Query 043432
Match_columns 105
No_of_seqs 106 out of 350
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 08:11:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043432.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043432hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wid_A DNA-binding protein RAV 100.0 8.6E-32 2.9E-36 183.4 13.8 97 4-103 7-107 (130)
2 4i1k_A B3 domain-containing tr 99.8 1.1E-18 3.9E-23 120.7 10.9 84 8-101 46-130 (146)
3 1yel_A AT1G16640; CESG, protei 99.7 1.1E-16 3.8E-21 104.4 9.6 82 8-100 8-90 (104)
4 1na6_A Ecorii, restriction end 96.2 0.0086 3E-07 47.0 5.8 91 8-99 18-123 (404)
5 1pqh_A Aspartate 1-decarboxyla 92.4 1.7 5.9E-05 29.4 11.1 75 12-97 29-105 (143)
6 3oug_A Aspartate 1-decarboxyla 91.5 1.9 6.6E-05 28.1 10.0 75 12-97 15-91 (114)
7 2c45_A Aspartate 1-decarboxyla 91.3 2.3 7.7E-05 28.7 8.8 78 9-97 9-88 (139)
8 1hmj_A RPB5, protein (subunit 67.5 5.6 0.00019 24.2 3.2 26 80-105 41-67 (78)
9 1yfb_A Transition state regula 67.3 5.5 0.00019 22.7 3.0 17 20-36 18-34 (59)
10 1vc3_B L-aspartate-alpha-decar 67.1 21 0.00071 22.5 6.5 47 46-97 18-64 (96)
11 2k75_A Uncharacterized protein 66.1 11 0.00039 23.4 4.6 29 47-97 41-69 (106)
12 3plx_B Aspartate 1-decarboxyla 63.9 25 0.00087 22.3 6.0 46 46-97 18-63 (102)
13 2qcp_X Cation efflux system pr 62.8 3.3 0.00011 25.0 1.5 21 85-105 51-71 (80)
14 1uhe_A Aspartate 1-decarboxyla 62.7 26 0.00089 22.1 6.0 46 46-97 17-62 (97)
15 2vb2_X Copper protein, cation 62.3 3.4 0.00012 25.4 1.5 21 85-105 59-79 (88)
16 2l66_A SSO7C4, transcriptional 59.6 12 0.00043 20.3 3.5 21 80-100 18-38 (53)
17 4ayb_H DNA-directed RNA polyme 56.9 8.5 0.00029 23.6 2.7 23 79-101 48-70 (84)
18 3o27_A Putative uncharacterize 56.6 10 0.00036 22.4 2.9 32 72-103 23-54 (68)
19 1eik_A RNA polymerase subunit 56.5 9.2 0.00032 23.1 2.7 22 79-100 42-63 (77)
20 3m7a_A Uncharacterized protein 50.3 52 0.0018 21.7 6.0 50 46-96 84-140 (140)
21 1zuy_A Myosin-5 isoform; SH3 d 49.9 13 0.00045 19.8 2.5 19 85-103 17-35 (58)
22 2pa1_A PDZ and LIM domain prot 48.7 22 0.00077 20.4 3.6 15 82-96 38-52 (87)
23 3jtz_A Integrase; four strande 48.4 21 0.00073 21.6 3.5 32 42-76 22-53 (88)
24 2lj0_A Sorbin and SH3 domain-c 48.1 14 0.00048 20.9 2.5 19 85-103 22-40 (65)
25 1jo8_A ABP1P, actin binding pr 47.9 15 0.00052 19.7 2.6 18 85-102 16-33 (58)
26 1mvf_D MAZE protein, PEMI-like 47.8 16 0.00053 21.5 2.8 20 80-99 19-38 (82)
27 2cu3_A Unknown function protei 47.5 15 0.0005 20.6 2.5 18 86-103 47-64 (64)
28 2fpe_A C-JUN-amino-terminal ki 47.1 15 0.00052 19.9 2.5 18 85-102 19-36 (62)
29 2l55_A SILB,silver efflux prot 47.0 8.1 0.00028 23.3 1.4 19 85-103 45-63 (82)
30 2k50_A Replication factor A re 46.6 48 0.0016 20.3 6.4 39 46-100 45-83 (115)
31 1ryj_A Unknown; beta/alpha pro 46.3 16 0.00053 20.9 2.6 17 87-103 54-70 (70)
32 2bzy_A CRK-like protein, CRKL 46.0 16 0.00056 20.3 2.6 19 85-103 19-37 (67)
33 2bz8_A SH3-domain kinase bindi 46.0 17 0.00057 19.5 2.5 18 85-102 17-34 (58)
34 1k4u_S Phagocyte NADPH oxidase 45.2 17 0.00059 19.7 2.5 19 85-103 21-39 (62)
35 2g6f_X RHO guanine nucleotide 44.9 18 0.0006 19.5 2.5 19 84-102 19-37 (59)
36 2nwm_A Vinexin; cell adhesion; 44.4 18 0.0006 20.2 2.5 19 85-103 17-35 (65)
37 3k2y_A Uncharacterized protein 44.3 17 0.00057 23.2 2.6 20 84-103 25-44 (109)
38 1cka_A C-CRK N-terminal SH3 do 44.2 19 0.00066 19.1 2.6 18 85-102 17-34 (57)
39 2i6v_A General secretion pathw 44.2 12 0.00041 21.9 1.9 15 81-95 30-44 (87)
40 2rcz_A Tight junction protein 44.2 33 0.0011 19.0 3.8 14 83-96 34-48 (81)
41 4dok_A Similarity to chalcone- 44.0 15 0.0005 26.0 2.6 27 78-104 128-154 (208)
42 1sem_A SEM-5; SRC-homology 3 ( 43.6 20 0.00068 19.1 2.6 19 85-103 18-36 (58)
43 1uti_A GRB2-related adaptor pr 43.2 20 0.00069 19.1 2.6 19 85-103 17-35 (58)
44 1y0m_A 1-phosphatidylinositol- 43.0 20 0.00069 19.4 2.6 19 85-103 19-37 (61)
45 1w70_A Neutrophil cytosol fact 42.8 20 0.00069 19.3 2.6 19 85-103 20-38 (60)
46 3rpf_C Molybdopterin convertin 42.7 16 0.00053 21.0 2.2 19 85-103 56-74 (74)
47 1zx6_A YPR154WP; SH3 domain, p 42.7 20 0.0007 19.1 2.6 18 85-102 18-35 (58)
48 1g2b_A Spectrin alpha chain; c 42.4 21 0.00071 19.5 2.6 19 85-103 37-55 (62)
49 2eyx_A V-CRK sarcoma virus CT1 42.3 15 0.0005 20.5 2.0 19 85-103 24-42 (67)
50 2xmf_A Myosin 1E SH3; motor pr 42.0 21 0.0007 19.2 2.5 19 84-102 20-38 (60)
51 2ebp_A SAM and SH3 domain-cont 42.0 20 0.00068 20.4 2.5 19 85-103 27-45 (73)
52 2eaq_A LIM domain only protein 41.6 14 0.00048 21.4 1.9 16 82-97 40-55 (90)
53 1tg0_A BBC1 protein, myosin ta 41.6 21 0.00072 19.8 2.6 18 85-102 23-40 (68)
54 2fpf_A C-JUN-amino-terminal ki 41.4 20 0.0007 20.0 2.5 18 85-102 22-39 (71)
55 4e6r_A Cytoplasmic protein NCK 41.4 22 0.00074 18.8 2.5 19 85-103 17-35 (58)
56 2vwf_A Growth factor receptor- 41.3 22 0.00077 18.8 2.6 18 85-102 18-35 (58)
57 2djq_A SH3 domain containing r 40.9 25 0.00085 19.4 2.8 18 85-102 23-40 (68)
58 2lcs_A NAP1-binding protein 2; 40.8 18 0.00061 20.7 2.2 18 85-102 21-38 (73)
59 1zlm_A Osteoclast stimulating 40.7 23 0.00079 18.9 2.6 18 85-102 19-36 (58)
60 1uj0_A Signal transducing adap 40.6 23 0.00078 19.2 2.6 18 85-102 21-38 (62)
61 1mi8_A DNAB intein; all beta-s 40.6 14 0.00048 24.1 2.0 18 78-98 82-99 (158)
62 1ruw_A Myosin-3 isoform, MYO3; 40.5 22 0.00074 19.7 2.5 18 85-102 19-36 (69)
63 2ew3_A SH3-containing GRB2-lik 40.4 23 0.00077 19.9 2.6 19 85-103 19-37 (68)
64 2drm_A Acanthamoeba myosin IB; 40.4 23 0.00079 18.8 2.6 18 85-102 19-36 (58)
65 2pkt_A PDZ and LIM domain prot 40.2 15 0.00052 21.4 1.9 16 81-96 38-53 (91)
66 2ak5_A RHO guanine nucleotide 40.0 23 0.00079 19.3 2.6 19 84-102 21-39 (64)
67 2dl4_A Protein STAC; SH3 domai 40.0 26 0.0009 19.4 2.8 19 84-102 22-40 (68)
68 2o9s_A Ponsin; SH3 domain, sig 39.9 23 0.00079 19.5 2.6 18 85-102 22-39 (67)
69 2p5d_A UPF0310 protein mjecl36 39.8 21 0.00072 23.6 2.7 17 79-97 31-47 (147)
70 1yn8_A NBP2, NAP1-binding prot 39.6 16 0.00056 19.4 1.8 18 85-102 17-34 (59)
71 1f0z_A THis protein; ubiquitin 39.6 15 0.0005 20.7 1.7 18 86-103 49-66 (66)
72 2j05_A RAS GTPase-activating p 39.5 23 0.0008 19.4 2.5 18 85-102 22-39 (65)
73 3id1_A Regulator of sigma E pr 38.8 16 0.00055 21.8 1.9 14 83-96 15-28 (95)
74 1ws8_A Mavicyanin; oxidized fo 38.5 18 0.00063 22.8 2.2 21 80-100 22-42 (109)
75 2dl3_A Sorbin and SH3 domain-c 38.3 25 0.00086 19.4 2.6 18 85-102 23-40 (68)
76 3ju0_A Phage integrase; four s 38.3 32 0.0011 21.6 3.3 31 43-76 23-53 (108)
77 2oaw_A Spectrin alpha chain, b 38.2 26 0.00089 18.9 2.6 18 85-102 17-34 (65)
78 1x2p_A Protein arginine N-meth 38.2 30 0.001 19.1 2.9 18 85-102 23-40 (68)
79 3e0e_A Replication protein A; 38.2 28 0.00096 21.1 3.0 33 46-96 40-72 (97)
80 2kxd_A 11-MER peptide, SH3 dom 38.1 25 0.00087 19.8 2.6 19 85-103 15-33 (73)
81 2j6f_A CD2-associated protein; 38.0 26 0.00089 19.0 2.6 15 85-99 17-31 (62)
82 2hd9_A UPF0310 protein PH1033; 38.0 23 0.00079 23.3 2.7 19 80-100 29-47 (145)
83 3ulr_B SRC substrate cortactin 37.9 27 0.00091 19.0 2.6 18 85-102 25-42 (65)
84 2vsp_A PDZ domain-containing p 37.9 17 0.00059 21.1 1.9 16 81-96 38-53 (91)
85 1dzf_A DNA-directed RNA polyme 37.8 27 0.00093 25.0 3.2 27 79-105 181-208 (215)
86 1gl5_A Tyrosine-protein kinase 37.8 27 0.00091 19.3 2.6 18 85-102 18-35 (67)
87 2f23_A Anti-cleavage anti-GREA 37.8 86 0.0029 20.6 5.7 56 43-98 84-142 (156)
88 2f5y_A Regulator of G-protein 37.8 16 0.00056 21.3 1.8 15 82-96 36-50 (91)
89 2q3g_A PDZ and LIM domain prot 37.5 18 0.0006 20.9 1.9 15 82-96 39-53 (89)
90 1tyg_B YJBS; alpha beta barrel 37.5 23 0.00077 21.5 2.4 18 86-103 70-87 (87)
91 1ue9_A Intersectin 2; beta bar 37.3 30 0.001 19.8 2.8 19 84-102 22-40 (80)
92 2uzc_A Human pdlim5, PDZ and L 37.2 18 0.00062 20.8 1.9 15 82-96 39-53 (88)
93 1xne_A Hypothetical protein PF 37.2 17 0.00058 23.3 1.8 12 86-97 33-44 (113)
94 1gcq_C VAV proto-oncogene; SH3 37.2 26 0.0009 19.4 2.5 15 85-99 26-40 (70)
95 2z0t_A Putative uncharacterize 37.1 17 0.00057 23.3 1.8 12 85-96 31-42 (109)
96 2lx7_A GAS-7, growth arrest-sp 37.1 13 0.00043 20.9 1.1 17 86-102 21-37 (60)
97 4f14_A Nebulette; SH3 domain, 37.1 28 0.00095 18.7 2.6 18 85-102 22-39 (64)
98 4glm_A Dynamin-binding protein 37.0 26 0.00091 19.3 2.5 19 85-103 29-47 (72)
99 1x2k_A OSTF1, osteoclast stimu 37.0 31 0.0011 19.0 2.8 19 84-102 22-40 (68)
100 2qjl_A URM1, ubiquitin-related 36.9 26 0.00088 21.2 2.6 19 85-103 81-99 (99)
101 2gnc_A SLIT-ROBO RHO GTPase-ac 36.8 19 0.00066 19.4 1.8 18 85-102 22-39 (60)
102 2a28_A BZZ1 protein; SH3 domai 36.8 29 0.001 18.1 2.6 16 85-100 16-31 (54)
103 2jxo_A Ezrin-radixin-moesin-bi 36.8 17 0.00059 21.4 1.8 16 81-96 44-59 (98)
104 1tuc_A Alpha-spectrin; capping 36.7 28 0.00097 19.0 2.6 18 86-103 6-23 (63)
105 1vb7_A PDZ and LIM domain 2; P 36.5 18 0.0006 21.3 1.8 14 83-96 43-56 (94)
106 1m5z_A GRIP, AMPA receptor int 36.4 18 0.00061 21.0 1.8 16 81-96 43-58 (91)
107 1b07_A Protein (proto-oncogene 36.4 27 0.00092 19.3 2.5 18 85-102 19-36 (65)
108 4esr_A Jouberin; AHI-1, AHI1, 36.4 28 0.00097 19.2 2.6 18 85-102 22-39 (69)
109 3i18_A LMO2051 protein; alpha- 36.3 18 0.00063 21.6 1.8 10 87-96 23-32 (100)
110 3c0c_A Endophilin-A2; endocyto 36.2 28 0.00096 19.6 2.6 19 85-103 29-47 (73)
111 2q5w_D Molybdopterin convertin 36.1 18 0.00061 20.6 1.7 19 85-103 59-77 (77)
112 3po0_A Small archaeal modifier 36.0 23 0.00079 20.8 2.2 19 85-103 71-89 (89)
113 3dwg_C 9.5 kDa culture filtrat 36.0 28 0.00095 20.6 2.6 19 85-103 75-93 (93)
114 2zpm_A Regulator of sigma E pr 36.0 19 0.00066 20.8 1.9 14 83-96 17-30 (91)
115 2i4s_A General secretion pathw 35.9 19 0.00066 21.7 1.9 14 82-95 49-62 (105)
116 2ed0_A ABL interactor 2; coile 35.9 27 0.00094 19.9 2.5 19 85-103 33-51 (78)
117 3cqt_A P59-FYN, proto-oncogene 35.8 28 0.00096 20.1 2.6 18 85-102 21-38 (79)
118 1csk_A C-SRC SH3 domain; phosp 35.7 29 0.001 19.3 2.6 19 84-102 26-45 (71)
119 3h0g_E DNA-directed RNA polyme 35.7 31 0.001 24.6 3.2 27 79-105 176-203 (210)
120 2fei_A CD2-associated protein; 35.7 15 0.00052 20.5 1.3 18 85-102 17-34 (65)
121 2dbk_A CRK-like protein; struc 35.6 27 0.00094 20.5 2.5 19 85-103 34-52 (88)
122 2pqh_A Spectrin alpha chain, b 35.5 29 0.00099 19.9 2.6 18 85-102 18-35 (80)
123 2w4f_A Protein LAP4; structura 35.5 19 0.00064 21.1 1.8 16 81-96 45-60 (97)
124 2he4_A Na(+)/H(+) exchange reg 35.2 19 0.00065 20.8 1.8 17 81-97 39-55 (90)
125 3ngp_A Spectrin alpha chain, b 35.1 32 0.0011 18.4 2.6 18 85-102 22-39 (62)
126 1dgs_A DNA ligase; AMP complex 34.8 24 0.00083 29.2 2.8 20 80-99 359-378 (667)
127 2eeg_A PDZ and LIM domain prot 34.7 21 0.0007 21.0 1.9 15 82-96 44-58 (94)
128 1g9o_A NHE-RF; PDZ domain, com 34.6 21 0.00071 20.6 1.9 16 81-96 38-53 (91)
129 2dmo_A Neutrophil cytosol fact 34.6 27 0.00091 19.4 2.3 19 85-103 23-41 (68)
130 2ct3_A Vinexin; SH3 domian, st 34.6 24 0.00082 19.5 2.1 19 85-103 23-41 (70)
131 3u23_A CD2-associated protein; 34.5 22 0.00075 19.2 1.8 18 85-102 23-40 (65)
132 2owo_A DNA ligase; protein-DNA 34.4 25 0.00084 29.2 2.8 20 80-99 361-380 (671)
133 1fm0_D Molybdopterin convertin 34.3 26 0.00088 20.0 2.2 19 85-103 63-81 (81)
134 2yun_A Nostrin; nitric oxide s 34.2 29 0.001 19.8 2.5 19 85-103 23-41 (79)
135 2kv8_A RGS12, regulator of G-p 34.2 18 0.00063 20.6 1.5 15 82-96 35-49 (83)
136 2ego_A General receptor for ph 34.2 21 0.00073 21.0 1.9 16 81-96 48-63 (96)
137 3khf_A Microtubule-associated 34.0 20 0.0007 21.1 1.8 15 82-96 46-60 (99)
138 2kl0_A Putative thiamin biosyn 34.0 26 0.0009 20.3 2.2 20 85-104 47-66 (73)
139 4dol_A AT1G53520, 94270-95700, 34.0 25 0.00087 24.4 2.5 24 80-103 140-163 (217)
140 2dil_A Proline-serine-threonin 33.9 33 0.0011 18.9 2.6 18 85-102 24-41 (69)
141 1zce_A Hypothetical protein AT 33.8 40 0.0014 22.9 3.4 19 80-100 38-56 (155)
142 3fcg_A F1 capsule-anchoring pr 33.7 62 0.0021 19.8 4.0 29 37-66 53-81 (90)
143 2jt4_A Cytoskeleton assembly c 33.5 34 0.0012 18.9 2.6 16 85-100 22-37 (71)
144 3ngh_A PDZ domain-containing p 33.4 22 0.00075 21.2 1.9 41 56-97 12-53 (106)
145 2v1q_A SLA1, cytoskeleton asse 33.4 35 0.0012 18.1 2.6 15 85-99 18-32 (60)
146 1jer_A Cucumber stellacyanin; 33.1 17 0.00059 24.0 1.4 20 80-99 24-43 (138)
147 3r68_A Na(+)/H(+) exchange reg 33.1 17 0.00057 21.2 1.2 16 81-96 40-55 (95)
148 2dls_A PDZ-rhogef, RHO guanine 32.9 19 0.00065 21.1 1.5 14 83-96 42-55 (93)
149 2q9v_A Membrane-associated gua 32.9 22 0.00076 20.5 1.8 14 83-96 40-54 (90)
150 2ekh_A SH3 and PX domain-conta 32.9 30 0.001 19.9 2.4 20 84-103 23-42 (80)
151 2v90_A PDZ domain-containing p 32.8 18 0.00061 21.2 1.4 16 81-96 41-56 (96)
152 1rgw_A ZAsp protein; PDZ, cyph 32.5 18 0.00062 20.6 1.3 15 82-96 37-51 (85)
153 2eeh_A PDZ domain-containing p 32.5 22 0.00074 21.1 1.7 16 81-96 47-62 (100)
154 2kku_A Uncharacterized protein 32.5 19 0.00064 24.8 1.5 18 87-104 58-75 (161)
155 2ysq_A RHO guanine nucleotide 32.5 40 0.0014 19.3 2.9 18 85-102 26-43 (81)
156 2i0n_A Class VII unconventiona 32.4 26 0.0009 20.2 2.0 19 85-103 26-44 (80)
157 3h0h_A Proto-oncogene tyrosine 32.3 36 0.0012 18.9 2.6 18 85-102 31-48 (73)
158 1wyx_A CRK-associated substrat 32.2 35 0.0012 18.8 2.5 16 85-100 19-34 (69)
159 3bpu_A Membrane-associated gua 32.1 21 0.00071 20.6 1.5 11 86-96 41-51 (88)
160 1zuu_A BZZ1 protein; SH3 domai 32.0 29 0.00098 18.4 2.0 17 85-101 17-33 (58)
161 3thk_A Spectrin alpha chain, b 31.9 37 0.0013 18.8 2.6 18 85-102 21-38 (73)
162 1vq8_T 50S ribosomal protein L 31.9 13 0.00046 24.2 0.7 22 83-104 38-59 (120)
163 1k1z_A VAV; SH3, proto-oncogen 31.8 36 0.0012 19.3 2.6 16 85-100 34-49 (78)
164 2d8j_A FYN-related kinase; SH3 31.8 27 0.00094 19.6 2.0 18 85-102 23-40 (77)
165 2vsv_A Rhophilin-2; scaffold p 31.7 24 0.00082 21.9 1.9 16 82-97 56-71 (109)
166 1x69_A Cortactin isoform A; SH 31.5 42 0.0014 19.1 2.8 18 85-102 33-50 (79)
167 1neg_A Spectrin alpha chain, b 31.4 37 0.0013 20.0 2.6 20 84-103 32-51 (83)
168 2yuo_A CIP85, RUN and TBC1 dom 31.3 38 0.0013 19.2 2.6 18 85-102 23-40 (78)
169 1x5q_A LAP4 protein; PDZ domai 31.3 24 0.00081 21.3 1.8 16 81-96 57-72 (110)
170 1whd_A RGS3, regulator of G-pr 31.3 23 0.0008 21.1 1.7 16 81-96 47-62 (100)
171 2ke9_A Caskin-2; SH3 domain, A 31.1 20 0.00069 21.1 1.3 18 85-102 35-52 (83)
172 3sfj_A TAX1-binding protein 3; 31.1 24 0.00083 20.9 1.8 16 81-96 56-71 (104)
173 1kwa_A Hcask/LIN-2 protein; PD 31.0 25 0.00084 20.5 1.8 13 84-96 40-52 (88)
174 3iuw_A Activating signal coint 31.0 29 0.00099 21.2 2.1 13 86-98 36-48 (83)
175 1oot_A Hypothetical 40.4 kDa p 30.9 40 0.0014 17.9 2.6 16 85-100 19-34 (60)
176 2edz_A PDZ domain-containing p 30.9 25 0.00085 21.4 1.8 18 80-97 48-65 (114)
177 4glx_A DNA ligase; inhibitor, 30.8 23 0.00078 28.9 2.0 20 80-99 361-380 (586)
178 1x2q_A Signal transducing adap 30.8 39 0.0013 19.7 2.7 19 85-103 33-51 (88)
179 2k9x_A Tburm1, uncharacterized 30.8 35 0.0012 21.5 2.5 19 85-103 84-102 (110)
180 2i04_A Membrane-associated gua 30.8 26 0.00088 19.9 1.8 14 83-96 38-52 (85)
181 2kjp_A Uncharacterized protein 30.5 22 0.00077 21.1 1.5 11 87-97 17-27 (91)
182 3bmb_A Regulator of nucleoside 30.4 1.1E+02 0.0037 19.6 5.7 56 43-98 55-111 (136)
183 1y7n_A Amyloid beta A4 precurs 30.4 25 0.00085 20.8 1.7 45 45-96 12-57 (90)
184 2ydl_A SH3 domain-containing k 30.4 40 0.0014 18.9 2.6 16 85-100 18-33 (69)
185 1wi2_A Riken cDNA 2700099C19; 30.4 25 0.00086 21.0 1.8 15 82-96 53-67 (104)
186 3kzd_A TIAM-1, T-lymphoma inva 30.3 27 0.00091 21.4 1.9 14 82-95 47-60 (94)
187 2pn0_A Prokaryotic transcripti 30.3 1.1E+02 0.0038 19.7 5.3 56 43-98 58-114 (141)
188 2cuc_A SH3 domain containing r 30.0 28 0.00097 19.2 1.8 16 85-100 23-38 (70)
189 2d90_A PDZ domain containing p 29.9 23 0.00079 21.0 1.5 17 81-97 41-57 (102)
190 1ujv_A Membrane associated gua 29.9 23 0.00079 21.1 1.5 14 83-96 43-56 (96)
191 2gbs_A Hypothetical protein RP 29.9 38 0.0013 22.7 2.7 19 80-100 37-55 (145)
192 3qe1_A Sorting nexin-27, G pro 29.8 26 0.00089 20.9 1.8 15 82-96 55-69 (107)
193 2pzd_A Serine protease HTRA2; 29.6 26 0.00089 21.2 1.8 14 83-96 48-61 (113)
194 3cyy_A Tight junction protein 29.6 28 0.00097 20.0 1.9 15 82-96 35-50 (92)
195 2qg1_A Multiple PDZ domain pro 29.6 27 0.00092 20.2 1.8 15 82-96 41-56 (92)
196 2k1g_A Lipoprotein SPR; soluti 29.4 17 0.00057 23.9 0.8 17 82-98 62-78 (135)
197 1nwd_B GAD, glutamate decarbox 29.4 11 0.00036 18.1 -0.1 13 75-87 14-26 (28)
198 1mfg_A ERB-B2 interacting prot 29.2 25 0.00085 20.5 1.5 10 87-96 51-60 (95)
199 2g1e_A Hypothetical protein TA 29.1 35 0.0012 19.8 2.2 19 85-103 72-90 (90)
200 2jte_A CD2-associated protein; 29.1 44 0.0015 18.0 2.6 16 85-100 22-37 (64)
201 2ega_A SH3 and PX domain-conta 29.0 28 0.00097 19.3 1.7 19 84-102 23-41 (70)
202 1q3o_A Shank1; PDZ, GKAP, pept 29.0 29 0.00098 20.9 1.9 16 81-96 56-71 (109)
203 1ihj_A INAD; intermolecular di 29.0 28 0.00096 20.4 1.8 14 83-96 50-64 (98)
204 2vwr_A Ligand of NUMB protein 28.9 28 0.00097 20.3 1.8 14 83-96 42-56 (95)
205 2fcf_A Multiple PDZ domain pro 28.9 28 0.00096 20.6 1.8 14 83-96 52-66 (103)
206 2dl8_A SLIT-ROBO RHO GTPase-ac 28.8 30 0.001 19.4 1.8 17 85-101 25-41 (72)
207 4doi_A Chalcone--flavonone iso 28.8 28 0.00097 25.2 2.1 26 76-101 143-168 (246)
208 2cre_A HEF-like protein; SH3 d 28.8 36 0.0012 18.8 2.2 16 85-100 23-38 (71)
209 2k9g_A SH3 domain-containing k 28.7 44 0.0015 18.6 2.6 16 85-100 25-40 (73)
210 1vjk_A Molybdopterin convertin 28.7 27 0.00094 21.0 1.7 19 85-103 80-98 (98)
211 3eg3_A Proto-oncogene tyrosine 28.6 45 0.0016 17.8 2.5 15 85-99 21-35 (63)
212 2edp_A Fragment, shroom family 28.6 25 0.00086 20.9 1.5 13 84-96 50-62 (100)
213 2egc_A SH3 and PX domain-conta 28.5 33 0.0011 19.5 2.0 19 84-102 24-42 (75)
214 2jil_A GRIP1 protein, glutamat 28.5 29 0.00099 20.2 1.8 14 83-96 45-59 (97)
215 3j21_U 50S ribosomal protein L 28.5 14 0.00047 24.2 0.3 22 83-104 41-62 (121)
216 1x9u_A Umecyanin; cupredoxin, 28.4 24 0.00082 22.5 1.4 20 80-99 22-41 (116)
217 3sgi_A DNA ligase; HET: DNA AM 28.3 23 0.00077 29.1 1.6 20 80-99 371-390 (615)
218 1uf1_A KIAA1526 protein; PDZ d 28.1 28 0.00097 21.6 1.8 15 82-96 58-72 (128)
219 1v5l_A PDZ and LIM domain 3; a 28.1 24 0.0008 21.1 1.3 14 83-96 42-55 (103)
220 1grj_A GREA protein; transcrip 28.0 1.1E+02 0.0038 20.1 4.9 55 43-97 87-142 (158)
221 2hj1_A Hypothetical protein; s 27.8 22 0.00074 22.1 1.1 15 84-98 70-84 (97)
222 1n7e_A AMPA receptor interacti 27.8 30 0.001 20.3 1.8 15 82-96 42-57 (97)
223 2epd_A RHO GTPase-activating p 27.7 26 0.0009 19.9 1.4 17 85-101 26-42 (76)
224 4e34_A Golgi-associated PDZ an 27.7 22 0.00074 20.4 1.1 13 83-95 42-54 (87)
225 1wgk_A Riken cDNA 2900073H19 p 27.5 35 0.0012 21.6 2.1 19 85-103 90-108 (114)
226 2cs5_A Tyrosine-protein phosph 27.4 27 0.00094 21.3 1.6 11 87-97 60-70 (119)
227 3jxo_A TRKA-N domain protein; 27.4 45 0.0015 19.0 2.5 15 86-100 59-73 (86)
228 3e17_A Tight junction protein 27.4 31 0.0011 20.0 1.8 14 83-96 34-48 (88)
229 2dnu_A RUH-061, SH3 multiple d 27.3 27 0.00094 19.4 1.4 19 84-102 23-41 (71)
230 2edv_A FERM and PDZ domain-con 27.3 21 0.00073 21.1 1.0 12 85-96 45-56 (96)
231 2opg_A Multiple PDZ domain pro 27.2 32 0.0011 20.1 1.8 14 83-96 43-57 (98)
232 2fe5_A Presynaptic protein SAP 27.2 32 0.0011 19.9 1.8 14 83-96 46-60 (94)
233 4ag1_C Fynomer; hydrolase-de n 27.2 48 0.0016 19.3 2.6 18 85-102 22-39 (84)
234 2ed1_A 130 kDa phosphatidylino 27.1 25 0.00086 20.0 1.3 17 85-101 26-42 (76)
235 2la8_A Inactivation-NO-after-p 27.1 31 0.0011 21.0 1.8 12 85-96 40-52 (106)
236 3u5e_Y L33, YL33, 60S ribosoma 27.0 18 0.00062 23.8 0.7 22 83-104 45-66 (127)
237 2jik_A Synaptojanin-2 binding 27.0 32 0.0011 20.3 1.8 15 82-96 49-64 (101)
238 2vz5_A TAX1-binding protein 3; 27.0 30 0.001 22.2 1.8 17 80-96 74-90 (139)
239 1n7t_A 99-MER peptide of densi 27.0 28 0.00096 20.7 1.5 10 87-96 59-68 (103)
240 1wie_A RIM binding protein 2; 26.8 38 0.0013 20.2 2.1 18 85-102 39-57 (96)
241 1wfv_A Membrane associated gua 26.8 31 0.0011 20.3 1.7 15 82-96 48-63 (103)
242 1wf7_A Enigma homologue protei 26.8 26 0.0009 20.8 1.4 15 82-96 41-55 (103)
243 1wh1_A KIAA1095 protein; PDZ d 26.7 33 0.0011 21.3 1.9 14 83-96 61-75 (124)
244 1uep_A Membrane associated gua 26.7 33 0.0011 20.4 1.8 13 84-96 48-61 (103)
245 2p3w_A Probable serine proteas 26.6 32 0.0011 20.8 1.8 13 84-96 49-61 (112)
246 2awx_A Synapse associated prot 26.5 33 0.0011 20.5 1.8 14 83-96 46-60 (105)
247 2kjd_A Sodium/hydrogen exchang 26.3 32 0.0011 21.2 1.8 17 81-97 44-60 (128)
248 4a17_S RPL26, 60S ribosomal pr 26.3 19 0.00066 24.0 0.7 26 79-104 39-65 (135)
249 2enm_A Sorting nexin-9; SH3-li 26.3 60 0.002 18.2 2.9 16 85-100 26-41 (77)
250 1d5g_A Human phosphatase HPTP1 26.3 35 0.0012 19.8 1.9 15 82-96 45-60 (96)
251 3pjy_A Hypothetical signal pep 26.2 1.4E+02 0.0047 19.4 6.9 26 71-96 101-126 (136)
252 2l0a_A STAM-1, signal transduc 26.2 36 0.0012 19.4 1.8 16 85-100 33-48 (72)
253 2cbp_A Cucumber basic protein; 26.2 36 0.0012 20.8 1.9 19 82-100 18-36 (96)
254 2ejy_A 55 kDa erythrocyte memb 26.1 33 0.0011 20.7 1.8 17 81-97 47-64 (97)
255 2zkr_t 60S ribosomal protein L 26.1 23 0.00077 23.9 1.0 22 83-104 44-65 (145)
256 2iwo_A Multiple PDZ domain pro 26.1 32 0.0011 21.4 1.8 16 81-96 65-80 (120)
257 1qav_A Alpha-1 syntrophin (res 26.1 24 0.00082 20.4 1.1 12 85-96 46-57 (90)
258 1uez_A KIAA1526 protein; PDZ d 26.0 25 0.00085 20.8 1.1 14 83-96 48-61 (101)
259 1u5s_A Cytoplasmic protein NCK 26.0 43 0.0015 18.5 2.2 15 85-99 22-36 (71)
260 2yuq_A Tyrosine-protein kinase 25.9 41 0.0014 19.5 2.1 17 85-101 35-51 (85)
261 3l4f_D SH3 and multiple ankyri 25.9 36 0.0012 21.6 2.0 16 82-97 77-92 (132)
262 1f56_A Plantacyanin; cupredoxi 25.8 33 0.0011 20.8 1.7 20 81-100 12-31 (91)
263 4doo_A Chalcone-flavanone isom 25.7 38 0.0013 23.4 2.2 18 86-103 138-155 (205)
264 2da9_A SH3-domain kinase bindi 25.7 48 0.0016 18.3 2.3 17 84-100 22-38 (70)
265 2yt7_A Amyloid beta A4 precurs 25.7 34 0.0012 20.3 1.8 13 85-97 53-65 (101)
266 3nfk_A Tyrosine-protein phosph 25.5 36 0.0012 20.3 1.8 16 81-96 54-71 (107)
267 2ar1_A Hypothetical protein; s 25.4 36 0.0012 23.5 1.9 19 80-100 53-71 (172)
268 1w1f_A Tyrosine-protein kinase 25.2 54 0.0018 17.7 2.4 16 85-100 23-38 (65)
269 3iz5_Y 60S ribosomal protein L 25.0 20 0.00068 24.3 0.6 26 79-104 39-65 (150)
270 2i1n_A Discs, large homolog 3; 25.0 36 0.0012 20.0 1.8 14 83-96 47-61 (102)
271 1v1c_A Obscurin; muscle, sarco 25.0 37 0.0013 20.2 1.7 19 85-103 23-41 (71)
272 2dm8_A INAD-like protein; PDZ 24.9 36 0.0012 20.6 1.8 15 82-96 55-70 (116)
273 2koj_A Partitioning defective 24.9 35 0.0012 20.4 1.7 15 82-96 51-66 (111)
274 1vae_A Rhophilin 2, rhophilin, 24.8 26 0.00087 21.7 1.1 14 83-96 49-62 (111)
275 1spk_A RSGI RUH-010, riken cDN 24.8 32 0.0011 19.1 1.4 15 85-99 24-38 (72)
276 2iwn_A Multiple PDZ domain pro 24.8 37 0.0013 19.5 1.8 15 82-96 45-60 (97)
277 1wx6_A Cytoplasmic protein NCK 24.7 62 0.0021 18.8 2.8 15 85-99 33-47 (91)
278 2cub_A Cytoplasmic protein NCK 24.7 45 0.0015 19.5 2.1 19 84-102 32-50 (88)
279 3rnj_A Brain-specific angiogen 24.7 31 0.001 19.0 1.3 14 86-99 25-38 (67)
280 2h2b_A Tight junction protein 24.6 29 0.001 20.7 1.3 11 86-96 54-64 (107)
281 1v6b_A Harmonin isoform A1; st 24.5 34 0.0012 21.1 1.6 13 83-95 57-69 (118)
282 2fne_A Multiple PDZ domain pro 24.5 37 0.0013 21.0 1.8 14 83-96 66-80 (117)
283 1x6b_A RHO guanine exchange fa 24.5 39 0.0013 19.3 1.8 15 85-99 33-47 (79)
284 2ecz_A Sorbin and SH3 domain-c 24.5 27 0.00093 19.3 1.0 16 85-100 23-38 (70)
285 3qik_A Phosphatidylinositol 3, 24.3 29 0.001 21.7 1.3 14 83-96 52-65 (101)
286 2kgt_A Tyrosine-protein kinase 24.3 36 0.0012 18.9 1.6 16 85-101 26-41 (72)
287 1um1_A KIAA1849 protein, RSGI 24.3 37 0.0013 20.4 1.7 15 82-96 48-63 (110)
288 3o46_A Maguk P55 subfamily mem 24.3 38 0.0013 19.6 1.8 13 84-96 42-55 (93)
289 2kl1_A YLBL protein; structure 24.3 30 0.001 20.5 1.3 11 87-97 21-31 (94)
290 2akk_A RP4479, PHNA-like prote 24.2 18 0.0006 21.8 0.2 14 86-99 11-24 (74)
291 2imz_A Endonuclease PI-MTUI; N 24.2 30 0.001 22.7 1.3 18 78-98 80-97 (168)
292 3eop_A Thymocyte nuclear prote 24.2 63 0.0022 22.4 3.0 19 80-100 46-64 (176)
293 1uhp_A Hypothetical protein KI 24.1 39 0.0013 20.2 1.8 13 84-96 56-68 (107)
294 3tsv_A Tight junction protein 24.1 31 0.001 21.6 1.4 15 82-96 63-77 (124)
295 1aww_A ATK, AMGX1, BPK, bruton 24.1 31 0.001 18.9 1.2 17 85-101 24-40 (67)
296 3soe_A Membrane-associated gua 24.1 33 0.0011 21.7 1.5 15 83-97 45-59 (113)
297 2d8i_A T-cell lymphoma invasio 24.1 29 0.00098 21.7 1.2 15 83-97 57-71 (114)
298 2qkv_A Inactivation-NO-after-p 24.0 27 0.00094 20.6 1.1 11 85-95 46-57 (96)
299 2gzv_A PRKCA-binding protein; 24.0 38 0.0013 20.8 1.8 16 81-96 61-77 (114)
300 2jmc_A Spectrin alpha chain, b 24.0 31 0.0011 19.7 1.3 19 85-103 7-25 (77)
301 2dbm_A SH3-containing GRB2-lik 24.0 29 0.001 19.4 1.1 18 85-102 23-40 (73)
302 1wha_A KIAA0147 protein, scrib 24.0 38 0.0013 20.2 1.7 14 84-97 52-66 (105)
303 2yup_A Vinexin; sorbin and SH3 23.9 34 0.0011 20.1 1.4 16 85-100 33-48 (90)
304 1x5n_A Harmonin; PDZ domain, u 23.9 34 0.0012 20.7 1.5 15 83-97 54-68 (114)
305 4amh_A Disks large homolog 1; 23.8 39 0.0013 20.3 1.8 13 84-96 46-59 (106)
306 2w1t_A Spovt, stage V sporulat 23.8 81 0.0028 21.7 3.6 22 80-101 20-41 (178)
307 2o2t_A Multiple PDZ domain pro 23.8 39 0.0013 20.5 1.8 15 82-96 61-76 (117)
308 3cbz_A Dishevelled-2; PDZ doma 23.7 39 0.0013 20.4 1.8 12 85-96 49-60 (108)
309 2dlu_A INAD-like protein; PDZ 23.6 38 0.0013 20.3 1.7 13 84-96 52-65 (111)
310 2yuj_A Ubiquitin fusion degrad 23.5 1.9E+02 0.0065 20.1 7.6 76 17-97 34-110 (190)
311 1s1n_A Nephrocystin 1; beta ba 23.4 27 0.00092 19.2 0.9 18 85-102 26-43 (68)
312 2yt6_A Adult MALE urinary blad 23.3 67 0.0023 19.3 2.8 19 84-102 42-60 (109)
313 2d8h_A SH3YL1 protein; SH3 dom 23.3 52 0.0018 18.7 2.2 16 85-100 33-48 (80)
314 2eei_A PDZ domain-containing p 23.2 31 0.0011 20.5 1.2 16 81-96 43-58 (106)
315 2e7k_A Maguk P55 subfamily mem 23.1 38 0.0013 19.8 1.6 14 84-97 44-57 (91)
316 2r4h_A Membrane-associated gua 23.1 43 0.0015 20.3 1.9 15 82-96 61-76 (112)
317 2l97_A HTRA, putative serine p 23.0 34 0.0012 21.7 1.4 18 24-41 4-21 (134)
318 1uit_A Human discs large 5 pro 23.0 31 0.0011 21.0 1.2 16 81-96 53-68 (117)
319 1x6g_A Megakaryocyte-associate 22.9 60 0.002 18.6 2.4 17 85-101 33-49 (81)
320 1eyq_A Chalcone-flavonone isom 22.9 42 0.0014 23.7 2.0 24 78-101 134-157 (222)
321 1ueq_A Membrane associated gua 22.8 43 0.0015 20.7 1.8 15 82-96 56-71 (123)
322 3axa_A Afadin, nectin-3, prote 22.8 42 0.0015 19.9 1.8 15 82-96 50-65 (106)
323 2djt_A Unnamed protein product 22.7 34 0.0012 20.3 1.3 15 82-96 50-65 (104)
324 2dkr_A LIN-7 homolog B; LIN-7B 22.7 31 0.0011 19.9 1.1 10 87-96 48-57 (93)
325 3h43_A Proteasome-activating n 22.6 1.2E+02 0.004 18.1 3.8 45 45-98 22-66 (85)
326 2iwq_A Multiple PDZ domain pro 22.4 42 0.0014 20.9 1.8 15 82-96 71-86 (123)
327 1ujy_A RHO guanine nucleotide 22.4 25 0.00084 19.9 0.6 18 85-102 26-43 (76)
328 3dm3_A Replication factor A; p 22.4 1.3E+02 0.0045 18.4 4.1 32 47-96 44-75 (105)
329 3i4w_A Disks large homolog 4; 22.4 34 0.0012 20.1 1.3 15 82-96 47-62 (104)
330 1uew_A Membrane associated gua 22.4 32 0.0011 20.9 1.1 11 86-96 60-70 (114)
331 1uhc_A KIAA1010 protein; beta 22.3 61 0.0021 18.3 2.4 17 85-101 29-45 (79)
332 2e63_A KIAA1787 protein; struc 22.3 42 0.0014 22.8 1.8 16 86-101 116-131 (170)
333 2v31_A Ubiquitin-activating en 22.3 40 0.0014 21.5 1.6 14 84-97 38-51 (112)
334 2wnv_C C1Q chain C, complement 22.2 29 0.001 22.1 1.0 16 86-101 95-110 (131)
335 2byg_A Channel associated prot 22.2 43 0.0015 20.6 1.8 14 83-96 67-81 (117)
336 2in0_A Endonuclease PI-MTUI; h 22.1 35 0.0012 21.6 1.4 18 82-99 81-98 (139)
337 2dl7_A KIAA0769 protein; SH3 d 22.1 72 0.0025 17.7 2.6 15 85-99 24-38 (73)
338 2dc2_A GOPC, golgi associated 22.1 31 0.001 20.7 1.0 13 84-96 50-62 (103)
339 2wnv_A C1Q chain A, complement 22.0 25 0.00085 22.5 0.6 16 86-101 96-111 (134)
340 2dlp_A KIAA1783 protein; SH3 d 22.0 41 0.0014 19.5 1.5 15 85-99 24-38 (85)
341 1q7x_A PDZ2B domain of PTP-BAS 22.0 43 0.0015 20.0 1.7 14 83-96 55-69 (108)
342 2jre_A C60-1 PDZ domain peptid 21.8 34 0.0012 20.4 1.2 15 82-96 56-71 (108)
343 2eve_A Hypothetical protein ps 21.8 72 0.0025 21.7 2.9 19 80-100 35-53 (157)
344 2kpk_A Membrane-associated gua 21.7 44 0.0015 20.9 1.7 15 82-96 55-70 (129)
345 2eno_A Synaptojanin-2-binding 21.7 46 0.0016 20.3 1.8 14 83-96 60-74 (120)
346 2eqi_A Phospholipase C, gamma 21.6 29 0.001 19.2 0.8 18 85-102 23-40 (69)
347 1a62_A RHO; transcription term 21.4 47 0.0016 21.5 1.9 18 80-97 83-100 (130)
348 1um7_A Synapse-associated prot 21.3 49 0.0017 19.7 1.9 16 82-97 51-67 (113)
349 1udl_A Intersectin 2, KIAA1256 21.1 52 0.0018 19.5 2.0 17 85-101 50-66 (98)
350 2csq_A RIM-BP2, RIM binding pr 21.0 65 0.0022 19.2 2.4 15 84-98 40-54 (97)
351 2rf0_A Mitogen-activated prote 20.9 72 0.0025 18.9 2.6 16 85-100 45-60 (89)
352 2glw_A PHS018, 92AA long hypot 20.8 81 0.0028 19.2 2.8 20 80-99 66-85 (92)
353 2p4v_A Transcription elongatio 20.8 1.6E+02 0.0054 19.5 4.5 54 43-97 86-140 (158)
354 3gt2_A Putative uncharacterize 20.8 39 0.0013 21.9 1.4 14 83-96 85-98 (142)
355 1wfg_A Regulating synaptic mem 20.7 49 0.0017 20.8 1.8 14 83-96 78-92 (131)
356 2iim_A Proto-oncogene tyrosine 20.7 76 0.0026 16.9 2.5 16 85-100 22-37 (62)
357 3idw_A Actin cytoskeleton-regu 20.6 7 0.00024 23.5 -2.1 20 79-98 40-59 (72)
358 2ehr_A INAD-like protein; PDZ 20.5 41 0.0014 20.4 1.4 14 83-96 63-77 (117)
359 2ege_A Uncharacterized protein 20.3 54 0.0018 18.5 1.8 14 85-98 30-43 (75)
360 2kxc_A Brain-specific angiogen 20.3 38 0.0013 18.6 1.1 14 85-98 23-36 (67)
361 2k2m_A EPS8-like protein 1; al 20.1 79 0.0027 17.3 2.5 15 85-99 24-38 (68)
No 1
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=99.98 E-value=8.6e-32 Score=183.39 Aligned_cols=97 Identities=30% Similarity=0.574 Sum_probs=87.4
Q ss_pred ccccceeEEEecccCCCCCCCcEEeehhhhhccCCCCCC---CCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeec-Ch
Q 043432 4 PFLMRFLFEKQLKNSDVNAAGRIVLPKKLAETYLPPVNE---KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFE-NT 79 (105)
Q Consensus 4 ~~~~~~~f~K~LT~SDv~~~~rl~iPk~~ae~~lP~l~~---~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~-gW 79 (105)
.+.+.++|+|+||+|||++.+||+||+++|++|||.++. .+++.|.++|.+ |++|+|+|+|| +++++|+|+ ||
T Consensus 7 ~~~~~~~F~K~Lt~SDv~~~~rL~iPk~~a~~~lP~~~~~~~~~~~~l~l~D~~-Gk~W~fr~~~~--~~~~~~~Lt~GW 83 (130)
T 1wid_A 7 GRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVN-GKVWRFRYSYW--NSSQSYVLTKGW 83 (130)
T ss_dssp -CCCEEEEEEECCTTTTSSSCCEEECHHHHTTTSCCCSSCCSSCCEEEEEEETT-TEEEEEEEEEE--TTTTEEEEESSH
T ss_pred CCCCcceEEEEEehHHcCCCCEEEeCHHHHHhhCCccccccCCCcEEEEEEeCC-CCEEEEEEEEE--CCCCceEEcCCh
Confidence 356788999999999999889999999999999999874 578999999995 99999999999 667889998 69
Q ss_pred HHHHhhcCCCCCCEEEEEEcCCCC
Q 043432 80 RAFIKRYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~~~g 103 (105)
..||++|+|++||+|+|+++.+++
T Consensus 84 ~~FV~~~~L~~GD~~~F~~~~~~~ 107 (130)
T 1wid_A 84 SRFVKEKNLRAGDVVSFSRSNGQD 107 (130)
T ss_dssp HHHHHHTTCCTTCEEEEEECCSSS
T ss_pred HHHHHHcCCCCCCEEEEEEecCCC
Confidence 999999999999999999987554
No 2
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=99.79 E-value=1.1e-18 Score=120.67 Aligned_cols=84 Identities=19% Similarity=0.223 Sum_probs=72.4
Q ss_pred ceeEEEecccCCCCCCCcEEeehhhhhccCCCCCCCCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeec-ChHHHHhhc
Q 043432 8 RFLFEKQLKNSDVNAAGRIVLPKKLAETYLPPVNEKAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFE-NTRAFIKRY 86 (105)
Q Consensus 8 ~~~f~K~LT~SDv~~~~rl~iPk~~ae~~lP~l~~~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~-gW~~fV~~k 86 (105)
.+.|.|+||+||+....+|.||++.|+.+||... ..+.+.|. |+.|.+++.++. . .+.|+ ||..||+++
T Consensus 46 ~P~Fvk~l~~S~v~~~~~L~IP~~Fa~~~lp~~~----~~i~L~~~--gk~W~v~~~~~~--~--~~~ls~GW~~Fv~dn 115 (146)
T 4i1k_A 46 NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGIS----GFIKVQLA--EKQWPVRCLYKA--G--RAKFSQGWYEFTLEN 115 (146)
T ss_dssp SCEEEEECCGGGSSTTCCEECCHHHHHHHCTTCC----SEEEEEET--TEEEEEEEEEET--T--EEEECTTHHHHHHHT
T ss_pred CCEEEEEECchhcCCCcEEEeCHHHHHHhCCCCC----eEEEEEEC--CcEEEEEEEEeC--C--cEEECCchHHHHHHc
Confidence 4689999999999876789999999999999764 57888898 499999999983 2 36777 799999999
Q ss_pred CCCCCCEEEEEEcCC
Q 043432 87 CLELGDYIMVYKDEL 101 (105)
Q Consensus 87 ~L~~GD~i~f~~~~~ 101 (105)
+|++||+|+|.....
T Consensus 116 ~L~~GD~cvFeli~~ 130 (146)
T 4i1k_A 116 NLGEGDVCVFELLRT 130 (146)
T ss_dssp TCCTTCEEEEEECSS
T ss_pred CCCCCCEEEEEEecC
Confidence 999999999988654
No 3
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=99.70 E-value=1.1e-16 Score=104.43 Aligned_cols=82 Identities=20% Similarity=0.337 Sum_probs=67.6
Q ss_pred ceeEEEecccCCCCCCCcEEeehhhhhccCCCCCCCCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeec-ChHHHHhhc
Q 043432 8 RFLFEKQLKNSDVNAAGRIVLPKKLAETYLPPVNEKAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFE-NTRAFIKRY 86 (105)
Q Consensus 8 ~~~f~K~LT~SDv~~~~rl~iPk~~ae~~lP~l~~~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~-gW~~fV~~k 86 (105)
.+.|-|+|+++|.. .+|.||++.++.+.|.+. ..+.++|. .|+.|.++++++ ++ .++|+ ||.+||+++
T Consensus 8 ~p~F~K~l~~~~~~--~~L~IP~~F~~~~~~~~~----~~v~L~~~-~G~~W~v~~~~~--~~--~~~l~~GW~~Fv~~~ 76 (104)
T 1yel_A 8 EVQFMKPFISEKSS--KSLEIPLGFNEYFPAPFP----ITVDLLDY-SGRSWTVRMKKR--GE--KVFLTVGWENFVKDN 76 (104)
T ss_dssp CEEEEEECCHHHHT--TCEECCHHHHTTCCCCCC----SEEEEEET-TSCEEEEEEEEE--TT--EEEECTTHHHHHHHH
T ss_pred CCCEEEEECCCCcc--ceEECCHHHHHhcCccCC----CEEEEECC-CCCEEEEEEEEE--CC--cEEEccChHHHHHHc
Confidence 35899999999843 799999999977655432 57889999 499999999987 22 36777 799999999
Q ss_pred CCCCCCEEEEEEcC
Q 043432 87 CLELGDYIMVYKDE 100 (105)
Q Consensus 87 ~L~~GD~i~f~~~~ 100 (105)
+|++||.|+|....
T Consensus 77 ~L~~GD~lvF~~~~ 90 (104)
T 1yel_A 77 NLEDGKYLQFIYDR 90 (104)
T ss_dssp TCCTTCEEEEEECS
T ss_pred CCCCCCEEEEEEcC
Confidence 99999999998754
No 4
>1na6_A Ecorii, restriction endonuclease ecorii; site-specific restriction, mutation, replication, hydrolase; 2.10A {Escherichia coli} SCOP: b.142.1.1 c.52.1.22 PDB: 3hqg_A 3hqf_A
Probab=96.19 E-value=0.0086 Score=47.00 Aligned_cols=91 Identities=14% Similarity=0.200 Sum_probs=64.7
Q ss_pred ceeEEEecccCCCCC----CCcEEeehhhhhccCCCCC---C-CCCEEEEE--EECCCCeEEEEEEEEcCC----CCCcc
Q 043432 8 RFLFEKQLKNSDVNA----AGRIVLPKKLAETYLPPVN---E-KAGFWMHL--EDMDFNKVWTFKFRFWPN----NRGRM 73 (105)
Q Consensus 8 ~~~f~K~LT~SDv~~----~~rl~iPk~~ae~~lP~l~---~-~~~~~l~~--~D~~~g~~W~fr~~~~~~----~~s~~ 73 (105)
...+.|.|++.|++. ...+.+|+.-++.+||.+. . ++.+.+.+ -|.+.. ....+++|..| +.+..
T Consensus 18 ~~v~~K~LSAnDtgatgshQ~gi~ipk~~l~~lfp~lg~~~e~~~~~~~~~~l~d~d~p-~td~~~twYn~R~~~~tRnE 96 (404)
T 1na6_A 18 YFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSHDCP-DSEARAIYYNSAHFGKTRNE 96 (404)
T ss_dssp EEEEEEECCHHHHTCC---CCCCCCCHHHHHHHCGGGCCCSSSSCEEEEEEEESSSCCC-CEEEEEEEECGGGTTSCCCE
T ss_pred chheeEEcccccCCCCCCcccccCCchHHHHHhcccCCCccccCCcceeEEEeccCCCc-eEEEEEEEecccccCCCCCc
Confidence 468999999999984 4589999976788998875 2 23344443 345433 44999999842 12345
Q ss_pred eeecCh-HHHHhhcCCCCCCEEEEEEc
Q 043432 74 YIFENT-RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 74 y~l~gW-~~fV~~k~L~~GD~i~f~~~ 99 (105)
|.|+.| ..+.=.+...+||.++|-+.
T Consensus 97 yRLt~~~~~~~~~~~a~~GDLlvia~~ 123 (404)
T 1na6_A 97 KRITRWGRGSPLQDPENTGALTLLAFK 123 (404)
T ss_dssp EEEECCCTTSGGGCGGGTTCEEEEEEE
T ss_pred eEEeecCCCCcccccCCCCCEEEEEEe
Confidence 899977 55566678899999999775
No 5
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=92.43 E-value=1.7 Score=29.44 Aligned_cols=75 Identities=11% Similarity=0.273 Sum_probs=56.4
Q ss_pred EEecccCCCCCCCcEEeehhhhhc--cCCCCCCCCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCC
Q 043432 12 EKQLKNSDVNAAGRIVLPKKLAET--YLPPVNEKAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLE 89 (105)
Q Consensus 12 ~K~LT~SDv~~~~rl~iPk~~ae~--~lP~l~~~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~ 89 (105)
.-+.|+.|+..-|.+.|..+..++ ++|. -.|.++|..+|..++ .|.+.....|+.-.|.| .-++..+
T Consensus 29 RatVT~AdL~Y~GSITID~dLldaAgIl~~------EkV~IvNvnNG~Rfe-TYvI~GerGSG~I~lNG----AAArl~~ 97 (143)
T 1pqh_A 29 RVKVTHADLHYEGTCAIDQDFLDAAGILEN------EAIDIWNVTNGKRFS-TYAIAAERGSRIISVNG----AAAHCAS 97 (143)
T ss_dssp EEECCBCCSSSCCCEEEEHHHHHHHTCCTT------CEEEEEETTTCCEEE-EEEEEECTTCCCEECCG----GGGGTCC
T ss_pred ceEEeccccccceeEEECHHHHHHcCCCCC------CEEEEEECCCCceEE-EEEEEccCCCceEEech----HHHccCC
Confidence 346799999988999999988764 4554 478999987787554 44555445567777777 5678889
Q ss_pred CCCEEEEE
Q 043432 90 LGDYIMVY 97 (105)
Q Consensus 90 ~GD~i~f~ 97 (105)
+||.|++.
T Consensus 98 ~GD~VII~ 105 (143)
T 1pqh_A 98 VGDIVIIA 105 (143)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEEE
Confidence 99999884
No 6
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=91.50 E-value=1.9 Score=28.12 Aligned_cols=75 Identities=8% Similarity=0.153 Sum_probs=55.6
Q ss_pred EEecccCCCCCCCcEEeehhhhhc--cCCCCCCCCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCC
Q 043432 12 EKQLKNSDVNAAGRIVLPKKLAET--YLPPVNEKAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLE 89 (105)
Q Consensus 12 ~K~LT~SDv~~~~rl~iPk~~ae~--~lP~l~~~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~ 89 (105)
..+.|+.|+..-|.+.|..+..++ ++|. -.|.+.+..+|..++ .|.+.....|+.-.|.| .-++..+
T Consensus 15 ratVT~a~L~Y~GSitID~~Ll~aA~i~~~------E~V~I~NvnNG~Rf~-TYvI~GerGSg~I~lNG----AAAr~~~ 83 (114)
T 3oug_A 15 YATVTGKDLFYVGSITIDSEIMKQANIIEN------EKVQVVNLNNGERLE-TYVIKGEPNSKTIALNG----PAARRCE 83 (114)
T ss_dssp EEECCEEESSCC-CEEEEHHHHHHTTCCTT------BEEEEEETTTCCEEE-EEEEEECTTSCCEEEEG----GGGGGCC
T ss_pred ceEEecccccccceEEECHHHHHHcCCCcC------CEEEEEECCCCceEE-EEEEEccCCCCEEEeCC----HHHhccC
Confidence 456799999988999999988764 4554 478999987787655 34555445567777777 5678889
Q ss_pred CCCEEEEE
Q 043432 90 LGDYIMVY 97 (105)
Q Consensus 90 ~GD~i~f~ 97 (105)
+||.|++.
T Consensus 84 ~GD~vII~ 91 (114)
T 3oug_A 84 IGDQLFII 91 (114)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEEE
Confidence 99999985
No 7
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=91.33 E-value=2.3 Score=28.72 Aligned_cols=78 Identities=10% Similarity=0.170 Sum_probs=58.1
Q ss_pred eeEEEecccCCCCCCCcEEeehhhhhc--cCCCCCCCCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhc
Q 043432 9 FLFEKQLKNSDVNAAGRIVLPKKLAET--YLPPVNEKAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRY 86 (105)
Q Consensus 9 ~~f~K~LT~SDv~~~~rl~iPk~~ae~--~lP~l~~~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k 86 (105)
.+=.-+.|+.|+..-|.+.|..+..++ ++|. -.|.+.|..+|..++ .|.+.....|+.-.|.| .-++
T Consensus 9 KIHRatVT~AdL~Y~GSITID~dLldaAgIl~~------EkV~IvNvnNG~Rfe-TYvI~GerGSG~I~lNG----AAAr 77 (139)
T 2c45_A 9 KIHRATVTCADLHYVGSVTIDADLMDAADLLEG------EQVTIVDIDNGARLV-TYAITGERGSGVIGING----AAAH 77 (139)
T ss_dssp EEEEEECCCEESSSCCEEEEEHHHHHHTTCCSS------CCEEEEETTTCCEEE-ECEEEECTTTTCEEEES----STTT
T ss_pred cccceEEeccccccceeeEECHHHHHHcCCCCC------CEEEEEECCCCceEE-EEEEEccCCCCEEEEch----HHHc
Confidence 345567899999988999999988764 4554 467899987777554 34555445567777777 5678
Q ss_pred CCCCCCEEEEE
Q 043432 87 CLELGDYIMVY 97 (105)
Q Consensus 87 ~L~~GD~i~f~ 97 (105)
..++||.|++.
T Consensus 78 l~~~GD~vII~ 88 (139)
T 2c45_A 78 LVHPGDLVILI 88 (139)
T ss_dssp TSCTTCEEEEE
T ss_pred cCCCCCEEEEE
Confidence 88999999885
No 8
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=67.51 E-value=5.6 Score=24.18 Aligned_cols=26 Identities=19% Similarity=0.253 Sum_probs=20.4
Q ss_pred HHHHhhcCCCCCCEEEEEEcCC-CCCC
Q 043432 80 RAFIKRYCLELGDYIMVYKDEL-EGSY 105 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~~-~g~~ 105 (105)
...++.-+++.||+|-+.|... .|+|
T Consensus 41 DPvar~~G~k~GdVvkI~R~S~taG~~ 67 (78)
T 1hmj_A 41 DPVIQEIGAKEGDVVRVIRKSPTAGVS 67 (78)
T ss_pred CHhhHHhCCCCCCEEEEEECCCCCCCc
Confidence 4678889999999999999644 3554
No 9
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=67.34 E-value=5.5 Score=22.71 Aligned_cols=17 Identities=41% Similarity=0.745 Sum_probs=12.9
Q ss_pred CCCCCcEEeehhhhhcc
Q 043432 20 VNAAGRIVLPKKLAETY 36 (105)
Q Consensus 20 v~~~~rl~iPk~~ae~~ 36 (105)
+++.++++||++..+.+
T Consensus 18 v~~kGqItIPkeiR~~L 34 (59)
T 1yfb_A 18 VDELGRVVIPIELRRTL 34 (59)
T ss_dssp CCTTCEEECCHHHHHHT
T ss_pred ECCCCEEEeCHHHHHHc
Confidence 44558999999887654
No 10
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=67.07 E-value=21 Score=22.49 Aligned_cols=47 Identities=9% Similarity=0.077 Sum_probs=34.1
Q ss_pred EEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEEE
Q 043432 46 FWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 46 ~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f~ 97 (105)
-.|.+.|..+|..++ .|.+..-..|+.-.|.| .-++..++||.|+++
T Consensus 18 E~V~IvNvnNG~Rf~-TYvI~GerGSG~I~lNG----AAArl~~~GD~vII~ 64 (96)
T 1vc3_B 18 EQVDIYDITNGARLT-TYALPGERGSGVIGING----AAAHLVKPGDLVILV 64 (96)
T ss_dssp CEEEEEETTTCCEEE-EECEEECTTTTCEEEEG----GGGGTCCTTCEEEEE
T ss_pred CEEEEEECCCCceEE-EEEEEccCCCCeEEEch----HHHccCCCCCEEEEE
Confidence 478999987787554 34455444567777777 567888999999884
No 11
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=66.06 E-value=11 Score=23.45 Aligned_cols=29 Identities=14% Similarity=0.138 Sum_probs=21.3
Q ss_pred EEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEEE
Q 043432 47 WMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 47 ~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f~ 97 (105)
.+.+.|. || +.+++.| +.. |++||+|.+.
T Consensus 41 ~~~l~De-TG---~I~~tlW--~~~----------------l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDD-TA---RIRISSF--GKQ----------------LQDSDVVRID 69 (106)
T ss_dssp EEEEECS-SC---EEEEEEE--SSC----------------CCTTEEEEEE
T ss_pred EEEEEcC-CC---eEEEEEE--cCc----------------cCCCCEEEEE
Confidence 5677787 67 4677888 332 8999998885
No 12
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=63.88 E-value=25 Score=22.33 Aligned_cols=46 Identities=7% Similarity=0.154 Sum_probs=33.9
Q ss_pred EEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEEE
Q 043432 46 FWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 46 ~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f~ 97 (105)
-.|.+.|..+|..++ .|.+... .|+.-.|.| .-++..++||.|+++
T Consensus 18 E~V~I~NvnNG~Rf~-TYvI~Ge-GSG~I~lNG----AAArl~~~GD~vII~ 63 (102)
T 3plx_B 18 EKVQVVNVNNGARFE-TYTIATQ-EEGVVCLNG----AAARLAEVGDKVIIM 63 (102)
T ss_dssp CEEEEEETTTCCEEE-EECEEES-STTCEEEEG----GGGGGCCTTCEEEEE
T ss_pred CEEEEEECCCCcEEE-EEEEEcC-CCCEEEeCc----HHHhccCCCCEEEEE
Confidence 478999987788655 3445544 567777777 567888999999885
No 13
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=62.81 E-value=3.3 Score=24.95 Aligned_cols=21 Identities=10% Similarity=-0.062 Sum_probs=15.5
Q ss_pred hcCCCCCCEEEEEEcCCCCCC
Q 043432 85 RYCLELGDYIMVYKDELEGSY 105 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g~~ 105 (105)
-.+|++||.|.|.-...+|.|
T Consensus 51 l~~lk~Gd~V~F~~~~~~~~~ 71 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQGNLS 71 (80)
T ss_dssp ECCCCTTCEEEEEEEEETTEE
T ss_pred hhcCCCCCEEEEEEEEeCCEE
Confidence 467999999999766555543
No 14
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=62.69 E-value=26 Score=22.07 Aligned_cols=46 Identities=7% Similarity=0.200 Sum_probs=33.1
Q ss_pred EEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEEE
Q 043432 46 FWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 46 ~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f~ 97 (105)
-.|.+.|..+|..++ .|.+..-. |+.-.|.| .-++..++||.|+++
T Consensus 17 E~V~IvNvnNG~Rfe-TYvI~Ger-SG~I~lNG----AAArl~~~GD~vII~ 62 (97)
T 1uhe_A 17 MKVEIVDVNNGERFS-TYVILGKK-RGEICVNG----AAARKVAIGDVVIIL 62 (97)
T ss_dssp CEEEEEETTTCCEEE-EECEEECS-TTCEEEEG----GGGGGCCTTCEEEEE
T ss_pred CEEEEEECCCCceEE-EEEEeecc-CCeEEEch----HHHccCCCCCEEEEE
Confidence 478999987787554 34444434 66677777 567888999999885
No 15
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=62.29 E-value=3.4 Score=25.39 Aligned_cols=21 Identities=10% Similarity=-0.062 Sum_probs=15.8
Q ss_pred hcCCCCCCEEEEEEcCCCCCC
Q 043432 85 RYCLELGDYIMVYKDELEGSY 105 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g~~ 105 (105)
-.+|++||.|.|.-...+|.|
T Consensus 59 l~~lk~Gd~V~F~~~~~~~~~ 79 (88)
T 2vb2_X 59 MSEIKTGDKVAFNFVQQGNLS 79 (88)
T ss_dssp ECCCCTTCEEEEEEEEETTEE
T ss_pred hhcCCCCCEEEEEEEEeCCEE
Confidence 478999999999776555543
No 16
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=59.62 E-value=12 Score=20.31 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=17.8
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.++.++-+|++||.+.|.-+.
T Consensus 18 k~ir~~lgi~~Gd~v~i~~~~ 38 (53)
T 2l66_A 18 AKVRQKFQIKEGDLVKVTFDE 38 (53)
T ss_dssp HHHHHHSCCCTTCEEEEEECS
T ss_pred HHHHHHcCcCCCCEEEEEEEC
Confidence 478888999999999998754
No 17
>4ayb_H DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_H 2y0s_H 2waq_H 4b1o_H 4b1p_Z 2pmz_H 3hkz_H
Probab=56.87 E-value=8.5 Score=23.57 Aligned_cols=23 Identities=13% Similarity=0.228 Sum_probs=18.9
Q ss_pred hHHHHhhcCCCCCCEEEEEEcCC
Q 043432 79 TRAFIKRYCLELGDYIMVYKDEL 101 (105)
Q Consensus 79 W~~fV~~k~L~~GD~i~f~~~~~ 101 (105)
-...++..+|+.||+|-+.|...
T Consensus 48 ~DPva~~~g~k~GdVvkI~R~S~ 70 (84)
T 4ayb_H 48 SDPVARSINAKPGDIIRIIRKSQ 70 (84)
T ss_dssp SSHHHHHHTCCTTCEEEEEEEET
T ss_pred cCHhHHhhCCCCCCEEEEEEcCC
Confidence 35678888999999999998644
No 18
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=56.60 E-value=10 Score=22.40 Aligned_cols=32 Identities=6% Similarity=0.198 Sum_probs=25.2
Q ss_pred cceeecChHHHHhhcCCCCCCEEEEEEcCCCC
Q 043432 72 RMYIFENTRAFIKRYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 72 ~~y~l~gW~~fV~~k~L~~GD~i~f~~~~~~g 103 (105)
..|.++==.+++++-++++||.+.+.-+..+|
T Consensus 23 etyYInIPaeI~kaLgIk~gD~fel~ve~kdg 54 (68)
T 3o27_A 23 TTFYLLIPKDIAEALDIKPDDTFILNMEQKDG 54 (68)
T ss_dssp CCEEEEECHHHHHHTTCCTTCCEEEEEEEETT
T ss_pred eEEEEeCcHHHHHHhCCCCCCEEEEEEecCCC
Confidence 34666634799999999999999988775555
No 19
>1eik_A RNA polymerase subunit RPB5; RPBH, OCSP, NESG, protein structure initiative, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.78.1.1
Probab=56.46 E-value=9.2 Score=23.14 Aligned_cols=22 Identities=18% Similarity=0.268 Sum_probs=18.7
Q ss_pred hHHHHhhcCCCCCCEEEEEEcC
Q 043432 79 TRAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 79 W~~fV~~k~L~~GD~i~f~~~~ 100 (105)
-...++.-+++.||+|-+.|..
T Consensus 42 ~DPvar~~G~k~GdVvkI~R~S 63 (77)
T 1eik_A 42 TDPVAKAIGAKRGDIVKIIRKS 63 (77)
T ss_dssp TSHHHHGGGCCTTCEEEEEEEE
T ss_pred cCHhhHHhCCCCCCEEEEEECC
Confidence 3578899999999999999864
No 20
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=50.35 E-value=52 Score=21.72 Aligned_cols=50 Identities=14% Similarity=0.198 Sum_probs=28.2
Q ss_pred EEEEEEECCCCeEEEEEEEEcCCC-------CCcceeecChHHHHhhcCCCCCCEEEE
Q 043432 46 FWMHLEDMDFNKVWTFKFRFWPNN-------RGRMYIFENTRAFIKRYCLELGDYIMV 96 (105)
Q Consensus 46 ~~l~~~D~~~g~~W~fr~~~~~~~-------~s~~y~l~gW~~fV~~k~L~~GD~i~f 96 (105)
+.|.+.|.+ |+.=...-.-.+.. .+-.|+|+==...+.+.++++||.|.+
T Consensus 84 LDiiFid~d-g~Vv~i~~~~~P~~~~~~~s~~~a~~VLEl~aG~~~~~gi~~Gd~v~~ 140 (140)
T 3m7a_A 84 LDIIFVGLD-RRVMNIAANAVPYDETPLPAAGPTLAVLEINGGLAARLGIKPGDKVEW 140 (140)
T ss_dssp EEEEEECTT-SBEEEEEEEECTTCCCCEEEEEECSEEEEEETTHHHHHTCCTTCEEEC
T ss_pred eEEEEECCC-CeEEEEEccCCCCcCCCCCCCCcccEEEEeCcChHHHcCCCCCCEEeC
Confidence 555666663 55544432111111 123589991123457899999999864
No 21
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=49.92 E-value=13 Score=19.78 Aligned_cols=19 Identities=32% Similarity=0.511 Sum_probs=14.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 17 eLs~~~Gd~i~v~~~~~~g 35 (58)
T 1zuy_A 17 ELPLKKGDVIYITREEPSG 35 (58)
T ss_dssp BCCBCTTCEEEEEEECTTS
T ss_pred cCCCCCCCEEEEEEecCCC
Confidence 4568999999998765443
No 22
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=48.72 E-value=22 Score=20.37 Aligned_cols=15 Identities=33% Similarity=0.264 Sum_probs=11.5
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+.+.+|++||.|+=
T Consensus 38 pA~~aGL~~GD~I~~ 52 (87)
T 2pa1_A 38 KAKDADLRPGDIIVA 52 (87)
T ss_dssp HHHHTTCCTTCEEEE
T ss_pred hHHHcCCCCCCEEEE
Confidence 345678999999874
No 23
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=48.39 E-value=21 Score=21.56 Aligned_cols=32 Identities=13% Similarity=0.383 Sum_probs=21.8
Q ss_pred CCCCEEEEEEECCCCeEEEEEEEEcCCCCCcceee
Q 043432 42 EKAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIF 76 (105)
Q Consensus 42 ~~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l 76 (105)
+..|..|.|.-. +.+.|.|+|++- ++.+..-|
T Consensus 22 Dg~GL~L~V~ps-G~K~w~~ryr~~--Gk~~~~~L 53 (88)
T 3jtz_A 22 DSHGLYLLVKPG-GSRHWYLKYRIS--GKESRIAL 53 (88)
T ss_dssp CSTTEEEEECTT-SCEEEEEEEEET--TEEEEEEE
T ss_pred cCCceEEEEecC-CCEEEEEEEEeC--CeEEEEEe
Confidence 457888888755 579999999863 55444333
No 24
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=48.13 E-value=14 Score=20.94 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=14.6
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+....+.|
T Consensus 22 ELs~~~Gd~i~v~~~~~~g 40 (65)
T 2lj0_A 22 ELELRDGDIVDVMEKCDDG 40 (65)
T ss_dssp BCCBCTTCEEEEEEECTTS
T ss_pred CcCCCCCCEEEEeEeCCCC
Confidence 5679999999998765443
No 25
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=47.94 E-value=15 Score=19.65 Aligned_cols=18 Identities=11% Similarity=-0.047 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 16 eLs~~~Gd~i~v~~~~~~ 33 (58)
T 1jo8_A 16 ELTFVENDKIINIEFVDD 33 (58)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CcccCCCCEEEEEEecCC
Confidence 456899999999886444
No 26
>1mvf_D MAZE protein, PEMI-like protein 1; plasmid addiction, camel antibody, addiction antidote, immun; 1.65A {Escherichia coli} SCOP: b.129.1.1 PDB: 1ub4_C
Probab=47.80 E-value=16 Score=21.52 Aligned_cols=20 Identities=10% Similarity=0.175 Sum_probs=17.8
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
.+++++.+|.+||.|.+..+
T Consensus 19 k~~~~~lgl~~gd~v~i~~~ 38 (82)
T 1mvf_D 19 ATLMQALNLNIDDEVKIDLV 38 (82)
T ss_dssp HHHHHHTTCCTTCBEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEEE
Confidence 58899999999999999775
No 27
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=47.54 E-value=15 Score=20.58 Aligned_cols=18 Identities=28% Similarity=0.130 Sum_probs=14.1
Q ss_pred cCCCCCCEEEEEEcCCCC
Q 043432 86 YCLELGDYIMVYKDELEG 103 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~~g 103 (105)
..|+.||.|.|..-..+|
T Consensus 47 ~~L~dgD~v~i~~~V~GG 64 (64)
T 2cu3_A 47 RPLRDGDVVEVVALMQGG 64 (64)
T ss_dssp CCCCTTCEEEEEECCCC-
T ss_pred cCCCCCCEEEEEeecccC
Confidence 469999999999866554
No 28
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=47.06 E-value=15 Score=19.95 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=13.5
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+......
T Consensus 19 eLs~~~Gd~i~v~~~~~~ 36 (62)
T 2fpe_A 19 ELELEVDDPLLVELQAED 36 (62)
T ss_dssp BCCBCTTCEEEEEEECTT
T ss_pred cCcCCCCCEEEEEEecCC
Confidence 456899999999765443
No 29
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=47.01 E-value=8.1 Score=23.32 Aligned_cols=19 Identities=16% Similarity=-0.046 Sum_probs=13.7
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
-.+|++||.|.|.-...+|
T Consensus 45 l~~lk~Gd~V~F~~~~~~~ 63 (82)
T 2l55_A 45 PQGLKAGDRVAFSFRLDPH 63 (82)
T ss_dssp CSSCSTTCEEEEEEEEETT
T ss_pred hhcCCCCCEEEEEEEECCC
Confidence 3679999999996654433
No 30
>2k50_A Replication factor A related protein; uncharacterized protein, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=46.59 E-value=48 Score=20.26 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=27.0
Q ss_pred EEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEEEEcC
Q 043432 46 FWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 46 ~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f~~~~ 100 (105)
..+.+.|. +| ..++++| +... | ....|++||+|.|.-..
T Consensus 45 ~~~~l~D~-TG---~I~~t~w--~~~~------~----~~~~l~~G~vv~i~g~~ 83 (115)
T 2k50_A 45 ANVIIADD-TG---ELRAVFW--TENI------K----LLKKFREGDVIRIKDVN 83 (115)
T ss_dssp EEEEEEET-TE---EEEEEEE--TTGG------G----GGGTCCTTSEEEEEEEE
T ss_pred EEEEEEeC-CC---eEEEEEe--Cchh------h----hhhcCCCCCEEEEEeeE
Confidence 56778898 67 6788899 4331 1 12579999999986543
No 31
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=46.31 E-value=16 Score=20.92 Aligned_cols=17 Identities=29% Similarity=0.200 Sum_probs=14.2
Q ss_pred CCCCCCEEEEEEcCCCC
Q 043432 87 CLELGDYIMVYKDELEG 103 (105)
Q Consensus 87 ~L~~GD~i~f~~~~~~g 103 (105)
.|+.||.|.|+.-.++|
T Consensus 54 ~L~~gD~V~ii~~V~GG 70 (70)
T 1ryj_A 54 EIFDGDIIEVIRVIYGG 70 (70)
T ss_dssp BCCTTCEEEEEECTTCC
T ss_pred cCCCCCEEEEEeccccC
Confidence 79999999999866655
No 32
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=46.00 E-value=16 Score=20.26 Aligned_cols=19 Identities=32% Similarity=0.597 Sum_probs=14.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 19 eLsf~~Gd~i~v~~~~~~~ 37 (67)
T 2bzy_A 19 ALALEVGDIVKVTRMNING 37 (67)
T ss_dssp BCCBCTTCEEEEEEECSSS
T ss_pred ccccCCCCEEEEEEecCCC
Confidence 4568999999998765443
No 33
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=45.99 E-value=17 Score=19.51 Aligned_cols=18 Identities=17% Similarity=0.294 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 17 eLs~~~Gd~i~v~~~~~~ 34 (58)
T 2bz8_A 17 ELTISVGEIITNIRKEDG 34 (58)
T ss_dssp BCCBCTTCEEEEEECCTT
T ss_pred EeeECCCCEEEEEEeCCC
Confidence 456899999999886544
No 34
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=45.17 E-value=17 Score=19.73 Aligned_cols=19 Identities=26% Similarity=0.298 Sum_probs=14.5
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 21 eLs~~~Gd~i~v~~~~~~~ 39 (62)
T 1k4u_S 21 DLEFQEGDIILVLSKVNEE 39 (62)
T ss_dssp BCCBCSSCEEEEEEESSSS
T ss_pred CccCCCCCEEEEEEeCCCC
Confidence 4568999999998865443
No 35
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=44.87 E-value=18 Score=19.47 Aligned_cols=19 Identities=26% Similarity=0.270 Sum_probs=14.3
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+......
T Consensus 19 ~eLs~~~Gd~i~v~~~~~~ 37 (59)
T 2g6f_X 19 DELSFSKGDVIHVTRVEEG 37 (59)
T ss_dssp TBCCBCTTCEEEEEEECTT
T ss_pred CCcCCCCCCEEEEEEecCC
Confidence 3556899999999876444
No 36
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=44.41 E-value=18 Score=20.21 Aligned_cols=19 Identities=21% Similarity=0.343 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+.....+|
T Consensus 17 eLs~~~Gd~i~v~~~~~~~ 35 (65)
T 2nwm_A 17 ELTLQKGDIVYIHKEVDKN 35 (65)
T ss_dssp BCCBCTTCEEEEEECCTTT
T ss_pred ccCCcCCCEEEEEEecCCC
Confidence 4568999999998765443
No 37
>3k2y_A Uncharacterized protein LP_0118; nucleic acid binding,zinc ION binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Lactobacillus plantarum}
Probab=44.34 E-value=17 Score=23.18 Aligned_cols=20 Identities=10% Similarity=0.172 Sum_probs=16.7
Q ss_pred hhcCCCCCCEEEEEEcCCCC
Q 043432 84 KRYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~g 103 (105)
..+.|++||.|.|.|+.+|-
T Consensus 25 ~~~~L~~Ge~l~L~rEp~N~ 44 (109)
T 3k2y_A 25 TLTTLRVGMAVLLQRESGNQ 44 (109)
T ss_dssp HTTSCCTTCEEEEEECTTCS
T ss_pred hhhcCCCCCEEEEEECCCCc
Confidence 34689999999999997763
No 38
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=44.23 E-value=19 Score=19.10 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 17 eLs~~~Gd~i~v~~~~~~ 34 (57)
T 1cka_A 17 DLPFKKGDILRIRDKPEE 34 (57)
T ss_dssp BCCBCTTCEEEEEECSSS
T ss_pred CCCCCCCCEEEEEEecCC
Confidence 456899999999886544
No 39
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=44.19 E-value=12 Score=21.86 Aligned_cols=15 Identities=20% Similarity=0.335 Sum_probs=11.8
Q ss_pred HHHhhcCCCCCCEEE
Q 043432 81 AFIKRYCLELGDYIM 95 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~ 95 (105)
....+.+|++||+|+
T Consensus 30 s~A~~aGl~~GD~I~ 44 (87)
T 2i6v_A 30 VLFESIGLQDGDMAV 44 (87)
T ss_dssp HHHHHTTCCTTCEEE
T ss_pred CHHHHCCCCCCCEEE
Confidence 345567999999986
No 40
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=44.15 E-value=33 Score=18.98 Aligned_cols=14 Identities=21% Similarity=0.354 Sum_probs=9.8
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 34 A~~aG~l~~GD~I~~ 48 (81)
T 2rcz_A 34 AARDGNIQEGDVVLK 48 (81)
T ss_dssp HHHHSSCCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 33446 999999864
No 41
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=43.99 E-value=15 Score=25.96 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=21.1
Q ss_pred ChHHHHhhcCCCCCCEEEEEEcCCCCC
Q 043432 78 NTRAFIKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 78 gW~~fV~~k~L~~GD~i~f~~~~~~g~ 104 (105)
.-.++.++..|++||.|.|.|....|.
T Consensus 128 ~f~~~F~~~~~~~G~~I~~~~~p~~G~ 154 (208)
T 4dok_A 128 KVVGFFQSKYFKANSVITYHFSAKDGI 154 (208)
T ss_dssp HHHHHHHTCEECTTCEEEEEECSSSCC
T ss_pred HHHHHhccCCCCCCCEEEEEEeCCCCe
Confidence 345566777899999999999877663
No 42
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=43.62 E-value=20 Score=19.07 Aligned_cols=19 Identities=16% Similarity=0.291 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+......|
T Consensus 18 eLs~~~Gd~i~v~~~~~~~ 36 (58)
T 1sem_A 18 ELAFKRGDVITLINKDDPN 36 (58)
T ss_dssp BCCBCTTCEEEEEECSSSS
T ss_pred CcCCCCCCEEEEEEecCCC
Confidence 4568999999998865443
No 43
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=43.19 E-value=20 Score=19.09 Aligned_cols=19 Identities=11% Similarity=0.169 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+......|
T Consensus 17 eLs~~~Gd~i~v~~~~~~~ 35 (58)
T 1uti_A 17 ELGFRSGEVVEVLDSSNPS 35 (58)
T ss_dssp BCCBCTTCEEEEEECCSSS
T ss_pred CCCCCCCCEEEEEEECCCC
Confidence 4568999999998864443
No 44
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=42.97 E-value=20 Score=19.36 Aligned_cols=19 Identities=11% Similarity=0.072 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 19 eLs~~~Gd~i~v~~~~~~~ 37 (61)
T 1y0m_A 19 ELTFTKSAIIQNVEKQDGG 37 (61)
T ss_dssp BCCBCTTCEEEEEECCSSS
T ss_pred CcCCcCCCEEEEEEecCCC
Confidence 5668999999998864443
No 45
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=42.78 E-value=20 Score=19.33 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=14.5
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 20 eLs~~~Gd~i~v~~~~~~~ 38 (60)
T 1w70_A 20 ELNFKAGDVIFLLSRINKD 38 (60)
T ss_dssp BCCBCTTCEEEEEEECSSS
T ss_pred CccCCCCCEEEEEEeCCCC
Confidence 4668999999998865443
No 46
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=42.73 E-value=16 Score=21.00 Aligned_cols=19 Identities=26% Similarity=0.216 Sum_probs=15.1
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|+.-..+|
T Consensus 56 ~~~l~~gDeV~i~PpvsGG 74 (74)
T 3rpf_C 56 NTPLKDGDVISLLPPVCGG 74 (74)
T ss_dssp TCCCCTTCEEEEECCBCCC
T ss_pred CcCCCCCCEEEEECCCCCC
Confidence 4579999999999865554
No 47
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=42.67 E-value=20 Score=19.11 Aligned_cols=18 Identities=17% Similarity=0.187 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 18 eLs~~~Gd~i~v~~~~~~ 35 (58)
T 1zx6_A 18 DLGLKPGDKVQLLEKLSP 35 (58)
T ss_dssp BCCBCTTCEEEEEEECSS
T ss_pred CccCCCCCEEEEEEecCC
Confidence 456899999999876444
No 48
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=42.36 E-value=21 Score=19.47 Aligned_cols=19 Identities=11% Similarity=0.261 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+....+.|
T Consensus 37 eLsf~~Gd~i~v~~~~~~~ 55 (62)
T 1g2b_A 37 EVTMKKGDILTLLNSTNKD 55 (62)
T ss_dssp BCCBCTTCEEEEEECCSSS
T ss_pred ccCCCCCCEEEEEEecCCC
Confidence 4568999999998865443
No 49
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=42.27 E-value=15 Score=20.51 Aligned_cols=19 Identities=32% Similarity=0.539 Sum_probs=14.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+.....+|
T Consensus 24 eLs~~~Gd~i~v~~~~~~g 42 (67)
T 2eyx_A 24 ALALEVGELVKVTKINVSG 42 (67)
T ss_dssp BCCBCSSEEEEEEEECTTS
T ss_pred ccccCCCCEEEEEEecCCC
Confidence 4568999999998765443
No 50
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=42.03 E-value=21 Score=19.25 Aligned_cols=19 Identities=16% Similarity=0.300 Sum_probs=14.4
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+.....+
T Consensus 20 ~eLs~~~Gd~i~v~~~~~~ 38 (60)
T 2xmf_A 20 DELSFNANDIIDIIKEDPS 38 (60)
T ss_dssp TBCCBCTTCEEEEEEECTT
T ss_pred CCcCCCCCCEEEEEEecCC
Confidence 3566899999999886544
No 51
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=41.96 E-value=20 Score=20.43 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+......|
T Consensus 27 eLs~~~Gd~i~v~~~~~~g 45 (73)
T 2ebp_A 27 SLKLKKGDIIDIISKPPMG 45 (73)
T ss_dssp BCCBCSSCEEEEEECCSSS
T ss_pred ccCCCCCCEEEEEEeCCCC
Confidence 4568999999998865443
No 52
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=41.64 E-value=14 Score=21.41 Aligned_cols=16 Identities=19% Similarity=0.098 Sum_probs=11.8
Q ss_pred HHhhcCCCCCCEEEEE
Q 043432 82 FIKRYCLELGDYIMVY 97 (105)
Q Consensus 82 fV~~k~L~~GD~i~f~ 97 (105)
-+...+|++||.|+=.
T Consensus 40 pA~~aGl~~GD~I~~i 55 (90)
T 2eaq_A 40 PAEFSQLQVDDEIIAI 55 (90)
T ss_dssp HHHHTTCCTTCEEEEE
T ss_pred hHHHcCCCCCCEEEEE
Confidence 3455689999999743
No 53
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=41.55 E-value=21 Score=19.79 Aligned_cols=18 Identities=22% Similarity=0.086 Sum_probs=13.6
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 23 eLsf~~Gd~i~v~~~~~~ 40 (68)
T 1tg0_A 23 DLNFEKDQEIIVTSVEDA 40 (68)
T ss_dssp BCCBCTTCEEEEEEECSS
T ss_pred CCCCCCCCEEEEEEecCC
Confidence 456899999999875443
No 54
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=41.43 E-value=20 Score=20.02 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=13.6
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+......
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (71)
T 2fpf_A 22 ELELEVDDPLLVELQAED 39 (71)
T ss_dssp BCCBCTTCEEEEEEECTT
T ss_pred cccCcCCcEEEEeEecCC
Confidence 456899999999765443
No 55
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=41.42 E-value=22 Score=18.82 Aligned_cols=19 Identities=21% Similarity=0.336 Sum_probs=14.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||.|.+......|
T Consensus 17 eLs~~~Gd~i~v~~~~~~~ 35 (58)
T 4e6r_A 17 ELSLVXGSRVTVMEXCSDG 35 (58)
T ss_dssp BCCBCTTCEEEEEEECTTS
T ss_pred EeeEeCCCEEEEeEcCCCC
Confidence 3578999999998765443
No 56
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=41.26 E-value=22 Score=18.84 Aligned_cols=18 Identities=22% Similarity=0.359 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 18 eLs~~~Gd~i~v~~~~~~ 35 (58)
T 2vwf_A 18 ELGFRRGDFIHVMDNSDP 35 (58)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CcCCCCCCEEEEEEcCCC
Confidence 566899999999886444
No 57
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=40.91 E-value=25 Score=19.41 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=14.0
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (68)
T 2djq_A 23 DLKFNKGDVILLRRQLDE 40 (68)
T ss_dssp CCCCCTTCEEEEEECCCS
T ss_pred CccCCCCCEEEEEEecCC
Confidence 556899999999876444
No 58
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=40.79 E-value=18 Score=20.66 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+.....+
T Consensus 21 eLs~~~Gd~i~v~~~~~~ 38 (73)
T 2lcs_A 21 ELRLAEGDIVFISYKHGQ 38 (73)
T ss_dssp BCCBCTTCEEEEEEEETT
T ss_pred ccCCcCCCEEEEEEEcCC
Confidence 456899999999776444
No 59
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=40.75 E-value=23 Score=18.88 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 19 eLs~~~Gd~i~v~~~~~~ 36 (58)
T 1zlm_A 19 ELYFEEGDIIYITDMSDT 36 (58)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CccCCCCCEEEEEEeCCC
Confidence 556899999999876443
No 60
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=40.65 E-value=23 Score=19.23 Aligned_cols=18 Identities=22% Similarity=0.348 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 21 eLs~~~Gd~i~v~~~~~~ 38 (62)
T 1uj0_A 21 ELTFKHGELITVLDDSDA 38 (62)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CcCCCCCCEEEEEEeCCC
Confidence 466899999999886443
No 61
>1mi8_A DNAB intein; all beta-strands, hydrolase; 2.00A {Synechocystis SP} SCOP: b.86.1.2
Probab=40.63 E-value=14 Score=24.13 Aligned_cols=18 Identities=17% Similarity=0.036 Sum_probs=15.5
Q ss_pred ChHHHHhhcCCCCCCEEEEEE
Q 043432 78 NTRAFIKRYCLELGDYIMVYK 98 (105)
Q Consensus 78 gW~~fV~~k~L~~GD~i~f~~ 98 (105)
|| +++..|++||.|.+.+
T Consensus 82 gw---~~a~~L~~GD~v~~~~ 99 (158)
T 1mi8_A 82 GW---KRLDELSLKEHIALPR 99 (158)
T ss_dssp EE---EEGGGCCTTCEEEEEC
T ss_pred CC---EEhhhCCCCCEEEecc
Confidence 57 7899999999998865
No 62
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=40.47 E-value=22 Score=19.73 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+.....+
T Consensus 19 eLs~~~Gd~i~v~~~~~~ 36 (69)
T 1ruw_A 19 ELPLKKGDIVFISRDEPS 36 (69)
T ss_dssp BCCBCTTCEEEEEEECTT
T ss_pred cccCCCCCEEEEEEecCC
Confidence 456899999999876544
No 63
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=40.40 E-value=23 Score=19.92 Aligned_cols=19 Identities=21% Similarity=0.207 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 19 eLsf~~Gd~i~v~~~~~~~ 37 (68)
T 2ew3_A 19 ELGFKEGDIITLTNQIDEN 37 (68)
T ss_dssp BCCBCTTCEEEEEEESSSS
T ss_pred ccCCCCCCEEEEEEecCCC
Confidence 4568999999998865443
No 64
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=40.36 E-value=23 Score=18.78 Aligned_cols=18 Identities=22% Similarity=0.368 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 19 eLs~~~Gd~i~v~~~~~~ 36 (58)
T 2drm_A 19 ELTFKEGDTIIVHQKDPA 36 (58)
T ss_dssp BCCBCTTCEEEEEECCTT
T ss_pred CcCCCCCCEEEEEEecCC
Confidence 566899999999876543
No 65
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=40.20 E-value=15 Score=21.35 Aligned_cols=16 Identities=25% Similarity=0.166 Sum_probs=11.9
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 38 spA~~aGl~~GD~I~~ 53 (91)
T 2pkt_A 38 SKAALANLCIGDVITA 53 (91)
T ss_dssp SHHHHTTCCTTCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3455568999999874
No 66
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=40.02 E-value=23 Score=19.26 Aligned_cols=19 Identities=26% Similarity=0.270 Sum_probs=14.3
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+......
T Consensus 21 ~eLs~~~Gd~i~v~~~~~~ 39 (64)
T 2ak5_A 21 DELSFSKGDVIHVTRVEEG 39 (64)
T ss_dssp TBCCBCTTCEEEEEECCTT
T ss_pred CcccCCCCCEEEEeEecCC
Confidence 3566899999999876444
No 67
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.99 E-value=26 Score=19.40 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=14.4
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+......
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~ 40 (68)
T 2dl4_A 22 EDLEMRPGDIITLLEDSNE 40 (68)
T ss_dssp TBCCCCTTCEEEEEECCCS
T ss_pred CCcCCCCCCEEEEEEeCCC
Confidence 3567899999999886444
No 68
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=39.90 E-value=23 Score=19.49 Aligned_cols=18 Identities=17% Similarity=0.272 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (67)
T 2o9s_A 22 EMSFRKGERITLLRQVDE 39 (67)
T ss_dssp BCCBCTTCEEEEEEECSS
T ss_pred ccCCCCCCEEEEEEecCC
Confidence 456899999999876443
No 69
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=39.78 E-value=21 Score=23.63 Aligned_cols=17 Identities=24% Similarity=0.598 Sum_probs=14.8
Q ss_pred hHHHHhhcCCCCCCEEEEE
Q 043432 79 TRAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 79 W~~fV~~k~L~~GD~i~f~ 97 (105)
-.+|.| ..++||.+.||
T Consensus 31 arn~lr--~Mk~GD~~~fY 47 (147)
T 2p5d_A 31 YKNTIN--KVKVGDKLIIY 47 (147)
T ss_dssp GHHHHT--TCCTTCEEEEE
T ss_pred HHHHHH--hCCCCCEEEEE
Confidence 467887 79999999999
No 70
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=39.63 E-value=16 Score=19.44 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=13.2
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 17 eLs~~~Gd~i~v~~~~~~ 34 (59)
T 1yn8_A 17 ELRLAEGDIVFISYKHGQ 34 (59)
T ss_dssp BCCBCTTCEEEEEEEEET
T ss_pred CcCCCCCCEEEEEEcCCC
Confidence 456899999999765433
No 71
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=39.61 E-value=15 Score=20.66 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=14.7
Q ss_pred cCCCCCCEEEEEEcCCCC
Q 043432 86 YCLELGDYIMVYKDELEG 103 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~~g 103 (105)
..|+.||.|.|..-.++|
T Consensus 49 ~~L~~gD~v~i~~~V~GG 66 (66)
T 1f0z_A 49 HIVQDGDQILLFQVIAGG 66 (66)
T ss_dssp CCCCTTEEECEEESCCCC
T ss_pred cCCCCCCEEEEEeecccC
Confidence 579999999999866554
No 72
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=39.52 E-value=23 Score=19.40 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=13.6
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (65)
T 2j05_A 22 EISFLKGDMFIVHNELED 39 (65)
T ss_dssp BCCBCTTCEEEEEEECTT
T ss_pred cCcCCCCCEEEEeEecCC
Confidence 456899999999875443
No 73
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=38.77 E-value=16 Score=21.83 Aligned_cols=14 Identities=7% Similarity=0.014 Sum_probs=11.0
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||+|+=
T Consensus 15 A~~aGl~~GD~I~~ 28 (95)
T 3id1_A 15 AAEAQIAPGTELKA 28 (95)
T ss_dssp HHHTTCCTTCEEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 45679999999873
No 74
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=38.49 E-value=18 Score=22.78 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=17.4
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
...+..+..++||+|+|--..
T Consensus 22 ~~Wa~~~~F~vGD~LvF~y~~ 42 (109)
T 1ws8_A 22 AKWASSNKFHVGDSLLFNYNN 42 (109)
T ss_dssp HHHHHTSCBCTTCEEEEECCT
T ss_pred hHhhcCCcCcCCCEEEEeecC
Confidence 466889999999999997653
No 75
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=38.33 E-value=25 Score=19.35 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=14.0
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+......
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (68)
T 2dl3_A 23 ELPLQKGDIVYIYKQIDQ 40 (68)
T ss_dssp BCCBCTTCEEEEEECCST
T ss_pred CccCCCCCEEEEeEecCC
Confidence 566899999999876444
No 76
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=38.29 E-value=32 Score=21.62 Aligned_cols=31 Identities=19% Similarity=0.451 Sum_probs=21.2
Q ss_pred CCCEEEEEEECCCCeEEEEEEEEcCCCCCcceee
Q 043432 43 KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIF 76 (105)
Q Consensus 43 ~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l 76 (105)
..|..|.|.-. +.+.|.|+|++- ++.+..-|
T Consensus 23 g~GL~L~V~ps-G~K~w~~rYr~~--GK~~~~~L 53 (108)
T 3ju0_A 23 GFGMHLLVHPN-GSKYWRLSYRFE--KKQRLLAL 53 (108)
T ss_dssp ETTEEEEECTT-SCEEEEEEEEET--TEEEEEEE
T ss_pred CCceEEEEEcC-CCEEEEEEEEEc--CceEEEec
Confidence 46788888755 579999998863 55444333
No 77
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=38.24 E-value=26 Score=18.94 Aligned_cols=18 Identities=11% Similarity=0.274 Sum_probs=13.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 17 eLs~~~Gd~i~v~~~~~~ 34 (65)
T 2oaw_A 17 EVTMKKGDILTLLNSTNK 34 (65)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CCCCCCCCEEEEEEcCCC
Confidence 456899999999886443
No 78
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.20 E-value=30 Score=19.08 Aligned_cols=18 Identities=11% Similarity=0.333 Sum_probs=14.0
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (68)
T 1x2p_A 23 QLSFLRGEKILILRQTTA 40 (68)
T ss_dssp BCCCCTTCEEEEEECCSS
T ss_pred CcCCCCCCEEEEEEcCCC
Confidence 566899999999886543
No 79
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=38.17 E-value=28 Score=21.10 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=21.9
Q ss_pred EEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEE
Q 043432 46 FWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMV 96 (105)
Q Consensus 46 ~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f 96 (105)
..+.+.|. || +.+++.| .+.+.. .|++||+|.+
T Consensus 40 ~~~~l~De-TG---~I~~tlW-------------~~~~~~-~i~~Gdvv~i 72 (97)
T 3e0e_A 40 KSLFLKDD-TG---SIRGTLW-------------NELADF-EVKKGDIAEV 72 (97)
T ss_dssp EEEEEEET-TE---EEEEEEE-------------GGGGGC-CCCTTCEEEE
T ss_pred EEEEEECC-CC---cEEEEEE-------------CCcccc-ccCCCCEEEE
Confidence 34667777 56 4566666 333333 8999999998
No 80
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=38.13 E-value=25 Score=19.76 Aligned_cols=19 Identities=11% Similarity=0.261 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+....++|
T Consensus 15 eLs~~~Gd~i~v~~~~~~~ 33 (73)
T 2kxd_A 15 EVTMKKGDILTLLNSTNKD 33 (73)
T ss_dssp CCCBCTTCEEEEEECCSSS
T ss_pred EeeEcCCCEEEEEEecCCC
Confidence 4568999999998865443
No 81
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=38.03 E-value=26 Score=18.99 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=12.4
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 17 eLs~~~Gd~i~v~~~ 31 (62)
T 2j6f_A 17 ELTIRVGEIIRNVKK 31 (62)
T ss_dssp BCCBCTTCEEEEEEE
T ss_pred CcCCcCCCEEEEEEe
Confidence 456899999998876
No 82
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=38.02 E-value=23 Score=23.35 Aligned_cols=19 Identities=16% Similarity=0.454 Sum_probs=15.0
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.+|.+ ..++||.++||-..
T Consensus 29 rn~lr--~mk~GD~~~fYhs~ 47 (145)
T 2hd9_A 29 KNTLS--RVKPGDKLVIYVRQ 47 (145)
T ss_dssp HHHHT--TCCTTCEEEEEECC
T ss_pred HHHHH--hCCCCCEEEEEEcc
Confidence 35565 79999999999753
No 83
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=37.92 E-value=27 Score=18.95 Aligned_cols=18 Identities=11% Similarity=0.021 Sum_probs=13.7
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+....+.
T Consensus 25 eLs~~~Gd~i~v~~~~~~ 42 (65)
T 3ulr_B 25 EISFDPDDIITNIEMIDD 42 (65)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred EeeEecCCEEEEEEecCC
Confidence 457899999998876544
No 84
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=37.92 E-value=17 Score=21.14 Aligned_cols=16 Identities=25% Similarity=0.023 Sum_probs=12.5
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 38 spA~~aGl~~GD~I~~ 53 (91)
T 2vsp_A 38 GPADLAGLEDEDVIIE 53 (91)
T ss_dssp SHHHHTTCCTTCEEEE
T ss_pred ChHHHcCCCCCCEEEE
Confidence 4566678999999874
No 85
>1dzf_A DNA-directed RNA polymerases I, II, and III 27 KD polypeptide; RNA polymerase subunit; 1.9A {Saccharomyces cerevisiae} SCOP: c.52.3.1 d.78.1.1 PDB: 1i3q_E 1i50_E 1i6h_E 1k83_E* 1nik_E 1nt9_E 1pqv_E 1r5u_E 1r9s_E* 1r9t_E* 1sfo_E* 1twa_E* 1twc_E* 1twf_E* 1twg_E* 1twh_E* 1wcm_E 1y1v_E 1y1w_E 1y1y_E ...
Probab=37.84 E-value=27 Score=24.96 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=21.2
Q ss_pred hHHHHhhcCCCCCCEEEEEEc-CCCCCC
Q 043432 79 TRAFIKRYCLELGDYIMVYKD-ELEGSY 105 (105)
Q Consensus 79 W~~fV~~k~L~~GD~i~f~~~-~~~g~~ 105 (105)
-...++..+|+.||+|-+.|. +-.|+|
T Consensus 181 ~DPvar~~g~k~G~vvkI~R~s~tag~~ 208 (215)
T 1dzf_A 181 ADPVALYLGLKRGEVVKIIRKSETSGRY 208 (215)
T ss_dssp TCHHHHHHTCCTTCEEEEECTTCSSSTT
T ss_pred cChhhHHhCCcCCCEEEEEECCCCCCCc
Confidence 357789999999999999995 444544
No 86
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=37.82 E-value=27 Score=19.26 Aligned_cols=18 Identities=17% Similarity=0.158 Sum_probs=13.7
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 18 eLs~~~Gd~i~v~~~~~~ 35 (67)
T 1gl5_A 18 DLRLERGQEYIILEKNDL 35 (67)
T ss_dssp BCCBCTTCEEEEEECSSS
T ss_pred eecCCcCCEEEEEEccCC
Confidence 456899999999886443
No 87
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=37.75 E-value=86 Score=20.63 Aligned_cols=56 Identities=13% Similarity=-0.000 Sum_probs=35.1
Q ss_pred CCCEEEEEEECCCCeEEEEEEEEcCCCCCcc--eeecChHHHHhh-cCCCCCCEEEEEE
Q 043432 43 KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRM--YIFENTRAFIKR-YCLELGDYIMVYK 98 (105)
Q Consensus 43 ~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~--y~l~gW~~fV~~-k~L~~GD~i~f~~ 98 (105)
.-|..|.+.|..+|....|.+....-.+... +.++-=+..-++ .+.++||.|.+--
T Consensus 84 ~~Gs~V~l~~~~~~~~~~~~iVg~~ead~~~~~~~IS~~SPlG~ALlGk~~GD~v~~~~ 142 (156)
T 2f23_A 84 GLGSVVELEDPLSGERLSVQVVSPAEANVLDTPMKISDASPMGKALLGHRVGDVLSLDT 142 (156)
T ss_dssp CTTCEEEEECTTTCCEEEEEEECGGGCBTTSSSEEEETTSHHHHHHTTCCTTCEEEEEE
T ss_pred EeCcEEEEEEcCCCCEEEEEEEChhHcCcCCCCEEECCCCHHHHHHcCCCCCCEEEEEc
Confidence 3467889999666887777776542222211 244433555554 5889999988754
No 88
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=37.75 E-value=16 Score=21.28 Aligned_cols=15 Identities=20% Similarity=0.091 Sum_probs=11.5
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 36 pA~~aGl~~GD~I~~ 50 (91)
T 2f5y_A 36 PAERAGLQQLDTVLQ 50 (91)
T ss_dssp HHHHHTCCTTCEEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 445568999999864
No 89
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=37.54 E-value=18 Score=20.94 Aligned_cols=15 Identities=13% Similarity=0.372 Sum_probs=11.4
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 39 pA~~aGl~~GD~I~~ 53 (89)
T 2q3g_A 39 KAAQAGVAVGDWVLS 53 (89)
T ss_dssp HHHHTTCCTTCEEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 445568999999874
No 90
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=37.52 E-value=23 Score=21.53 Aligned_cols=18 Identities=22% Similarity=-0.088 Sum_probs=13.9
Q ss_pred cCCCCCCEEEEEEcCCCC
Q 043432 86 YCLELGDYIMVYKDELEG 103 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~~g 103 (105)
..|+.||.|.|+.-.++|
T Consensus 70 ~~L~dGD~Vei~~~V~GG 87 (87)
T 1tyg_B 70 VELCDRDVIEIVHFVGGG 87 (87)
T ss_dssp SBCCSSSEEEEEEECCC-
T ss_pred cCCCCCCEEEEEcccccC
Confidence 459999999999866554
No 91
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=37.27 E-value=30 Score=19.75 Aligned_cols=19 Identities=21% Similarity=0.447 Sum_probs=14.2
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.|++||+|.+......
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~ 40 (80)
T 1ue9_A 22 EQLSLAPGQLILILKKNTS 40 (80)
T ss_dssp TBCCCCTTCEEEEEEECSS
T ss_pred CCCCCCCCCEEEEEEecCC
Confidence 3457899999999876443
No 92
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=37.19 E-value=18 Score=20.80 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=11.4
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 39 pA~~aGl~~GD~I~~ 53 (88)
T 2uzc_A 39 KAAQANVRIGDVVLS 53 (88)
T ss_dssp HHHHTTCCTTCEEEE
T ss_pred hHHHcCCCCCCEEEE
Confidence 445568999999874
No 93
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=37.19 E-value=17 Score=23.33 Aligned_cols=12 Identities=25% Similarity=0.304 Sum_probs=10.0
Q ss_pred cCCCCCCEEEEE
Q 043432 86 YCLELGDYIMVY 97 (105)
Q Consensus 86 k~L~~GD~i~f~ 97 (105)
.++++||.|+|.
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 468999999983
No 94
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=37.16 E-value=26 Score=19.37 Aligned_cols=15 Identities=27% Similarity=0.262 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.|++||+|.+...
T Consensus 26 eLsf~~Gd~i~v~~~ 40 (70)
T 1gcq_C 26 FLRLNPGDIVELTKA 40 (70)
T ss_dssp BCCBCTTCEEEEEEC
T ss_pred cCCcCCCCEEEEEeC
Confidence 667899999999886
No 95
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=37.15 E-value=17 Score=23.27 Aligned_cols=12 Identities=33% Similarity=0.540 Sum_probs=10.3
Q ss_pred hcCCCCCCEEEE
Q 043432 85 RYCLELGDYIMV 96 (105)
Q Consensus 85 ~k~L~~GD~i~f 96 (105)
..++++||.|+|
T Consensus 31 ~~~ikvGD~I~f 42 (109)
T 2z0t_A 31 RRQIKPGDIIIF 42 (109)
T ss_dssp GGGCCTTCEEEE
T ss_pred hhcCCCCCEEEE
Confidence 357899999999
No 96
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=37.07 E-value=13 Score=20.91 Aligned_cols=17 Identities=12% Similarity=0.127 Sum_probs=12.8
Q ss_pred cCCCCCCEEEEEEcCCC
Q 043432 86 YCLELGDYIMVYKDELE 102 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~~ 102 (105)
-.+++||+|.+....+.
T Consensus 21 Ls~~~Gd~i~v~~~~~~ 37 (60)
T 2lx7_A 21 LRFAAGELITLLQVPDG 37 (60)
T ss_dssp CCCCTTCEEEBSCCCTT
T ss_pred ccCCCCCEEEEeEecCC
Confidence 57899999998765443
No 97
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=37.07 E-value=28 Score=18.71 Aligned_cols=18 Identities=22% Similarity=0.298 Sum_probs=13.5
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (64)
T 4f14_A 22 EVSFRDGDYIVNVQPIDD 39 (64)
T ss_dssp BCCBCTTCEEEEEEECSS
T ss_pred cCCCCCCCEEEEEEeCCC
Confidence 457899999988776443
No 98
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=36.98 E-value=26 Score=19.34 Aligned_cols=19 Identities=26% Similarity=0.396 Sum_probs=14.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+......|
T Consensus 29 eLs~~~Gd~i~v~~~~~~~ 47 (72)
T 4glm_A 29 ELDFEVGDKIRILATLEDG 47 (72)
T ss_dssp BCCBCTTCEEEEEEECSTT
T ss_pred cCCCCCCCEEEEEEccCCC
Confidence 3578999999998765443
No 99
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.96 E-value=31 Score=19.05 Aligned_cols=19 Identities=21% Similarity=0.219 Sum_probs=14.3
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+......
T Consensus 22 ~eLs~~~Gd~i~v~~~~~~ 40 (68)
T 1x2k_A 22 DELYFEEGDIIYITDMSDT 40 (68)
T ss_dssp TBCCCCSSCEEEEEECSCS
T ss_pred CcccCCCCCEEEEEEcCCC
Confidence 3567899999999876443
No 100
>2qjl_A URM1, ubiquitin-related modifier 1; ubiquitin-like protein, signaling protein; 1.44A {Saccharomyces cerevisiae} PDB: 2pko_A 2ax5_A
Probab=36.91 E-value=26 Score=21.24 Aligned_cols=19 Identities=37% Similarity=0.398 Sum_probs=15.0
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||+|.|+.-..+|
T Consensus 81 d~~L~dgDeVa~~Ppv~GG 99 (99)
T 2qjl_A 81 DYILEDGDIISFTSTLHGG 99 (99)
T ss_dssp GCBCCTTCEEEEEECTTCC
T ss_pred CcCcCCCCEEEEECCCCCC
Confidence 4679999999999865544
No 101
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=36.80 E-value=19 Score=19.41 Aligned_cols=18 Identities=17% Similarity=0.427 Sum_probs=13.5
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (60)
T 2gnc_A 22 ELSFKKGASLLLYHRASE 39 (60)
T ss_dssp BCCBCTTCEEEEEEEEET
T ss_pred CcCCCCCCEEEEEEecCC
Confidence 456899999999875433
No 102
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=36.77 E-value=29 Score=18.14 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 16 eLs~~~Gd~i~v~~~~ 31 (54)
T 2a28_A 16 EISIDPGDIITVIRGD 31 (54)
T ss_dssp BCCBCTTCEEEEEECC
T ss_pred CccCCCCCEEEEEEec
Confidence 4568999999998865
No 103
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=36.76 E-value=17 Score=21.39 Aligned_cols=16 Identities=19% Similarity=0.044 Sum_probs=12.0
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 44 spA~~aGl~~GD~I~~ 59 (98)
T 2jxo_A 44 SPAEASGLRAQDRIVE 59 (98)
T ss_dssp SHHHHHTCCTTCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3455668999999874
No 104
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=36.73 E-value=28 Score=19.01 Aligned_cols=18 Identities=11% Similarity=0.268 Sum_probs=13.6
Q ss_pred cCCCCCCEEEEEEcCCCC
Q 043432 86 YCLELGDYIMVYKDELEG 103 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~~g 103 (105)
-.+++||+|.+......|
T Consensus 6 Ls~~~Gd~i~v~~~~~~~ 23 (63)
T 1tuc_A 6 VTMKKGDILTLLNSTNKD 23 (63)
T ss_dssp CCBCTTCEEEEEECCSSS
T ss_pred cCCCCCCEEEEEEecCCC
Confidence 457899999998865443
No 105
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=36.51 E-value=18 Score=21.28 Aligned_cols=14 Identities=29% Similarity=0.306 Sum_probs=11.1
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||.|+=
T Consensus 43 A~~aGL~~GD~I~~ 56 (94)
T 1vb7_A 43 AEAADLRPGDIIVA 56 (94)
T ss_dssp HHHHTCCTTCEEEE
T ss_pred HHHCCCCCCCEEEE
Confidence 44678999999873
No 106
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=36.44 E-value=18 Score=20.96 Aligned_cols=16 Identities=13% Similarity=-0.197 Sum_probs=11.8
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 43 spA~~aGl~~GD~I~~ 58 (91)
T 1m5z_A 43 GPGDLGGLKPYDRLLQ 58 (91)
T ss_dssp SHHHHHTCCTTCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3445568999999874
No 107
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=36.41 E-value=27 Score=19.34 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=13.6
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 19 eLsf~~Gd~i~v~~~~~~ 36 (65)
T 1b07_A 19 DLPFKKGDILRIRDKPEE 36 (65)
T ss_dssp BCCBCTTCEEEEEECSSS
T ss_pred ccCCcCCCEEEEEEecCC
Confidence 456899999999886443
No 108
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=36.38 E-value=28 Score=19.18 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=13.7
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (69)
T 4esr_A 22 ELTIHRGDIIRVFFKDNE 39 (69)
T ss_dssp BCCBCTTCEEEEEEECSS
T ss_pred cCCCCCCCEEEEEEecCC
Confidence 457899999999876544
No 109
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=36.31 E-value=18 Score=21.64 Aligned_cols=10 Identities=40% Similarity=0.534 Sum_probs=8.8
Q ss_pred CCCCCCEEEE
Q 043432 87 CLELGDYIMV 96 (105)
Q Consensus 87 ~L~~GD~i~f 96 (105)
+|++||.|+=
T Consensus 23 GL~~GD~I~~ 32 (100)
T 3i18_A 23 VLHAGDLITE 32 (100)
T ss_dssp TCCTTCEEEE
T ss_pred CCCCCCEEEE
Confidence 9999999874
No 110
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=36.24 E-value=28 Score=19.57 Aligned_cols=19 Identities=21% Similarity=0.205 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 29 eLs~~~Gd~i~v~~~~~~~ 47 (73)
T 3c0c_A 29 ELGFREGDLITLTNQIDEN 47 (73)
T ss_dssp BCCBCTTCEEEEEEECSSS
T ss_pred CccCcCCCEEEEEEecCCC
Confidence 5668999999998865443
No 111
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=36.10 E-value=18 Score=20.59 Aligned_cols=19 Identities=11% Similarity=0.100 Sum_probs=14.9
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|+.-..+|
T Consensus 59 ~~~L~~gD~V~i~ppv~GG 77 (77)
T 2q5w_D 59 SDFIQPNDTVALIPPVSGG 77 (77)
T ss_dssp TSEECTTCEEEEECSCCCC
T ss_pred CCCcCCCCEEEEECCCCCC
Confidence 3579999999999865554
No 112
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=36.04 E-value=23 Score=20.79 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=15.1
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|+.-..+|
T Consensus 71 ~~~l~~gDeV~i~Ppv~GG 89 (89)
T 3po0_A 71 GEATAAGDELALFPPVSGG 89 (89)
T ss_dssp TSBCCTTCEEEEECCCSCC
T ss_pred CcccCCCCEEEEECCCCCC
Confidence 5679999999999865554
No 113
>3dwg_C 9.5 kDa culture filtrate antigen CFP10A; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3dwm_A
Probab=36.03 E-value=28 Score=20.62 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=15.0
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|+.-..+|
T Consensus 75 ~~~L~~gDeV~i~Ppv~GG 93 (93)
T 3dwg_C 75 ATAIADGDSVTILPAVAGG 93 (93)
T ss_dssp GCBCCTTCEEEEEECCTTC
T ss_pred CcCCCCCCEEEEECCCCCC
Confidence 4569999999999866554
No 114
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=36.02 E-value=19 Score=20.81 Aligned_cols=14 Identities=29% Similarity=0.350 Sum_probs=10.7
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||.|+=
T Consensus 17 A~~aGl~~GD~I~~ 30 (91)
T 2zpm_A 17 ASXAGLQAGDRIVX 30 (91)
T ss_dssp HHHTTCCTTCEEEE
T ss_pred HHhcCCCCCCEEEE
Confidence 34458999999874
No 115
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=35.91 E-value=19 Score=21.75 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=11.2
Q ss_pred HHhhcCCCCCCEEE
Q 043432 82 FIKRYCLELGDYIM 95 (105)
Q Consensus 82 fV~~k~L~~GD~i~ 95 (105)
.....+|++||+|+
T Consensus 49 ~A~~aGl~~GDvI~ 62 (105)
T 2i4s_A 49 LFESIGLQDGDMAV 62 (105)
T ss_dssp HHHHHTCCTTCEEE
T ss_pred HHHHcCCCCCCEEE
Confidence 44566999999986
No 116
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.86 E-value=27 Score=19.93 Aligned_cols=19 Identities=26% Similarity=0.412 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 33 eLsf~~Gd~i~v~~~~~~g 51 (78)
T 2ed0_A 33 ELSFQEGAIIYVIKKNDDG 51 (78)
T ss_dssp BCCBCSSCEEEEEEECSSS
T ss_pred cccccCCCEEEEEEeCCCC
Confidence 5568999999998765443
No 117
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=35.78 E-value=28 Score=20.11 Aligned_cols=18 Identities=6% Similarity=0.156 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+.....+
T Consensus 21 eLs~~~Gd~i~vl~~~~~ 38 (79)
T 3cqt_A 21 DLSFHKGEKFQILNSSEG 38 (79)
T ss_dssp BCCBCTTCEEEEEECTTS
T ss_pred cCCCCCCCEEEEEEecCC
Confidence 567899999999875443
No 118
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=35.75 E-value=29 Score=19.29 Aligned_cols=19 Identities=11% Similarity=0.102 Sum_probs=13.9
Q ss_pred hhcCCCCCCEEEEEE-cCCC
Q 043432 84 KRYCLELGDYIMVYK-DELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~-~~~~ 102 (105)
.+-.+++||+|.+.. ...+
T Consensus 26 ~eLs~~~Gd~i~v~~~~~~~ 45 (71)
T 1csk_A 26 QDLPFCKGDVLTIVAVTKDP 45 (71)
T ss_dssp TBCCBCTTCEEEEEEECSST
T ss_pred CcCCCCCCCEEEEeECCCCC
Confidence 355689999999988 4433
No 119
>3h0g_E DNA-directed RNA polymerases I, II, and III subunit rpabc1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=35.73 E-value=31 Score=24.58 Aligned_cols=27 Identities=15% Similarity=0.364 Sum_probs=20.8
Q ss_pred hHHHHhhcCCCCCCEEEEEEcC-CCCCC
Q 043432 79 TRAFIKRYCLELGDYIMVYKDE-LEGSY 105 (105)
Q Consensus 79 W~~fV~~k~L~~GD~i~f~~~~-~~g~~ 105 (105)
-...++..+|+.||+|-+.|.. -.|+|
T Consensus 176 ~DPv~~~~g~k~GdVvkI~R~s~tag~~ 203 (210)
T 3h0g_E 176 ADPVARYLGLKRGEVVKIVRRSETSGRY 203 (210)
T ss_dssp TCHHHHHHTCCTTCEEEEECCCCTTSCC
T ss_pred cCcchhhhCCCCCCEEEEEeCCCCCCCc
Confidence 3567888999999999999964 34544
No 120
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=35.70 E-value=15 Score=20.52 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=13.4
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+.....+
T Consensus 17 eLs~~~Gd~i~v~~~~~~ 34 (65)
T 2fei_A 17 ELELKVGDIIDINEEVEE 34 (65)
T ss_dssp BCCCCTTCEEECCCCSSS
T ss_pred ccCCCCCCEEEEEEecCC
Confidence 456899999998775443
No 121
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.59 E-value=27 Score=20.48 Aligned_cols=19 Identities=32% Similarity=0.597 Sum_probs=14.0
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+......|
T Consensus 34 eLsf~~Gd~i~v~~~~~~~ 52 (88)
T 2dbk_A 34 ALALEVGDIVKVTRMNING 52 (88)
T ss_dssp BCCBCTTCEEEEEEECTTS
T ss_pred cccCCCCCEEEEEEecCCC
Confidence 3568999999998765443
No 122
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=35.50 E-value=29 Score=19.92 Aligned_cols=18 Identities=11% Similarity=0.274 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 18 eLs~~~Gd~i~v~~~~~~ 35 (80)
T 2pqh_A 18 EVTMKKGDILTLLNSTNK 35 (80)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred ccCCCCCCEEEEEEecCC
Confidence 456899999999886544
No 123
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=35.46 E-value=19 Score=21.08 Aligned_cols=16 Identities=19% Similarity=0.270 Sum_probs=12.1
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 45 spA~~aGl~~GD~I~~ 60 (97)
T 2w4f_A 45 GPAARAGVRVGDKLLE 60 (97)
T ss_dssp SHHHHHTCCTTCEEEE
T ss_pred ChHHHcCCCCCCEEEE
Confidence 3455668999999874
No 124
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=35.25 E-value=19 Score=20.83 Aligned_cols=17 Identities=18% Similarity=0.086 Sum_probs=12.3
Q ss_pred HHHhhcCCCCCCEEEEE
Q 043432 81 AFIKRYCLELGDYIMVY 97 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f~ 97 (105)
.-+...+|++||.|+=.
T Consensus 39 spA~~aGl~~GD~I~~i 55 (90)
T 2he4_A 39 SPAARSGLRAQDRLIEV 55 (90)
T ss_dssp SHHHHHTCCTTCEEEEE
T ss_pred ChHHHCCCCCCCEEEEE
Confidence 34556679999998743
No 125
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=35.11 E-value=32 Score=18.37 Aligned_cols=18 Identities=11% Similarity=0.276 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||.|.+......
T Consensus 22 eLs~~~Gd~i~v~~~~~~ 39 (62)
T 3ngp_A 22 ELTVKKGDILTLLNSTNK 39 (62)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CccCCCCCEEEEeEecCC
Confidence 457899999999886544
No 126
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=34.82 E-value=24 Score=29.20 Aligned_cols=20 Identities=25% Similarity=0.673 Sum_probs=18.5
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
.+++++++++.||.|++.|.
T Consensus 359 ~d~i~~~di~iGD~V~V~rA 378 (667)
T 1dgs_A 359 ESYIEELDIRIGDWVLVHKA 378 (667)
T ss_dssp HHHHHHTTCBSSCEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEEC
Confidence 58999999999999999984
No 127
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.73 E-value=21 Score=20.96 Aligned_cols=15 Identities=27% Similarity=0.106 Sum_probs=11.5
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+.+.+|++||.|+=
T Consensus 44 pA~~aGl~~GD~I~~ 58 (94)
T 2eeg_A 44 KAALAALCPGDLIQA 58 (94)
T ss_dssp HHHHTTCCTTCEEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 444568999999974
No 128
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=34.64 E-value=21 Score=20.65 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=11.9
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 38 spA~~aGL~~GD~I~~ 53 (91)
T 1g9o_A 38 SPAEKAGLLAGDRLVE 53 (91)
T ss_dssp SHHHHTTCCTTCEEEE
T ss_pred CHHHHCCCCCCCEEEE
Confidence 3455667999999874
No 129
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.57 E-value=27 Score=19.37 Aligned_cols=19 Identities=16% Similarity=0.260 Sum_probs=14.1
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+......|
T Consensus 23 eLs~~~Gd~i~v~~~~~~~ 41 (68)
T 2dmo_A 23 ELQVMPGNIVFVLKKGNDN 41 (68)
T ss_dssp SCCCCTTCEEEECEECSSS
T ss_pred CCCCCCCCEEEEEEeCCCC
Confidence 4568999999998765443
No 130
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.55 E-value=24 Score=19.50 Aligned_cols=19 Identities=26% Similarity=0.291 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+.....+|
T Consensus 23 eLs~~~Gd~i~v~~~~~~g 41 (70)
T 2ct3_A 23 ELELREGDRVDVMQQCDDG 41 (70)
T ss_dssp BCCBCTTEEEEEEEECSSS
T ss_pred CccCCCCCEEEEEEECCCC
Confidence 5678999999998764443
No 131
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=34.46 E-value=22 Score=19.22 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=13.4
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||.|.+......
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (65)
T 3u23_A 23 ELELKVGDIIDINEEVEE 40 (65)
T ss_dssp BCCBCTTCEEEEEEEEET
T ss_pred CcCCCCCCEEEEEEecCC
Confidence 457899999998875433
No 132
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=34.41 E-value=25 Score=29.18 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=18.4
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
.+++++++++.||.|++.|.
T Consensus 361 ~d~i~~~di~iGD~V~V~rA 380 (671)
T 2owo_A 361 ADEIERLGLRIGDKVVIRRA 380 (671)
T ss_dssp HHHHHHHTCCBTCEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEEC
Confidence 58999999999999999985
No 133
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=34.32 E-value=26 Score=20.04 Aligned_cols=19 Identities=21% Similarity=0.209 Sum_probs=14.9
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|+.-..+|
T Consensus 63 ~~~l~~gD~V~i~Ppv~GG 81 (81)
T 1fm0_D 63 DHPLTDGDEVAFFPPVTGG 81 (81)
T ss_dssp TCBCCTTCEEEEECCCCCC
T ss_pred CCCCCCCCEEEEeCCCCCC
Confidence 4579999999998765544
No 134
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.24 E-value=29 Score=19.77 Aligned_cols=19 Identities=32% Similarity=0.553 Sum_probs=14.4
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+......|
T Consensus 23 eLs~~~Gd~i~v~~~~~~~ 41 (79)
T 2yun_A 23 ELNLEKGDIVIIHEKKEEG 41 (79)
T ss_dssp BCCBCTTCEEEEEECCSSS
T ss_pred CcCCCCCCEEEEEEcCCCC
Confidence 5668999999998765443
No 135
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=34.22 E-value=18 Score=20.57 Aligned_cols=15 Identities=27% Similarity=0.208 Sum_probs=11.1
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 35 pA~~aGl~~GD~I~~ 49 (83)
T 2kv8_A 35 PADFVGLRAGDQILA 49 (83)
T ss_dssp TTTTTTCCTTCEEEE
T ss_pred hHHHcCCCCCCEEEE
Confidence 344558999999874
No 136
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=34.18 E-value=21 Score=20.99 Aligned_cols=16 Identities=25% Similarity=0.104 Sum_probs=12.0
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 48 spA~~aGL~~GD~I~~ 63 (96)
T 2ego_A 48 SPAQLAGLTPGDTIAS 63 (96)
T ss_dssp CHHHHTTCCTTCEEEE
T ss_pred ChHHHcCCCCCCEEEE
Confidence 3455667999999874
No 137
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=33.99 E-value=20 Score=21.10 Aligned_cols=15 Identities=27% Similarity=0.202 Sum_probs=11.4
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 46 pA~~aGl~~GD~I~~ 60 (99)
T 3khf_A 46 PAQEAGLRAGDLITH 60 (99)
T ss_dssp HHHHHTCCTTCEEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 445668999999864
No 138
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=33.97 E-value=26 Score=20.32 Aligned_cols=20 Identities=20% Similarity=0.194 Sum_probs=16.0
Q ss_pred hcCCCCCCEEEEEEcCCCCC
Q 043432 85 RYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g~ 104 (105)
+..|+.||.|.+..-.++|.
T Consensus 47 ~~~L~dGD~veIv~~VgGG~ 66 (73)
T 2kl0_A 47 ETPVTAGDEIEILTPRQGGL 66 (73)
T ss_dssp TCBCCTTCEEEEECCCCCCC
T ss_pred cccCCCCCEEEEEccccCCc
Confidence 35799999999998776663
No 139
>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}
Probab=33.96 E-value=25 Score=24.43 Aligned_cols=24 Identities=13% Similarity=0.080 Sum_probs=17.8
Q ss_pred HHHHhhcCCCCCCEEEEEEcCCCC
Q 043432 80 RAFIKRYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~~~g 103 (105)
..+.+...+++||.|.|.+.+++|
T Consensus 140 ~~~F~d~~v~kGd~i~~~~~p~~~ 163 (217)
T 4dol_A 140 CCIFQNRPLNKGSVILLTWINTSN 163 (217)
T ss_dssp HHHHTTCCBCTTCEEEEEEEETTE
T ss_pred HHHhCCCcCCCCCEEEEEEcCCCC
Confidence 344455679999999999876543
No 140
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=33.91 E-value=33 Score=18.92 Aligned_cols=18 Identities=22% Similarity=0.261 Sum_probs=14.0
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 24 eLs~~~Gd~i~v~~~~~~ 41 (69)
T 2dil_A 24 ELDLSAGDILEVILEGED 41 (69)
T ss_dssp SCCBCTTCEEEEEECCSS
T ss_pred ccCCCCCCEEEEEECCCC
Confidence 566899999999886444
No 141
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=33.81 E-value=40 Score=22.87 Aligned_cols=19 Identities=21% Similarity=0.527 Sum_probs=15.5
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.+|.| ..++||.+.||-..
T Consensus 38 rN~mr--~Mk~GD~~fFYHS~ 56 (155)
T 1zce_A 38 RNNMR--AMKIGDKGFFYHSN 56 (155)
T ss_dssp HHHHH--TCCTTCEEEEEETT
T ss_pred HHHHH--hccCCCEEEEEEeC
Confidence 46666 58999999999864
No 142
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=33.66 E-value=62 Score=19.82 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=22.0
Q ss_pred CCCCCCCCCEEEEEEECCCCeEEEEEEEEc
Q 043432 37 LPPVNEKAGFWMHLEDMDFNKVWTFKFRFW 66 (105)
Q Consensus 37 lP~l~~~~~~~l~~~D~~~g~~W~fr~~~~ 66 (105)
||.........|+++|.+ |++-+|..-|.
T Consensus 53 l~~~~~~Gdl~V~v~ead-G~~~~~~vp~~ 81 (90)
T 3fcg_A 53 LPLGGGSGELKVIIHESD-GTKQVFTVPYD 81 (90)
T ss_dssp CC---CCEEEEEEEECTT-SCEEEEEEEEC
T ss_pred CcccCCceeEEEEEEECC-CCEEEEEECcc
Confidence 566656667899999995 99999998887
No 143
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=33.45 E-value=34 Score=18.91 Aligned_cols=16 Identities=19% Similarity=0.488 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 22 eLs~~~Gd~i~v~~~~ 37 (71)
T 2jt4_A 22 ELTIKSGDKVYILDDK 37 (71)
T ss_dssp BCCBCTTCEEEEEESS
T ss_pred cccCCCCCEEEEEECC
Confidence 4568999999998864
No 144
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=33.40 E-value=22 Score=21.23 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=22.7
Q ss_pred CeEEEEEEEEcCCCCCcceeec-ChHHHHhhcCCCCCCEEEEE
Q 043432 56 NKVWTFKFRFWPNNRGRMYIFE-NTRAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 56 g~~W~fr~~~~~~~~s~~y~l~-gW~~fV~~k~L~~GD~i~f~ 97 (105)
+..|-|....-.. ....++.. --..-+...+|++||.|+=.
T Consensus 12 ~~~~G~~l~~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~i 53 (106)
T 3ngh_A 12 GQNYGFFLRIEKD-TDGHLIRVIEEGSPAEKAGLLDGDRVLRI 53 (106)
T ss_dssp TCCCCCEEECCTT-CCSCEEECCCTTSHHHHTTCCTTCEEEEE
T ss_pred CCeeCEEEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCEEEEE
Confidence 4556666554321 11233333 23445567789999998743
No 145
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=33.37 E-value=35 Score=18.08 Aligned_cols=15 Identities=20% Similarity=0.494 Sum_probs=12.5
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.|++||+|.+...
T Consensus 18 eLs~~~Gd~i~v~~~ 32 (60)
T 2v1q_A 18 ELTIKSGDKVYILDD 32 (60)
T ss_dssp BCCBCTTCEEEEEES
T ss_pred CccCCCCCEEEEEeC
Confidence 456899999999886
No 146
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=33.13 E-value=17 Score=24.01 Aligned_cols=20 Identities=10% Similarity=0.144 Sum_probs=16.7
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
...+..+..++||+|+|--.
T Consensus 24 ~~Wa~~~~F~vGD~LvF~y~ 43 (138)
T 1jer_A 24 SQWAAGKTFRVGDSLQFNFP 43 (138)
T ss_dssp HHHHHTCCEETTCEEEECCC
T ss_pred hhhhcCCcCcCCCEEEEeec
Confidence 46678899999999999654
No 147
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=33.10 E-value=17 Score=21.22 Aligned_cols=16 Identities=13% Similarity=0.106 Sum_probs=12.2
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 40 spA~~aGl~~GD~I~~ 55 (95)
T 3r68_A 40 SPAEAAGLKNNDLVVA 55 (95)
T ss_dssp SHHHHHTCCTTEEEEE
T ss_pred CHHHHCCCCCCCEEEE
Confidence 4456678999999864
No 148
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=32.94 E-value=19 Score=21.13 Aligned_cols=14 Identities=21% Similarity=0.259 Sum_probs=10.9
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||.|+=
T Consensus 42 A~~aGL~~GD~I~~ 55 (93)
T 2dls_A 42 AMKAGVKEGDRIIK 55 (93)
T ss_dssp TTTTTCCSSCEEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 44567999999874
No 149
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=32.93 E-value=22 Score=20.47 Aligned_cols=14 Identities=21% Similarity=0.238 Sum_probs=10.5
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 40 A~~aG~L~~GD~I~~ 54 (90)
T 2q9v_A 40 ADTDGRLRSGDELIS 54 (90)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 34456 999999874
No 150
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.86 E-value=30 Score=19.87 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=14.8
Q ss_pred hhcCCCCCCEEEEEEcCCCC
Q 043432 84 KRYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~g 103 (105)
.+-.|++||+|.+.....+|
T Consensus 23 ~eLs~~~Gd~i~vl~~~~~g 42 (80)
T 2ekh_A 23 SEISFPAGVEVQVLEKQESG 42 (80)
T ss_dssp TSCCBCTTCEEEEEEECTTS
T ss_pred CccCcCCCCEEEEEEeCCCC
Confidence 35568999999998765543
No 151
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=32.78 E-value=18 Score=21.23 Aligned_cols=16 Identities=19% Similarity=0.277 Sum_probs=12.1
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 41 spA~~aGl~~GD~I~~ 56 (96)
T 2v90_A 41 LPAKKAGMQAGDRLVA 56 (96)
T ss_dssp SHHHHTTCCTTEEEEE
T ss_pred ChHHHcCCCCCCEEEE
Confidence 3455678999999863
No 152
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=32.51 E-value=18 Score=20.57 Aligned_cols=15 Identities=20% Similarity=0.255 Sum_probs=11.3
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 37 pA~~aGl~~GD~I~~ 51 (85)
T 1rgw_A 37 KAAQSQLSQGDLVVA 51 (85)
T ss_dssp HHHHSSCCCCSBEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 344568999999874
No 153
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.51 E-value=22 Score=21.12 Aligned_cols=16 Identities=31% Similarity=0.266 Sum_probs=12.4
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 47 spA~~aGL~~GD~I~~ 62 (100)
T 2eeh_A 47 SSAERAGLCVGDKITE 62 (100)
T ss_dssp SHHHHHTCCSSCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 4456678999999874
No 154
>2kku_A Uncharacterized protein; alpha/beta protein, structural genomics, PSI-2, protein STRU initiative; NMR {Archaeoglobus fulgidus}
Probab=32.49 E-value=19 Score=24.77 Aligned_cols=18 Identities=17% Similarity=0.252 Sum_probs=14.4
Q ss_pred CCCCCCEEEEEEcCCCCC
Q 043432 87 CLELGDYIMVYKDELEGS 104 (105)
Q Consensus 87 ~L~~GD~i~f~~~~~~g~ 104 (105)
.|++||.|+||.....+.
T Consensus 58 ~l~~Gd~vviYaS~P~~~ 75 (161)
T 2kku_A 58 ELKPGMKFVFYQSHEDTG 75 (161)
T ss_dssp TCCTTEEEEECCCSTTCB
T ss_pred ccCCCCEEEEEEcCCCcE
Confidence 689999999998765443
No 155
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.48 E-value=40 Score=19.31 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 26 eLs~~~Gd~i~v~~~~~~ 43 (81)
T 2ysq_A 26 ELAFKAGDVIKVLDASNK 43 (81)
T ss_dssp SCCCCTTCEEEEEECCSS
T ss_pred cCCCCCCCEEEEEEEcCc
Confidence 466899999999886443
No 156
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=32.37 E-value=26 Score=20.17 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=14.1
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+.....+|
T Consensus 26 eLsf~~Gd~i~v~~~~~~~ 44 (80)
T 2i0n_A 26 LLPFKRNDIITITFKDQEN 44 (80)
T ss_dssp SCCBCSSEEEEEEEESSSS
T ss_pred CcCCCCCCEEEEEEecCCC
Confidence 4568999999998865443
No 157
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=32.33 E-value=36 Score=18.87 Aligned_cols=18 Identities=6% Similarity=0.156 Sum_probs=13.7
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 31 eLs~~~Gd~i~v~~~~~~ 48 (73)
T 3h0h_A 31 DLSFHKGEKFQILNSSEG 48 (73)
T ss_dssp BCCBCTTCEEEEEECSSS
T ss_pred cceEeCCCEEEEEEecCC
Confidence 557899999998875543
No 158
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=32.21 E-value=35 Score=18.81 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=13.3
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 19 eLs~~~Gd~i~v~~~~ 34 (69)
T 1wyx_A 19 ELSFRKGDIMTVLEQD 34 (69)
T ss_dssp BCCBCTTCEEEEEETT
T ss_pred ccCCcCCCEEEEeECC
Confidence 5578999999998865
No 159
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=32.11 E-value=21 Score=20.56 Aligned_cols=11 Identities=36% Similarity=0.413 Sum_probs=9.3
Q ss_pred cCCCCCCEEEE
Q 043432 86 YCLELGDYIMV 96 (105)
Q Consensus 86 k~L~~GD~i~f 96 (105)
.+|++||.|+=
T Consensus 41 aGl~~GD~I~~ 51 (88)
T 3bpu_A 41 RGLKEGDLIVE 51 (88)
T ss_dssp TTCCTTCEEEE
T ss_pred hCCCCCCEEEE
Confidence 59999999863
No 160
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=31.96 E-value=29 Score=18.39 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=13.5
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.|++||+|.+.....
T Consensus 17 eLs~~~Gd~i~v~~~~~ 33 (58)
T 1zuu_A 17 EITITPGDKISLVARDT 33 (58)
T ss_dssp BCCBCTTCCEEEEECCS
T ss_pred cccCCCCCEEEEeEcCC
Confidence 55689999999987654
No 161
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=31.89 E-value=37 Score=18.84 Aligned_cols=18 Identities=11% Similarity=0.274 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 21 eLs~~~Gd~i~v~~~~~~ 38 (73)
T 3thk_A 21 EVTMKKGDILTLLNSTNK 38 (73)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred ccCCCCCCEEEEEECCCC
Confidence 457899999999876544
No 162
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=31.85 E-value=13 Score=24.19 Aligned_cols=22 Identities=18% Similarity=0.418 Sum_probs=18.4
Q ss_pred HhhcCCCCCCEEEEEEcCCCCC
Q 043432 83 IKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 83 V~~k~L~~GD~i~f~~~~~~g~ 104 (105)
++...++.||.|.+......|+
T Consensus 38 vr~~~IkkGD~V~Vi~G~dKGk 59 (120)
T 1vq8_T 38 QRNVRVNAGDTVEVLRGDFAGE 59 (120)
T ss_dssp CSEEECCTTCEEEECSSTTTTC
T ss_pred cccccccCCCEEEEEecCCCCC
Confidence 6778899999999998776664
No 163
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=31.85 E-value=36 Score=19.30 Aligned_cols=16 Identities=31% Similarity=0.320 Sum_probs=12.8
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 34 eLsf~~Gd~i~v~~~~ 49 (78)
T 1k1z_A 34 FLRLNPGDIVELTKAE 49 (78)
T ss_dssp CCCBCTTCEEEEEECC
T ss_pred ccCCCCCCEEEEEEcC
Confidence 4568999999998863
No 164
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.80 E-value=27 Score=19.65 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+......
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (77)
T 2d8j_A 23 DLSFRAGDKLQVLDTSHE 40 (77)
T ss_dssp BCCBCTTCCEEEEECCSS
T ss_pred ccCCCCCCEEEEEECCCC
Confidence 456899999999886443
No 165
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=31.71 E-value=24 Score=21.87 Aligned_cols=16 Identities=25% Similarity=0.204 Sum_probs=12.1
Q ss_pred HHhhcCCCCCCEEEEE
Q 043432 82 FIKRYCLELGDYIMVY 97 (105)
Q Consensus 82 fV~~k~L~~GD~i~f~ 97 (105)
-+..-+|++||.|+-.
T Consensus 56 pA~~AGL~~GD~Il~V 71 (109)
T 2vsv_A 56 SASVAGAREGDYIVSI 71 (109)
T ss_dssp HHHHTTCCTTCEEEEE
T ss_pred HHHHcCCCCCCEEEEE
Confidence 4455699999999753
No 166
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.51 E-value=42 Score=19.11 Aligned_cols=18 Identities=11% Similarity=0.021 Sum_probs=13.7
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 33 eLs~~~Gd~i~v~~~~~~ 50 (79)
T 1x69_A 33 EISFDPDDIITNIEMIDD 50 (79)
T ss_dssp BCCCCTTCEEEEEEECSS
T ss_pred CcCcCCCCEEEEeEecCC
Confidence 456899999998876443
No 167
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=31.37 E-value=37 Score=19.97 Aligned_cols=20 Identities=10% Similarity=0.293 Sum_probs=14.9
Q ss_pred hhcCCCCCCEEEEEEcCCCC
Q 043432 84 KRYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~g 103 (105)
.+-.+++||+|.+.....+|
T Consensus 32 ~eLsf~~Gd~i~Vl~~~~~g 51 (83)
T 1neg_A 32 REVTMKKGDILTLLNSTNKD 51 (83)
T ss_dssp TBCCBCTTCEEEEEECCSSS
T ss_pred CccccCCCCEEEEEEecCCC
Confidence 35668999999998865443
No 168
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.32 E-value=38 Score=19.21 Aligned_cols=18 Identities=17% Similarity=0.200 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (78)
T 2yuo_A 23 ELGFRKNDIITIISQKDE 40 (78)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred CccCCCCCEEEEEEecCC
Confidence 567899999999875443
No 169
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=31.28 E-value=24 Score=21.28 Aligned_cols=16 Identities=19% Similarity=0.270 Sum_probs=12.0
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||+|+=
T Consensus 57 spA~~aGL~~GD~I~~ 72 (110)
T 1x5q_A 57 GPAARAGVRVGDKLLE 72 (110)
T ss_dssp SHHHHHTCCTTCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3455668999999874
No 170
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=31.25 E-value=23 Score=21.07 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=11.8
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
--+.+.+|++||.|+=
T Consensus 47 spA~~aGL~~GD~I~~ 62 (100)
T 1whd_A 47 GPAERAGLQQLDTVLQ 62 (100)
T ss_dssp SHHHHHTCCSSCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3445568999999873
No 171
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=31.07 E-value=20 Score=21.11 Aligned_cols=18 Identities=22% Similarity=0.344 Sum_probs=13.2
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+.....+
T Consensus 35 eLsf~~GDiI~V~~~~~~ 52 (83)
T 2ke9_A 35 ALNVRAGDVITVLEQHPD 52 (83)
T ss_dssp BCCBCTTCEEEESCSSCS
T ss_pred cccccCCCEEEEEEecCC
Confidence 456899999998765443
No 172
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=31.07 E-value=24 Score=20.91 Aligned_cols=16 Identities=31% Similarity=0.314 Sum_probs=11.8
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 56 spA~~aGl~~GD~I~~ 71 (104)
T 3sfj_A 56 GPAEIAGLQIGDKIMQ 71 (104)
T ss_dssp SHHHHHTCCTTCEEEE
T ss_pred ChHHHcCCCCCCEEEE
Confidence 3455668999999863
No 173
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=30.96 E-value=25 Score=20.51 Aligned_cols=13 Identities=31% Similarity=0.383 Sum_probs=10.4
Q ss_pred hhcCCCCCCEEEE
Q 043432 84 KRYCLELGDYIMV 96 (105)
Q Consensus 84 ~~k~L~~GD~i~f 96 (105)
++-+|++||.|+-
T Consensus 40 ~~agL~~GD~I~~ 52 (88)
T 1kwa_A 40 RQGTLHVGDEIRE 52 (88)
T ss_dssp HHTCCCTTCEEEE
T ss_pred HcCCCCCCCEEEE
Confidence 3478999999974
No 174
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=30.96 E-value=29 Score=21.16 Aligned_cols=13 Identities=15% Similarity=0.465 Sum_probs=10.8
Q ss_pred cCCCCCCEEEEEE
Q 043432 86 YCLELGDYIMVYK 98 (105)
Q Consensus 86 k~L~~GD~i~f~~ 98 (105)
++.++||.|.|..
T Consensus 36 r~~~vGD~l~l~E 48 (83)
T 3iuw_A 36 RNFQVGDILILEE 48 (83)
T ss_dssp SCCCTTCEEEEEE
T ss_pred cCCCCCCEEEEEE
Confidence 4599999999954
No 175
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=30.87 E-value=40 Score=17.93 Aligned_cols=16 Identities=25% Similarity=0.366 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 19 eLs~~~Gd~i~v~~~~ 34 (60)
T 1oot_A 19 DLPFRKGDVITILKKS 34 (60)
T ss_dssp BCCBCTTCEEEEEECC
T ss_pred EeeEcCCCEEEEEEeC
Confidence 4568999999998764
No 176
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=30.85 E-value=25 Score=21.43 Aligned_cols=18 Identities=17% Similarity=0.097 Sum_probs=13.3
Q ss_pred HHHHhhcCCCCCCEEEEE
Q 043432 80 RAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~ 97 (105)
..-+...+|++||.|+=.
T Consensus 48 ~spA~~aGL~~GD~I~~i 65 (114)
T 2edz_A 48 GSPAEKAGLLDGDRVLRI 65 (114)
T ss_dssp TCTTGGGTCCTTCEEEEE
T ss_pred CChHHHcCCCCCCEEEEE
Confidence 345566789999998743
No 177
>4glx_A DNA ligase; inhibitor, ligase-ligase inhibitor-DNA complex; HET: DNA 0XS; 1.90A {Escherichia coli}
Probab=30.84 E-value=23 Score=28.86 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=18.7
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
.+++++++|+.||.|.+.|.
T Consensus 361 ~~~I~~~di~iGD~V~V~rA 380 (586)
T 4glx_A 361 ADEIERLGLRIGDKVVIRRA 380 (586)
T ss_dssp HHHHHHHTCEETCEEEEEEE
T ss_pred HHHHHhcCCCcCCEEEEEEC
Confidence 68999999999999999985
No 178
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.84 E-value=39 Score=19.73 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=14.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||+|.+......|
T Consensus 33 eLsf~~Gd~i~v~~~~~~~ 51 (88)
T 1x2q_A 33 ELTFKHGEIIIVLDDSDAN 51 (88)
T ss_dssp CCCCCSSCEEEEEECSCSS
T ss_pred ccCCCCCCEEEEEEeCCCC
Confidence 4568999999998864443
No 179
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=30.78 E-value=35 Score=21.52 Aligned_cols=19 Identities=26% Similarity=0.344 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|+|...--+|
T Consensus 84 dt~L~dgD~V~fistlhg~ 102 (110)
T 2k9x_A 84 DYVLNDGDTVEFISTLHGG 102 (110)
T ss_dssp CCCCCSSCEEEEEECCCCC
T ss_pred ccCCCCcCEEEEeCCCccc
Confidence 4669999999998754433
No 180
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=30.76 E-value=26 Score=19.95 Aligned_cols=14 Identities=29% Similarity=0.280 Sum_probs=10.4
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 38 A~~aG~l~~GD~I~~ 52 (85)
T 2i04_A 38 AALDGKMETGDVIVS 52 (85)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 33457 999999874
No 181
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=30.46 E-value=22 Score=21.10 Aligned_cols=11 Identities=36% Similarity=0.543 Sum_probs=9.1
Q ss_pred CCCCCCEEEEE
Q 043432 87 CLELGDYIMVY 97 (105)
Q Consensus 87 ~L~~GD~i~f~ 97 (105)
+|++||+|+=.
T Consensus 17 GL~~GD~I~~I 27 (91)
T 2kjp_A 17 KIEVGDKIISA 27 (91)
T ss_dssp CCCSSCEEEEE
T ss_pred cCCCCCEEEEE
Confidence 89999998743
No 182
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=30.45 E-value=1.1e+02 Score=19.61 Aligned_cols=56 Identities=9% Similarity=-0.018 Sum_probs=33.2
Q ss_pred CCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhh-cCCCCCCEEEEEE
Q 043432 43 KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKR-YCLELGDYIMVYK 98 (105)
Q Consensus 43 ~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~-k~L~~GD~i~f~~ 98 (105)
.-|..|.+.|.++|.+-+|.+....-.+.....++-=+..-++ -+.++||.|.+--
T Consensus 55 ~~Gs~V~l~~~~~g~~~~~~iVg~~ead~~~~~IS~~SPlG~ALlGk~~GD~v~v~~ 111 (136)
T 3bmb_A 55 TMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLRVGDSIHWEL 111 (136)
T ss_dssp CTTCEEEEEETTTCCEEEEEEECGGGCCCTTTEEETTSHHHHHHTTCBTTCEEEEEE
T ss_pred EeCcEEEEEECCCCCEEEEEEEChHHcCccccEecCCCHHHHHHcCCCCCCEEEEEc
Confidence 3467889999766776666655432222222234433455544 5788999998753
No 183
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=30.41 E-value=25 Score=20.82 Aligned_cols=45 Identities=18% Similarity=0.161 Sum_probs=23.4
Q ss_pred CEEEEEEECCCCeEEEEEEEEcCCCCCcceeec-ChHHHHhhcCCCCCCEEEE
Q 043432 45 GFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFE-NTRAFIKRYCLELGDYIMV 96 (105)
Q Consensus 45 ~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~-gW~~fV~~k~L~~GD~i~f 96 (105)
...+.+........|.|.. . + . ++-. --..-+...+|++||.|+=
T Consensus 12 ~~~~~i~~~~~~~~lG~~~--~--~-G--~V~~V~~~spA~~aGL~~GD~Il~ 57 (90)
T 1y7n_A 12 VTTVLIRRPDLRYQLGFSV--Q--N-G--IICSLMRGGIAERGGVRVGHRIIE 57 (90)
T ss_dssp CEEEEEEESSTTSCCCEEE--E--T-T--EEEEECTTSHHHHHTCCSSCEEEE
T ss_pred cceEEEEeCCCccccCeEe--c--C-C--EEEEECCCCHHHHcCCCCCCEEEE
Confidence 3445555443345555543 2 1 1 3322 1233445568999999974
No 184
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=30.41 E-value=40 Score=18.92 Aligned_cols=16 Identities=13% Similarity=0.403 Sum_probs=13.1
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 18 eLs~~~Gd~i~vl~~~ 33 (69)
T 2ydl_A 18 ELTIKEGDIVTLINKD 33 (69)
T ss_dssp BCCBCTTCEEEEEESC
T ss_pred ccccCCCCEEEEEEcC
Confidence 5578999999998863
No 185
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=30.40 E-value=25 Score=21.02 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=11.4
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 53 pA~~aGL~~GD~I~~ 67 (104)
T 1wi2_A 53 DAHRAGLQEGDQVLA 67 (104)
T ss_dssp HHHHHTCCTTCEEEE
T ss_pred hHHHcCCCCCCEEEE
Confidence 344568999999874
No 186
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=30.35 E-value=27 Score=21.37 Aligned_cols=14 Identities=29% Similarity=0.461 Sum_probs=11.1
Q ss_pred HHhhcCCCCCCEEE
Q 043432 82 FIKRYCLELGDYIM 95 (105)
Q Consensus 82 fV~~k~L~~GD~i~ 95 (105)
=+.+.+|++||.|+
T Consensus 47 pA~~aGL~~GD~Il 60 (94)
T 3kzd_A 47 LASKKGLKAGDEIL 60 (94)
T ss_dssp HHHHTTCCTTCEEE
T ss_pred HHHHcCCCCCCEEE
Confidence 34567999999986
No 187
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=30.32 E-value=1.1e+02 Score=19.74 Aligned_cols=56 Identities=9% Similarity=-0.086 Sum_probs=32.8
Q ss_pred CCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhh-cCCCCCCEEEEEE
Q 043432 43 KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKR-YCLELGDYIMVYK 98 (105)
Q Consensus 43 ~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~-k~L~~GD~i~f~~ 98 (105)
.-|..|.+.|..+|.+-+|.+......+.....++-=+..-++ -+.++||.|.+--
T Consensus 58 ~~Gs~V~l~d~~~g~~~~~~iVg~~ead~~~~~IS~~SPlG~ALlGk~vGD~v~v~~ 114 (141)
T 2pn0_A 58 TMNSTVRFRVESSAEEFCLTLVYPKDVDTSGEKISILAPVGSALLGLAQGDEIEWPK 114 (141)
T ss_dssp CTTCEEEEEETTTCCEEEEEEECGGGCCSSSCEEETTSTTHHHHTTCBTTCEEEEEC
T ss_pred EeCcEEEEEECCCCCEEEEEEECHhHcCccCCEEcCCCHHHHHHcCCCCCCEEEEEc
Confidence 3467889999755776666665432222222333422444443 5788999988753
No 188
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=30.02 E-value=28 Score=19.18 Aligned_cols=16 Identities=25% Similarity=0.179 Sum_probs=12.8
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 23 eLs~~~Gd~i~v~~~~ 38 (70)
T 2cuc_A 23 ELDLQKGEGIRVLGKY 38 (70)
T ss_dssp BCCBCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEec
Confidence 5568999999998754
No 189
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=29.95 E-value=23 Score=21.01 Aligned_cols=17 Identities=12% Similarity=0.079 Sum_probs=12.6
Q ss_pred HHHhhcCCCCCCEEEEE
Q 043432 81 AFIKRYCLELGDYIMVY 97 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f~ 97 (105)
.-+...+|++||.|+=.
T Consensus 41 spA~~aGl~~GD~I~~i 57 (102)
T 2d90_A 41 SPAEAAGLKNNDLVVAV 57 (102)
T ss_dssp STTTTTTCCTTCEEEEE
T ss_pred CHHHHcCCCCCCEEEEE
Confidence 34556789999999754
No 190
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=29.88 E-value=23 Score=21.06 Aligned_cols=14 Identities=29% Similarity=0.071 Sum_probs=11.6
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
..+-+|++||.|+=
T Consensus 43 a~~aGL~~GD~I~~ 56 (96)
T 1ujv_A 43 QGCPGLCEGDLIVE 56 (96)
T ss_dssp GGSTTCCSSCEEEE
T ss_pred cccCCCCCCCEEEE
Confidence 46789999999874
No 191
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=29.87 E-value=38 Score=22.74 Aligned_cols=19 Identities=16% Similarity=0.399 Sum_probs=15.6
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.+|.| ..++||.+.||-..
T Consensus 37 rn~mr--~Mk~GD~~ffYHS~ 55 (145)
T 2gbs_A 37 KLHMV--AMRRGDRAFYYHSN 55 (145)
T ss_dssp HHHHH--HCCTTCEEEEEETT
T ss_pred HHHHH--hcCCCCEEEEEEeC
Confidence 56777 48999999999864
No 192
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=29.76 E-value=26 Score=20.91 Aligned_cols=15 Identities=27% Similarity=0.277 Sum_probs=11.2
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 55 pA~~aGl~~GD~I~~ 69 (107)
T 3qe1_A 55 AADRAGVRKGDRILE 69 (107)
T ss_dssp HHHHHTCCTTCEEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 345568999999864
No 193
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=29.64 E-value=26 Score=21.19 Aligned_cols=14 Identities=36% Similarity=0.465 Sum_probs=10.9
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||.|+=
T Consensus 48 A~~aGl~~GD~I~~ 61 (113)
T 2pzd_A 48 AHRAGLRPGDVILA 61 (113)
T ss_dssp HHHHTCCTTCEEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 44668999999873
No 194
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=29.64 E-value=28 Score=19.97 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=11.2
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 35 ~A~~aG~l~~GD~I~~ 50 (92)
T 3cyy_A 35 LAARDGNIQEGDVVLK 50 (92)
T ss_dssp HHHHSCCCCTTCEEEE
T ss_pred hHHhcCCCCCCCEEEE
Confidence 344557 999999874
No 195
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=29.60 E-value=27 Score=20.18 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=10.8
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 41 pA~~aG~L~~GD~I~~ 56 (92)
T 2qg1_A 41 IADADGRLMQGDQILM 56 (92)
T ss_dssp HHHHHTCCCTTCEEEE
T ss_pred HHHHcCCCCCCCEEEE
Confidence 344456 999999864
No 196
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=29.43 E-value=17 Score=23.86 Aligned_cols=17 Identities=24% Similarity=0.385 Sum_probs=12.8
Q ss_pred HHhhcCCCCCCEEEEEE
Q 043432 82 FIKRYCLELGDYIMVYK 98 (105)
Q Consensus 82 fV~~k~L~~GD~i~f~~ 98 (105)
-|....|++||.|.|-.
T Consensus 62 ~V~~~~l~pGDLvFf~~ 78 (135)
T 2k1g_A 62 SVSRSNLRTGDLVLFRA 78 (135)
T ss_dssp EECGGGCCTTEEEEEEE
T ss_pred EecHHHccCCcEEEECC
Confidence 45667899999987743
No 197
>1nwd_B GAD, glutamate decarboxylase; calmodulin-peptide complex, calmodulin, dimer, binding protein/hydrolase comple; NMR {Petunia x hybrida}
Probab=29.43 E-value=11 Score=18.13 Aligned_cols=13 Identities=8% Similarity=0.225 Sum_probs=10.1
Q ss_pred eecChHHHHhhcC
Q 043432 75 IFENTRAFIKRYC 87 (105)
Q Consensus 75 ~l~gW~~fV~~k~ 87 (105)
+++.|..||.++.
T Consensus 14 mitawkkfveekk 26 (28)
T 1nwd_B 14 MITAWKKFVEEKK 26 (28)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhh
Confidence 3556999998875
No 198
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=29.15 E-value=25 Score=20.52 Aligned_cols=10 Identities=40% Similarity=0.537 Sum_probs=8.9
Q ss_pred CCCCCCEEEE
Q 043432 87 CLELGDYIMV 96 (105)
Q Consensus 87 ~L~~GD~i~f 96 (105)
+|++||.|+=
T Consensus 51 gL~~GD~I~~ 60 (95)
T 1mfg_A 51 LLQPGDKIIQ 60 (95)
T ss_dssp TCCTTCEEEE
T ss_pred CCCCCCEEEE
Confidence 9999999874
No 199
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=29.13 E-value=35 Score=19.83 Aligned_cols=19 Identities=16% Similarity=0.121 Sum_probs=14.3
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|..-..+|
T Consensus 72 ~~~l~~gD~V~i~ppv~GG 90 (90)
T 2g1e_A 72 DTEIKDDDKIDLFPPVAGG 90 (90)
T ss_dssp SCBCCTTCEEEEECCTTCC
T ss_pred CcCCCCCCEEEEeCCCCCC
Confidence 3459999999998765544
No 200
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=29.12 E-value=44 Score=18.02 Aligned_cols=16 Identities=19% Similarity=0.337 Sum_probs=12.9
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 22 eLs~~~Gd~i~v~~~~ 37 (64)
T 2jte_A 22 ELTFREGEIIHLISKE 37 (64)
T ss_dssp BCCBCTTCEEEEEESC
T ss_pred ccCCCCCCEEEEEECC
Confidence 5568999999998753
No 201
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.03 E-value=28 Score=19.28 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=14.1
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.|++||+|.+......
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~ 41 (70)
T 2ega_A 23 SELSLQAGEVVDVIEKNES 41 (70)
T ss_dssp SSCCCCTTCBCEEEEECTT
T ss_pred CcccCCCCCEEEEEEccCC
Confidence 3566899999999876444
No 202
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=29.01 E-value=29 Score=20.89 Aligned_cols=16 Identities=25% Similarity=0.497 Sum_probs=11.8
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 56 spA~~aGl~~GD~I~~ 71 (109)
T 1q3o_A 56 GVAWRAGLRMGDFLIE 71 (109)
T ss_dssp SHHHHTTCCTTCEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3445568999999864
No 203
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=29.01 E-value=28 Score=20.36 Aligned_cols=14 Identities=29% Similarity=0.415 Sum_probs=10.4
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 50 A~~aG~L~~GD~I~~ 64 (98)
T 1ihj_A 50 AHLCGRLKVGDRILS 64 (98)
T ss_dssp HHHHCSCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 34456 999999874
No 204
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=28.86 E-value=28 Score=20.25 Aligned_cols=14 Identities=14% Similarity=0.166 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 42 A~~aG~L~~GD~I~~ 56 (95)
T 2vwr_A 42 AAQDGRLSSNDRVLA 56 (95)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 33455 999999864
No 205
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=28.85 E-value=28 Score=20.55 Aligned_cols=14 Identities=29% Similarity=0.323 Sum_probs=10.6
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 52 A~~aG~l~~GD~I~~ 66 (103)
T 2fcf_A 52 AGKNGTLKPGDRIVE 66 (103)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 34556 999999874
No 206
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.84 E-value=30 Score=19.35 Aligned_cols=17 Identities=12% Similarity=0.399 Sum_probs=13.1
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.+++||+|.+.....
T Consensus 25 eLs~~~Gd~i~v~~~~~ 41 (72)
T 2dl8_A 25 ELSFKKGASLLLYQRAS 41 (72)
T ss_dssp BCCBCTTCEEEEEEEEE
T ss_pred EeccCCCCEEEEEeecC
Confidence 45689999999987543
No 207
>4doi_A Chalcone--flavonone isomerase 1; chalcone-flavanone isomerase; 1.55A {Arabidopsis thaliana}
Probab=28.82 E-value=28 Score=25.22 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=19.8
Q ss_pred ecChHHHHhhcCCCCCCEEEEEEcCC
Q 043432 76 FENTRAFIKRYCLELGDYIMVYKDEL 101 (105)
Q Consensus 76 l~gW~~fV~~k~L~~GD~i~f~~~~~ 101 (105)
|..-..+.+...|++||.|.|.|...
T Consensus 143 L~~F~~~F~~~~l~kGs~I~~~~~p~ 168 (246)
T 4doi_A 143 VEKFLEIFKEETFPPGSSILFALSPT 168 (246)
T ss_dssp HHHHHHHHTTCEECTTCEEEEEECTT
T ss_pred HHHHHHHhccCcCCCCCEEEEEEeCC
Confidence 34445566777899999999999754
No 208
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.78 E-value=36 Score=18.76 Aligned_cols=16 Identities=13% Similarity=0.403 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 23 eLs~~~Gd~i~v~~~~ 38 (71)
T 2cre_A 23 ELAFSRGDILTILEQH 38 (71)
T ss_dssp BCCCCSSCCEEEEESC
T ss_pred CCCCCCCCEEEEeEcC
Confidence 4568999999998864
No 209
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=28.67 E-value=44 Score=18.58 Aligned_cols=16 Identities=13% Similarity=0.403 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 25 eLs~~~Gd~i~v~~~~ 40 (73)
T 2k9g_A 25 ELTIKEGDIVTLINKD 40 (73)
T ss_dssp BCCBCTTCEEEEEECC
T ss_pred eeeECCCCEEEEEECC
Confidence 4578999999998763
No 210
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=28.65 E-value=27 Score=21.04 Aligned_cols=19 Identities=26% Similarity=0.247 Sum_probs=13.5
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|+.-..+|
T Consensus 80 ~~~L~dGDeV~i~ppv~GG 98 (98)
T 1vjk_A 80 DEELKDGDVVGVFPPVSGG 98 (98)
T ss_dssp TCBCCTTCEEEEESCC---
T ss_pred CCCCCCCCEEEEECCCCCC
Confidence 5679999999998755443
No 211
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=28.65 E-value=45 Score=17.75 Aligned_cols=15 Identities=13% Similarity=0.186 Sum_probs=12.1
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 21 eLs~~~Gd~i~v~~~ 35 (63)
T 3eg3_A 21 TLSITKGEKLRVLGY 35 (63)
T ss_dssp BCCBCTTCEEEEEEE
T ss_pred ccCCCCCCEEEEEEe
Confidence 457899999998874
No 212
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.62 E-value=25 Score=20.91 Aligned_cols=13 Identities=15% Similarity=0.153 Sum_probs=10.0
Q ss_pred hhcCCCCCCEEEE
Q 043432 84 KRYCLELGDYIMV 96 (105)
Q Consensus 84 ~~k~L~~GD~i~f 96 (105)
++-+|++||.|+=
T Consensus 50 ~agGL~~GD~I~~ 62 (100)
T 2edp_A 50 LSQKMRTGDELVN 62 (100)
T ss_dssp HHTSCCTTCEEEE
T ss_pred HcCCCCCCCEEEE
Confidence 3349999999973
No 213
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.53 E-value=33 Score=19.48 Aligned_cols=19 Identities=11% Similarity=0.069 Sum_probs=14.0
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+.....+
T Consensus 24 ~eLs~~~Gd~i~vl~~~~~ 42 (75)
T 2egc_A 24 ETAGFQEGVSMEVLERNPN 42 (75)
T ss_dssp SSCCBCTTCEEEECEECTT
T ss_pred CcCCCCCCCEEEEEEcCCC
Confidence 3556899999999775544
No 214
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=28.51 E-value=29 Score=20.24 Aligned_cols=14 Identities=21% Similarity=0.370 Sum_probs=10.4
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 45 A~~aG~l~~GD~I~~ 59 (97)
T 2jil_A 45 ADREGTIKPGDRLLS 59 (97)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 34456 999999863
No 215
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.46 E-value=14 Score=24.17 Aligned_cols=22 Identities=14% Similarity=0.510 Sum_probs=17.1
Q ss_pred HhhcCCCCCCEEEEEEcCCCCC
Q 043432 83 IKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 83 V~~k~L~~GD~i~f~~~~~~g~ 104 (105)
++...++.||.|.+......|+
T Consensus 41 ~r~~~IkkGD~V~Vi~GkdKGk 62 (121)
T 3j21_U 41 VRNLPVRVGDKVRIMRGDYKGH 62 (121)
T ss_dssp CSEEECCSSSEEEECSSSCSSE
T ss_pred CcccccccCCEEEEeecCCCCc
Confidence 4556789999999988776663
No 216
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=28.38 E-value=24 Score=22.51 Aligned_cols=20 Identities=10% Similarity=0.082 Sum_probs=16.4
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
......+..++||+|+|--.
T Consensus 22 ~~Wa~~~~f~vGD~L~F~y~ 41 (116)
T 1x9u_A 22 ITWATGKTFRVGDELEFDFA 41 (116)
T ss_dssp HHHHTTCCEETTCEEEECCC
T ss_pred hhccccccCcCCCEEEEEec
Confidence 35688899999999999654
No 217
>3sgi_A DNA ligase; HET: DNA AMP; 3.50A {Mycobacterium tuberculosis}
Probab=28.35 E-value=23 Score=29.13 Aligned_cols=20 Identities=30% Similarity=0.409 Sum_probs=17.9
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
.+++++++++.||.|++.|.
T Consensus 371 ~d~i~~~di~iGD~V~V~rA 390 (615)
T 3sgi_A 371 ASEIKRKGVLIGDTVVIRKA 390 (615)
T ss_dssp TTTTTTTCCCBTCEEEEECC
T ss_pred HHHHHHcCCCCCCEEEEEEc
Confidence 47899999999999999884
No 218
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=28.14 E-value=28 Score=21.63 Aligned_cols=15 Identities=27% Similarity=0.293 Sum_probs=11.6
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 58 pA~~aGL~~GD~I~~ 72 (128)
T 1uf1_A 58 EAEGSGLKVGDQILE 72 (128)
T ss_dssp HHHHHTCCTTCEEEE
T ss_pred HHHHCCCCCCCEEEE
Confidence 455678999999874
No 219
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=28.12 E-value=24 Score=21.12 Aligned_cols=14 Identities=29% Similarity=0.240 Sum_probs=10.9
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+.+.+|++||.|+=
T Consensus 42 A~~aGL~~GD~I~~ 55 (103)
T 1v5l_A 42 AAAANLCPGDVILA 55 (103)
T ss_dssp TGGGTCCTTCBEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 44578999999874
No 220
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=28.04 E-value=1.1e+02 Score=20.14 Aligned_cols=55 Identities=9% Similarity=0.037 Sum_probs=33.2
Q ss_pred CCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhh-cCCCCCCEEEEE
Q 043432 43 KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKR-YCLELGDYIMVY 97 (105)
Q Consensus 43 ~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~-k~L~~GD~i~f~ 97 (105)
.-|.+|.+.|.++|.+-+|.+......+.....++-=+..-++ -+.++||.|.+-
T Consensus 87 ~~Gs~V~l~~~~~~~~~~y~iVg~~ead~~~~~IS~~SPlG~ALlGk~~GD~v~v~ 142 (158)
T 1grj_A 87 IFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIK 142 (158)
T ss_dssp CTTCEEEEEETTTTEEEEEEEECTTTCBGGGTEEESSSHHHHHHTTCBTTCEECC-
T ss_pred EeCcEEEEEECCCCCEEEEEEECHHHhCCcCCEEcCCCHHHHHHcCCCCCCEEEEE
Confidence 3467889999756777777766442223222334433555554 588899998764
No 221
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=27.84 E-value=22 Score=22.12 Aligned_cols=15 Identities=33% Similarity=0.499 Sum_probs=12.6
Q ss_pred hhcCCCCCCEEEEEE
Q 043432 84 KRYCLELGDYIMVYK 98 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~ 98 (105)
-+..|++||.|-+|+
T Consensus 70 ~d~~L~dGDRVEIyr 84 (97)
T 2hj1_A 70 LTDVLKEGDRIEIYR 84 (97)
T ss_dssp TTCBCCTTCEEEECC
T ss_pred CCccCCCCCEEEEEe
Confidence 355699999999987
No 222
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=27.83 E-value=30 Score=20.28 Aligned_cols=15 Identities=27% Similarity=0.569 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 42 pA~~aG~l~~GD~I~~ 57 (97)
T 1n7e_A 42 LAERTGAIHIGDRILA 57 (97)
T ss_dssp HHHHHTCCCTTCEEEE
T ss_pred HHHHCCCCCCCCEEEE
Confidence 344457 999999864
No 223
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.71 E-value=26 Score=19.89 Aligned_cols=17 Identities=12% Similarity=0.206 Sum_probs=12.9
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.+++||+|.+.....
T Consensus 26 eLs~~~Gd~i~v~~~~~ 42 (76)
T 2epd_A 26 ELSFRRGDVLRLHERAS 42 (76)
T ss_dssp BCEECTTCEEEEEEEEE
T ss_pred ccCCCCCCEEEEEEeCC
Confidence 45578999999987643
No 224
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=27.67 E-value=22 Score=20.38 Aligned_cols=13 Identities=31% Similarity=0.330 Sum_probs=10.1
Q ss_pred HhhcCCCCCCEEE
Q 043432 83 IKRYCLELGDYIM 95 (105)
Q Consensus 83 V~~k~L~~GD~i~ 95 (105)
.++.+|++||.|+
T Consensus 42 ~~~agl~~GD~I~ 54 (87)
T 4e34_A 42 DRCGGLHVGDAIL 54 (87)
T ss_dssp HHHSCCCTTEEEE
T ss_pred HhcCCCCCCCEEE
Confidence 3336999999986
No 225
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=27.53 E-value=35 Score=21.63 Aligned_cols=19 Identities=26% Similarity=0.282 Sum_probs=15.2
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+..|+.||.|.|..-...|
T Consensus 90 dt~L~dGDeV~iip~vaGG 108 (114)
T 1wgk_A 90 DYQLQDQDSILFISTLHGG 108 (114)
T ss_dssp TCBCCSSEEEEEEECSCCC
T ss_pred CcCCCCCCEEEEeCCCCCC
Confidence 4679999999999865554
No 226
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=27.42 E-value=27 Score=21.35 Aligned_cols=11 Identities=27% Similarity=0.464 Sum_probs=9.3
Q ss_pred CCCCCCEEEEE
Q 043432 87 CLELGDYIMVY 97 (105)
Q Consensus 87 ~L~~GD~i~f~ 97 (105)
+|++||.|+=.
T Consensus 60 GL~~GD~Il~i 70 (119)
T 2cs5_A 60 RLNEGDQVVLI 70 (119)
T ss_dssp CCCTTCEEEEE
T ss_pred CCCCCCEEEEE
Confidence 99999999743
No 227
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=27.41 E-value=45 Score=19.02 Aligned_cols=15 Identities=20% Similarity=0.142 Sum_probs=11.6
Q ss_pred cCCCCCCEEEEEEcC
Q 043432 86 YCLELGDYIMVYKDE 100 (105)
Q Consensus 86 k~L~~GD~i~f~~~~ 100 (105)
-.|++||.+.+.-..
T Consensus 59 ~~l~~GD~l~v~g~~ 73 (86)
T 3jxo_A 59 TEILSGDKLYVIVSA 73 (86)
T ss_dssp CBCCTTCEEEEEEET
T ss_pred CEECCCCEEEEEECH
Confidence 358999999987543
No 228
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=27.40 E-value=31 Score=20.02 Aligned_cols=14 Identities=29% Similarity=0.347 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 34 A~~aG~L~~GD~Il~ 48 (88)
T 3e17_A 34 ATKDGNLHEGDIILK 48 (88)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 33445 999999874
No 229
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.33 E-value=27 Score=19.36 Aligned_cols=19 Identities=26% Similarity=0.335 Sum_probs=13.8
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.|++||+|.+......
T Consensus 23 ~eLs~~~Gd~i~v~~~~~~ 41 (71)
T 2dnu_A 23 DEIGFEKGVTVEVIRKNLE 41 (71)
T ss_dssp TBCCBCTTCEEEECCCCSS
T ss_pred CCCcCCCCCEEEEeECCCC
Confidence 3456899999999775444
No 230
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.27 E-value=21 Score=21.11 Aligned_cols=12 Identities=33% Similarity=0.182 Sum_probs=10.0
Q ss_pred hcCCCCCCEEEE
Q 043432 85 RYCLELGDYIMV 96 (105)
Q Consensus 85 ~k~L~~GD~i~f 96 (105)
+-+|++||.|+=
T Consensus 45 ~agL~~GD~Il~ 56 (96)
T 2edv_A 45 HGKLFPGDQILQ 56 (96)
T ss_dssp TTTSCTTCBEEE
T ss_pred hhCCCCCCEEEE
Confidence 389999999874
No 231
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=27.21 E-value=32 Score=20.12 Aligned_cols=14 Identities=29% Similarity=0.176 Sum_probs=10.3
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 43 A~~aG~l~~GD~I~~ 57 (98)
T 2opg_A 43 ACKDGRLWAGDQILE 57 (98)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHhCCCCCCCCEEEE
Confidence 33446 999999874
No 232
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=27.17 E-value=32 Score=19.88 Aligned_cols=14 Identities=21% Similarity=0.532 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 46 A~~aG~l~~GD~I~~ 60 (94)
T 2fe5_A 46 AQKDGRLQIGDRLLA 60 (94)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 33446 999999863
No 233
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=27.16 E-value=48 Score=19.28 Aligned_cols=18 Identities=6% Similarity=0.061 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+......
T Consensus 22 eLsf~~Gd~i~vl~~~~~ 39 (84)
T 4ag1_C 22 DLSFHKGEKFQILEFGPG 39 (84)
T ss_dssp BCCBCTTCEEEEEECCSS
T ss_pred cccccCCCEEEEEEecCC
Confidence 567899999998876544
No 234
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=27.12 E-value=25 Score=19.95 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=12.5
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.+++||+|.+.....
T Consensus 26 eLsf~~Gd~i~v~~~~~ 42 (76)
T 2ed1_A 26 ELTFIEGEVIIVTGEED 42 (76)
T ss_dssp BCCCCSSCEEEESSCCS
T ss_pred CcCcCCCCEEEEEEecC
Confidence 45689999999876433
No 235
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=27.07 E-value=31 Score=20.99 Aligned_cols=12 Identities=33% Similarity=0.299 Sum_probs=9.2
Q ss_pred hcC-CCCCCEEEE
Q 043432 85 RYC-LELGDYIMV 96 (105)
Q Consensus 85 ~k~-L~~GD~i~f 96 (105)
..+ |++||.|+=
T Consensus 40 ~aG~L~~GD~Il~ 52 (106)
T 2la8_A 40 IDSKLQRGDIITK 52 (106)
T ss_dssp HHTTCCTTCEEEE
T ss_pred HCCCCCCCCEEEE
Confidence 345 999999863
No 236
>3u5e_Y L33, YL33, 60S ribosomal protein L26-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_L 2ww9_L 2wwb_L 3o5h_X 3o58_X 3u5i_Y 4b6a_Y 1s1i_U 3izc_Y 3izs_Y 3jyw_U
Probab=27.03 E-value=18 Score=23.84 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=17.7
Q ss_pred HhhcCCCCCCEEEEEEcCCCCC
Q 043432 83 IKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 83 V~~k~L~~GD~i~f~~~~~~g~ 104 (105)
+++-.++.||.|.+.+....|+
T Consensus 45 vrs~~IkkgD~V~Vi~GkdKGk 66 (127)
T 3u5e_Y 45 IKALPIRRDDEVLVVRGSKKGQ 66 (127)
T ss_dssp CCEEECCTTCEEEECSSTTTTC
T ss_pred cCcccccCCCEEEEeecCCCCc
Confidence 5677899999999988776664
No 237
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=27.02 E-value=32 Score=20.27 Aligned_cols=15 Identities=27% Similarity=0.166 Sum_probs=11.0
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 49 pA~~aG~L~~GD~I~~ 64 (101)
T 2jik_A 49 AAALDGRLQEGDKILS 64 (101)
T ss_dssp HHHHHCCCCTTCEEEE
T ss_pred HHHHCCCCCCCCEEEE
Confidence 344457 999999874
No 238
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=26.99 E-value=30 Score=22.18 Aligned_cols=17 Identities=29% Similarity=0.276 Sum_probs=12.6
Q ss_pred HHHHhhcCCCCCCEEEE
Q 043432 80 RAFIKRYCLELGDYIMV 96 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f 96 (105)
..-+...+|++||+|+=
T Consensus 74 ~spA~~aGL~~GD~I~~ 90 (139)
T 2vz5_A 74 GGPAEIAGLQIGDKIMQ 90 (139)
T ss_dssp TSHHHHHTCCTTCEEEE
T ss_pred CCHHHHCCCCCCCEEEE
Confidence 34455678999999974
No 239
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=26.96 E-value=28 Score=20.66 Aligned_cols=10 Identities=40% Similarity=0.537 Sum_probs=8.9
Q ss_pred CCCCCCEEEE
Q 043432 87 CLELGDYIMV 96 (105)
Q Consensus 87 ~L~~GD~i~f 96 (105)
+|++||.|+=
T Consensus 59 gL~~GD~I~~ 68 (103)
T 1n7t_A 59 LLQPGDKIIQ 68 (103)
T ss_dssp SCCTTCEEEE
T ss_pred CCCCCCEEEE
Confidence 9999999874
No 240
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=26.82 E-value=38 Score=20.24 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=13.3
Q ss_pred hcCCCCCCEEEEE-EcCCC
Q 043432 85 RYCLELGDYIMVY-KDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~-~~~~~ 102 (105)
+-.|++||+|.+. .....
T Consensus 39 eLsf~~Gd~i~v~~~~~~~ 57 (96)
T 1wie_A 39 ELPLTAGKYLYVYGDMDED 57 (96)
T ss_dssp BCCCCTTCEEEEESSCCSS
T ss_pred eeeECCCCEEEEeEecCCC
Confidence 4568999999998 54333
No 241
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=26.79 E-value=31 Score=20.28 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=10.8
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 48 pA~~aG~l~~GD~I~~ 63 (103)
T 1wfv_A 48 PAIRNGRMRVGDQIIE 63 (103)
T ss_dssp HHHHHCSSCTTCEEEE
T ss_pred hHHHcCCCCCCCEEEE
Confidence 344447 999999864
No 242
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=26.75 E-value=26 Score=20.83 Aligned_cols=15 Identities=13% Similarity=0.315 Sum_probs=11.4
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 41 pA~~aGL~~GD~I~~ 55 (103)
T 1wf7_A 41 KASQAHVRIGDVVLS 55 (103)
T ss_dssp HHHHTTCCTTCBEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 445568999999864
No 243
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=26.71 E-value=33 Score=21.26 Aligned_cols=14 Identities=21% Similarity=0.278 Sum_probs=10.7
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||+|+=
T Consensus 61 A~~aG~l~~GD~I~~ 75 (124)
T 1wh1_A 61 AAKDGRIREGDRIIQ 75 (124)
T ss_dssp HHHTCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 44557 999999874
No 244
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=26.70 E-value=33 Score=20.44 Aligned_cols=13 Identities=31% Similarity=0.371 Sum_probs=10.0
Q ss_pred hhcC-CCCCCEEEE
Q 043432 84 KRYC-LELGDYIMV 96 (105)
Q Consensus 84 ~~k~-L~~GD~i~f 96 (105)
...+ |++||.|+=
T Consensus 48 ~~aG~L~~GD~Il~ 61 (103)
T 1uep_A 48 DRDGRLHPGDELVY 61 (103)
T ss_dssp GGGTCCCTTCEEEE
T ss_pred HhCCCCCCCCEEEE
Confidence 3456 999999874
No 245
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=26.55 E-value=32 Score=20.78 Aligned_cols=13 Identities=31% Similarity=0.391 Sum_probs=10.2
Q ss_pred hhcCCCCCCEEEE
Q 043432 84 KRYCLELGDYIMV 96 (105)
Q Consensus 84 ~~k~L~~GD~i~f 96 (105)
...+|++||.|+=
T Consensus 49 ~~aGl~~GD~I~~ 61 (112)
T 2p3w_A 49 QRGGIQDGDIIVK 61 (112)
T ss_dssp HHHTCCTTCEEEE
T ss_pred HHCCCCCCCEEEE
Confidence 3458999999874
No 246
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=26.49 E-value=33 Score=20.47 Aligned_cols=14 Identities=21% Similarity=0.503 Sum_probs=10.3
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 46 A~~aG~L~~GD~I~~ 60 (105)
T 2awx_A 46 AHKDGKLQIGDKLLA 60 (105)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 33456 999999864
No 247
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=26.29 E-value=32 Score=21.22 Aligned_cols=17 Identities=18% Similarity=0.020 Sum_probs=12.6
Q ss_pred HHHhhcCCCCCCEEEEE
Q 043432 81 AFIKRYCLELGDYIMVY 97 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f~ 97 (105)
.-+...+|++||.|+-.
T Consensus 44 spA~~aGl~~GD~I~~i 60 (128)
T 2kjd_A 44 SPAEASGLRAQDRIVEV 60 (128)
T ss_dssp SHHHHHTCCTTCEEEEE
T ss_pred ChHHHcCCCCCCEEEEE
Confidence 34556789999998753
No 248
>4a17_S RPL26, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_S 4a1c_S 4a1e_S
Probab=26.28 E-value=19 Score=23.98 Aligned_cols=26 Identities=8% Similarity=0.404 Sum_probs=19.8
Q ss_pred hHHH-HhhcCCCCCCEEEEEEcCCCCC
Q 043432 79 TRAF-IKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 79 W~~f-V~~k~L~~GD~i~f~~~~~~g~ 104 (105)
+..| +++..++.||.|.+.+....|+
T Consensus 39 r~ky~vRs~~IkkgD~V~Vi~GkdKGk 65 (135)
T 4a17_S 39 RSKYNVRSMPVRKDDEVLIVRGKFKGN 65 (135)
T ss_dssp HHHHTCSEEECCTTCEEEECSSTTTTC
T ss_pred HHHhCCCcccccCCCEEEEeecCCCCc
Confidence 4333 6777899999999998776664
No 249
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.27 E-value=60 Score=18.21 Aligned_cols=16 Identities=19% Similarity=0.279 Sum_probs=12.9
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 26 eLs~~~Gd~i~v~~~~ 41 (77)
T 2enm_A 26 ELTVTEGEIITVTNPN 41 (77)
T ss_dssp BCCCCTTCEEEEEESC
T ss_pred eecCCCCCEEEEeEcc
Confidence 4568999999998863
No 250
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=26.26 E-value=35 Score=19.82 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=11.0
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 45 pA~~aG~l~~GD~I~~ 60 (96)
T 1d5g_A 45 AAESDGRIHKGDRVLA 60 (96)
T ss_dssp HHHHTTCCCTTCEEEE
T ss_pred hHHHcCCCCCCCEEEE
Confidence 444556 999999874
No 251
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=26.24 E-value=1.4e+02 Score=19.42 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=18.8
Q ss_pred CcceeecChHHHHhhcCCCCCCEEEE
Q 043432 71 GRMYIFENTRAFIKRYCLELGDYIMV 96 (105)
Q Consensus 71 s~~y~l~gW~~fV~~k~L~~GD~i~f 96 (105)
+-.|+|+==...+.+.++++||.|.+
T Consensus 101 ~a~~VLEl~aG~~~~~gi~~Gd~v~~ 126 (136)
T 3pjy_A 101 PVAYVLELNAGTVKRLGVSPGDRLEG 126 (136)
T ss_dssp CEEEEEEEETTHHHHHTCCTTCEEEE
T ss_pred ceeEEEEeCcChHHhcCCCCCCEEEE
Confidence 34599991123457899999999975
No 252
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=26.17 E-value=36 Score=19.43 Aligned_cols=16 Identities=25% Similarity=0.474 Sum_probs=12.7
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 33 eLsf~~Gd~i~Vl~~~ 48 (72)
T 2l0a_A 33 ELTFKAGEIITVLDDS 48 (72)
T ss_dssp BCCBCTTCEEEEEEEE
T ss_pred ccCCCCCCEEEEEEec
Confidence 4568999999998753
No 253
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=26.17 E-value=36 Score=20.79 Aligned_cols=19 Identities=16% Similarity=0.258 Sum_probs=15.4
Q ss_pred HHhhcCCCCCCEEEEEEcC
Q 043432 82 FIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 82 fV~~k~L~~GD~i~f~~~~ 100 (105)
.+..+..++||+|+|--..
T Consensus 18 Wa~~~~f~vGD~L~F~y~~ 36 (96)
T 2cbp_A 18 WPKGKRFRAGDILLFNYNP 36 (96)
T ss_dssp TTTTCCBCTTCEEEEECCT
T ss_pred hccCceEcCCCEEEEEecC
Confidence 4677889999999997653
No 254
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=26.14 E-value=33 Score=20.73 Aligned_cols=17 Identities=35% Similarity=0.524 Sum_probs=12.1
Q ss_pred HHHhhcC-CCCCCEEEEE
Q 043432 81 AFIKRYC-LELGDYIMVY 97 (105)
Q Consensus 81 ~fV~~k~-L~~GD~i~f~ 97 (105)
.-+.+.+ |++||.|+=.
T Consensus 47 spA~~aG~L~~GD~Il~I 64 (97)
T 2ejy_A 47 GMIHRQGSLHVGDEILEI 64 (97)
T ss_dssp SHHHHHTCCCTTCEEEEE
T ss_pred CHHHHcCCCCCCCEEEEE
Confidence 3445556 9999999753
No 255
>2zkr_t 60S ribosomal protein L26; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=26.13 E-value=23 Score=23.86 Aligned_cols=22 Identities=14% Similarity=0.321 Sum_probs=17.3
Q ss_pred HhhcCCCCCCEEEEEEcCCCCC
Q 043432 83 IKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 83 V~~k~L~~GD~i~f~~~~~~g~ 104 (105)
++...++.||.|.+......|+
T Consensus 44 vr~~~IkkGD~V~Vi~GkdKGk 65 (145)
T 2zkr_t 44 VRSMPIRKDDEVQVVRGHYKGQ 65 (145)
T ss_dssp C-CCBCCTTCEEEECSSTTTTC
T ss_pred ccccccCCCCEEEEeecCCCCc
Confidence 5667899999999998777664
No 256
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=26.11 E-value=32 Score=21.35 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=11.6
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-.++-+|++||.|+=
T Consensus 65 pA~~aggL~~GD~Il~ 80 (120)
T 2iwo_A 65 VAAQTQKLRVGDRIVT 80 (120)
T ss_dssp HHHHHTCCCTTCEEEE
T ss_pred HHHHhCCCCCCCEEEE
Confidence 3344559999999864
No 257
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=26.09 E-value=24 Score=20.37 Aligned_cols=12 Identities=33% Similarity=0.401 Sum_probs=9.7
Q ss_pred hcCCCCCCEEEE
Q 043432 85 RYCLELGDYIMV 96 (105)
Q Consensus 85 ~k~L~~GD~i~f 96 (105)
+-+|++||.|+=
T Consensus 46 aggl~~GD~I~~ 57 (90)
T 1qav_A 46 TEALFVGDAILS 57 (90)
T ss_dssp TTCCCTTEEEEE
T ss_pred cCCCCCCCEEEE
Confidence 349999999874
No 258
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=25.96 E-value=25 Score=20.84 Aligned_cols=14 Identities=29% Similarity=0.453 Sum_probs=10.7
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||.|+=
T Consensus 48 A~~aGL~~GD~I~~ 61 (101)
T 1uez_A 48 AEKEGLRVGDQILR 61 (101)
T ss_dssp HHHHTCCSSCCEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 44557999999874
No 259
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=25.96 E-value=43 Score=18.47 Aligned_cols=15 Identities=20% Similarity=0.321 Sum_probs=12.4
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 22 eLs~~~Gd~i~v~~~ 36 (71)
T 1u5s_A 22 ELNFEKGETMEVIEK 36 (71)
T ss_dssp BCCCCSSCCEEEEEC
T ss_pred cccCCCCCEEEEEEC
Confidence 456899999999886
No 260
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.94 E-value=41 Score=19.48 Aligned_cols=17 Identities=6% Similarity=0.043 Sum_probs=13.1
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.|++||+|.+.....
T Consensus 35 eLs~~~Gd~i~v~~~~~ 51 (85)
T 2yuq_A 35 ELALRRNEEYCLLDSSE 51 (85)
T ss_dssp BCCCCBTEEEEEEECCS
T ss_pred cCCCCCCCEEEEEEecC
Confidence 45689999999987654
No 261
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=25.93 E-value=36 Score=21.56 Aligned_cols=16 Identities=25% Similarity=0.464 Sum_probs=11.7
Q ss_pred HHhhcCCCCCCEEEEE
Q 043432 82 FIKRYCLELGDYIMVY 97 (105)
Q Consensus 82 fV~~k~L~~GD~i~f~ 97 (105)
-+...+|++||.|+=.
T Consensus 77 pA~~aGL~~GD~Il~V 92 (132)
T 3l4f_D 77 VAWRAGLRMGDFLIEV 92 (132)
T ss_dssp GGGGGTCCTTCEEEEE
T ss_pred HHHHcCCCCCCEEEEE
Confidence 3455679999998753
No 262
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=25.85 E-value=33 Score=20.77 Aligned_cols=20 Identities=10% Similarity=0.044 Sum_probs=15.7
Q ss_pred HHHhhcCCCCCCEEEEEEcC
Q 043432 81 AFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f~~~~ 100 (105)
..+..+..++||+|+|--..
T Consensus 12 ~Wa~~~~f~vGD~L~F~y~~ 31 (91)
T 1f56_A 12 NGARGKSFRAGDVLVFKYIK 31 (91)
T ss_dssp BSCTTCCBCTTCEEEEECCB
T ss_pred cCcCCccEeCCCEEEEEccC
Confidence 34677889999999996543
No 263
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=25.73 E-value=38 Score=23.38 Aligned_cols=18 Identities=22% Similarity=0.097 Sum_probs=14.4
Q ss_pred cCCCCCCEEEEEEcCCCC
Q 043432 86 YCLELGDYIMVYKDELEG 103 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~~g 103 (105)
..|.+||.|.|.+.+++|
T Consensus 138 ~~~~kGd~i~~~~~p~~~ 155 (205)
T 4doo_A 138 YKIPRNSTIDLTKDPGHV 155 (205)
T ss_dssp CCCCTTCEEEEEEETTTE
T ss_pred CCCCCCCEEEEEEcCCCc
Confidence 357899999999987644
No 264
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=25.69 E-value=48 Score=18.27 Aligned_cols=17 Identities=12% Similarity=0.389 Sum_probs=13.5
Q ss_pred hhcCCCCCCEEEEEEcC
Q 043432 84 KRYCLELGDYIMVYKDE 100 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~ 100 (105)
.+-.+++||+|.+....
T Consensus 22 ~eLs~~~Gd~i~v~~~~ 38 (70)
T 2da9_A 22 DELTIKEGDIVTLINKD 38 (70)
T ss_dssp TBCCCCTTEEEEEEECC
T ss_pred CEeeEcCCCEEEEEECC
Confidence 35678999999998763
No 265
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=25.68 E-value=34 Score=20.32 Aligned_cols=13 Identities=23% Similarity=0.370 Sum_probs=10.1
Q ss_pred hcCCCCCCEEEEE
Q 043432 85 RYCLELGDYIMVY 97 (105)
Q Consensus 85 ~k~L~~GD~i~f~ 97 (105)
+-+|++||.|+=.
T Consensus 53 ~ggl~~GD~I~~I 65 (101)
T 2yt7_A 53 SGALSIGDRLTAI 65 (101)
T ss_dssp GSSCCTTCEEEEE
T ss_pred cCCCCCCCEEEEE
Confidence 3579999998743
No 266
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=25.46 E-value=36 Score=20.28 Aligned_cols=16 Identities=19% Similarity=0.252 Sum_probs=11.6
Q ss_pred HHHhhcC--CCCCCEEEE
Q 043432 81 AFIKRYC--LELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~--L~~GD~i~f 96 (105)
.-+...+ |++||.|+=
T Consensus 54 spA~~aG~rL~~GD~Il~ 71 (107)
T 3nfk_A 54 TPADLCVPRLNEGDQVVL 71 (107)
T ss_dssp SHHHHSSSCCCTTCEEEE
T ss_pred CchHHcCCccCCCCEEEE
Confidence 3445566 999999874
No 267
>2ar1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP, unknown F; 1.60A {Leishmania major} SCOP: b.122.1.8
Probab=25.39 E-value=36 Score=23.54 Aligned_cols=19 Identities=21% Similarity=0.646 Sum_probs=15.5
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.+|.| ..++||.+.||-..
T Consensus 53 RN~mr--~Mk~GD~vfFYHS~ 71 (172)
T 2ar1_A 53 RNNMR--AMSVGDKVLFYHSN 71 (172)
T ss_dssp HHHHH--HCCTTCEEEEEECS
T ss_pred HHHHH--hcCCCCEEEEEecC
Confidence 46777 68999999999864
No 268
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=25.18 E-value=54 Score=17.65 Aligned_cols=16 Identities=13% Similarity=0.353 Sum_probs=12.4
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 23 eLs~~~Gd~i~v~~~~ 38 (65)
T 1w1f_A 23 DLSFKKGEKMKVLEEH 38 (65)
T ss_dssp CCCBCTTCEEEEEEEC
T ss_pred cCCCCCCCEEEEEEcC
Confidence 4568999999987754
No 269
>3iz5_Y 60S ribosomal protein L26 (L24P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Y
Probab=25.01 E-value=20 Score=24.34 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=20.2
Q ss_pred hHHH-HhhcCCCCCCEEEEEEcCCCCC
Q 043432 79 TRAF-IKRYCLELGDYIMVYKDELEGS 104 (105)
Q Consensus 79 W~~f-V~~k~L~~GD~i~f~~~~~~g~ 104 (105)
|..| ++.-.++.||.|.+.+....|+
T Consensus 39 R~ky~vRs~~IkKGD~V~Vi~GkdKGk 65 (150)
T 3iz5_Y 39 RHKYNVRSIPIRKDDEVQVVRGSYKGR 65 (150)
T ss_dssp HTTTTCSEEECCSSSEEEECSSTTTTC
T ss_pred HHHhCCcccccCCCCEEEEeecCCCCc
Confidence 4444 6777899999999998777664
No 270
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=24.98 E-value=36 Score=20.03 Aligned_cols=14 Identities=14% Similarity=0.140 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 47 A~~aG~L~~GD~I~~ 61 (102)
T 2i1n_A 47 AAMDGRLGVNDCVLR 61 (102)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 33445 999999863
No 271
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=24.95 E-value=37 Score=20.15 Aligned_cols=19 Identities=21% Similarity=0.230 Sum_probs=15.0
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.|++||.|-+.....+|
T Consensus 23 ei~lk~Gd~VeVl~k~~~g 41 (71)
T 1v1c_A 23 AITLREGQYVEVLDAAHPL 41 (71)
T ss_dssp BCCBCTTCEEEEEEEEETT
T ss_pred eeeecCCCEEEEEEcCCCC
Confidence 4459999999998876665
No 272
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=24.93 E-value=36 Score=20.60 Aligned_cols=15 Identities=33% Similarity=0.211 Sum_probs=10.8
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 55 pA~~aG~L~~GD~I~~ 70 (116)
T 2dm8_A 55 AAARDGRLWAGDQILE 70 (116)
T ss_dssp HHHHHTCCCTTCEEEE
T ss_pred hHHhCCCCCCCCEEEE
Confidence 344456 999999974
No 273
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=24.88 E-value=35 Score=20.43 Aligned_cols=15 Identities=20% Similarity=0.189 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 51 pA~~aG~l~~GD~I~~ 66 (111)
T 2koj_A 51 AAIQDGRLKAGDRLIE 66 (111)
T ss_dssp HHHHHCSSCTTCEEEE
T ss_pred hHHHCCCCCCCCEEEE
Confidence 344457 999999863
No 274
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=24.84 E-value=26 Score=21.66 Aligned_cols=14 Identities=29% Similarity=0.330 Sum_probs=10.6
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+...+|++||.|+=
T Consensus 49 A~~aGL~~GD~Il~ 62 (111)
T 1vae_A 49 ASLAGAKEGDYIVS 62 (111)
T ss_dssp HHHHHCCTTCEEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 34558999999863
No 275
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=24.79 E-value=32 Score=19.14 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=12.0
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.|++||+|.+...
T Consensus 24 eLs~~~Gd~i~v~~~ 38 (72)
T 1spk_A 24 LLSFAQGDVLTLLIP 38 (72)
T ss_dssp BCCBCTTCEEEECCS
T ss_pred CCcCCCCCEEEEeEc
Confidence 456899999999864
No 276
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=24.76 E-value=37 Score=19.52 Aligned_cols=15 Identities=20% Similarity=0.474 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 45 ~A~~aG~l~~GD~I~~ 60 (97)
T 2iwn_A 45 AVEHDGRIQIGDQIIA 60 (97)
T ss_dssp HHHHHCCCCTTCEEEE
T ss_pred hHHhCCCCCCCCEEEE
Confidence 444457 999999864
No 277
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=24.74 E-value=62 Score=18.81 Aligned_cols=15 Identities=20% Similarity=0.321 Sum_probs=12.6
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 33 eLs~~~Gd~i~v~~~ 47 (91)
T 1wx6_A 33 ELNFEKGETMEVIEK 47 (91)
T ss_dssp BCCCCTTCEEEEEEC
T ss_pred cccCCCCCEEEEEEC
Confidence 456899999999886
No 278
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.68 E-value=45 Score=19.53 Aligned_cols=19 Identities=16% Similarity=0.226 Sum_probs=14.5
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.|++||+|.+......
T Consensus 32 ~eLs~~~Gd~i~v~~~~~~ 50 (88)
T 2cub_A 32 DELSLIKGTKVIVMEKCSD 50 (88)
T ss_dssp TBCCCCTTEEEEEEEECTT
T ss_pred CCcCCCCCCEEEEEEccCC
Confidence 4567899999999886544
No 279
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=24.68 E-value=31 Score=18.95 Aligned_cols=14 Identities=21% Similarity=0.349 Sum_probs=11.1
Q ss_pred cCCCCCCEEEEEEc
Q 043432 86 YCLELGDYIMVYKD 99 (105)
Q Consensus 86 k~L~~GD~i~f~~~ 99 (105)
-.+++||+|.+...
T Consensus 25 Lsf~~Gd~i~v~~~ 38 (67)
T 3rnj_A 25 LSFKEGDLITLLVP 38 (67)
T ss_dssp CCBCTTCEEEECSS
T ss_pred ccCCCCCEEEEeec
Confidence 56799999998743
No 280
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=24.57 E-value=29 Score=20.68 Aligned_cols=11 Identities=18% Similarity=0.117 Sum_probs=9.4
Q ss_pred cCCCCCCEEEE
Q 043432 86 YCLELGDYIMV 96 (105)
Q Consensus 86 k~L~~GD~i~f 96 (105)
.+|++||.|+=
T Consensus 54 agl~~GD~I~~ 64 (107)
T 2h2b_A 54 GQLQENDRVAM 64 (107)
T ss_dssp TTBCTTCEEEE
T ss_pred hCCCCCCEEEE
Confidence 68999999863
No 281
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=24.55 E-value=34 Score=21.08 Aligned_cols=13 Identities=31% Similarity=0.240 Sum_probs=10.2
Q ss_pred HhhcCCCCCCEEE
Q 043432 83 IKRYCLELGDYIM 95 (105)
Q Consensus 83 V~~k~L~~GD~i~ 95 (105)
-++.+|++||.|+
T Consensus 57 ~~aggL~~GD~Il 69 (118)
T 1v6b_A 57 ERHGGVVKGDEIM 69 (118)
T ss_dssp HHHCSSCTTCEEE
T ss_pred HHcCCCCCCCEEE
Confidence 3445999999986
No 282
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=24.55 E-value=37 Score=20.98 Aligned_cols=14 Identities=29% Similarity=0.337 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+.+.+ |++||.|+=
T Consensus 66 A~~aG~L~~GD~Il~ 80 (117)
T 2fne_A 66 ASEDGRLKRGDQIIA 80 (117)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 33455 999999974
No 283
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.52 E-value=39 Score=19.31 Aligned_cols=15 Identities=20% Similarity=0.417 Sum_probs=12.3
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.|++||+|.+...
T Consensus 33 eLs~~~Gd~i~v~~~ 47 (79)
T 1x6b_A 33 EVTLQQADVVLVLQQ 47 (79)
T ss_dssp BCCCCTTEEEEEEEE
T ss_pred CcCCCCCCEEEEEEe
Confidence 466899999998775
No 284
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=24.45 E-value=27 Score=19.32 Aligned_cols=16 Identities=13% Similarity=0.314 Sum_probs=12.7
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 23 eLs~~~Gd~i~v~~~~ 38 (70)
T 2ecz_A 23 EMSFRKGERITLLRQV 38 (70)
T ss_dssp BCCCCTTCBCEEEEEE
T ss_pred CcCCCCCCEEEEEEec
Confidence 5678999999998753
No 285
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=24.34 E-value=29 Score=21.71 Aligned_cols=14 Identities=21% Similarity=0.209 Sum_probs=11.3
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
+.+-+|++||.|+=
T Consensus 52 A~~AGL~~GD~I~~ 65 (101)
T 3qik_A 52 AEVAGLQVGRKIYS 65 (101)
T ss_dssp HHHHTCCTTCBEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 46679999999864
No 286
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=24.32 E-value=36 Score=18.91 Aligned_cols=16 Identities=19% Similarity=0.266 Sum_probs=11.8
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.+++||+|.+ ....
T Consensus 26 eLs~~~Gd~i~v-~~~~ 41 (72)
T 2kgt_A 26 ELSFRAGDVFHV-ARKE 41 (72)
T ss_dssp SCBCCTTCCEEE-EEEC
T ss_pred CcCCCCCCEEEE-eeCC
Confidence 456899999999 6433
No 287
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.31 E-value=37 Score=20.36 Aligned_cols=15 Identities=33% Similarity=0.273 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 48 pA~~aG~L~~GD~I~~ 63 (110)
T 1um1_A 48 PAAADGRLSLGDRILE 63 (110)
T ss_dssp HHHHHSCCCTTCEEEE
T ss_pred hHHHcCCCCCCCEEEE
Confidence 344556 999999874
No 288
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=24.28 E-value=38 Score=19.61 Aligned_cols=13 Identities=23% Similarity=0.363 Sum_probs=9.6
Q ss_pred hhcC-CCCCCEEEE
Q 043432 84 KRYC-LELGDYIMV 96 (105)
Q Consensus 84 ~~k~-L~~GD~i~f 96 (105)
...+ |++||.|+=
T Consensus 42 ~~aG~L~~GD~I~~ 55 (93)
T 3o46_A 42 DRSGLIHVGDELRE 55 (93)
T ss_dssp HHHTCCCTTCEEEE
T ss_pred HHcCCCCCCCEEEE
Confidence 3445 999999864
No 289
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=24.26 E-value=30 Score=20.46 Aligned_cols=11 Identities=45% Similarity=0.498 Sum_probs=9.3
Q ss_pred CCCCCCEEEEE
Q 043432 87 CLELGDYIMVY 97 (105)
Q Consensus 87 ~L~~GD~i~f~ 97 (105)
+|++||.|+=.
T Consensus 21 GL~~GD~Il~I 31 (94)
T 2kl1_A 21 RLEAGDRIAAI 31 (94)
T ss_dssp TBCTTCEEEEE
T ss_pred CCCCCCEEEEE
Confidence 89999998743
No 290
>2akk_A RP4479, PHNA-like protein; beta-strand protein, structural genomics, PSI, protein struc initiative; NMR {Rhodopseudomonas palustris} SCOP: b.34.11.2
Probab=24.25 E-value=18 Score=21.78 Aligned_cols=14 Identities=36% Similarity=0.404 Sum_probs=11.7
Q ss_pred cCCCCCCEEEEEEc
Q 043432 86 YCLELGDYIMVYKD 99 (105)
Q Consensus 86 k~L~~GD~i~f~~~ 99 (105)
+-|+.||.|++.++
T Consensus 11 n~L~dGDsVtlIKD 24 (74)
T 2akk_A 11 ALLADGDNVSLIKD 24 (74)
T ss_dssp CBCCTTEEEEESSC
T ss_pred CCccCCCEEEEEee
Confidence 56899999999765
No 291
>2imz_A Endonuclease PI-MTUI; N-terminal cysteine sulfinic acid C-terminal aminosuccinimide, hydrolase; 1.70A {Mycobacterium tuberculosis}
Probab=24.15 E-value=30 Score=22.66 Aligned_cols=18 Identities=17% Similarity=-0.020 Sum_probs=14.9
Q ss_pred ChHHHHhhcCCCCCCEEEEEE
Q 043432 78 NTRAFIKRYCLELGDYIMVYK 98 (105)
Q Consensus 78 gW~~fV~~k~L~~GD~i~f~~ 98 (105)
|| +++..|++||.|.+-+
T Consensus 80 gw---~~a~~L~~Gd~v~~~~ 97 (168)
T 2imz_A 80 GW---RAAGELRKGDRVAQPR 97 (168)
T ss_dssp EE---EEGGGCCTTCEEECCB
T ss_pred CC---EEHHHCCCCCEEEEec
Confidence 57 6899999999997654
No 292
>3eop_A Thymocyte nuclear protein 1; unknown function, nucleus, phosphoprotein; 2.30A {Homo sapiens} SCOP: b.122.1.0
Probab=24.15 E-value=63 Score=22.39 Aligned_cols=19 Identities=26% Similarity=0.730 Sum_probs=15.8
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.+|.|+ .+.||.+.||-..
T Consensus 46 RN~mR~--Mk~GD~~fFYHSn 64 (176)
T 3eop_A 46 RNFLRA--MKLGEEAFFYHSN 64 (176)
T ss_dssp HHHHHH--CCTTCEEEEEECC
T ss_pred HHHHHh--cCCCCEEEEEecC
Confidence 567775 8999999999864
No 293
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=24.15 E-value=39 Score=20.17 Aligned_cols=13 Identities=31% Similarity=0.314 Sum_probs=9.9
Q ss_pred hhcCCCCCCEEEE
Q 043432 84 KRYCLELGDYIMV 96 (105)
Q Consensus 84 ~~k~L~~GD~i~f 96 (105)
++-+|++||.|+=
T Consensus 56 ~aggL~~GD~Il~ 68 (107)
T 1uhp_A 56 KEGGLQIHDRIIE 68 (107)
T ss_dssp HTTCCCSSCEEEE
T ss_pred HcCCCCCCCEEEE
Confidence 3348999999863
No 294
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=24.12 E-value=31 Score=21.64 Aligned_cols=15 Identities=33% Similarity=0.273 Sum_probs=11.4
Q ss_pred HHhhcCCCCCCEEEE
Q 043432 82 FIKRYCLELGDYIMV 96 (105)
Q Consensus 82 fV~~k~L~~GD~i~f 96 (105)
-+...+|++||.|+=
T Consensus 63 pA~~aGL~~GD~Il~ 77 (124)
T 3tsv_A 63 PAAKEGLEEGDQILR 77 (124)
T ss_dssp HHHHTTCCTTEEEEE
T ss_pred HHHHcCCCCCCEEEE
Confidence 445568999999874
No 295
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=24.09 E-value=31 Score=18.95 Aligned_cols=17 Identities=18% Similarity=0.262 Sum_probs=12.6
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.+++||+|.+.....
T Consensus 24 eLs~~~Gd~i~v~~~~~ 40 (67)
T 1aww_A 24 DLQLRKGDEYFILEESN 40 (67)
T ss_dssp SCCCCSSCEEECCCCCS
T ss_pred CccCCCCCEEEEEEccC
Confidence 45688999998876543
No 296
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=24.09 E-value=33 Score=21.67 Aligned_cols=15 Identities=27% Similarity=0.067 Sum_probs=11.7
Q ss_pred HhhcCCCCCCEEEEE
Q 043432 83 IKRYCLELGDYIMVY 97 (105)
Q Consensus 83 V~~k~L~~GD~i~f~ 97 (105)
.++-+|++||.|+=.
T Consensus 45 ~~~aGL~~GD~Il~V 59 (113)
T 3soe_A 45 QWCQGLQKGDIIKEI 59 (113)
T ss_dssp GGSTTCCTTCEEEEE
T ss_pred HHhCCCCCCCEEEEE
Confidence 356899999998743
No 297
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.07 E-value=29 Score=21.65 Aligned_cols=15 Identities=27% Similarity=0.328 Sum_probs=11.3
Q ss_pred HhhcCCCCCCEEEEE
Q 043432 83 IKRYCLELGDYIMVY 97 (105)
Q Consensus 83 V~~k~L~~GD~i~f~ 97 (105)
+.+.+|++||.|+=.
T Consensus 57 A~~aGL~~GD~Il~I 71 (114)
T 2d8i_A 57 ASKKGLKAGDEILEI 71 (114)
T ss_dssp HHHHTCCTTCCEEEE
T ss_pred HHHcCCCCCCEEEEE
Confidence 445689999998643
No 298
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=24.02 E-value=27 Score=20.56 Aligned_cols=11 Identities=36% Similarity=0.377 Sum_probs=8.9
Q ss_pred hcC-CCCCCEEE
Q 043432 85 RYC-LELGDYIM 95 (105)
Q Consensus 85 ~k~-L~~GD~i~ 95 (105)
..+ |++||.|+
T Consensus 46 ~aG~L~~GD~I~ 57 (96)
T 2qkv_A 46 IDSKLQRGDIIT 57 (96)
T ss_dssp HHHHCCTTCEEE
T ss_pred hcCCCCCCCEEE
Confidence 345 99999986
No 299
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=24.01 E-value=38 Score=20.79 Aligned_cols=16 Identities=19% Similarity=-0.041 Sum_probs=11.5
Q ss_pred HHHhhcC-CCCCCEEEE
Q 043432 81 AFIKRYC-LELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~-L~~GD~i~f 96 (105)
.-+...+ |++||.|+=
T Consensus 61 spA~~aG~L~~GD~I~~ 77 (114)
T 2gzv_A 61 TPAALDGTVAAGDEITG 77 (114)
T ss_dssp SHHHHHCCCCTTCEEEE
T ss_pred ChHHHCCCCCCCCEEEE
Confidence 3444557 999999874
No 300
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=24.00 E-value=31 Score=19.69 Aligned_cols=19 Identities=11% Similarity=0.261 Sum_probs=13.9
Q ss_pred hcCCCCCCEEEEEEcCCCC
Q 043432 85 RYCLELGDYIMVYKDELEG 103 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~g 103 (105)
+-.+++||+|.+......|
T Consensus 7 eLs~~~Gd~i~v~~~~~~~ 25 (77)
T 2jmc_A 7 EVTMKKGDILTLLNSTNKD 25 (77)
T ss_dssp CCCCCTTCEEECCCCCCSS
T ss_pred ccCCCCCCEEEEEEecCCC
Confidence 3468999999998765443
No 301
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=23.97 E-value=29 Score=19.44 Aligned_cols=18 Identities=22% Similarity=0.211 Sum_probs=13.3
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (73)
T 2dbm_A 23 ELGFKEGDIITLTNQIDE 40 (73)
T ss_dssp CCCBCTTCEEECCBCSSS
T ss_pred CccCCCCCEEEEEEecCC
Confidence 556889999998775443
No 302
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.96 E-value=38 Score=20.16 Aligned_cols=14 Identities=29% Similarity=0.532 Sum_probs=10.3
Q ss_pred hhcC-CCCCCEEEEE
Q 043432 84 KRYC-LELGDYIMVY 97 (105)
Q Consensus 84 ~~k~-L~~GD~i~f~ 97 (105)
...+ |++||.|+=.
T Consensus 52 ~~aG~L~~GD~I~~v 66 (105)
T 1wha_A 52 HRAGTLQVGDRVLSI 66 (105)
T ss_dssp HHHSSCCTTCEEEEE
T ss_pred HHcCCCCCCCEEEEE
Confidence 3456 9999999743
No 303
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.93 E-value=34 Score=20.11 Aligned_cols=16 Identities=13% Similarity=0.281 Sum_probs=12.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.|++||+|.+....
T Consensus 33 eLsf~~Gd~i~v~~~~ 48 (90)
T 2yup_A 33 ELSFRKGEHICLIRKV 48 (90)
T ss_dssp BCCCCTTCEEEESSCC
T ss_pred cCCCCCCCEEEEEEEc
Confidence 3568899999887643
No 304
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=23.90 E-value=34 Score=20.66 Aligned_cols=15 Identities=33% Similarity=0.395 Sum_probs=11.2
Q ss_pred HhhcCCCCCCEEEEE
Q 043432 83 IKRYCLELGDYIMVY 97 (105)
Q Consensus 83 V~~k~L~~GD~i~f~ 97 (105)
+...+|++||.|+=.
T Consensus 54 A~~aGL~~GD~Il~v 68 (114)
T 1x5n_A 54 SAEVGLEIGDQIVEV 68 (114)
T ss_dssp TTTTTCCTTCEEEEE
T ss_pred HHHcCCCCCCEEEEE
Confidence 445589999998743
No 305
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=23.84 E-value=39 Score=20.32 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.6
Q ss_pred hhcC-CCCCCEEEE
Q 043432 84 KRYC-LELGDYIMV 96 (105)
Q Consensus 84 ~~k~-L~~GD~i~f 96 (105)
...+ |++||.|+=
T Consensus 46 ~~aG~L~~GD~Il~ 59 (106)
T 4amh_A 46 HKDGKLQIGDKLLA 59 (106)
T ss_dssp HHHCCCCTTCEEEE
T ss_pred HHCCCCCCCCEEEE
Confidence 3445 999999863
No 306
>2w1t_A Spovt, stage V sporulation protein T; transcription, transcription regulation, repressor, activator, DNA-binding; 2.60A {Bacillus subtilis} PDB: 2w1t_B 2ro5_A
Probab=23.80 E-value=81 Score=21.73 Aligned_cols=22 Identities=14% Similarity=0.283 Sum_probs=18.3
Q ss_pred HHHHhhcCCCCCCEEEEEEcCC
Q 043432 80 RAFIKRYCLELGDYIMVYKDEL 101 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~~ 101 (105)
.+.-+.-+|++||.|.|+-+.+
T Consensus 20 keiR~~LgI~~GD~l~~~~~~d 41 (178)
T 2w1t_A 20 KEIRRTLRIREGDPLEIFVDRD 41 (178)
T ss_dssp HHHHHHTTCCTTCEEEEEECTT
T ss_pred HHHHHHcCcCCCCEEEEEEeCC
Confidence 4777888999999999988643
No 307
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=23.77 E-value=39 Score=20.49 Aligned_cols=15 Identities=27% Similarity=0.246 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 61 pA~~aG~l~~GD~Il~ 76 (117)
T 2o2t_A 61 VAHRDGRLKETDQILA 76 (117)
T ss_dssp HHHHHCCCCTTCEEEE
T ss_pred HHHHCCCCCCCCEEEE
Confidence 344556 999999864
No 308
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=23.71 E-value=39 Score=20.38 Aligned_cols=12 Identities=25% Similarity=0.357 Sum_probs=9.1
Q ss_pred hcCCCCCCEEEE
Q 043432 85 RYCLELGDYIMV 96 (105)
Q Consensus 85 ~k~L~~GD~i~f 96 (105)
+-.|++||.|+=
T Consensus 49 aG~L~~GD~Il~ 60 (108)
T 3cbz_A 49 DGRIEPGDMLLQ 60 (108)
T ss_dssp HCCCCTTCEEEE
T ss_pred cCCCCCCCEEEE
Confidence 334999999874
No 309
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=23.57 E-value=38 Score=20.32 Aligned_cols=13 Identities=38% Similarity=0.488 Sum_probs=9.8
Q ss_pred hhcC-CCCCCEEEE
Q 043432 84 KRYC-LELGDYIMV 96 (105)
Q Consensus 84 ~~k~-L~~GD~i~f 96 (105)
...+ |++||.|+=
T Consensus 52 ~~aG~l~~GD~I~~ 65 (111)
T 2dlu_A 52 DRDGRLQTGDHILK 65 (111)
T ss_dssp HHHTCCCSSCEEEE
T ss_pred HHcCCCCCCCEEEE
Confidence 3446 999999864
No 310
>2yuj_A Ubiquitin fusion degradation 1-like; ubiquitin-dependent proteolytic, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.47 E-value=1.9e+02 Score=20.06 Aligned_cols=76 Identities=17% Similarity=0.280 Sum_probs=41.5
Q ss_pred cCCCCCCCcEEeehhhhhccCCCCCCCCCEEEEEEECCCCeEEE-EEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEE
Q 043432 17 NSDVNAAGRIVLPKKLAETYLPPVNEKAGFWMHLEDMDFNKVWT-FKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIM 95 (105)
Q Consensus 17 ~SDv~~~~rl~iPk~~ae~~lP~l~~~~~~~l~~~D~~~g~~W~-fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~ 95 (105)
..++..++++++|...++.. -.++-.....+.+....+++.=+ =..-|- .....-+|-.| ..+.-+|++||.|.
T Consensus 34 r~~~~~GdKI~LP~SaL~~L-~~~~i~~Pm~F~l~n~~~~r~th~GVlEFs--A~EG~i~lP~w--mm~~L~l~~gd~V~ 108 (190)
T 2yuj_A 34 RSDVEKGGKIIMPPSALDQL-SRLNITYPMLFKLTNKNSDRMTHCGVLEFV--ADEGICYLPHW--MMQNLLLEEGGLVQ 108 (190)
T ss_dssp CSTTTTTTEEECCHHHHHHH-HHTTCCSSCEEEEEETTTTEEEEEEEEECC--CBTTBEECCSH--HHHHHTCCTTEEEE
T ss_pred ccccCCCCeEECcHHHHHHH-HHCCCCcCeEEEEecCCCCceEEEEEEEEe--cCCCeEEeCHH--HHHhcCCCCCCEEE
Confidence 46777788999997665542 11222233566666654333211 001111 22333455677 35677889999988
Q ss_pred EE
Q 043432 96 VY 97 (105)
Q Consensus 96 f~ 97 (105)
+-
T Consensus 109 v~ 110 (190)
T 2yuj_A 109 VE 110 (190)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 311
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=23.42 E-value=27 Score=19.21 Aligned_cols=18 Identities=11% Similarity=0.381 Sum_probs=12.8
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 26 eLs~~~Gd~i~v~~~~~~ 43 (68)
T 1s1n_A 26 DLTFKKGEILLVIEKKPD 43 (68)
T ss_dssp CCCBCSSEEEEECSCCSS
T ss_pred cCCCCCCCEEEEEEcCCC
Confidence 456789999988765433
No 312
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=23.31 E-value=67 Score=19.28 Aligned_cols=19 Identities=5% Similarity=0.200 Sum_probs=14.0
Q ss_pred hhcCCCCCCEEEEEEcCCC
Q 043432 84 KRYCLELGDYIMVYKDELE 102 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~~~~~ 102 (105)
.+-.+++||+|.+......
T Consensus 42 ~eLs~~~Gd~i~v~~~~~~ 60 (109)
T 2yt6_A 42 EDLSFKKGERFQIINNTEG 60 (109)
T ss_dssp TSCCCCTTCEEEEEECSCT
T ss_pred CccCCCCCCEEEEEEccCC
Confidence 3456899999999875443
No 313
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.26 E-value=52 Score=18.67 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=12.6
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 33 eLsf~~Gd~i~v~~~~ 48 (80)
T 2d8h_A 33 DLNFQAGDRITVISKT 48 (80)
T ss_dssp BCEECTTCEEEEEECC
T ss_pred eeeEcCCCEEEEeECc
Confidence 4457899999998864
No 314
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.23 E-value=31 Score=20.54 Aligned_cols=16 Identities=13% Similarity=0.059 Sum_probs=11.9
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
.-+...+|++||.|+=
T Consensus 43 spA~~aGl~~GD~I~~ 58 (106)
T 2eei_A 43 GVAMRAGVLADDHLIE 58 (106)
T ss_dssp SHHHHHTCCSSEEEEE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3455568999999874
No 315
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.12 E-value=38 Score=19.78 Aligned_cols=14 Identities=29% Similarity=0.332 Sum_probs=10.3
Q ss_pred hhcCCCCCCEEEEE
Q 043432 84 KRYCLELGDYIMVY 97 (105)
Q Consensus 84 ~~k~L~~GD~i~f~ 97 (105)
++-+|++||.|+-.
T Consensus 44 ~ag~L~~GD~I~~i 57 (91)
T 2e7k_A 44 QQGLLHVGDIIKEV 57 (91)
T ss_dssp HHCCCCTTCEEEEE
T ss_pred HcCCCCCCCEEEEE
Confidence 33459999999753
No 316
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=23.12 E-value=43 Score=20.32 Aligned_cols=15 Identities=27% Similarity=0.377 Sum_probs=11.0
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+..-+ |++||.|+=
T Consensus 61 pA~~aG~L~~GD~Il~ 76 (112)
T 2r4h_A 61 PAERSGKMRIGDEILE 76 (112)
T ss_dssp HHHHTTCCCTTCEEEE
T ss_pred hHHHcCCCCCCCEEEE
Confidence 444557 999999864
No 317
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=23.03 E-value=34 Score=21.67 Aligned_cols=18 Identities=11% Similarity=0.128 Sum_probs=14.0
Q ss_pred CcEEeehhhhhccCCCCC
Q 043432 24 GRIVLPKKLAETYLPPVN 41 (105)
Q Consensus 24 ~rl~iPk~~ae~~lP~l~ 41 (105)
-+|.||-+.|..+++.|.
T Consensus 4 igFAIP~~~~~~v~~~L~ 21 (134)
T 2l97_A 4 LGFAIPANDAINIIEQLE 21 (134)
T ss_dssp CCCCCCCCCCCCCCCCCC
T ss_pred EEEEeEHHHHHHHHHHHH
Confidence 368899888887887774
No 318
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.96 E-value=31 Score=21.02 Aligned_cols=16 Identities=25% Similarity=0.420 Sum_probs=11.7
Q ss_pred HHHhhcCCCCCCEEEE
Q 043432 81 AFIKRYCLELGDYIMV 96 (105)
Q Consensus 81 ~fV~~k~L~~GD~i~f 96 (105)
--+...+|++||.|+=
T Consensus 53 spA~~aGL~~GD~Il~ 68 (117)
T 1uit_A 53 SIAHQAGLEYGDQLLE 68 (117)
T ss_dssp SHHHHHTCCTTCEECE
T ss_pred CHHHHcCCCCCCEEEE
Confidence 3445568999999863
No 319
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.93 E-value=60 Score=18.62 Aligned_cols=17 Identities=12% Similarity=0.239 Sum_probs=12.8
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.+++||+|.+.....
T Consensus 33 eLsf~~Gd~i~v~~~~~ 49 (81)
T 1x6g_A 33 ELAFRKGDVVTILEACE 49 (81)
T ss_dssp CCCBCTTCEEEEEECCC
T ss_pred CCCCCCCCEEEEEeccC
Confidence 34589999999987543
No 320
>1eyq_A Chalcone-flavonone isomerase 1; chalcone isomerase, flavonoid; HET: NAR; 1.85A {Medicago sativa} SCOP: d.36.1.1 PDB: 1eyp_A* 1fm7_A* 1fm8_A* 1jep_A* 1jx0_A* 1jx1_A*
Probab=22.93 E-value=42 Score=23.69 Aligned_cols=24 Identities=8% Similarity=-0.011 Sum_probs=18.0
Q ss_pred ChHHHHhhcCCCCCCEEEEEEcCC
Q 043432 78 NTRAFIKRYCLELGDYIMVYKDEL 101 (105)
Q Consensus 78 gW~~fV~~k~L~~GD~i~f~~~~~ 101 (105)
.-..+.+.+.+.+||.|.|.+.++
T Consensus 134 ~f~~~F~~~~~~kG~~i~~~~~p~ 157 (222)
T 1eyq_A 134 KFAEAFKPVNFPPGASVFYRQSPD 157 (222)
T ss_dssp HHHHHHTTCEECTTCEEEEEEETT
T ss_pred HHHHHhCCCCCCCCCEEEEEEcCC
Confidence 344555666799999999998654
No 321
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.77 E-value=43 Score=20.69 Aligned_cols=15 Identities=27% Similarity=0.257 Sum_probs=10.8
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 56 pA~~aG~L~~GD~Il~ 71 (123)
T 1ueq_A 56 PAAQDGKMETGDVIVY 71 (123)
T ss_dssp HHHHTSCCCTTCEEEE
T ss_pred HHHHCCCCCCCCEEEE
Confidence 334456 999999864
No 322
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=22.77 E-value=42 Score=19.92 Aligned_cols=15 Identities=20% Similarity=0.171 Sum_probs=10.7
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 50 pA~~aG~L~~GD~I~~ 65 (106)
T 3axa_A 50 AADVDGRLAAGDQLLS 65 (106)
T ss_dssp HHHHHCCCCTTCEEEE
T ss_pred HHHHcCCCCCCCEEEE
Confidence 334456 999999874
No 323
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.70 E-value=34 Score=20.27 Aligned_cols=15 Identities=33% Similarity=0.527 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 50 pA~~aG~l~~GD~I~~ 65 (104)
T 2djt_A 50 PAQRCGRLEVGDLVLH 65 (104)
T ss_dssp HHHHHCSCCTTCBEEE
T ss_pred HHHHcCCCCCCCEEEE
Confidence 344456 999999874
No 324
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.66 E-value=31 Score=19.90 Aligned_cols=10 Identities=30% Similarity=0.508 Sum_probs=8.5
Q ss_pred CCCCCCEEEE
Q 043432 87 CLELGDYIMV 96 (105)
Q Consensus 87 ~L~~GD~i~f 96 (105)
+|++||.|+=
T Consensus 48 gl~~GD~I~~ 57 (93)
T 2dkr_A 48 GLKRGDQLLS 57 (93)
T ss_dssp CCCTTCBEEE
T ss_pred CCCCCCEEEE
Confidence 5999999874
No 325
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=22.59 E-value=1.2e+02 Score=18.10 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=27.4
Q ss_pred CEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEEEE
Q 043432 45 GFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMVYK 98 (105)
Q Consensus 45 ~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f~~ 98 (105)
|..+.+.|.+ + +....++. +.|+.. -..+|....|++|+.|.+-.
T Consensus 22 G~v~e~~dd~--~-----~iVkss~g-~~~~V~-v~~~Vd~~~LkpG~rVaLn~ 66 (85)
T 3h43_A 22 GTVVDKVGER--K-----VVVKSSTG-PSFLVN-VSHFVNPDDLAPGKRVCLNQ 66 (85)
T ss_dssp EEEEEEEETT--E-----EEEEETTS-SEEEEE-BCTTSCGGGCCTTCEEEECT
T ss_pred EEEEEEcCCC--E-----EEEEeCCC-CeEEEE-ecCccCHHHCCCCCEEEECC
Confidence 3455666653 2 23332233 345444 35789999999999998754
No 326
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=22.45 E-value=42 Score=20.92 Aligned_cols=15 Identities=27% Similarity=0.217 Sum_probs=11.0
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 71 pA~~aG~L~~GD~Il~ 86 (123)
T 2iwq_A 71 PAGKNGTLKPGDRIVE 86 (123)
T ss_dssp HHHHHCCCCTTCEEEE
T ss_pred hHHHcCCCCCCCEEEE
Confidence 344556 999999874
No 327
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=22.42 E-value=25 Score=19.95 Aligned_cols=18 Identities=28% Similarity=0.241 Sum_probs=13.2
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.|++||+|.+......
T Consensus 26 eLs~~~Gd~i~v~~~~~~ 43 (76)
T 1ujy_A 26 ELSVCKGDIIYVTRVEEG 43 (76)
T ss_dssp SCCBCSSCCEEESSCCSS
T ss_pred cccCCCCCEEEEEEecCC
Confidence 456889999998765443
No 328
>3dm3_A Replication factor A; probably plays AN essential for replication of the chromosome, DNA recombination and repair; 2.40A {Methanocaldococcus jannaschii}
Probab=22.39 E-value=1.3e+02 Score=18.40 Aligned_cols=32 Identities=19% Similarity=0.406 Sum_probs=20.8
Q ss_pred EEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhhcCCCCCCEEEE
Q 043432 47 WMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKRYCLELGDYIMV 96 (105)
Q Consensus 47 ~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~k~L~~GD~i~f 96 (105)
.+.+.|. +| +.+.+.| .+-+.. .|++||+|.|
T Consensus 44 ~~~l~D~-TG---~IrvtlW-------------~~~a~~-~l~~Gdvv~i 75 (105)
T 3dm3_A 44 SFIVRDE-TG---SIRVTLW-------------DNLTDI-DVGRGDYVRV 75 (105)
T ss_dssp EEEEEET-TE---EEEEEEE-------------GGGGGS-CCCTTCEEEE
T ss_pred EEEEECC-CC---cEEEEEE-------------Cccccc-ccCCCCEEEE
Confidence 4566776 56 3566666 222222 8999999998
No 329
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=22.39 E-value=34 Score=20.15 Aligned_cols=15 Identities=27% Similarity=0.169 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 47 pA~~aG~l~~GD~I~~ 62 (104)
T 3i4w_A 47 PADLSGELRKGDQILS 62 (104)
T ss_dssp HHHHHCCCCTTEEEEE
T ss_pred hHHhcCCCCCCCEEEE
Confidence 344456 999999874
No 330
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=22.36 E-value=32 Score=20.90 Aligned_cols=11 Identities=36% Similarity=0.558 Sum_probs=9.6
Q ss_pred cCCCCCCEEEE
Q 043432 86 YCLELGDYIMV 96 (105)
Q Consensus 86 k~L~~GD~i~f 96 (105)
.+|++||.|+=
T Consensus 60 agL~~GD~I~~ 70 (114)
T 1uew_A 60 AKLKVGDRILA 70 (114)
T ss_dssp SSCCTTCBEEE
T ss_pred CCCCCCCEEEE
Confidence 69999999874
No 331
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=22.30 E-value=61 Score=18.34 Aligned_cols=17 Identities=0% Similarity=-0.019 Sum_probs=13.2
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.|++||+|.+.....
T Consensus 29 eLs~~~Gd~i~vl~~~~ 45 (79)
T 1uhc_A 29 ELSVSANQKLKILEFKD 45 (79)
T ss_dssp BCCBCTTCEEEEEESCC
T ss_pred ccCCCCCCEEEEEECCC
Confidence 45689999999988643
No 332
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.28 E-value=42 Score=22.77 Aligned_cols=16 Identities=25% Similarity=0.098 Sum_probs=12.9
Q ss_pred cCCCCCCEEEEEEcCC
Q 043432 86 YCLELGDYIMVYKDEL 101 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~ 101 (105)
..|++||.|.|+.+.+
T Consensus 116 ~~l~~Gd~ig~~~~~~ 131 (170)
T 2e63_A 116 DQLGEGDRVGVERTVA 131 (170)
T ss_dssp GGCCSSCCEEEEECTT
T ss_pred cccCCCCEEEEEEcCC
Confidence 4578999999998743
No 333
>2v31_A Ubiquitin-activating enzyme E1 X; ligase, phosphorylation, catalytic domain, heteronuclear first catalytic cysteine half-domain, E1 protein; NMR {Mus musculus}
Probab=22.25 E-value=40 Score=21.50 Aligned_cols=14 Identities=29% Similarity=0.494 Sum_probs=12.2
Q ss_pred hhcCCCCCCEEEEE
Q 043432 84 KRYCLELGDYIMVY 97 (105)
Q Consensus 84 ~~k~L~~GD~i~f~ 97 (105)
..++|+.||.|.|.
T Consensus 38 ~~H~l~dGD~V~Fs 51 (112)
T 2v31_A 38 ARHGFETGDFVSFS 51 (112)
T ss_dssp CCCCCCTTCEEEEC
T ss_pred CccCCcCCCEEEEE
Confidence 67899999999984
No 334
>2wnv_C C1Q chain C, complement C1Q subcomponent subunit C; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_C 2wnu_C* 2jg9_C* 1pk6_C
Probab=22.24 E-value=29 Score=22.12 Aligned_cols=16 Identities=13% Similarity=0.351 Sum_probs=12.2
Q ss_pred cCCCCCCEEEEEEcCC
Q 043432 86 YCLELGDYIMVYKDEL 101 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~ 101 (105)
-.|++||.|-+.-...
T Consensus 95 L~L~~GD~V~v~~~~~ 110 (131)
T 2wnv_C 95 LRLQVGEEVWLAVNDY 110 (131)
T ss_dssp EEECTTCEEEEEEEEE
T ss_pred EEECCCCEEEEEEeCC
Confidence 3799999998876543
No 335
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=22.21 E-value=43 Score=20.58 Aligned_cols=14 Identities=21% Similarity=0.544 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 67 A~~aG~L~~GD~Il~ 81 (117)
T 2byg_A 67 AQKDGRLQVGDRLLM 81 (117)
T ss_dssp HHHHCCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 33456 999999863
No 336
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=22.12 E-value=35 Score=21.61 Aligned_cols=18 Identities=22% Similarity=0.124 Sum_probs=15.0
Q ss_pred HHhhcCCCCCCEEEEEEc
Q 043432 82 FIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 82 fV~~k~L~~GD~i~f~~~ 99 (105)
++++..|++||.|...+.
T Consensus 81 w~~a~~L~~Gd~v~~~~~ 98 (139)
T 2in0_A 81 WRAAGELRKGDRVAVRDV 98 (139)
T ss_dssp EEEGGGCCTTCEEEEECT
T ss_pred cEEHHHCCCCCEEEeCCC
Confidence 368999999999988754
No 337
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.08 E-value=72 Score=17.68 Aligned_cols=15 Identities=13% Similarity=0.257 Sum_probs=12.6
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 24 eLsf~~Gd~i~v~~~ 38 (73)
T 2dl7_A 24 ELSFPEGAIIRILNK 38 (73)
T ss_dssp BCCBCTTCEEEEEEC
T ss_pred cCCCCCCCEEEEEEC
Confidence 466899999999886
No 338
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=22.06 E-value=31 Score=20.67 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=10.2
Q ss_pred hhcCCCCCCEEEE
Q 043432 84 KRYCLELGDYIMV 96 (105)
Q Consensus 84 ~~k~L~~GD~i~f 96 (105)
++-+|++||.|+=
T Consensus 50 ~a~gL~~GD~Il~ 62 (103)
T 2dc2_A 50 RCGGLHVGDAILA 62 (103)
T ss_dssp HHTCCCSSEEEEE
T ss_pred HhCCCCCCCEEEE
Confidence 3359999999874
No 339
>2wnv_A C1Q chain A, complement C1Q subcomponent subunit A; immune system, secreted, collagen, recognition, disulfide bond, innate immunity; HET: NAG; 1.25A {Homo sapiens} PDB: 2jg8_A 2wnu_A* 2jg9_A* 1pk6_A
Probab=22.01 E-value=25 Score=22.51 Aligned_cols=16 Identities=38% Similarity=0.405 Sum_probs=12.2
Q ss_pred cCCCCCCEEEEEEcCC
Q 043432 86 YCLELGDYIMVYKDEL 101 (105)
Q Consensus 86 k~L~~GD~i~f~~~~~ 101 (105)
-.|++||.|-+.-...
T Consensus 96 L~L~~GD~V~l~~~~~ 111 (134)
T 2wnv_A 96 LQLQQGDQVWVEKDPK 111 (134)
T ss_dssp EEECTTCEEEEEEEEE
T ss_pred EEECCCCEEEEEEeCC
Confidence 4799999998866543
No 340
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.98 E-value=41 Score=19.50 Aligned_cols=15 Identities=20% Similarity=0.230 Sum_probs=12.2
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 24 eLsf~~Gd~i~v~~~ 38 (85)
T 2dlp_A 24 LLSFHRGDLIKLLPV 38 (85)
T ss_dssp BCCBCTTCEEEECCC
T ss_pred CccCcCCCEEEEEEc
Confidence 456899999999874
No 341
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.98 E-value=43 Score=19.96 Aligned_cols=14 Identities=14% Similarity=0.287 Sum_probs=10.4
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 55 A~~aG~L~~GD~I~~ 69 (108)
T 1q7x_A 55 AESDGRIHKGDRVLA 69 (108)
T ss_dssp HHHHTCCCSSCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 34455 999999874
No 342
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=21.81 E-value=34 Score=20.43 Aligned_cols=15 Identities=20% Similarity=0.034 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+...+ |++||.|+=
T Consensus 56 pA~~aG~l~~GD~I~~ 71 (108)
T 2jre_A 56 AAALDGRIEPNDKILR 71 (108)
T ss_dssp HHHHHSSCCSSEEEEE
T ss_pred HHHHcCCCCCCCEEEE
Confidence 344457 999999874
No 343
>2eve_A Hypothetical protein pspto5229; alpha-beta protein, structural genomics, PSI, protein struct initiative; HET: MPO; 1.60A {Pseudomonas syringae PV} SCOP: b.122.1.8 PDB: 2g2x_A
Probab=21.77 E-value=72 Score=21.67 Aligned_cols=19 Identities=26% Similarity=0.646 Sum_probs=15.7
Q ss_pred HHHHhhcCCCCCCEEEEEEcC
Q 043432 80 RAFIKRYCLELGDYIMVYKDE 100 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~~ 100 (105)
.+|.| ..++||.+.||-..
T Consensus 35 rN~mr--~Mk~GD~~ffYHS~ 53 (157)
T 2eve_A 35 RNFLR--TMAEGDEFFFYHSS 53 (157)
T ss_dssp HHHHH--HCCTTCEEEEEECS
T ss_pred HHHHH--hcCCCCEEEEEecC
Confidence 47777 68999999999864
No 344
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=21.71 E-value=44 Score=20.87 Aligned_cols=15 Identities=27% Similarity=0.178 Sum_probs=10.9
Q ss_pred HHhhcC-CCCCCEEEE
Q 043432 82 FIKRYC-LELGDYIMV 96 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f 96 (105)
-+.+.+ |++||.|+=
T Consensus 55 pA~~aG~L~~GD~Il~ 70 (129)
T 2kpk_A 55 PAALDGKMETGDVIVS 70 (129)
T ss_dssp HHHHHSSCCTTCEEEE
T ss_pred hHHHcCCCCCCCEEEE
Confidence 344456 999999974
No 345
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.70 E-value=46 Score=20.35 Aligned_cols=14 Identities=29% Similarity=0.233 Sum_probs=10.5
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+.+.+ |++||.|+=
T Consensus 60 A~~aG~L~~GD~Il~ 74 (120)
T 2eno_A 60 AALDGRLQEGDKILS 74 (120)
T ss_dssp HHHSCCSCTTCEEEE
T ss_pred HHHCCCCCCCCEEEE
Confidence 34456 999999874
No 346
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=21.61 E-value=29 Score=19.17 Aligned_cols=18 Identities=17% Similarity=0.067 Sum_probs=12.9
Q ss_pred hcCCCCCCEEEEEEcCCC
Q 043432 85 RYCLELGDYIMVYKDELE 102 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~~ 102 (105)
+-.+++||+|.+.....+
T Consensus 23 eLs~~~Gd~i~v~~~~~~ 40 (69)
T 2eqi_A 23 ELTFCRGALIHNVSKEPG 40 (69)
T ss_dssp CCCBCTTCEEESCCCCSS
T ss_pred ccCCCCCCEEEEEEcCCC
Confidence 456789999988765443
No 347
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=21.41 E-value=47 Score=21.54 Aligned_cols=18 Identities=33% Similarity=0.409 Sum_probs=15.3
Q ss_pred HHHHhhcCCCCCCEEEEE
Q 043432 80 RAFIKRYCLELGDYIMVY 97 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~ 97 (105)
..-++..+|+.||.|.-.
T Consensus 83 ~~~irrf~lr~GD~V~g~ 100 (130)
T 1a62_A 83 PSQIRRFNLRTGDTISGK 100 (130)
T ss_dssp HHHHHHTTCCTTCEEEEE
T ss_pred HHHHhHhCCCCCCEEEEE
Confidence 567888899999999774
No 348
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.28 E-value=49 Score=19.73 Aligned_cols=16 Identities=25% Similarity=0.131 Sum_probs=11.4
Q ss_pred HHhhcC-CCCCCEEEEE
Q 043432 82 FIKRYC-LELGDYIMVY 97 (105)
Q Consensus 82 fV~~k~-L~~GD~i~f~ 97 (105)
-+...+ |++||.|+=.
T Consensus 51 ~A~~aG~L~~GD~Il~V 67 (113)
T 1um7_A 51 PADLSGELRRGDRILSV 67 (113)
T ss_dssp HHHHTTCCCTTCEEEEE
T ss_pred HHHHcCCCCCCCEEEEE
Confidence 344456 9999998743
No 349
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=21.15 E-value=52 Score=19.55 Aligned_cols=17 Identities=18% Similarity=0.259 Sum_probs=13.4
Q ss_pred hcCCCCCCEEEEEEcCC
Q 043432 85 RYCLELGDYIMVYKDEL 101 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~~ 101 (105)
+-.|++||+|.+.....
T Consensus 50 eLs~~~Gd~i~v~~~~~ 66 (98)
T 1udl_A 50 ELSFSKGQLINVMNKDD 66 (98)
T ss_dssp SCCCCTTCEEEECBCCS
T ss_pred ccCCcCCCEEEEEEecC
Confidence 56789999999987544
No 350
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.96 E-value=65 Score=19.15 Aligned_cols=15 Identities=27% Similarity=0.410 Sum_probs=12.1
Q ss_pred hhcCCCCCCEEEEEE
Q 043432 84 KRYCLELGDYIMVYK 98 (105)
Q Consensus 84 ~~k~L~~GD~i~f~~ 98 (105)
.+-.+++||+|.+..
T Consensus 40 ~eLsf~~Gd~i~vl~ 54 (97)
T 2csq_A 40 EELPFKEGQIIKVYG 54 (97)
T ss_dssp TBCCBCTTCEEEEEE
T ss_pred CccCCCCCCEEEEEE
Confidence 355689999999984
No 351
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=20.92 E-value=72 Score=18.87 Aligned_cols=16 Identities=25% Similarity=0.434 Sum_probs=13.0
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 45 ELsf~~GD~I~Vl~~~ 60 (89)
T 2rf0_A 45 ELTLRRGDRVQVLSQD 60 (89)
T ss_dssp BCCBCTTCEEEEEECC
T ss_pred ccccCCCCEEEEEecc
Confidence 4568999999998863
No 352
>2glw_A PHS018, 92AA long hypothetical protein; RIFT barrel, bioinformatics, transcription; NMR {Pyrococcus horikoshii}
Probab=20.77 E-value=81 Score=19.16 Aligned_cols=20 Identities=20% Similarity=0.164 Sum_probs=17.2
Q ss_pred HHHHhhcCCCCCCEEEEEEc
Q 043432 80 RAFIKRYCLELGDYIMVYKD 99 (105)
Q Consensus 80 ~~fV~~k~L~~GD~i~f~~~ 99 (105)
.+.-+.-+|++||.+.|..+
T Consensus 66 keiR~~lgi~~Gd~l~~~~~ 85 (92)
T 2glw_A 66 KALRDVIGIKPGEVIEVLLL 85 (92)
T ss_dssp HHHHHHHTCCTTCEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEEe
Confidence 57778889999999999764
No 353
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=20.76 E-value=1.6e+02 Score=19.46 Aligned_cols=54 Identities=20% Similarity=0.283 Sum_probs=31.2
Q ss_pred CCCEEEEEEECCCCeEEEEEEEEcCCCCCcceeecChHHHHhh-cCCCCCCEEEEE
Q 043432 43 KAGFWMHLEDMDFNKVWTFKFRFWPNNRGRMYIFENTRAFIKR-YCLELGDYIMVY 97 (105)
Q Consensus 43 ~~~~~l~~~D~~~g~~W~fr~~~~~~~~s~~y~l~gW~~fV~~-k~L~~GD~i~f~ 97 (105)
.-|.+|.+.| .+|.+-+|++....-.+.....++-=+..-++ -+.++||.|.+-
T Consensus 86 ~~Gs~V~l~~-~~g~~~~y~iVg~~ead~~~~~IS~~SPlg~ALlGk~vGD~v~v~ 140 (158)
T 2p4v_A 86 FFGAWVEIEN-DDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVN 140 (158)
T ss_dssp SSSCEEEEEC-TTCCCEEEEBCCSTTCCSSSCCBCTTSHHHHHSTTCCTTCEEEEE
T ss_pred eccEEEEEEE-CCCCEEEEEEECHHHcCccCCeecCCCHHHHHhcCCCCCCEEEEE
Confidence 3467888888 56766555554322122222233333555555 478899998875
No 354
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=20.75 E-value=39 Score=21.91 Aligned_cols=14 Identities=29% Similarity=0.235 Sum_probs=10.6
Q ss_pred HhhcCCCCCCEEEE
Q 043432 83 IKRYCLELGDYIMV 96 (105)
Q Consensus 83 V~~k~L~~GD~i~f 96 (105)
|....|++||.|.|
T Consensus 85 v~~~~~~pGDlvff 98 (142)
T 3gt2_A 85 ILPQQARKGDLIFY 98 (142)
T ss_dssp ECGGGCCTTCEEEE
T ss_pred echhhCCCCCEEEe
Confidence 34568999999865
No 355
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=20.74 E-value=49 Score=20.81 Aligned_cols=14 Identities=21% Similarity=0.266 Sum_probs=10.5
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+-
T Consensus 78 A~~aG~L~~GD~Il~ 92 (131)
T 1wfg_A 78 ADTVGHLRPGDEVLE 92 (131)
T ss_dssp HHHTSCCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 44456 999999874
No 356
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=20.70 E-value=76 Score=16.89 Aligned_cols=16 Identities=13% Similarity=0.320 Sum_probs=12.6
Q ss_pred hcCCCCCCEEEEEEcC
Q 043432 85 RYCLELGDYIMVYKDE 100 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~~ 100 (105)
+-.+++||+|.+....
T Consensus 22 eLs~~~Gd~i~v~~~~ 37 (62)
T 2iim_A 22 DLGFEKGEQLRILEQS 37 (62)
T ss_dssp BCCBCTTCEEEEEECC
T ss_pred CcCCCCCCEEEEEEcC
Confidence 4568999999998753
No 357
>3idw_A Actin cytoskeleton-regulatory complex protein SLA; clathrin adaptor, endocytosis, SAM domain, yeast, actin-BIND membrane, endosome; 1.85A {Saccharomyces cerevisiae}
Probab=20.62 E-value=7 Score=23.46 Aligned_cols=20 Identities=25% Similarity=0.448 Sum_probs=15.5
Q ss_pred hHHHHhhcCCCCCCEEEEEE
Q 043432 79 TRAFIKRYCLELGDYIMVYK 98 (105)
Q Consensus 79 W~~fV~~k~L~~GD~i~f~~ 98 (105)
-....|+-+|++||+|-+++
T Consensus 40 ~~~~Lr~LGi~eGDIIrVmk 59 (72)
T 3idw_A 40 NNSMLRTLGLREGDIVRVMK 59 (72)
T ss_dssp CHHHHHHTTCCHHHHHHHHH
T ss_pred CHHHHHHcCCchhhHHHHHH
Confidence 36788899999999876543
No 358
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=20.52 E-value=41 Score=20.43 Aligned_cols=14 Identities=29% Similarity=0.361 Sum_probs=10.2
Q ss_pred HhhcC-CCCCCEEEE
Q 043432 83 IKRYC-LELGDYIMV 96 (105)
Q Consensus 83 V~~k~-L~~GD~i~f 96 (105)
+...+ |++||.|+=
T Consensus 63 A~~aG~L~~GD~Il~ 77 (117)
T 2ehr_A 63 AGKTNALKTGDKILE 77 (117)
T ss_dssp TTSSCSCCTTCEEEE
T ss_pred HHHcCCCCCCCEEEE
Confidence 33445 999999864
No 359
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.31 E-value=54 Score=18.48 Aligned_cols=14 Identities=50% Similarity=0.859 Sum_probs=11.3
Q ss_pred hcCCCCCCEEEEEE
Q 043432 85 RYCLELGDYIMVYK 98 (105)
Q Consensus 85 ~k~L~~GD~i~f~~ 98 (105)
+-.+++||+|.+..
T Consensus 30 eLsf~~Gd~i~v~~ 43 (75)
T 2ege_A 30 RLALRAGDVVMVYG 43 (75)
T ss_dssp BCCBCTTCEEEEES
T ss_pred cceECCCCEEEEeE
Confidence 44589999998885
No 360
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=20.26 E-value=38 Score=18.56 Aligned_cols=14 Identities=21% Similarity=0.278 Sum_probs=11.5
Q ss_pred hcCCCCCCEEEEEE
Q 043432 85 RYCLELGDYIMVYK 98 (105)
Q Consensus 85 ~k~L~~GD~i~f~~ 98 (105)
+-.|++||+|.+..
T Consensus 23 eLs~~~Gd~i~v~~ 36 (67)
T 2kxc_A 23 LLSFAQGDVITLLI 36 (67)
T ss_dssp BCCBCTTCEEEESS
T ss_pred CCcCCCCCEEEEeE
Confidence 45689999999876
No 361
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=20.11 E-value=79 Score=17.31 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=12.1
Q ss_pred hcCCCCCCEEEEEEc
Q 043432 85 RYCLELGDYIMVYKD 99 (105)
Q Consensus 85 ~k~L~~GD~i~f~~~ 99 (105)
+-.+++||+|.+...
T Consensus 24 eLs~~~Gd~i~v~~~ 38 (68)
T 2k2m_A 24 ELSVKQRDVLEVLDD 38 (68)
T ss_dssp BCCBCTTCEEEEEEC
T ss_pred cccCCCCCEEEEEEc
Confidence 456899999999875
Done!