG 68
             LS++V+  +   L  +P   A L+CVC  F  L + + WK  C    P +++DL S  S 
Sbjct:    22 LSEEVLFLMVQHLNWNPNVIATLSCVCKWFDDLAKRLLWKEFCRARAPKMMSDLQSSGSH 81

Query:    69 VPPGGWSSLHKLSVCCPGLLHAGV 92
                G W +L KL + C G    G+
Sbjct:    82 SVDGSWRALGKLLIYCSGSSKGGL 105

 Score = 123 (48.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
 Identities = 44/126 (34%), Positives = 57/126 (45%)

Query:   210 REQGNKLLASRFR-GDCLYICDWPGCLHTEEKRNYML--FRGIFKNFKRSRVWRT-INDG 265
             R  G   L  + R  D LY+ D P C H ++  +  L  FRGIFK+F  S+V +  I  G
Sbjct:   123 RTSGRSFLPPQCRTDDILYVSD-P-CEHLDQGEDGDLGFFRGIFKSFSMSKVRKLLIKKG 180

Query:   266 NRSKIDVNCAFCNCKETWDL-------HSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGA 318
                     C +C  K  W +        SA C  R+  Y D     +  YVC NGH+ G 
Sbjct:   181 TPFHPTEVCPYCKAK-LWSMLQAKMIPQSASC--RLGAYEDS----IEYYVCLNGHMLGV 233

Query:   319 WTDLPL 324
              T LPL
Sbjct:   234 CTLLPL 239


>TAIR|locus:2099227 [details] [associations]
            symbol:EDL3 "EID1-like 3" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009414 "response to water
            deprivation" evidence=IMP] [GO:0009651 "response to salt stress"
            evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
            evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
            pathway" evidence=IMP] [GO:0010029 "regulation of seed germination"
            evidence=IMP] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IMP] [GO:0006457 "protein folding"
            evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
            [GO:0009644 "response to high light intensity" evidence=RCA]
            [GO:0042542 "response to hydrogen peroxide" evidence=RCA]
            PROSITE:PS50181 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0009738 GO:GO:0009651 GO:GO:0009414 GO:GO:0010228
            GO:GO:0010029 EMBL:AL163816 HOGENOM:HOG000238370
            ProtClustDB:CLSN2687319 EMBL:AY056271 EMBL:BT020425 IPI:IPI00537861
            PIR:T48095 RefSeq:NP_567137.1 UniGene:At.26342
            ProteinModelPortal:Q93ZT5 SMR:Q93ZT5 IntAct:Q93ZT5
            EnsemblPlants:AT3G63060.1 GeneID:825481 KEGG:ath:AT3G63060
            TAIR:At3g63060 eggNOG:NOG299849 InParanoid:Q93ZT5 OMA:GNCWLAR
            PhylomeDB:Q93ZT5 Genevestigator:Q93ZT5 Uniprot:Q93ZT5
        Length = 272

 Score = 107 (42.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 41/149 (27%), Positives = 64/149 (42%)

Query:   184 GGESAKKRKICRSFRSHLASGVWNLCREQGNKLLASRFRGDCLYICDWPGCLHTEEKRNY 243
             GGES +   + +    H A       +  G   L    R D LY+ D P C H     + 
Sbjct:   113 GGESTRYFNLSQPTSGHFACES-RFSKTSGRFFLPKNCRRDLLYMSD-P-CEHQAVGGDE 169

Query:   244 ML--FRGIFKNFKRSRVWRTINDGNRSKID--VNCAFCNCKETWDLHSAFCL----RRVF 295
              L  FRG+F+ F RS+  R      ++ ++  V C +C  +  W + +A  +     R  
Sbjct:   170 HLGVFRGVFREFMRSKT-RECLVRRQAALEEKVRCPYCGGR-VWSMTAARLVPKSAARRL 227

Query:   296 GYHDDGEPVVRAYVCENGHVSGAWTDLPL 324
             G  + G   +  +VC NGH+ G    +PL
Sbjct:   228 GSREGG---LEFFVCVNGHLHGTCWLIPL 253

 Score = 96 (38.9 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
 Identities = 23/78 (29%), Positives = 38/78 (48%)

Query:    10 SDDVVLNIFFKLEDDPRNWARLACVCVKFSSLVRNICWKTKCSKSIPAVVADLISPN-SG 68
             ++ V++ +F  +  D      +A +  +F ++ R I W+  C    P +VA L   + SG
Sbjct:    36 NERVLVLVFESISWDIHTLCTIASLSRRFCAIARRILWRRLCVNRAPGMVAALSGEDPSG 95

Query:    69 VPPGGWSSLHKLSVCCPG 86
                GGW +L KL   C G
Sbjct:    96 RIDGGWHALAKLMFFCGG 113


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.465    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       287   0.00087  115 3  11 22  0.47    33
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  265 KB (2139 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.59u 0.09s 21.68t   Elapsed:  00:00:02
  Total cpu time:  21.59u 0.09s 21.68t   Elapsed:  00:00:02
  Start:  Fri May 10 02:10:09 2013   End:  Fri May 10 02:10:11 2013

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