Citrus Sinensis ID: 043429

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640------
MATELSSSPAPVLSIKHQTFATLKKPHISSLSHFLSKSHRRCNYSLSISKHSCIFRVSCQSQATDAELATRVGQDRLLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGCPFRALIFDRIIMLMKLECYPPIKCKWKNFKQVGYLSASIRSVADARVGDTITHFNRKADNLLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGQTVECSNPSLLPEPGQRRSIEEPFVKIELLTPKEYIGSLMELAQDRRGEFKEMKYFTESRASLIYELPLAEMVGDFFDQLKSRTKGYASMEYTFLGYKESQLIKLDILINGDCVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL
cccccccccccEEEccccccccccccccccEEEEEccccccccccccccccccccccccccccccHHHHccccccccccccccccccEEEEEEEccccHHHHHHHHHHHccccHHHHHHHcccccccccccccEEEccEEEEEEEEccCEEEEEccccccccccccccHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHccccccccccccccEEEEEEEEEEEEEEEEcccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccEEEEccccccccccHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEcccEEEEEEEccccEEEECcccccccccccccCCccEEEEEEccccccHHHHHHHHHHHcccccccEEccccEEEEEEEccccEEEEEcccccccccccccccccccccccccccEEEEEEEcccccccccEEEccHHHHHHHHHHHHHHHHcccccccccHHHHHcccEEEEcccccccccccccccccccccHHHHHHHHHHHcHHHHcccccccccHHHHHHHHccccccc
******************TF*TLKKP*I*SLSHFLSKSHRRCNYSLSISKHSCIFRVSCQSQATDAELATRVGQDRLLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGCPFRALIFDRIIMLMKLECYPPIKCKWKNFKQVGYLSASIRSVADARVGDTITHFNRKADNLLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGQTVECSNPSLLPEPGQRRSIEEPFVKIELLTPKEYIGSLMELAQDRRGEFKEMKYFTESRASLIYELPLAEMVGDFFDQLKSRTKGYASMEYTFLGYKESQLIKLDILINGDCVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEK***
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MATELSSSPAPVLSIKHQTFATLKKPHISSLSHFLSKSHRRCNYSLSISKHSCIFRVSCQSQATDAELATRVGQDRLLKVPASNIRNFSIIAHIDHGKSTLADKLLQMTGTVQKREMKEQFLDNMDLERERGITIKLQAARMRYVFENEPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGAEPSRVAREIEEVIGLDCTNAILCSAKEGIGINEILNAIVKRIPPPSNTAGCPFRALIFDRIIMLMKLECYPPIKCKWKNFKQVGYLSASIRSVADARVGDTITHFNRKADNLLPGYEEATPMVFCGLFPVDADQFPELRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGQTVECSNPSLLPEPGQRRSIEEPFVKIELLTPKEYIGSLMELAQDRRGEFKEMKYFTESRASLIYELPLAEMVGDFFDQLKSRTKGYASMEYTFLGYKESQLIKLDILINGDCVEPLATIVHKDKAYAVGRALTQKLKELIPRQMFKVPIQACIGSKVIASEALSAIRKDVLAKCYGGDISRKKKLLKKQAEGKKRMKAIGKVDVPQEAFMAVLKLEKEVL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Translation factor GUF1 homolog, chloroplastic Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.confidentQ9FNM5
Translation factor GUF1 homolog, chloroplastic Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.confidentA5B4D2
Translation factor GUF1 homolog, chloroplastic Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes.confidentB9F2U5

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.5.-Acting on GTP; involved in cellular and subcellular movement.probable
3.6.5.n1Elongation factor 4.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2RDO, chain 7
Confidence level:very confident
Coverage over the Query: 81-116,136-526
View the alignment between query and template
View the model in PyMOL
Template: 2YWE, chain A
Confidence level:very confident
Coverage over the Query: 81-111,135-593
View the alignment between query and template
View the model in PyMOL
Template: 2HJG, chain A
Confidence level:confident
Coverage over the Query: 5-32,45-110,125-261
View the alignment between query and template
View the model in PyMOL