BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043430
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1
Length = 542
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/264 (74%), Positives = 213/264 (80%), Gaps = 16/264 (6%)
Query: 11 PTKSSFVQPQS---QPF--------ITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEP 59
P KS VQ QS P TKP + PISA+H++DS+K P + P P
Sbjct: 14 PNKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSP 73
Query: 60 -----VLKTSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARS 114
+ V +WTV+SWKSKKALQLPEYPN+EEL+SVLKT+++FPPIVFAGEARS
Sbjct: 74 PAATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARS 133
Query: 115 LEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGR 174
LEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGR
Sbjct: 134 LEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGR 193
Query: 175 MAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLL 234
MAGQFAKPRSD FEEKNGVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLL
Sbjct: 194 MAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLL 253
Query: 235 RAFATGGYAAMQRVTQWNLDFTEH 258
RAFATGGYAAMQR+ QWNLDFTEH
Sbjct: 254 RAFATGGYAAMQRINQWNLDFTEH 277
>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 541
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/276 (70%), Positives = 216/276 (78%), Gaps = 18/276 (6%)
Query: 1 MALVGSTSITPTKSSFVQPQSQPFITKPRSN-------------IHPISAVHAADSAKPP 47
MAL +T+ S+ Q+QP ++ P N + PI+AVH++DS K P
Sbjct: 1 MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKNP 60
Query: 48 SAVKTTTKAPEPVLKTSN-----VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDD 102
TK+ P + V +W VDSWKSKKALQLPEYP++EEL SVLKT+D+
Sbjct: 61 IVSDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTIDE 120
Query: 103 FPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLM 162
FPPIVFAGEARSLEERL EAAMG+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLM
Sbjct: 121 FPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLM 180
Query: 163 FGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIR 222
FGGQMPV+KVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIR
Sbjct: 181 FGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIR 240
Query: 223 AYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
AYCQSAATLNLLRAFATGGYAAMQR+ QWNLDFTEH
Sbjct: 241 AYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEH 276
>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum tuberosum GN=SHKA PE=1 SV=2
Length = 538
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/254 (75%), Positives = 209/254 (82%), Gaps = 9/254 (3%)
Query: 10 TPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSN---- 65
+P K++F S TK + PISAVH++DS K P +K+ P +
Sbjct: 27 SPLKNAFFSNNS----TKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAP 82
Query: 66 -VGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAM 124
V +W VDSWKSKKALQLPEYPN+EEL SVLKT+D+FPPIVFAGEARSLEERL EAAM
Sbjct: 83 AVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAM 142
Query: 125 GKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRS 184
G+AFLLQGGDCAESFKEFNANNIRDTFRILLQMG VLMFGGQMPV+KVGRMAGQFAKPRS
Sbjct: 143 GRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRS 202
Query: 185 DPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAA 244
D FEEK+GVKLPSYRGDNVNGDAFD KSR PDPQRLIRAYCQSAATLNLLRAFATGGYAA
Sbjct: 203 DSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAA 262
Query: 245 MQRVTQWNLDFTEH 258
MQR+ QWNLDFTEH
Sbjct: 263 MQRINQWNLDFTEH 276
>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1
Length = 539
Score = 371 bits (952), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/229 (78%), Positives = 198/229 (86%), Gaps = 5/229 (2%)
Query: 35 ISAVHAADSAKPPSAVKTTTKAPEPVL----KTSNVGPQKWTVDSWKSKKALQLPEYPNK 90
+SAVHAAD AK V+ KA P + VG KWTVDSWK+KKALQLPEYP++
Sbjct: 38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQ 97
Query: 91 EELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDT 150
EEL+SVLKT++ FPP+VFAGEAR LEERLA+AAMG+AF+LQGGDCAESFKEFNANNIRDT
Sbjct: 98 EELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDT 157
Query: 151 FRILLQMGVVLMFGGQMPVVK-VGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFD 209
FRILLQMG VLMFGGQMPVVK VGRMAGQFAKPRSD FEE++GVKLPSYRGDN+NGD FD
Sbjct: 158 FRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFD 217
Query: 210 EKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
EKSR PDPQR+IRAY QS ATLNLLRAFATGGYAAMQRVTQWNLDF +H
Sbjct: 218 EKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDH 266
>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 511
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/240 (75%), Positives = 199/240 (82%), Gaps = 18/240 (7%)
Query: 18 QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWK 77
QP+ F T HPISAVHAA+ +K +AVK KW++DSWK
Sbjct: 27 QPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWK 68
Query: 78 SKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
+KKALQLPEYP+++ELESVLKTL+ PP+VFAGEARSLEE+L EAA+GKAFLLQGGDCAE
Sbjct: 69 TKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAE 128
Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
SFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEE NGVKLPS
Sbjct: 129 SFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPS 188
Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
Y+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRAFATGGYAAMQRVT+WNLDF E
Sbjct: 189 YKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVE 248
>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2
Length = 554
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/278 (64%), Positives = 208/278 (74%), Gaps = 24/278 (8%)
Query: 2 ALVGSTSITPTKSSFVQPQSQPFITKPRSNIHPISAVHAADSAK-PPSAVKTTTKAPEPV 60
++ G ++ P S + F+T R + AVHAA+ +K PP V + K P
Sbjct: 8 SMAGGAAVVP--RSATATTASAFVTMKRRAT-AVRAVHAAEPSKNPPVGVPSAAKTSSPS 64
Query: 61 LK--------------------TSNVGPQKWTVDSWKSKKALQLPEYPNKEELESVLKTL 100
+ T V P +W VDSW++KKALQLPEYPN ELE+VLKT+
Sbjct: 65 VAAPEKAPVAAAPAPVAPAPAATKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTI 124
Query: 101 DDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMGVV 160
+ FPPIVFAGEAR LEERLA+AAMG+AFLLQGGDCAESFKEFN NNIRDTFR+LLQM V
Sbjct: 125 EAFPPIVFAGEARHLEERLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAV 184
Query: 161 LMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDEKSRNPDPQRL 220
L FGGQMPV+KVGRMAGQFAKPRS+ FEE++GVKLPSYRGDN+NGDAF+EKSR PDPQR+
Sbjct: 185 LTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRM 244
Query: 221 IRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
+RAY QSAATLNLLRAFATGGYAAMQRVTQWNLDFT+H
Sbjct: 245 VRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQH 282
>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum tuberosum GN=SHKB PE=2 SV=1
Length = 511
Score = 362 bits (929), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/240 (74%), Positives = 198/240 (82%), Gaps = 18/240 (7%)
Query: 18 QPQSQPFITKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWK 77
QP+ F T HPISAVHAA+ +K +AVK KW++DSWK
Sbjct: 27 QPRFSLFPTTQHGRRHPISAVHAAEPSK--TAVKQG----------------KWSLDSWK 68
Query: 78 SKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
+KKALQLPEYP+++ELESVLKTL+ PP+VFAGEARSLEE+L EAA+GKAFLLQGGDCAE
Sbjct: 69 TKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAE 128
Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
SFKEFNANNIRDTFRILLQM VVLMFGGQ+PV+KVGRMAGQFAKPRSDP EE NGVKLPS
Sbjct: 129 SFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPS 188
Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
Y+GDN+NGD FDEKSR PDP RLIRAY QSAATLNLLRAFATGGYAAMQRVT+WNLDF E
Sbjct: 189 YKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVE 248
>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2
Length = 525
Score = 359 bits (921), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 172/232 (74%), Positives = 200/232 (86%), Gaps = 8/232 (3%)
Query: 26 TKPRSNIHPISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLP 85
TKP+S ++ ++AVHAA+ A+ +VK + + +S+ G KWT +SWK KKALQLP
Sbjct: 38 TKPKS-VNLVTAVHAAEPARNAVSVKES-------VASSSSGALKWTPESWKLKKALQLP 89
Query: 86 EYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKEFNAN 145
+YPN ELESVLKT++ FPPIVFAGEAR+LEERLA+AA+GKAFLLQGGDCAESFKEFNA
Sbjct: 90 DYPNANELESVLKTIEAFPPIVFAGEARNLEERLADAAVGKAFLLQGGDCAESFKEFNAT 149
Query: 146 NIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNG 205
NIRDTFR+LLQM +VL FGGQ+PV+KVGRMAGQFAKPRSD FEEK+GVKLPSY+GDN+NG
Sbjct: 150 NIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNING 209
Query: 206 DAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTE 257
D FDEKSR PDP R+IRAY QSAATLNLLRAFATGGYAA+QRVTQWNLDF E
Sbjct: 210 DTFDEKSRIPDPNRMIRAYTQSAATLNLLRAFATGGYAAIQRVTQWNLDFVE 261
>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2
Length = 507
Score = 355 bits (911), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 169/238 (71%), Positives = 198/238 (83%), Gaps = 17/238 (7%)
Query: 23 PFITKPRSNIH--PISAVHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKK 80
P+ PR I P+ AVH+ D K +T A V KW+++SWKSKK
Sbjct: 17 PYRHAPRRPISFSPVFAVHSTDPKK------STQSASASV---------KWSLESWKSKK 61
Query: 81 ALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFK 140
ALQLP+YP++++++SVL+TL FPPIVFAGEAR LE++L +AAMG+AF+LQGGDCAESFK
Sbjct: 62 ALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFK 121
Query: 141 EFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYRG 200
EFNANNIRDTFR+LLQMGVVLMFGGQ+PV+KVGRMAGQFAKPRSDPFEEK+GVKLPSYRG
Sbjct: 122 EFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRG 181
Query: 201 DNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
DN+NGDAFDEKSR PDP R++RAY QS ATLNLLRAFATGGYAAMQRV+QWNLDFT+H
Sbjct: 182 DNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATGGYAAMQRVSQWNLDFTQH 239
>sp|P80574|AROF_STRCO Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=aroH
PE=1 SV=3
Length = 450
Score = 221 bits (563), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 135/184 (73%)
Query: 74 DSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGG 133
++W+ A Q PEYP+ E L +V+ L+ +PP+VFAGE L R+A A G+AFLLQGG
Sbjct: 13 NTWRDLPAAQQPEYPDTEALRAVIADLESYPPLVFAGECDQLRARMAAVAKGEAFLLQGG 72
Query: 134 DCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGV 193
DCAE+F +A++IR+ + LLQMG VL + +PVVKVGR+AGQ++KPRS P E ++GV
Sbjct: 73 DCAEAFDAVSADHIRNKLKTLLQMGAVLTYAASVPVVKVGRIAGQYSKPRSKPTETRDGV 132
Query: 194 KLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNL 253
LP+YRGD+VNG F E +R PDP+RL R Y SA+TLNL+RAF TGGYA +++V WN
Sbjct: 133 TLPTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRAFTTGGYADLRQVHAWNQ 192
Query: 254 DFTE 257
DF +
Sbjct: 193 DFVK 196
>sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic
OS=Catharanthus roseus GN=DHS1 PE=2 SV=2
Length = 493
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 139/240 (57%), Gaps = 43/240 (17%)
Query: 27 KPRSNIHPISA-VHAADSAKPPSAVKTTTKAPEPVLKTSNVGPQKWTVDSWKSKKALQLP 85
KPRS+ PISA VH K P + T TK +L W +SWKSKKALQLP
Sbjct: 36 KPRSS-RPISAAVHVTQPPKTPISSATATKRRLSLLNGV------W--ESWKSKKALQLP 86
Query: 86 EYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESFKE---- 141
EYP++ +L+ VLKT++ FPP+VFAGEARSLEE+LA+AAMG AFLLQGGDCAESFKE
Sbjct: 87 EYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPL 146
Query: 142 ---FNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSY 198
+ N D R L FGGQ PV+KVGRMAGQFAKPR DPFEEK+G+ L
Sbjct: 147 YSRYFQNTASDECR--------LTFGGQCPVIKVGRMAGQFAKPRLDPFEEKDGLWLSGA 198
Query: 199 RGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWNLDFTEH 258
G V +A+ + + + L+ C A + + +LDF EH
Sbjct: 199 NGWPVAWEAYCKLQQLSPSRALLLVVCCYAESHPM------------------DLDFVEH 240
>sp|O53512|AROG_MYCTU Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
tuberculosis GN=aroG PE=1 SV=1
Length = 462
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 117/184 (63%), Gaps = 4/184 (2%)
Query: 73 VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQG 132
+D+ +K A Q P +P + L ++ L+ PP+ E L+E+LA+ A G+AFLLQG
Sbjct: 26 LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 84
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
GDCAE+F + +IR R LLQM VVL +G MPVVKV R+AGQ+AKPRS + +
Sbjct: 85 GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRS---ADIDA 141
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
+ L SYRGD +NG A D +R DP RL+RAY ++A +NL+RA + G A++ V WN
Sbjct: 142 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 201
Query: 253 LDFT 256
+F
Sbjct: 202 REFV 205
>sp|A0R033|AROG_MYCS2 Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=aroG PE=3
SV=1
Length = 464
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 117/184 (63%), Gaps = 4/184 (2%)
Query: 73 VDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQG 132
+DS +K A+Q P + + + +++ L+ PP+ E L+ LA+ A GKAFLLQG
Sbjct: 26 LDSALAKPAVQQPSW-DPDAAKAMRTVLESVPPVTVPSEIEKLKGLLADVAQGKAFLLQG 84
Query: 133 GDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNG 192
GDCAE+F + +IR R LLQM VVL +G MPVVKV R+AGQ+AKPRS + +
Sbjct: 85 GDCAETFVDNTEPHIRANIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRS---SDVDA 141
Query: 193 VKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQWN 252
+ L SYRGD +NG A D +R DP RL+RAY ++A +NL+RA + G A++ V +WN
Sbjct: 142 LGLKSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLMRALTSSGLASLHLVHEWN 201
Query: 253 LDFT 256
+F
Sbjct: 202 REFV 205
>sp|P80576|AROF_NEUCR Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=aro-8 PE=1 SV=2
Length = 481
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 110/183 (60%), Gaps = 2/183 (1%)
Query: 71 WTVDSWKSKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLL 130
W DSW+SK Q PEYP+K LE L PPIV E L E L + A GKAFLL
Sbjct: 12 WAPDSWRSKPIKQCPEYPDKAALEKATNELKTLPPIVLPNEIIRLREHLRDVAQGKAFLL 71
Query: 131 QGGDCAESFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEK 190
QGGDCAE F + I ++LLQM +VL++G PVV++GRMAGQ+AKPRS P E
Sbjct: 72 QGGDCAELFSYCQQDVIESKIKLLLQMSLVLLWGADKPVVRIGRMAGQYAKPRSSPVETI 131
Query: 191 NGVKLPSYRGDNVNGDAFDEKSRNPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRVTQ 250
NG ++PS+RGD +NG F R DP RL+RAY S+ATLN +R G A +
Sbjct: 132 NGKEVPSFRGDILNG--FHPDERELDPNRLVRAYQYSSATLNYIRGAIGSGIADLHGPLD 189
Query: 251 WNL 253
W L
Sbjct: 190 WGL 192
>sp|Q51789|PHZC_PSEFL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
fluorescens GN=phzC PE=3 SV=1
Length = 400
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 76/145 (52%)
Query: 80 KALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAESF 139
+ALQ P++ +L L D ++ + L LA A G+A ++Q GDCAE
Sbjct: 12 EALQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMIIQCGDCAEDM 71
Query: 140 KEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPSYR 199
E A+++ +L + Q PVV+VGR+AGQFAKPRS+ E V+LP YR
Sbjct: 72 DESAADHVTRKAALLDMLAGTFRLVTQQPVVRVGRIAGQFAKPRSNHSERIGDVELPVYR 131
Query: 200 GDNVNGDAFDEKSRNPDPQRLIRAY 224
GD VNG R D QRL+R Y
Sbjct: 132 GDMVNGRDAVLGHRQHDAQRLVRGY 156
>sp|Q51517|PHZC_PSECL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
chlororaphis GN=phzC PE=3 SV=1
Length = 400
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 75/147 (51%)
Query: 78 SKKALQLPEYPNKEELESVLKTLDDFPPIVFAGEARSLEERLAEAAMGKAFLLQGGDCAE 137
S +A Q P++ +L L D ++ + L LA A G+A ++Q GDCAE
Sbjct: 10 SCEAFQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMVIQSGDCAE 69
Query: 138 SFKEFNANNIRDTFRILLQMGVVLMFGGQMPVVKVGRMAGQFAKPRSDPFEEKNGVKLPS 197
E +++ +L + Q PVV+VGR+AGQFAKPRS+ E V+LP
Sbjct: 70 DMDESTPDHVARKAAVLDILAGTFRLVTQQPVVRVGRIAGQFAKPRSNNNERIGDVELPV 129
Query: 198 YRGDNVNGDAFDEKSRNPDPQRLIRAY 224
YRGD VNG R D QRL+R Y
Sbjct: 130 YRGDMVNGREAVCGHRQHDAQRLVRGY 156
>sp|A2Q8F7|PLPL_ASPNC Patatin-like phospholipase domain-containing protein An01g04180
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An01g04180 PE=3 SV=1
Length = 749
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 182 PRSDPFEEKNGVKLPSYRGDNVN 204
PR+DP E+ LP RGDNVN
Sbjct: 645 PRTDPLNERLDHNLPERRGDNVN 667
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 27/102 (26%)
Query: 77 KSKKALQLPEYPN------------KEELESVLKTLDD---------FPP--IVFAGEAR 113
KSK + + E PN KEE+ V++ L D PP I+F GE
Sbjct: 147 KSKAKVYIEEKPNVKLDNVAGMDEVKEEVAEVIEYLKDPARFRKLGGRPPKGILFYGEPG 206
Query: 114 SLEERLAEAAMGKAFL----LQGGDCAESFKEFNANNIRDTF 151
+ LA+A G+A + + G D E F A +RDTF
Sbjct: 207 VGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMRDTF 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,116,978
Number of Sequences: 539616
Number of extensions: 4157675
Number of successful extensions: 12090
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 12049
Number of HSP's gapped (non-prelim): 49
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)