Query 043437
Match_columns 426
No_of_seqs 210 out of 1766
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 08:14:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043437.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043437hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 1.7E-60 5.9E-65 464.9 30.7 302 78-423 48-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 3E-60 1E-64 464.0 25.0 301 79-423 54-383 (383)
3 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-58 4.1E-63 445.2 30.5 305 76-423 5-324 (325)
4 3vla_A EDGP; extracellular, in 100.0 2.5E-59 8.4E-64 462.4 26.2 325 83-423 17-399 (413)
5 1tzs_A Cathepsin E; hydrolase, 100.0 3.1E-58 1E-62 447.0 30.2 303 82-425 19-344 (351)
6 1j71_A Candidapepsin, aspartic 100.0 4.2E-58 1.4E-62 443.2 27.8 301 77-426 3-327 (334)
7 1dpj_A Proteinase A; proteinas 100.0 5.4E-58 1.8E-62 441.7 28.3 301 80-423 7-329 (329)
8 4aa9_A Chymosin; hydrolase, as 100.0 2E-58 6.9E-63 443.1 25.0 300 79-423 4-320 (320)
9 3cms_A Chymosin B; hydrolase, 100.0 4.4E-58 1.5E-62 441.0 26.8 298 79-423 7-323 (323)
10 2qzx_A Candidapepsin-5; aspart 100.0 6.3E-58 2.1E-62 443.5 27.8 303 77-426 3-334 (342)
11 1am5_A Pepsin, acid proteinase 100.0 1.1E-57 3.6E-62 438.7 28.2 298 81-423 7-324 (324)
12 1mpp_A Pepsin; hydrolase(acid 100.0 2.2E-57 7.5E-62 443.0 29.2 306 81-426 13-358 (361)
13 3fv3_A SAPP1P-secreted asparti 100.0 3.5E-57 1.2E-61 438.0 30.1 302 77-426 3-332 (339)
14 3c9x_A Trichoderma reesei aspa 100.0 1.3E-57 4.5E-62 438.7 26.4 301 81-422 10-329 (329)
15 1htr_B Gastricsin; aspartyl pr 100.0 1.5E-57 5.3E-62 438.5 25.6 300 83-423 9-329 (329)
16 1miq_A Plasmepsin; aspartic pr 100.0 3.7E-57 1.3E-61 442.2 28.0 294 82-423 58-374 (375)
17 1qdm_A Prophytepsin; aspartic 100.0 7.7E-57 2.6E-61 451.5 30.9 308 79-423 45-478 (478)
18 3aup_A SBG7S, BG, basic 7S glo 100.0 3.9E-57 1.3E-61 447.1 28.2 327 82-425 17-395 (403)
19 1oew_A Endothiapepsin; hydrola 100.0 4E-57 1.4E-61 435.3 26.0 300 81-422 10-329 (329)
20 3pvk_A Candidapepsin-2; hydrol 100.0 1.1E-56 3.7E-61 435.2 27.0 302 77-426 3-334 (342)
21 3k1w_A Renin; protease, altern 100.0 5.4E-57 1.9E-61 437.1 24.5 301 79-423 11-340 (341)
22 2bju_A Plasmepsin II; aspartic 100.0 1.5E-56 5.3E-61 444.8 26.3 295 81-423 133-450 (453)
23 3qvc_A Histo-aspartic protease 100.0 1.1E-55 3.6E-60 439.4 27.7 296 78-423 129-449 (451)
24 1ibq_A Aspergillopepsin; aspar 100.0 1.4E-55 4.8E-60 423.9 27.1 301 78-423 6-325 (325)
25 1yg9_A Aspartic protease BLA G 100.0 9.4E-56 3.2E-60 425.8 25.5 297 80-423 11-329 (330)
26 1izd_A Aspartic proteinase; su 100.0 1.3E-55 4.4E-60 423.6 25.8 301 77-423 6-323 (323)
27 1bxo_A Protein (penicillopepsi 100.0 2.2E-55 7.4E-60 422.2 23.3 300 77-423 6-323 (323)
28 2ewy_A Beta-secretase 2; BACE2 100.0 4.6E-54 1.6E-58 422.9 30.9 311 79-425 6-357 (383)
29 3lpj_A Beta-secretase 1; alzhe 100.0 7.5E-54 2.6E-58 429.9 30.2 308 83-426 71-423 (455)
30 2qp8_A Beta-secretase 1; BACE1 100.0 1.2E-53 4.2E-58 421.3 27.4 308 82-426 17-370 (395)
31 3vf3_A Beta-secretase 1; struc 100.0 3.3E-53 1.1E-57 419.3 29.8 308 84-426 26-377 (402)
32 1wkr_A Polyporopepsin; hydrola 100.0 6E-53 2E-57 408.3 28.0 296 79-426 5-336 (340)
33 1t6e_X Xylanase inhibitor; two 100.0 5.8E-53 2E-57 414.2 26.0 315 82-423 10-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 2.3E-43 8E-48 323.6 18.5 221 78-331 5-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.8E-37 9.4E-42 284.1 20.6 217 193-423 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 7.2E-24 2.5E-28 164.7 9.3 87 79-187 6-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 2.3E-17 7.8E-22 125.8 7.6 77 343-423 3-87 (87)
38 2i1a_A DNA damage-inducible pr 94.0 0.12 4E-06 42.4 6.6 100 289-420 31-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 92.4 0.13 4.5E-06 42.1 4.5 102 289-421 29-134 (148)
40 2hs1_A HIV-1 protease; ultra-h 88.4 0.57 1.9E-05 35.3 4.5 28 89-118 10-37 (99)
41 1fmb_A EIAV protease; hydrolas 87.9 0.52 1.8E-05 35.9 4.0 27 88-116 9-35 (104)
42 3ec0_A Protease; HIV-2, inhibi 86.3 0.9 3.1E-05 34.1 4.5 27 89-117 10-36 (99)
43 3liy_A Protease; hydrolase, hy 83.8 0.99 3.4E-05 34.6 3.7 31 89-119 12-45 (116)
44 2i1a_A DNA damage-inducible pr 82.8 1.2 4E-05 36.2 4.2 32 84-117 23-54 (148)
45 2hah_A Protease, retropepsin; 81.9 1.3 4.4E-05 34.4 3.8 27 88-117 15-41 (116)
46 3sqf_A Protease; folded monome 77.5 2.4 8.3E-05 32.6 4.0 28 89-118 11-38 (114)
47 3s8i_A Protein DDI1 homolog 1; 76.5 2.2 7.5E-05 34.7 3.8 31 85-117 22-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 70.0 5.4 0.00019 31.6 4.5 29 87-117 22-50 (132)
49 2rsp_A RSV protease; hydrolase 65.7 6.5 0.00022 30.7 4.1 23 94-118 27-49 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 63.9 6 0.0002 33.8 3.9 27 88-116 9-35 (203)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 43.2 21 0.00071 30.5 3.9 28 88-117 113-140 (203)
52 1lya_A Cathepsin D; lysosomal 37.0 25 0.00086 25.9 3.1 33 279-320 12-44 (97)
53 3c9x_A Trichoderma reesei aspa 32.1 39 0.0013 30.9 4.3 35 84-118 191-231 (329)
54 1bxo_A Protein (penicillopepsi 28.8 42 0.0015 30.6 3.9 35 84-118 187-225 (323)
55 1oew_A Endothiapepsin; hydrola 27.1 47 0.0016 30.4 3.8 35 84-118 190-230 (329)
56 1b5f_A Protein (cardosin A); h 26.0 60 0.002 28.1 4.1 33 85-117 187-227 (239)
57 2apr_A Rhizopuspepsin; hydrola 25.9 48 0.0016 30.3 3.6 34 84-117 191-229 (325)
58 1izd_A Aspartic proteinase; su 24.3 55 0.0019 29.8 3.7 35 84-118 187-226 (323)
59 1ibq_A Aspergillopepsin; aspar 22.7 78 0.0027 28.8 4.4 33 279-322 13-45 (325)
60 1lya_B Cathepsin D; lysosomal 20.5 79 0.0027 27.2 3.8 34 85-118 98-138 (241)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.7e-60 Score=464.94 Aligned_cols=302 Identities=28% Similarity=0.440 Sum_probs=256.4
Q ss_pred cceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCC
Q 043437 78 QADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCS 157 (426)
Q Consensus 78 ~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 157 (426)
.++.++.+.+|+++|+||||||+|.|+|||||+++||+|..|..|.+..++.|||++|+||+..+
T Consensus 48 ~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~--------------- 112 (370)
T 3psg_A 48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS--------------- 112 (370)
T ss_dssp CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE---------------
T ss_pred ecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC---------------
Confidence 44556789999999999999999999999999999999999997777889999999999999987
Q ss_pred CCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc---------
Q 043437 158 TEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS--------- 226 (426)
Q Consensus 158 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s--------- 226 (426)
+.|.+.|++|+. .|.+++|+|+||+. .++++.||++....+ .| ....+||||||++..+
T Consensus 113 ----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~ 182 (370)
T 3psg_A 113 ----QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFD 182 (370)
T ss_dssp ----EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHH
T ss_pred ----cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHHH
Confidence 899999999985 59999999999997 999999999998876 34 6778999999998765
Q ss_pred -hhhhcccccCCeeEEeecCCCCCCCcceEEeCC--CCccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCC
Q 043437 227 -LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGS--NGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASE 303 (426)
Q Consensus 227 -l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg--~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 303 (426)
+++| +.+.+++||+||.+... ..|.|+||| ..++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. ...
T Consensus 183 ~l~~q-g~i~~~~FS~~L~~~~~--~~G~l~fGg~D~~~y~g~-l~~~pv~~---~~~w~v~l~~i~v~g~~~~~--~~~ 253 (370)
T 3psg_A 183 NLWDQ-GLVSQDLFSVYLSSNDD--SGSVVLLGGIDSSYYTGS-LNWVPVSV---EGYWQITLDSITMDGETIAC--SGG 253 (370)
T ss_dssp HHHHT-TCSSSSEEEEEEC-------CEEEEETCCCGGGBSSC-CEEEECSE---ETTEEEEECEEESSSSEEEC--TTC
T ss_pred HHHHC-CCCCCCEEEEEEccCCC--CCeEEEEEeeChHhcCCc-ceeecccc---cceeEEEEeEEEECCEEEec--CCC
Confidence 3444 66789999999987532 489999999 3455555 99999987 67999999999999987764 457
Q ss_pred CcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCC
Q 043437 304 GNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDT 383 (426)
Q Consensus 304 ~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~ 383 (426)
..+|+||||+++++|++++++|.+++.+... ..+.+.++ |+... .+|+|+|+|+|++++||+++|+++ .+
T Consensus 254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~----~~g~~~v~-C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~-~~- 323 (370)
T 3psg_A 254 CQAIVDTGTSLLTGPTSAIANIQSDIGASEN----SDGEMVIS-CSSID---SLPDIVFTIDGVQYPLSPSAYILQ-DD- 323 (370)
T ss_dssp EEEEECTTCCSEEEEHHHHHHHHHHTTCEEC----TTCCEECC-GGGGG---GCCCEEEEETTEEEEECHHHHEEE-CS-
T ss_pred ceEEEcCCCCcEECCHHHHHHHHHHhCCccc----CCCcEEEE-CCCcc---cCCcEEEEECCEEEEECHHHhccc-CC-
Confidence 8999999999999999999999998876532 23445454 98653 689999999999999999999998 33
Q ss_pred eEEEE-EEcCC------CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 384 SVCFT-FKGME------GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 384 ~~C~~-i~~~~------~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
..|++ |.+.+ ..||||++|||++|+|||++++|||||+++
T Consensus 324 ~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 324 DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 46987 76532 359999999999999999999999999985
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3e-60 Score=464.04 Aligned_cols=301 Identities=21% Similarity=0.351 Sum_probs=255.7
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC----CcccCCCCCCCCCCCCccccccCCCcccCCcCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT----ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERT 154 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~----~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 154 (426)
++.+..+.+|+++|+||||||+|.|+|||||+++||+|..|. .| ..++.|||++|+||+..+
T Consensus 54 ~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C--~~~~~y~~~~SsT~~~~~------------ 119 (383)
T 2x0b_A 54 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG------------ 119 (383)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred eeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccc--cCCCCCCCCCCCcEEECC------------
Confidence 344568899999999999999999999999999999999996 58 467899999999999987
Q ss_pred CCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc------
Q 043437 155 SCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS------ 226 (426)
Q Consensus 155 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------ 226 (426)
|.|.+.|++|+.. |++++|+|+||+. .++ |.|||++...+ .| ....+||||||++.++
T Consensus 120 -------~~~~i~Yg~Gs~~-G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 120 -------TELTLRYSTGTVS-GFLSQDIITVGGI-----TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp -------EEEEEECSSCEEE-EEEEEEEEEETTE-----EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------cEEEEEcCCccEE-EEEEeeEEEEcCc-----eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCc
Confidence 9999999999855 9999999999987 899 99999998866 34 5788999999998775
Q ss_pred ----hhhhcccccCCeeEEeecCCCCCC--CcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeee
Q 043437 227 ----LVTQMGSSIGGKFSYCLVPFLSSE--SSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHF 298 (426)
Q Consensus 227 ----l~~ql~~~~~~~Fs~~l~~~~~~~--~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 298 (426)
+++| +.+.+++||+||.+..... ..|+|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+..
T Consensus 186 ~~~~l~~q-g~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~-l~~~pv~~---~~~w~v~l~~i~v~~~~~~~ 260 (383)
T 2x0b_A 186 IFDNIISQ-GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN-FHYINLIK---TGVWQIQMKGVSVGSSTLLC 260 (383)
T ss_dssp HHHHHHTT-TCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEE-EEEEEBSS---TTSCEEEECEEEESSCCCBS
T ss_pred HHHHHHhC-CCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCc-eEEEEcCC---CceEEEEEeEEEeCCceEEc
Confidence 3455 6678899999998753320 27999999943 44454 99999986 67999999999999987532
Q ss_pred cCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEE
Q 043437 299 DDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFI 378 (426)
Q Consensus 299 ~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~ 378 (426)
..+..+|+||||+++++|++++++|.+++.+.. ..+.+.++ |+... .+|+|+|+|+|++++|++++|++
T Consensus 261 --~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v~-C~~~~---~~P~i~f~~~g~~~~l~~~~yi~ 329 (383)
T 2x0b_A 261 --EDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVVK-CNEGP---TLPDISFHLGGKEYTLTSADYVF 329 (383)
T ss_dssp --TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEEE-GGGTT---TCCCEEEEETTEEEEECHHHHBC
T ss_pred --CCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEEe-ccccc---cCceEEEEECCEEEEECHHHhEe
Confidence 457799999999999999999999999987653 24455555 99764 68999999999999999999998
Q ss_pred EcCC--CeEEEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 379 RTSD--TSVCFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 379 ~~~~--~~~C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+... +..|++ |.+. ++.||||+.|||++|+|||++++|||||+++
T Consensus 330 ~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 330 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 8653 458985 8753 3589999999999999999999999999974
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-58 Score=445.16 Aligned_cols=305 Identities=25% Similarity=0.373 Sum_probs=258.2
Q ss_pred CccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCC
Q 043437 76 TAQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTS 155 (426)
Q Consensus 76 ~~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~ 155 (426)
.+.+.....+.+|+++|+||||+|++.|+|||||+++||+|..|..| ++.++.|||++|+||+...
T Consensus 5 ~v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~~~~~y~~~~SsT~~~~~------------- 70 (325)
T 2apr_A 5 TVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GSGQTKYDPNQSSTYQADG------------- 70 (325)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CTTSCCBCGGGCTTCEEEE-------------
T ss_pred ceeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hcCCCCCCcccCCCeeeCC-------------
Confidence 45556678899999999999999999999999999999999999999 7889999999999999876
Q ss_pred CCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC-CCCCceeEeeCCCCCc-------h
Q 043437 156 CSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF-NENATGIVGLGGGSVS-------L 227 (426)
Q Consensus 156 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s-------l 227 (426)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++.....| ....+||||||++..+ +
T Consensus 71 ------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~ 139 (325)
T 2apr_A 71 ------RTWSISYGDGSSASGILAKDNVNLGGL-----LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTP 139 (325)
T ss_dssp ------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCH
T ss_pred ------CEEEEEECCCCCEEEEEEEEEEEECCE-----EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCH
Confidence 899999999997779999999999987 99999999999876655 4569999999997654 3
Q ss_pred hhhc---ccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCC
Q 043437 228 VTQM---GSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDAS 302 (426)
Q Consensus 228 ~~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 302 (426)
++|| +.+.+++||+||.+.... ..|.|+|||. +++.++ +.|+|+... ..+|.|.+++|+||+ .+. ..
T Consensus 140 ~~~l~~qg~i~~~~FS~~l~~~~~~-~~G~l~fGg~d~~~~~g~-l~~~p~~~~--~~~~~v~l~~i~vg~-~~~---~~ 211 (325)
T 2apr_A 140 MDNLISQGLISRPIFGVYLGKAKNG-GGGEYIFGGYDSTKFKGS-LTTVPIDNS--RGWWGITVDRATVGT-STV---AS 211 (325)
T ss_dssp HHHHHHTTSCSSSEEEEEECCGGGT-CCEEEEETCCCGGGBCSC-CEEEECBCT--TSSCEEEECEEEETT-EEE---EC
T ss_pred HHHHHhcCCCCCceEEEEecCCCCC-CCCEEEEccCCchhccCc-eEEEEccCC--CCEEEEEEeEEEECC-Eec---CC
Confidence 3333 446789999999764333 5899999994 355555 999999753 679999999999999 333 34
Q ss_pred CCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC
Q 043437 303 EGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD 382 (426)
Q Consensus 303 ~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~ 382 (426)
...+||||||+++++|+++++++++++.+.+... +.+.+ +|+.. .+|+|+|+|+|.+++||+++|+++..
T Consensus 212 ~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~-~C~~~----~~p~i~f~f~g~~~~ip~~~~~~~~~- 281 (325)
T 2apr_A 212 SFDGILDTGTTLLILPNNIAASVARAYGASDNGD----GTYTI-SCDTS----AFKPLVFSINGASFQVSPDSLVFEEF- 281 (325)
T ss_dssp CEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEE-CSCGG----GCCCEEEEETTEEEEECGGGGEEEEE-
T ss_pred CceEEEecCCccEECCHHHHHHHHHHHhcccCCC----CeEEE-ECCCC----CCCcEEEEECCEEEEECHHHEEEcCC-
Confidence 6799999999999999999999999998765432 33444 49842 48999999998899999999988755
Q ss_pred CeEEEE-EEcC-CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 383 TSVCFT-FKGM-EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 383 ~~~C~~-i~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+..|++ |... ++.||||+.|||++|+|||++++|||||+++
T Consensus 282 ~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 282 QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 568998 6654 4789999999999999999999999999975
No 4
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=2.5e-59 Score=462.38 Aligned_cols=325 Identities=24% Similarity=0.393 Sum_probs=265.6
Q ss_pred cCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCC-----
Q 043437 83 SALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCS----- 157 (426)
Q Consensus 83 ~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~----- 157 (426)
..+++|+++|.||||||+|.|+|||||+++||+|.+| .+|+||+.+.|.++.|.......|.
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~ 83 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGSIACGDCFNG 83 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTCCEEECCSSC
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccccCCCcccccC
Confidence 4578999999999999999999999999999998865 4899999999999999876644331
Q ss_pred -----CCCCceeeeEe-CCCCeeeeeEEEEEEEecCCCCC----CceeceeeeeeeEecCC-CCCCCCceeEeeCCCCCc
Q 043437 158 -----TEETCEYSATY-GDRSFSNGNLAVETVTLGSTNGR----PAALRNIIFGCGHNDDG-TFNENATGIVGLGGGSVS 226 (426)
Q Consensus 158 -----~~~~~~~~~~Y-~~g~~~~G~~~~D~v~ig~~~~~----~~~~~~~~fg~~~~~~~-~~~~~~~GilGLg~~~~s 226 (426)
..+.|.|.+.| ++++.+.|++++|+|+|+..++. .+.++++.|||+..+.. .+....+||||||++.+|
T Consensus 84 ~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lS 163 (413)
T 3vla_A 84 PRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIA 163 (413)
T ss_dssp CBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSS
T ss_pred CCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcc
Confidence 13569999999 48777779999999999854432 35889999999998632 223678999999999999
Q ss_pred hhhhcccc--cCCeeEEeecCCCCCCCcceEEeCCCCc-------cCCCceEEeecccCCC-----------CceEEEEE
Q 043437 227 LVTQMGSS--IGGKFSYCLVPFLSSESSSKINFGSNGV-------VSGTGVVTTPLVAKDP-----------DTFYFLTL 286 (426)
Q Consensus 227 l~~ql~~~--~~~~Fs~~l~~~~~~~~~G~l~~Gg~~~-------~~~~~~~~~p~~~~~~-----------~~~w~v~l 286 (426)
++.|+... ..++||+||.+.. . ..|.|+|||.+. +.++++.|+||+.++. ..+|.|+|
T Consensus 164 l~sql~~~~~i~~~FS~cL~~~~-~-~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l 241 (413)
T 3vla_A 164 LPSQFASAFSFKRKFAMCLSGST-S-SNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241 (413)
T ss_dssp HHHHHHHHHTCCSEEEEECCSCS-S-SCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECC
T ss_pred hHHHHhhhcCCCceEEEeCCCCC-C-CceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEE
Confidence 99998642 2699999998742 2 589999999543 3344499999998642 27999999
Q ss_pred EEEEEcceeeeecC-------CCCCcEEEccCCccccCcHHHHHHHHHHHHhhcc---CCCCCCCCCCccccccCCCC--
Q 043437 287 ESISVGKKKIHFDD-------ASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIK---ADPISDPEGVLDLCYPYSSD-- 354 (426)
Q Consensus 287 ~~i~v~~~~~~~~~-------~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~C~~~~~~-- 354 (426)
++|+||++.+..+. .+.+++||||||++++||+++|++|.++|.+++. ..+. .+...++.|+.....
T Consensus 242 ~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~-~~~~~~~~C~~~~~~~~ 320 (413)
T 3vla_A 242 KSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV-ASVAPFGACFSTDNILS 320 (413)
T ss_dssp CEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-CCCTTCSCEEECTTCCE
T ss_pred EEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-CCCCCCcceeccCCccc
Confidence 99999999887642 1457899999999999999999999999998764 1222 233345679987532
Q ss_pred ----CCCCeEEEEEcc--ceEEeCCCceEEEcCCCeEEEEEEcCC----CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 355 ----FKAPQITVHFSG--ADVVLSPENTFIRTSDTSVCFTFKGME----GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 355 ----~~~P~l~f~f~g--~~~~l~~~~~~~~~~~~~~C~~i~~~~----~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
..+|+|+|+|+| ++|+|++++|+++..++..|++|...+ ..||||+.|||++|+|||++++|||||++.
T Consensus 321 ~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 321 TRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp ETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred cccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 268999999998 899999999999877678899977543 579999999999999999999999999853
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.1e-58 Score=447.00 Aligned_cols=303 Identities=26% Similarity=0.403 Sum_probs=252.2
Q ss_pred ecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCCC
Q 043437 82 ISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEET 161 (426)
Q Consensus 82 ~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 161 (426)
+..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.+..++.|||++|+||+...
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------------- 79 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPG------------------- 79 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCS-------------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECC-------------------
Confidence 4578899999999999999999999999999999999983222678999999999999876
Q ss_pred ceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc----------hhh
Q 043437 162 CEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS----------LVT 229 (426)
Q Consensus 162 ~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s----------l~~ 229 (426)
|.|.+.|++|+. .|.+++|+|+||+. .++++.|||+....+ .| ....+||||||++..+ |++
T Consensus 80 ~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 153 (351)
T 1tzs_A 80 QSFSIQYGTGSL-SGIIGADQVSVEGL-----TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMA 153 (351)
T ss_dssp CEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHH
T ss_pred CEEEEEeCCCCe-EEEEEEeEEEECCe-----EECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHH
Confidence 899999999985 59999999999987 999999999998765 34 5678999999998765 334
Q ss_pred hcccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCCcEE
Q 043437 230 QMGSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNII 307 (426)
Q Consensus 230 ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~i 307 (426)
| +.+.+++||+||.+.......|.|+|||. +++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. .....+|
T Consensus 154 q-g~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~--~~~~~ai 226 (351)
T 1tzs_A 154 Q-NLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGS-LNWVPVTK---QAYWQIALDNIQVGGTVMFC--SEGCQAI 226 (351)
T ss_dssp T-TCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSC-CEEEECSE---ETTEEEEEEEEEETTEEEEC--TTCEEEE
T ss_pred C-CCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCc-eEEEecCC---CceEEEEeCEEEECCceEEc--CCCceEE
Confidence 4 56788999999987532113799999994 345555 99999986 67999999999999987643 4577899
Q ss_pred EccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC--CeE
Q 043437 308 IDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD--TSV 385 (426)
Q Consensus 308 iDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~--~~~ 385 (426)
|||||+++++|++++++|.+++.+... .+.+.+ +|+... .+|+|+|+|+|++++|++++|+++... +..
T Consensus 227 iDSGTs~~~lP~~~~~~l~~~~~~~~~-----~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~ 297 (351)
T 1tzs_A 227 VDTGTSLITGPSDKIKQLQNAIGAAPV-----DGEYAV-ECANLN---VMPDVTFTINGVPYTLSPTAYTLLDFVDGMQF 297 (351)
T ss_dssp ECTTCSSEEECHHHHHHHHHHHTCEEC-----SSSEEE-CGGGGG---GSCCEEEEETTEEEEECTTTSEECC-----CC
T ss_pred eccCCcceeCCHHHHHHHHHHhCCccc-----CCeEEE-eCCCCc---cCCcEEEEECCEEEEECHHHhEeeccCCCCCe
Confidence 999999999999999999999866532 133434 498653 689999999999999999999987653 357
Q ss_pred EEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCCCC
Q 043437 386 CFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCS 425 (426)
Q Consensus 386 C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~ 425 (426)
|++ |.+. ++.||||+.|||++|+|||++++|||||+++|.
T Consensus 298 C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~ 344 (351)
T 1tzs_A 298 CSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPW 344 (351)
T ss_dssp EEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC--
T ss_pred EEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCcc
Confidence 986 8753 367999999999999999999999999999985
No 6
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=4.2e-58 Score=443.20 Aligned_cols=301 Identities=23% Similarity=0.388 Sum_probs=254.5
Q ss_pred ccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCC--CCCCc-------ccCCCCCCCCCCCCccccccCCCcc
Q 043437 77 AQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCK--PCTEC-------YKQAAPFFDPEQSSTYKDLSCDSRQ 147 (426)
Q Consensus 77 ~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~--~C~~C-------~~~~~~~y~~~~SsT~~~~~c~~~~ 147 (426)
+..++.+.+.+|+++|.||||+|++.|+|||||+++||+|. +|..| .+..++.|||++|+|++..+
T Consensus 3 ~~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----- 77 (334)
T 1j71_A 3 VPTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN----- 77 (334)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-----
T ss_pred eeEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-----
Confidence 45567777899999999999999999999999999999976 67643 23578899999999999987
Q ss_pred cCCcCCCCCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCCCCCCceeEeeCCCCC--
Q 043437 148 CTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSV-- 225 (426)
Q Consensus 148 C~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 225 (426)
|.|.+.|++|+.+.|.+++|+|+||+. +++++.|||++... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (334)
T 1j71_A 78 --------------QDFSIEYGDLTSSQGSFYKDTVGFGGI-----SIKNQQFADVTTTS-----VDQGIMGIGFTADEA 133 (334)
T ss_dssp --------------EEEEEEBTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGSS
T ss_pred --------------CceEEEECCCCEEEEEEEEEEEEECCE-----EEccEEEEEEEecC-----CCccEEEEcCCcccC
Confidence 899999999997779999999999987 99999999999863 5789999999764
Q ss_pred ------chhhhc---ccccCCeeEEeecCCCCCCCcceEEeCC--CCccCCCceEEeecccCCCCceEEEEEEEEEEcce
Q 043437 226 ------SLVTQM---GSSIGGKFSYCLVPFLSSESSSKINFGS--NGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKK 294 (426)
Q Consensus 226 ------sl~~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg--~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~ 294 (426)
+++.|| +.+.+++||+||.+... ..|.|+||| .+++.++ +.|+|+.. ..+|.|.+++|+|+++
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~--~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~g~ 207 (334)
T 1j71_A 134 GYNLYDNVPVTLKKQGIINKNAYSLYLNSEDA--STGKIIFGGVDNAKYTGT-LTALPVTS---SVELRVHLGSINFDGT 207 (334)
T ss_dssp TTCCCCCHHHHHHHTTSCSSSEEEEECCCTTC--SEEEEEETEEETTSEEEE-EEEEECCC---SSSCEEEEEEEEETTE
T ss_pred ccccCCcHHHHHHHCCCCCccEEEEEeCCCCC--CCeEEEEeeechHHccCc-eEEEEccC---CCeEEEEEeEEEECCE
Confidence 333333 55678999999987532 589999999 4556555 99999986 5699999999999999
Q ss_pred eeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEE-ccceEEeCC
Q 043437 295 KIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHF-SGADVVLSP 373 (426)
Q Consensus 295 ~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f-~g~~~~l~~ 373 (426)
.+.. ...+||||||+++++|++++++|++++.+.... ....+.+.+|+ .+|+|+|+| +|++++||+
T Consensus 208 ~~~~----~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~C~------~~p~i~f~f~~g~~~~i~~ 274 (334)
T 1j71_A 208 SVST----NADVVLDSGTTITYFSQSTADKFARIVGATWDS---RNEIYRLPSCD------LSGDAVFNFDQGVKITVPL 274 (334)
T ss_dssp EEEE----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET---TTTEEECSSSC------CCSEEEEEESTTCEEEEEG
T ss_pred eccC----CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC---CCceEEEEcCC------CCCceEEEEcCCcEEEECH
Confidence 8875 578999999999999999999999999877631 12233314598 479999999 589999999
Q ss_pred CceEEEcCCCeEEEE-EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 374 ENTFIRTSDTSVCFT-FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 374 ~~~~~~~~~~~~C~~-i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
++|+++..++..|++ |.+. +.||||+.|||++|+|||++++|||||+++|++
T Consensus 275 ~~y~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 275 SELILKDSDSSICYFGISRN-DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp GGGEEECSSSSCEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred HHheeecCCCCeeEEEEeEC-CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 999998765556987 7665 579999999999999999999999999999974
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=5.4e-58 Score=441.69 Aligned_cols=301 Identities=23% Similarity=0.404 Sum_probs=253.1
Q ss_pred eeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCC
Q 043437 80 DIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTE 159 (426)
Q Consensus 80 ~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~ 159 (426)
+.+..+.+|+++|+||||+|++.|+|||||+++||+|..|..|.+..++.|||++|+||+..+
T Consensus 7 l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~----------------- 69 (329)
T 1dpj_A 7 LTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANG----------------- 69 (329)
T ss_dssp CEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-----------------
T ss_pred eeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECC-----------------
Confidence 345678899999999999999999999999999999999997433667899999999999876
Q ss_pred CCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCch----------
Q 043437 160 ETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVSL---------- 227 (426)
Q Consensus 160 ~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~sl---------- 227 (426)
|.|.+.|++|+. .|.+++|+|+||+. .++++.|||++...+ .| ....+||||||++..++
T Consensus 70 --~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l 141 (329)
T 1dpj_A 70 --TEFAIQYGTGSL-EGYISQDTLSIGDL-----TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNA 141 (329)
T ss_dssp --EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHH
T ss_pred --cEEEEEECCceE-EEEEEEEEEEECCe-----EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHH
Confidence 999999999964 59999999999987 999999999998765 34 56789999999987653
Q ss_pred hhhcccccCCeeEEeecCCCCC-CCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCC
Q 043437 228 VTQMGSSIGGKFSYCLVPFLSS-ESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEG 304 (426)
Q Consensus 228 ~~ql~~~~~~~Fs~~l~~~~~~-~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 304 (426)
++| +.+..++||+||.+.... ...|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. ...
T Consensus 142 ~~q-g~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~---~~~ 213 (329)
T 1dpj_A 142 IQQ-DLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGD-ITWLPVRR---KAYWEVKFEGIGLGDEYAEL---ESH 213 (329)
T ss_dssp HHT-TCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEE-EEEEECSS---BTTBEEEEEEEEETTEEEEC---SSC
T ss_pred Hhc-CCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCc-eEEEEcCC---CceEEEEeeeEEECCeEecC---CCc
Confidence 344 557789999999875321 147999999944 44444 99999986 67999999999999988763 478
Q ss_pred cEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCCe
Q 043437 305 NIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTS 384 (426)
Q Consensus 305 ~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~~ 384 (426)
.+||||||+++++|++++++|.+++.+.. ...+.+.++ |+... .+|+|+|+|+|++++|++++|+++.. .
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~~~g~~~~~-C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~--~ 283 (329)
T 1dpj_A 214 GAAIDTGTSLITLPSGLAEMINAEIGAKK----GWTGQYTLD-CNTRD---NLPDLIFNFNGYNFTIGPYDYTLEVS--G 283 (329)
T ss_dssp EEEECTTCSCEEECHHHHHHHHHHHTCEE----CTTSSEEEC-GGGGG---GCCCEEEEETTEEEEECTTTSEEEET--T
T ss_pred cEEeeCCCCcEECCHHHHHHHHHHhCCcc----CCCCeEEEE-CCCCC---cCCcEEEEECCEEEEECHHHhEecCC--C
Confidence 99999999999999999999999986541 113344444 98643 68999999999999999999999875 4
Q ss_pred EEEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 385 VCFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 385 ~C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
.|++ |.+. ++.||||++|||++|+|||++++|||||+++
T Consensus 284 ~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 284 SCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp EEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 7986 7754 2579999999999999999999999999975
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2e-58 Score=443.15 Aligned_cols=300 Identities=23% Similarity=0.362 Sum_probs=253.6
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCST 158 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~ 158 (426)
++.+..+.+|+++|+||||+|++.|++||||+++||+|..|..|.+..++.|||++|+|++..+
T Consensus 4 ~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~---------------- 67 (320)
T 4aa9_A 4 PLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLG---------------- 67 (320)
T ss_dssp ----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE----------------
T ss_pred cceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCC----------------
Confidence 3445678999999999999999999999999999999999996555778999999999999987
Q ss_pred CCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc----------
Q 043437 159 EETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS---------- 226 (426)
Q Consensus 159 ~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s---------- 226 (426)
|.|.+.|++|+. .|.+++|+|+||+. .++++.|||++...+ .| ....+||||||++..+
T Consensus 68 ---~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 138 (320)
T 4aa9_A 68 ---KPLSIHYGTGSM-EGFLGYDTVTVSNI-----VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDN 138 (320)
T ss_dssp ---EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHH
T ss_pred ---cEEEEEECCcEE-EEEEEEEEEEECCE-----eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHH
Confidence 899999999985 59999999999997 999999999998876 34 5678999999987654
Q ss_pred hhhhcccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCC
Q 043437 227 LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEG 304 (426)
Q Consensus 227 l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 304 (426)
+.+| +.+.+++||+||.+. . ..|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. ....
T Consensus 139 l~~~-g~i~~~~Fs~~l~~~--~-~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~w~v~l~~i~v~~~~~~~--~~~~ 208 (320)
T 4aa9_A 139 MMDR-HLVARDLFSVYMDRN--G-QGSMLTLGAIDPSYYTGS-LHWVPVTL---QQYWQFTVDSVTINGVAVAC--VGGC 208 (320)
T ss_dssp HHHT-TCSSSSEEEEECCSS--S-SCCEEEETCCCGGGEEEE-EEEEECSS---BTTBEEEECEEEETTEEEES--TTCE
T ss_pred HHhC-CCCCCceEEEEeCCC--C-CCeEEEEcccCHHHccCc-eEEEEccc---CCceEEEEeEEEECCEEecc--CCCc
Confidence 3344 567899999999875 2 57999999943 44444 99999985 67999999999999988764 4567
Q ss_pred cEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCCe
Q 043437 305 NIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTS 384 (426)
Q Consensus 305 ~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~~ 384 (426)
.++|||||+++++|++++++|.+++..... ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+.+. +.
T Consensus 209 ~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~g~~~~-~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~--~~ 278 (320)
T 4aa9_A 209 QAILDTGTSVLFGPSSDILKIQMAIGATEN----RYGEFDV-NCGNLR---SMPTVVFEINGRDYPLSPSAYTSKD--QG 278 (320)
T ss_dssp EEEECTTCSSEEEEHHHHHHHHHHTTCEEC----TTSCEEE-CGGGGG---GCCCEEEEETTEEEEECHHHHEEEE--TT
T ss_pred EEEEECCCCcEECCHHHHHHHHHHhCCccc----CCCcEEE-eCCCCC---cCceEEEEECCEEEEECHHHhccCC--CC
Confidence 999999999999999999999998865432 1344444 498653 6899999999999999999999773 45
Q ss_pred EEEE-EEcCC--CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 385 VCFT-FKGME--GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 385 ~C~~-i~~~~--~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
.|++ |.... +.||||++|||++|+|||++++|||||+++
T Consensus 279 ~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 279 FCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 7986 77643 579999999999999999999999999975
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.4e-58 Score=441.01 Aligned_cols=298 Identities=22% Similarity=0.346 Sum_probs=252.9
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC--CcccCCCCCCCCCCCCccccccCCCcccCCcCCCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT--ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSC 156 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~--~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 156 (426)
++.+..+.+|+++|+||||+|++.|+|||||+++||+|..|. .| ..++.|||++|+||+..+
T Consensus 7 ~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 70 (323)
T 3cms_A 7 PLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNAC--KNHQRFDPRKSSTFQNLG-------------- 70 (323)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred eeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccc--cCCCCCCCccCCCeEECC--------------
Confidence 344567899999999999999999999999999999999994 67 567899999999999987
Q ss_pred CCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc--------
Q 043437 157 STEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS-------- 226 (426)
Q Consensus 157 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s-------- 226 (426)
|.|.+.|++|+. .|.+++|+|+|++. +++++.|||++...+ .| ....+||||||++..+
T Consensus 71 -----~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 139 (323)
T 3cms_A 71 -----KPLSIHYGTGSM-QGILGYDTVTVSNI-----VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVF 139 (323)
T ss_dssp -----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHH
T ss_pred -----cEEEEEeCCCCe-EEEEEEEEEEECCe-----EEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHH
Confidence 899999999985 59999999999987 999999999998865 34 4678999999998765
Q ss_pred --hhhhcccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCC
Q 043437 227 --LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDAS 302 (426)
Q Consensus 227 --l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 302 (426)
+.+| +.+.+++||+||.+... .|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. ..
T Consensus 140 ~~l~~q-~~i~~~~FS~~l~~~~~---~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~--~~ 209 (323)
T 3cms_A 140 DNMMNR-HLVAQDLFSVYMDRNGQ---ESMLTLGAIDPSYYTGS-LHWVPVTV---QQYWQFTVDSVTISGVVVAC--EG 209 (323)
T ss_dssp HHHHHT-TCSSSSEEEEECCTTSS---CEEEEESCCCGGGEEEE-EEEEECSS---BTTBEEEEEEEEETTEEEES--TT
T ss_pred HHHHHC-CCCCCCEEEEEECCCCC---CEEEEECCCChhhccCc-eEEEECcc---CCeEEEEEeeEEECCEEeec--CC
Confidence 3344 55778999999987432 4999999943 44444 99999986 67999999999999988764 45
Q ss_pred CCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC
Q 043437 303 EGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD 382 (426)
Q Consensus 303 ~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~ 382 (426)
...+||||||+++++|++++++|.+++.+... ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+++ .
T Consensus 210 ~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~--~ 279 (323)
T 3cms_A 210 GCQAILDTGTSKLVGPSSDILNIQQAIGATQN----QYGEFDI-DCDNLS---YMPTVVFEINGKMYPLTPSAYTSQ--D 279 (323)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHHHHTCEEE----TTTEEEE-CTTCTT---TSCCEEEEETTEEEEECHHHHEEE--E
T ss_pred CcEEEEecCCccEeCCHHHHHHHHHHhCCeec----CCCcEEE-ECCCCc---cCceEEEEECCEEEEECHHHhccC--C
Confidence 67999999999999999999999999865432 1233434 498654 689999999999999999999998 3
Q ss_pred CeEEEE-EEcC--CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 383 TSVCFT-FKGM--EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 383 ~~~C~~-i~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+..|++ |++. ++.||||++|||++|+|||++++|||||+++
T Consensus 280 ~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 280 QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 458987 8875 3789999999999999999999999999975
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=6.3e-58 Score=443.54 Aligned_cols=303 Identities=23% Similarity=0.400 Sum_probs=253.7
Q ss_pred ccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCC--CCCCc-------ccCCCCCCCCCCCCccccccCCCcc
Q 043437 77 AQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCK--PCTEC-------YKQAAPFFDPEQSSTYKDLSCDSRQ 147 (426)
Q Consensus 77 ~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~--~C~~C-------~~~~~~~y~~~~SsT~~~~~c~~~~ 147 (426)
+..++.+.+.+|+++|+||||+|++.|+|||||+++||++. +|..| .+..++.|||++|+|++..+
T Consensus 3 v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----- 77 (342)
T 2qzx_A 3 VAVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN----- 77 (342)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-----
T ss_pred eeEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-----
Confidence 45566778899999999999999999999999999999866 67633 22568899999999999987
Q ss_pred cCCcCCCCCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCCCCCCceeEeeCCCCC--
Q 043437 148 CTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSV-- 225 (426)
Q Consensus 148 C~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 225 (426)
|.|.+.|++|+.+.|.+++|+|+||+. .++++.|||++... ..+||||||+...
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 2qzx_A 78 --------------TRFDIKYGDGSYAKGKLYKDTVGIGGV-----SVRDQLFANVWSTS-----ARKGILGIGFQSGEA 133 (342)
T ss_dssp --------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEEC-----SSSCEEECSCGGGCS
T ss_pred --------------CcEEEEeCCCCeEEEEEEEEEEEECCE-----EecceEEEEEEecC-----CCcCEEEEccccccC
Confidence 899999999998779999999999987 99999999999863 5789999999754
Q ss_pred ------chhhhc---ccccCCeeEEeecCCCCCCCcceEEeCC--CCccCCCceEEeecccCCCCceEEEEEEEEEEcce
Q 043437 226 ------SLVTQM---GSSIGGKFSYCLVPFLSSESSSKINFGS--NGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKK 294 (426)
Q Consensus 226 ------sl~~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg--~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~ 294 (426)
+++.|| +.+.+++||+||.+... ..|.|+||| .+++.++ +.|+|+.. ..+|.|.+++|+|+++
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~--~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~g~ 207 (342)
T 2qzx_A 134 TEFDYDNLPISLRNQGIIGKAAYSLYLNSAEA--STGQIIFGGIDKAKYSGS-LVDLPITS---EKKLTVGLRSVNVRGR 207 (342)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCCTTC--SEEEEEETEEETTSBSSC-CEEEECCC---SSSCEEEEEEEEETTE
T ss_pred CCccCccHHHHHHHCCCcCccEEEEEeCCCCC--CCeEEEECccchhhEecc-eEEEeccC---CceEEEEEeEEEECCE
Confidence 333343 55678999999987532 589999999 4566665 99999987 4599999999999999
Q ss_pred eeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEE-ccceEEeCC
Q 043437 295 KIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHF-SGADVVLSP 373 (426)
Q Consensus 295 ~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f-~g~~~~l~~ 373 (426)
.+.. ...+||||||++++||++++++|++++.+.........+.+.+ +|+ .+|+|+|+| +|++++||+
T Consensus 208 ~~~~----~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~-~C~------~~p~i~f~f~~g~~~~i~~ 276 (342)
T 2qzx_A 208 NVDA----NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVA-DCK------TSGTIDFQFGNNLKISVPV 276 (342)
T ss_dssp EEEE----EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEE-CTT------CCCEEEEEETTTEEEEEEG
T ss_pred ecCC----CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEE-ECC------CCCcEEEEECCCcEEEEcH
Confidence 8875 5789999999999999999999999998765322111223444 497 479999999 579999999
Q ss_pred CceEEEcC-----CCeEEEE-EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 374 ENTFIRTS-----DTSVCFT-FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 374 ~~~~~~~~-----~~~~C~~-i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
++|+++.. .+..|++ |.+. +.||||+.|||++|+|||++++|||||+++|++
T Consensus 277 ~~~~~~~~~~~~~~~~~C~~~i~~~-~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 277 SEFLFQTYYTSGKPFPKCEVRIRES-EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp GGGEECCBCTTSCBCSSEEESEEEC-SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred HHhcccccccCCCCCCccEEEEecC-CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 99998742 2457988 6665 579999999999999999999999999999974
No 11
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-57 Score=438.72 Aligned_cols=298 Identities=25% Similarity=0.375 Sum_probs=252.4
Q ss_pred eecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCC
Q 043437 81 IISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEE 160 (426)
Q Consensus 81 ~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 160 (426)
.+..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.+..++.|||++|+|++..+
T Consensus 7 ~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------------ 68 (324)
T 1am5_A 7 KNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETG------------------ 68 (324)
T ss_dssp EEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEE------------------
T ss_pred ecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCC------------------
Confidence 34678999999999999999999999999999999999984222567899999999999987
Q ss_pred CceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCch------hhhc-
Q 043437 161 TCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVSL------VTQM- 231 (426)
Q Consensus 161 ~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~sl------~~ql- 231 (426)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+ .| ....+||||||++..+. +.+|
T Consensus 69 -~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 141 (324)
T 1am5_A 69 -KTVDLTYGTGGM-RGILGQDTVSVGGG-----SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMG 141 (324)
T ss_dssp -EEEEEECSSCEE-EEEEEEEEEESSSS-----CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHH
T ss_pred -cEEEEEECCCCe-EEEEEECceeECCc-----EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHH
Confidence 899999999987 59999999999987 999999999998866 34 56889999999987653 2222
Q ss_pred --ccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCCcEE
Q 043437 232 --GSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNII 307 (426)
Q Consensus 232 --~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~i 307 (426)
+.+.+++||+||.+... ..|.|+|||. +++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. . ...+|
T Consensus 142 ~qg~i~~~~FS~~l~~~~~--~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~--~-~~~ai 212 (324)
T 1am5_A 142 SQSLVEKDLFSFYLSGGGA--NGSEVMLGGVDNSHYTGS-IHWIPVTA---EKYWQVALDGITVNGQTAAC--E-GCQAI 212 (324)
T ss_dssp HTTCSSSSEEEEECCSTTC--SCEEEEESSCCGGGBCSC-CEEEEEEE---ETTEEEEECEEEETTEECCC--C-CEEEE
T ss_pred hcCCCCCCEEEEEecCCCC--CCcEEEECccCHHHcCCc-eEEEecCC---CcEEEEEEeEEEECCceeec--c-CceEE
Confidence 55678999999987533 4799999994 345555 99999986 67999999999999987543 2 38999
Q ss_pred EccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCCeEEE
Q 043437 308 IDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCF 387 (426)
Q Consensus 308 iDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~~~C~ 387 (426)
|||||+++++|++++++|.+++.+. . ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+++. +..|+
T Consensus 213 iDSGTt~~~lp~~~~~~l~~~~~~~-~----~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~ 281 (324)
T 1am5_A 213 VDTGTSKIVAPVSALANIMKDIGAS-E----NQGEMMG-NCASVQ---SLPDITFTINGVKQPLPPSAYIEGD--QAFCT 281 (324)
T ss_dssp ECTTCSSEEECTTTHHHHHHHHTCE-E----CCCCEEC-CTTSSS---SSCCEEEEETTEEEEECHHHHEEES--SSCEE
T ss_pred EecCCccEECCHHHHHHHHHHhCCc-c----cCCcEEE-eCCCcc---cCCcEEEEECCEEEEECHHHhcccC--CCeEE
Confidence 9999999999999999999998765 2 1334444 498654 6899999999999999999999987 45798
Q ss_pred E-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 388 T-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 388 ~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+ |.+. ++.||||+.|||++|+|||++++|||||+++
T Consensus 282 ~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 282 SGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp ECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred EEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 5 8754 2579999999999999999999999999975
No 12
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.2e-57 Score=442.97 Aligned_cols=306 Identities=22% Similarity=0.340 Sum_probs=256.4
Q ss_pred eecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC---CcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCC
Q 043437 81 IISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT---ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCS 157 (426)
Q Consensus 81 ~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~---~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 157 (426)
.+..+.+|+++|.||||+|++.|+|||||+++||+|..|. .| ..++.|||++|+||+..+
T Consensus 13 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~--------------- 75 (361)
T 1mpp_A 13 YDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGC--VGKRFFDPSSSSTFKETD--------------- 75 (361)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTC--CSSCCBCGGGCTTCEEEE---------------
T ss_pred ecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccC--CCCCcCCCccCCceEecC---------------
Confidence 3456889999999999999999999999999999999998 67 567899999999999987
Q ss_pred CCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC------CC-CCCCceeEeeCCCCCchh--
Q 043437 158 TEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG------TF-NENATGIVGLGGGSVSLV-- 228 (426)
Q Consensus 158 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~------~~-~~~~~GilGLg~~~~sl~-- 228 (426)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||++...+ .| ....+||||||++..++.
T Consensus 76 ----~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 145 (361)
T 1mpp_A 76 ----YNLNITYGTGGA-NGIYFRDSITVGGA-----TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEA 145 (361)
T ss_dssp ----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHH
T ss_pred ----CeEEEEECCceE-EEEEEEEEEEECCE-----EEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccc
Confidence 899999999985 59999999999987 999999999998765 34 567899999999766532
Q ss_pred ----------hhc---ccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCC-CceEEEEEEEEEEc
Q 043437 229 ----------TQM---GSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDP-DTFYFLTLESISVG 292 (426)
Q Consensus 229 ----------~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~-~~~w~v~l~~i~v~ 292 (426)
.+| +.+..++||+||.+. . ..|.|+|||. .++.++ +.|+|+..... ..+|.|.|++|+|+
T Consensus 146 ~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~--~-~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~~~~v~l~~i~v~ 221 (361)
T 1mpp_A 146 EYGDTYNTVHVNLYKQGLISSPVFSVYMNTN--D-GGGQVVFGGVNNTLLGGD-IQYTDVLKSRGGYFFWDAPVTGVKID 221 (361)
T ss_dssp HHSCCCCCHHHHHHHTTSSSSSEEEEECCCS--S-SEEEEEESSCCGGGBSSC-CEEEECEEETTEEEEEEEEEEEEEET
T ss_pred cccccCCCHHHHHHHcCCCCCcEEEEEecCC--C-CCcEEEEecCChhhcCCc-eEEEEcccCCCceeEEEEEEeEEEEC
Confidence 222 556789999999874 2 4799999994 345555 99999987521 22999999999999
Q ss_pred ceeeeecCCCCCcEE-EccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCC-CeEEEEE--c---
Q 043437 293 KKKIHFDDASEGNII-IDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKA-PQITVHF--S--- 365 (426)
Q Consensus 293 ~~~~~~~~~~~~~~i-iDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~-P~l~f~f--~--- 365 (426)
++.+.. .....+| |||||++++||++++++|++++.+.... ..+.+.+ +|+... .+ |+|+|+| +
T Consensus 222 ~~~~~~--~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~g~~~~-~C~~~~---~~~p~i~f~f~~g~~~ 292 (361)
T 1mpp_A 222 GSDAVS--FDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE---SQQGYTV-PCSKYQ---DSKTTFSLVLQKSGSS 292 (361)
T ss_dssp TEEEEE--EEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE---ETTEEEE-EHHHHT---TCCCEEEEEEECTTCS
T ss_pred Ceeecc--CCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC---CCCcEEE-ECCCcc---cCCCcEEEEEEcCCcC
Confidence 987743 2367899 9999999999999999999999765321 1233434 498643 57 9999999 7
Q ss_pred --cceEEeCCCceEEEcC-CCeEEEE-EEcC-CCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 366 --GADVVLSPENTFIRTS-DTSVCFT-FKGM-EGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 366 --g~~~~l~~~~~~~~~~-~~~~C~~-i~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
|++++|++++|+++.. ++..|+. |.+. ++.||||++|||++|+|||++++|||||+++|+.
T Consensus 293 ~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 293 SDTIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp SCEEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred CCCeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 8999999999999875 3468985 8774 4789999999999999999999999999999974
No 13
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.5e-57 Score=437.98 Aligned_cols=302 Identities=23% Similarity=0.387 Sum_probs=256.2
Q ss_pred ccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeee-----CCCCCCcccCCCCCCCCCCCCccccccCCCcccCCc
Q 043437 77 AQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQ-----CKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAY 151 (426)
Q Consensus 77 ~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~-----~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~ 151 (426)
+..++...+.+|+++|.||||+|++.|+|||||+++||+ |..|..| ..++.|||++|+||+..+
T Consensus 3 i~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~--------- 71 (339)
T 3fv3_A 3 ISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDC--KSSGTFTPSSSSSYKNLG--------- 71 (339)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCT--TTTCCBCGGGCTTCEEEE---------
T ss_pred eeeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCC--CCCCcCCCccCcceeeCC---------
Confidence 566788889999999999999999999999999999998 5555577 568899999999999987
Q ss_pred CCCCCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCCCCCCceeEeeCCCCCc-----
Q 043437 152 ERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVS----- 226 (426)
Q Consensus 152 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s----- 226 (426)
|.|.+.|++|+.+.|.+++|+|+||+. .++++.||+++.... .+||||||++..+
T Consensus 72 ----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~~ 131 (339)
T 3fv3_A 72 ----------AAFTIRYGDGSTSQGTWGKDTVTINGV-----SITGQQIADVTQTSV-----DQGILGIGYTSNEAVYDT 131 (339)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBCT
T ss_pred ----------ceEEEEECCCceEEEEEEEEEEEECCE-----EECceEEEEEEecCC-----CceeEEecCccccccccc
Confidence 999999999987779999999999987 999999999998753 5899999997653
Q ss_pred -----------hhhhc---ccccCCeeEEeecCCCCCCCcceEEeCC--CCccCCCceEEeecccCCCCceEEEEEEEEE
Q 043437 227 -----------LVTQM---GSSIGGKFSYCLVPFLSSESSSKINFGS--NGVVSGTGVVTTPLVAKDPDTFYFLTLESIS 290 (426)
Q Consensus 227 -----------l~~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg--~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~ 290 (426)
++.|| +.+.+++||+||.+... ..|.|+||| ..++.++ +.|+|+.. ..+|.|++++|.
T Consensus 132 ~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~--~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~ 205 (339)
T 3fv3_A 132 SGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSA--ETGTIIFGGVDNAKYSGK-LVAEQVTS---SQALTISLASVN 205 (339)
T ss_dssp TSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTC--SEEEEEETEEETTSBSSC-CEEEEBCC---SSSCEEEEEEEE
T ss_pred cccccCccCCcHHHHHHHCCCCCCceEEEEECCCCC--CCeEEEEeeechHHeecc-eEEEeccc---CccEEEEEEEEE
Confidence 34443 55688999999987533 489999999 5566666 99999987 569999999999
Q ss_pred EcceeeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEc-cceE
Q 043437 291 VGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFS-GADV 369 (426)
Q Consensus 291 v~~~~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~-g~~~ 369 (426)
|+++.+.. ...++|||||++++||++++++|++++.+.+.......+.+.+ +|+.. .+|+|+|+|+ |+++
T Consensus 206 v~g~~~~~----~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~-~C~~~----~~p~i~f~f~~g~~~ 276 (339)
T 3fv3_A 206 LKGSSFSF----GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFI-DCNTD----TSGTTVFNFGNGAKI 276 (339)
T ss_dssp ESSCEEEE----EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEE-CTTCC----CCSEEEEEETTSCEE
T ss_pred ECCEeecC----CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEE-ecCCC----CCCcEEEEECCCCEE
Confidence 99998876 5789999999999999999999999998765421111233444 59852 5899999995 7999
Q ss_pred EeCCCceEEEcCCCeEEEE-EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 370 VLSPENTFIRTSDTSVCFT-FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 370 ~l~~~~~~~~~~~~~~C~~-i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
+||+++|+++..+ ..|+. |.+ ++.||||++|||++|+|||++++|||||+++|++
T Consensus 277 ~v~~~~~~~~~~~-~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 277 TVPNTEYVYQNGD-GTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp EEEGGGGEEECSS-SCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred EECHHHheeeCCC-CeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 9999999998654 46865 887 5789999999999999999999999999999974
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.3e-57 Score=438.68 Aligned_cols=301 Identities=25% Similarity=0.366 Sum_probs=252.0
Q ss_pred eecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCC
Q 043437 81 IISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEE 160 (426)
Q Consensus 81 ~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 160 (426)
....+.+|+++|+||||+|++.|+|||||+++||+|..|..|.++.++.|||++|+|++.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~----------------- 72 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSG----------------- 72 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTT-----------------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCC-----------------
Confidence 456788999999999999999999999999999999999999888899999999999998642
Q ss_pred CceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC--CCCCceeEeeCCCCCch---------hh
Q 043437 161 TCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF--NENATGIVGLGGGSVSL---------VT 229 (426)
Q Consensus 161 ~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~sl---------~~ 229 (426)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.| ....+||||||++..+. ++
T Consensus 73 -~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 146 (329)
T 3c9x_A 73 -ASWSISYGDGSSSSGDVYTDKVTIGGF-----SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFS 146 (329)
T ss_dssp -CBEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHH
Confidence 899999999997679999999999987 99999999999876644 36789999999976653 33
Q ss_pred hcc-cccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCCcE
Q 043437 230 QMG-SSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNI 306 (426)
Q Consensus 230 ql~-~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 306 (426)
+|. .+.+++||+||.+. ..|.|+|||.+ ++.++ +.|+|+... ..+|.|.+++|+|+++.+. .....+
T Consensus 147 ~l~~~i~~~~FS~~l~~~----~~G~l~fGg~d~~~~~g~-l~~~p~~~~--~~~~~v~l~~i~v~~~~~~---~~~~~a 216 (329)
T 3c9x_A 147 NAASSLAEPLFTADLRHG----QNGSYNFGYIDTSVAKGP-VAYTPVDNS--QGFWEFTASGYSVGGGKLN---RNSIDG 216 (329)
T ss_dssp HHHTTSSSSEEEEECCSS----SCEEEEESSCCGGGCSSC-EEEEECBCT--TSSCEEEECCEEETTCCCC---SCCEEE
T ss_pred HHHHhcCCCEEEEEecCC----CCcEEEEeCcChhhcccc-eEEEEccCC--CceEEEEEeeEEECCEecc---CCCceE
Confidence 332 25689999999762 47999999943 55555 999999853 6799999999999998764 346799
Q ss_pred EEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC--Ce
Q 043437 307 IIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD--TS 384 (426)
Q Consensus 307 iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~--~~ 384 (426)
||||||++++||++++++|++++.+..... ..+.+.++ |+. .+|+|+|+|+|++++||+++|++...+ ..
T Consensus 217 iiDSGTt~~~lp~~~~~~i~~~i~~a~~~~--~~~~~~~~-C~~-----~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~ 288 (329)
T 3c9x_A 217 IADTGTTLLLLDDNVVDAYYANVQSAQYDN--QQEGVVFD-CDE-----DLPSFSFGVGSSTITIPGDLLNLTPLEEGSS 288 (329)
T ss_dssp EECTTCCSEEECHHHHHHHHTTCTTCEEET--TTTEEEEE-TTC-----CCCCEEEEETTEEEEECGGGGEEEESSTTCS
T ss_pred EEECCCCcEeCCHHHHHHHHHhCCCcEEcC--CCCEEEEE-CCC-----CCCcEEEEECCEEEEECHHHeeeeccCCCCC
Confidence 999999999999999999988874432111 12334344 982 689999999999999999999887532 36
Q ss_pred EEEE-EEcCC--CcceechhhhccEEEEEECCCCEEEEeeC
Q 043437 385 VCFT-FKGME--GQSIYGNLAQANFLVGYDTKAKTVSFKPT 422 (426)
Q Consensus 385 ~C~~-i~~~~--~~~ilG~~fl~~~y~vfD~~~~~igfa~~ 422 (426)
.|++ |.+.+ +.||||+.|||++|+|||++++|||||+.
T Consensus 289 ~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 289 TCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp EEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred eEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 8998 77653 68999999999999999999999999984
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.5e-57 Score=438.50 Aligned_cols=300 Identities=25% Similarity=0.411 Sum_probs=252.3
Q ss_pred cCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCCCc
Q 043437 83 SALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETC 162 (426)
Q Consensus 83 ~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~~ 162 (426)
..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.+..++.|||++|+|++..+ |
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~-------------------~ 69 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNG-------------------Q 69 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEE-------------------E
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECC-------------------c
Confidence 778899999999999999999999999999999999985222567899999999999987 8
Q ss_pred eeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCch------hhhc---
Q 043437 163 EYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVSL------VTQM--- 231 (426)
Q Consensus 163 ~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~sl------~~ql--- 231 (426)
.|.+.|++|+. .|.+++|+|+||+. +++++.|||+....+ .| ....+||||||++..+. +++|
T Consensus 70 ~~~i~Yg~gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q 143 (329)
T 1htr_B 70 TFSLQYGSGSL-TGFFGYDTLTVQSI-----QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQE 143 (329)
T ss_dssp EEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHT
T ss_pred EEEEEeCCCCe-EEEEEeeeEEEcce-----EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhc
Confidence 99999999987 59999999999987 999999999998766 34 56789999999987652 2222
Q ss_pred ccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCCcEEEc
Q 043437 232 GSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIID 309 (426)
Q Consensus 232 ~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~iiD 309 (426)
+.+.+++||+||.+.... ..|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. ......+|||
T Consensus 144 g~i~~~~Fs~~L~~~~~~-~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~-~~~~~~aiiD 217 (329)
T 1htr_B 144 GALTSPVFSVYLSNQQGS-SGGAVVFGGVDSSLYTGQ-IYWAPVTQ---ELYWQIGIEEFLIGGQASGW-CSEGCQAIVD 217 (329)
T ss_dssp TCSSSSEEEEEECSSCSS-EEEEEEESSCCGGGEEEE-EEEEEBCS---SSSCEEEECEEEETTEECCT-TTTCEEEEEC
T ss_pred CCCCCCEEEEEEcCCCCC-CCcEEEEcccCHHHcCCc-eEEEECCC---CceEEEEEeEEEECCceeee-cCCCceEEEe
Confidence 556789999999875332 37999999943 44444 99999986 67999999999999987541 1346789999
Q ss_pred cCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCCCeEEEE-
Q 043437 310 SGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSDTSVCFT- 388 (426)
Q Consensus 310 TGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~~~~C~~- 388 (426)
|||+++++|++++++|.+++.+... ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+++.. + .|++
T Consensus 218 SGTt~~~lp~~~~~~l~~~~~~~~~----~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~~ 287 (329)
T 1htr_B 218 TGTSLLTVPQQYMSALLQATGAQED----EYGQFLV-NCNSIQ---NLPSLTFIINGVEFPLPPSSYILSNN-G-YCTVG 287 (329)
T ss_dssp TTCCSEEEEGGGHHHHHHHHTCEEC----TTSCEEE-CGGGGG---GSCCEEEEETTEEEEECHHHHEEECS-S-CEEES
T ss_pred cCCccEECCHHHHHHHHHHhCCeec----CCCeEEE-eCCCcc---cCCcEEEEECCEEEEECHHHhcccCC-C-EEEEE
Confidence 9999999999999999999876542 1333444 498653 68999999999999999999999876 3 8986
Q ss_pred EEcC------CC-cceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 389 FKGM------EG-QSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 389 i~~~------~~-~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
|.+. +. .||||+.|||++|+|||++++|||||+++
T Consensus 288 ~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 288 VEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 7653 24 79999999999999999999999999975
No 16
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.7e-57 Score=442.18 Aligned_cols=294 Identities=21% Similarity=0.336 Sum_probs=250.2
Q ss_pred ecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCCC
Q 043437 82 ISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEET 161 (426)
Q Consensus 82 ~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 161 (426)
+..+.+|+++|.||||+|++.|+|||||+++||+|..|..+.|..++.|||++|+||+..+
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~------------------- 118 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDG------------------- 118 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEE-------------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECC-------------------
Confidence 4567899999999999999999999999999999999974333668999999999999987
Q ss_pred ceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEe----cCCCC-CCCCceeEeeCCCCCch---------
Q 043437 162 CEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHN----DDGTF-NENATGIVGLGGGSVSL--------- 227 (426)
Q Consensus 162 ~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~sl--------- 227 (426)
|.|.+.|++|+. .|.+++|+|+||+. .+++ .|||++. .. .| ....+||||||++..+.
T Consensus 119 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~~ 190 (375)
T 1miq_A 119 TKVDITYGSGTV-KGFFSKDLVTLGHL-----SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVVE 190 (375)
T ss_dssp EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHHH
T ss_pred cEEEEEeCCCeE-EEEEEEEEEEEcCc-----eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHHH
Confidence 899999999985 59999999999987 9999 9999998 54 45 56789999999987653
Q ss_pred -hhhcccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCC
Q 043437 228 -VTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEG 304 (426)
Q Consensus 228 -~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 304 (426)
.+| +.+..++||+||.+.+. ..|.|+|||.+ ++.++ +.|+|+.. ..+|.|.++ |+||++.+ . ..
T Consensus 191 l~~q-g~i~~~~FS~~L~~~~~--~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~w~v~l~-i~v~g~~~-~----~~ 257 (375)
T 1miq_A 191 LKNQ-NKIDNALFTFYLPVHDV--HAGYLTIGGIEEKFYEGN-ITYEKLNH---DLYWQIDLD-VHFGKQTM-E----KA 257 (375)
T ss_dssp HHHT-TSSSSSEEEEECCTTCT--TEEEEEESSCCGGGEEEE-EEEEEBSS---SSSSEEEEE-EEETTEEE-E----EE
T ss_pred HHhc-cCcCCCEEEEEecCCCC--CCeEEEEcccCHHHcCCc-eEEEecCC---CceEEEEEE-EEECCEEc-c----cc
Confidence 334 55778999999987532 48999999943 44444 99999985 679999999 99999877 2 67
Q ss_pred cEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcC--C
Q 043437 305 NIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTS--D 382 (426)
Q Consensus 305 ~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~--~ 382 (426)
.+||||||+++++|++++++|.+++.+.... ..+.+.+ +|+. . .+|+|+|+|+|++++|++++|+++.. +
T Consensus 258 ~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~---~~g~~~~-~C~~-~---~~P~i~f~f~g~~~~l~~~~yi~~~~~~g 329 (375)
T 1miq_A 258 NVIVDSGTTTITAPSEFLNKFFANLNVIKVP---FLPFYVT-TCDN-K---EMPTLEFKSANNTYTLEPEYYMNPILEVD 329 (375)
T ss_dssp EEEECTTBSSEEECHHHHHHHHHHHTCEECT---TSSCEEE-ETTC-T---TCCCEEEECSSCEEEECGGGSEEESSSSS
T ss_pred eEEecCCCccEEcCHHHHHHHHHHhCCcccC---CCCeEEE-ECCC-C---CCCcEEEEECCEEEEECHHHhEeeccCCC
Confidence 8999999999999999999999999765321 1334444 4996 2 68999999999999999999999875 3
Q ss_pred CeEEEE-EEcCC---CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 383 TSVCFT-FKGME---GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 383 ~~~C~~-i~~~~---~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
...|+. |++.+ +.||||++|||++|+|||++++|||||+++
T Consensus 330 ~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 330 DTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp CSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 458985 88765 689999999999999999999999999975
No 17
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=7.7e-57 Score=451.49 Aligned_cols=308 Identities=25% Similarity=0.412 Sum_probs=250.4
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC---CcccCCCCCCCCCCCCccccccCCCcccCCcCCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT---ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTS 155 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~---~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~ 155 (426)
++.+..+.+|+++|+||||+|+|.|+|||||+++||+|..|. .| ..++.|||++|+||+..+
T Consensus 45 ~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~------------- 109 (478)
T 1qdm_A 45 ALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIAC--YLHSRYKAGASSTYKKNG------------- 109 (478)
T ss_dssp GGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGG--GGSCCBCGGGCTTCBCCC-------------
T ss_pred EeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccc--cCCCCCCcccCCCeeeCC-------------
Confidence 333456889999999999999999999999999999999996 68 456899999999999876
Q ss_pred CCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc-------
Q 043437 156 CSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS------- 226 (426)
Q Consensus 156 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------- 226 (426)
+.|.+.|++|+. .|++++|+|+||+. .++++.||+++...+ .| ....+||||||++.++
T Consensus 110 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~ 177 (478)
T 1qdm_A 110 ------KPAAIQYGTGSI-AGYFSEDSVTVGDL-----VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPV 177 (478)
T ss_dssp ------CEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCH
T ss_pred ------cEEEEEcCCCCe-EEEEEEEEEEECCe-----EECCEEEEEEEecCCcccccccccceecccccccccCCCCcH
Confidence 899999999985 59999999999987 999999999998765 34 5678999999998776
Q ss_pred ---hhhhcccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCC
Q 043437 227 ---LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDA 301 (426)
Q Consensus 227 ---l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~ 301 (426)
+++| +.+..++||+||.+.......|.|+|||. .++.++ +.|+|+.. ..+|.|.+++|.||++.+... .
T Consensus 178 ~~~l~~q-g~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~-l~~~pv~~---~~~w~v~l~~i~v~g~~~~~~-~ 251 (478)
T 1qdm_A 178 WYKMIEQ-GLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGE-HTYVPVTQ---KGYWQFDMGDVLVGGKSTGFC-A 251 (478)
T ss_dssp HHHHTTT-TCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEE-EEEEEEEE---ETTEEEEECCEEETTEECSTT-T
T ss_pred HHHHHHC-CCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCC-ceEEeccC---CCeEEEEEeEEEECCEEEeec-C
Confidence 3445 56778999999987521115799999993 344444 99999986 679999999999999876542 3
Q ss_pred CCCcEEEccCCccccCcHHHHHHHHHHHHhhc----------------------------------cCC-----------
Q 043437 302 SEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLI----------------------------------KAD----------- 336 (426)
Q Consensus 302 ~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~----------------------------------~~~----------- 336 (426)
.+..+||||||+++++|++++++|.+++.+.. +..
T Consensus 252 ~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~ 331 (478)
T 1qdm_A 252 GGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAG 331 (478)
T ss_dssp TCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC-----------
T ss_pred CCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccc
Confidence 46789999999999999999999999886421 000
Q ss_pred -------------------------------------------------------CCCCCCCCccccccCCCCCCCCeEE
Q 043437 337 -------------------------------------------------------PISDPEGVLDLCYPYSSDFKAPQIT 361 (426)
Q Consensus 337 -------------------------------------------------------~~~~~~~~~~~C~~~~~~~~~P~l~ 361 (426)
....+.+.++ |.... .+|+|+
T Consensus 332 ~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~-C~~~~---~lP~i~ 407 (478)
T 1qdm_A 332 IRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVD-CGSLG---SMPDIE 407 (478)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEEC-GGGGT---TCCCEE
T ss_pred ccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEee-ccccc---ccccEE
Confidence 0001223344 76433 689999
Q ss_pred EEEccceEEeCCCceEEEcCC--CeEEEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 362 VHFSGADVVLSPENTFIRTSD--TSVCFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 362 f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
|+|+|++++|+|++|+++... ...|++ |... ++.||||+.|||++|+|||++++|||||++.
T Consensus 408 f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 408 FTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp EEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 999999999999999998764 357987 7643 2579999999999999999999999999974
No 18
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.9e-57 Score=447.08 Aligned_cols=327 Identities=20% Similarity=0.363 Sum_probs=255.4
Q ss_pred ecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCC------
Q 043437 82 ISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTS------ 155 (426)
Q Consensus 82 ~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~------ 155 (426)
+..+++|+++|.||||+|++.|+|||||+++||+|.+| .+|+|++.+.|.++.|.......
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~-------------~~Sst~~~~~C~s~~C~~~~~~~c~~c~~ 83 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ-------------YSSKTYQAPFCHSTQCSRANTHQCLSCPA 83 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC-------------CCCSSCBCCCTTBHHHHHTTCCCEEECSS
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC-------------CCCCCCCccCCCCccccCccccCccccCC
Confidence 34688999999999999999999999999999998764 57999999999999997655432
Q ss_pred -----CCCCCCceeeeEeC-CCCeeeeeEEEEEEEecCCCCCC------ceeceeeeeeeEecCCC-C-CCCCceeEeeC
Q 043437 156 -----CSTEETCEYSATYG-DRSFSNGNLAVETVTLGSTNGRP------AALRNIIFGCGHNDDGT-F-NENATGIVGLG 221 (426)
Q Consensus 156 -----c~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~ig~~~~~~------~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg 221 (426)
|. .+.|.|.+.|+ +++.+.|++++|+|+|++.++.. +.++++.|||+...... + ....+||||||
T Consensus 84 ~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg 162 (403)
T 3aup_A 84 ASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLG 162 (403)
T ss_dssp SCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECS
T ss_pred CCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECC
Confidence 32 24699999998 77777799999999999854332 58999999999987543 3 46789999999
Q ss_pred CCCCchhhhccc--ccCCeeEEeecCCCCCCCcceEEeCC-CCcc--C-C----CceEEeecccCCCCceEEEEEEEEEE
Q 043437 222 GGSVSLVTQMGS--SIGGKFSYCLVPFLSSESSSKINFGS-NGVV--S-G----TGVVTTPLVAKDPDTFYFLTLESISV 291 (426)
Q Consensus 222 ~~~~sl~~ql~~--~~~~~Fs~~l~~~~~~~~~G~l~~Gg-~~~~--~-~----~~~~~~p~~~~~~~~~w~v~l~~i~v 291 (426)
++.++++.|++. +..++||+||.+... ..|.|+||| ..++ . | ..+.|+|++..+ ..+|.|.|++|+|
T Consensus 163 ~~~~s~~~ql~~~~~~~~~FS~~L~~~~~--~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~-~~~y~v~l~~i~v 239 (403)
T 3aup_A 163 HAPISLPNQLASHFGLQRQFTTCLSRYPT--SKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITL-QGEYNVRVNSIRI 239 (403)
T ss_dssp SSTTSHHHHHHHHHTCCSEEEEECCSCTT--SCEEEEESCHHHHC--CTTCCTTTTEEEEECEECT-TSCEEECEEEEEE
T ss_pred CCCcCHHHHHHhhcCCCCeEEEEcCCCCC--CCeeEEECCCchhccccccccccCceeecccccCC-CCcceEEEEEEEE
Confidence 999999988754 467899999987532 579999999 2233 2 3 249999999854 3699999999999
Q ss_pred cceee-eecC-------CCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEE
Q 043437 292 GKKKI-HFDD-------ASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVH 363 (426)
Q Consensus 292 ~~~~~-~~~~-------~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~ 363 (426)
|++.+ .++. .+...+||||||++++||++++++|++++.+++...........+..|++......+|+|+|+
T Consensus 240 ~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i~f~ 319 (403)
T 3aup_A 240 NQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLV 319 (403)
T ss_dssp TTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCEEEE
T ss_pred CCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcEEEE
Confidence 99887 5432 124569999999999999999999999997765321110000111224432111168999999
Q ss_pred Eccc---eEEeCCCceEEEcCCCeEEEEEEcCC----CcceechhhhccEEEEEECCCCEEEE-------eeCCCC
Q 043437 364 FSGA---DVVLSPENTFIRTSDTSVCFTFKGME----GQSIYGNLAQANFLVGYDTKAKTVSF-------KPTDCS 425 (426)
Q Consensus 364 f~g~---~~~l~~~~~~~~~~~~~~C~~i~~~~----~~~ilG~~fl~~~y~vfD~~~~~igf-------a~~~c~ 425 (426)
|+|. +++|++++|+++..++..|++|+..+ +.||||+.|||++|+|||++++|||| ++++|+
T Consensus 320 f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~ 395 (403)
T 3aup_A 320 MDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCA 395 (403)
T ss_dssp ESSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGG
T ss_pred EcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCcc
Confidence 9984 99999999999876667899988764 57999999999999999999999999 677775
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4e-57 Score=435.35 Aligned_cols=300 Identities=25% Similarity=0.358 Sum_probs=249.5
Q ss_pred eecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCC
Q 043437 81 IISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEE 160 (426)
Q Consensus 81 ~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 160 (426)
....+.+|+++|.||||+|++.|+|||||+++||+|.+|..|.+ .++.|||++|+|++.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~~~~y~~~~SsT~~~~~~----------------- 71 (329)
T 1oew_A 10 IDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-XQTIYTPSKSTTAKLLSG----------------- 71 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEE-----------------
T ss_pred cCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-ccCccCCccCccceecCC-----------------
Confidence 34578899999999999999999999999999999999999977 788999999999998531
Q ss_pred CceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC--CCCCceeEeeCCCCCch---------hh
Q 043437 161 TCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF--NENATGIVGLGGGSVSL---------VT 229 (426)
Q Consensus 161 ~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~sl---------~~ 229 (426)
|.|.+.|++|+.+.|.+++|+|+||+. .++++.|||++...+.| ....+||||||++..++ ++
T Consensus 72 -~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~ 145 (329)
T 1oew_A 72 -ATWSISYGDGSSSSGDVYTDTVSVGGL-----TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFD 145 (329)
T ss_dssp -EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHH
T ss_pred -CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHH
Confidence 899999999997679999999999987 99999999999876644 36789999999976653 34
Q ss_pred hcc-cccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCCcE
Q 043437 230 QMG-SSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNI 306 (426)
Q Consensus 230 ql~-~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~ 306 (426)
||. .+..++||+||.+. ..|.|+|||. +++.++ +.|+|+... ..+|.|.+++|+|+++.+.. ....+
T Consensus 146 ~l~~~i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~g~-l~~~p~~~~--~~~~~v~l~~i~v~~~~~~~---~~~~a 215 (329)
T 1oew_A 146 NAKASLDSPVFTADLGYH----APGTYNFGFIDTTAYTGS-ITYTAVSTK--QGFWEWTSTGYAVGSGTFKS---TSIDG 215 (329)
T ss_dssp HHTTTSSSSEEEEECCSS----SCEEEEESCCCTTSSSSC-CEEEECBCT--TSSCEEEEEEEEETTSCCEE---EEEEE
T ss_pred HHHHhccCcEEEEEccCC----CCeEEEEeccChHhcccc-eEEEEccCC--CceEEEEEeeEEECCeeccC---CCceE
Confidence 433 25689999999762 4799999993 455555 999999853 67999999999999987652 36789
Q ss_pred EEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcC--CCe
Q 043437 307 IIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTS--DTS 384 (426)
Q Consensus 307 iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~--~~~ 384 (426)
||||||+++++|++++++|++++.+..... ..+.+.+ +|+. .+|+|+|+|+|++++||+++|++... +..
T Consensus 216 iiDSGTt~~~lP~~~~~~l~~~i~~a~~~~--~~g~~~~-~C~~-----~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~ 287 (329)
T 1oew_A 216 IADTGTTLLYLPATVVSAYWAQVSGAKSSS--SVGGYVF-PCSA-----TLPSFTFGVGSARIVIPGDYIDFGPISTGSS 287 (329)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTTCEEET--TTTEEEE-ETTC-----CCCCEEEEETTEEEEECHHHHEEEESSTTCS
T ss_pred EEeCCCCCEECCHHHHHHHHHhCCCcEEcC--CCCEEEE-ECCC-----CCCcEEEEECCEEEEECHHHeeeeecCCCCC
Confidence 999999999999999999988874432111 1233444 4982 68999999999999999999988753 246
Q ss_pred EEEE-EEcCC--CcceechhhhccEEEEEEC-CCCEEEEeeC
Q 043437 385 VCFT-FKGME--GQSIYGNLAQANFLVGYDT-KAKTVSFKPT 422 (426)
Q Consensus 385 ~C~~-i~~~~--~~~ilG~~fl~~~y~vfD~-~~~~igfa~~ 422 (426)
.|++ |.+.+ +.||||+.|||++|+|||+ +++|||||+.
T Consensus 288 ~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 288 SCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp EEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred eEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 8998 77653 6899999999999999999 9999999984
No 20
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.1e-56 Score=435.17 Aligned_cols=302 Identities=24% Similarity=0.398 Sum_probs=252.0
Q ss_pred ccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCC--CC---------CcccCCCCCCCCCCCCccccccCCC
Q 043437 77 AQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKP--CT---------ECYKQAAPFFDPEQSSTYKDLSCDS 145 (426)
Q Consensus 77 ~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~--C~---------~C~~~~~~~y~~~~SsT~~~~~c~~ 145 (426)
+.+++..++++|+++|.||||+|++.|++||||+++||++.. |. .| ..++.|+|++|+|++..+
T Consensus 3 v~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~--- 77 (342)
T 3pvk_A 3 VPVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQDLN--- 77 (342)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEEEE---
T ss_pred cceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceeecC---
Confidence 456677788999999999999999999999999999998664 63 45 568899999999999987
Q ss_pred cccCCcCCCCCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCCCCCCceeEeeCCCCC
Q 043437 146 RQCTAYERTSCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSV 225 (426)
Q Consensus 146 ~~C~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~ 225 (426)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.||+++... ..+||||||++..
T Consensus 78 ----------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~ 131 (342)
T 3pvk_A 78 ----------------TPFKIGYGDGSSSQGTLYKDTVGFGGV-----SIKNQVLADVDSTS-----IDQGILGVGYKTN 131 (342)
T ss_dssp ----------------EEEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGG
T ss_pred ----------------CeEEEEecCCCeEEEEEEEEEEEECCE-----EecceEEEEEEccC-----CCccEEEecCccc
Confidence 999999999997779999999999987 99999999998864 5789999999864
Q ss_pred -------chhhhc---ccccCCeeEEeecCCCCCCCcceEEeCC--CCccCCCceEEeecccCCCCceEEEEEEEEEEcc
Q 043437 226 -------SLVTQM---GSSIGGKFSYCLVPFLSSESSSKINFGS--NGVVSGTGVVTTPLVAKDPDTFYFLTLESISVGK 293 (426)
Q Consensus 226 -------sl~~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg--~~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~ 293 (426)
+++.|| +.+.+++||+||.+... ..|.|+||| ..++.++ +.|+|+.. ..+|.|.+++|.|++
T Consensus 132 ~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~--~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~g 205 (342)
T 3pvk_A 132 EAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDA--ATGQIIFGGVDNAKYSGS-LIALPVTS---DRELRISLGSVEVSG 205 (342)
T ss_dssp CSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTC--SEEEEEETEEETTSBSSC-CEEEECCC---SSSCEEEEEEEEETT
T ss_pred cccccCCcHHHHHHhcCCCCCceEEEEeCCCCC--CCcEEEECccCccceeee-eEEeecCc---cceEEEEEeEEEECC
Confidence 343333 56788999999987533 479999999 5566666 99999987 459999999999999
Q ss_pred eeeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEc-cceEEeC
Q 043437 294 KKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFS-GADVVLS 372 (426)
Q Consensus 294 ~~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~-g~~~~l~ 372 (426)
+.+..+ ...++|||||++++||++++++|++++.+...........+.+ +|+ ..|+|+|+|+ |.+++||
T Consensus 206 ~~~~~~---~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~-~C~------~~p~i~f~f~~g~~~~vp 275 (342)
T 3pvk_A 206 KTINTD---NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEV-DCN------LSGDVVFNFSKNAKISVP 275 (342)
T ss_dssp EEEEEE---EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEE-CSC------CCSEEEEEESTTCEEEEE
T ss_pred EEecCC---CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEE-ecC------CCCceEEEECCCCEEEEc
Confidence 988752 4789999999999999999999999998766432111112434 598 5699999998 7999999
Q ss_pred CCceEEEcC--CC---eEEEE-EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 373 PENTFIRTS--DT---SVCFT-FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 373 ~~~~~~~~~--~~---~~C~~-i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
+++|+++.. ++ ..|++ |.+. +.||||+.|||++|+|||++++|||||+++|+.
T Consensus 276 ~~~~~~~~~~~~g~~~~~C~~~i~~~-~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 276 ASEFAASLQGDDGQPYDKCQLLFDVN-DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp GGGGEEC----------CEEESEEEC-TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred HHHheeeccccCCCcCCeeEEEEeeC-CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 999998732 22 57987 7664 789999999999999999999999999999973
No 21
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.4e-57 Score=437.09 Aligned_cols=301 Identities=21% Similarity=0.350 Sum_probs=255.4
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC----CcccCCCCCCCCCCCCccccccCCCcccCCcCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT----ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERT 154 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~----~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 154 (426)
++.+..+.+|+++|+||||+|++.|+|||||+++||+|..|. .| ..++.|+|++|+|++...
T Consensus 11 ~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~------------ 76 (341)
T 3k1w_A 11 ILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG------------ 76 (341)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred cceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC------------
Confidence 344567899999999999999999999999999999999998 56 567899999999999876
Q ss_pred CCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCC-C-CCCCceeEeeCCCCCc------
Q 043437 155 SCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGT-F-NENATGIVGLGGGSVS------ 226 (426)
Q Consensus 155 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------ 226 (426)
|.|.+.|++|+. .|.+++|+|+||+. .+ ++.|||++..... | ....+||||||++..+
T Consensus 77 -------~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 142 (341)
T 3k1w_A 77 -------TELTLRYSTGTV-SGFLSQDIITVGGI-----TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 142 (341)
T ss_dssp -------EEEEEEETTEEE-EEEEEEEEEEETTE-----EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------CEEEEEECCcEE-EEEEEEEEEEECCc-----ee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCC
Confidence 899999999985 59999999999987 88 9999999988763 4 5678999999998765
Q ss_pred ----hhhhcccccCCeeEEeecCCCCC--CCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeee
Q 043437 227 ----LVTQMGSSIGGKFSYCLVPFLSS--ESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHF 298 (426)
Q Consensus 227 ----l~~ql~~~~~~~Fs~~l~~~~~~--~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 298 (426)
+++| +.+.+++||+||.+.... ...|.|+|||. .++.++ +.|+|+.. ..+|.|.+++|+|+++.+..
T Consensus 143 ~~~~l~~q-g~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~w~v~l~~i~v~~~~~~~ 217 (341)
T 3k1w_A 143 IFDNIISQ-GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN-FHYINLIK---TGVWQIQMKGVSVGSSTLLC 217 (341)
T ss_dssp HHHHHHHH-TCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEE-EEEEECSS---TTSCEEEECCEEETTEEEEC
T ss_pred HHHHHHHC-CCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCc-eEEEecCC---CCEEEEEEeEEEECCEEeec
Confidence 4455 667899999999876411 14799999993 344444 99999985 78999999999999987554
Q ss_pred cCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEE
Q 043437 299 DDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFI 378 (426)
Q Consensus 299 ~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~ 378 (426)
.....++|||||+++++|++++++|++++.+.... .+ +.++ |.... .+|+|+|+|+|++++|++++|++
T Consensus 218 --~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~----~g-~~~~-C~~~~---~~p~i~f~f~g~~~~l~~~~~~~ 286 (341)
T 3k1w_A 218 --EDGCLALVDTGASYISGSTSSIEKLMEALGAKKRL----FD-YVVK-CNEGP---TLPDISFHLGGKEYTLTSADYVF 286 (341)
T ss_dssp --TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS----SC-EEEE-GGGGG---GCCCEEEEETTEEEEECHHHHBC
T ss_pred --CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecC----CC-eEEe-CCCCC---cCCcEEEEECCEEEEECHHHhee
Confidence 45679999999999999999999999999765421 23 5455 98653 68999999999999999999998
Q ss_pred EcCC--CeEEEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 379 RTSD--TSVCFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 379 ~~~~--~~~C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+... +..|++ |... ++.||||++|||++|+|||++++|||||+++
T Consensus 287 ~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 287 QESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 7643 578986 7763 2679999999999999999999999999986
No 22
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.5e-56 Score=444.75 Aligned_cols=295 Identities=21% Similarity=0.319 Sum_probs=248.7
Q ss_pred eecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCC
Q 043437 81 IISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEE 160 (426)
Q Consensus 81 ~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~ 160 (426)
.+..+.+|+++|+||||+|++.|++||||+++||+|..|..+.|..++.|||++|+||+..+
T Consensus 133 ~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~------------------ 194 (453)
T 2bju_A 133 VDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDG------------------ 194 (453)
T ss_dssp EEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEE------------------
T ss_pred EecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECC------------------
Confidence 34578899999999999999999999999999999999984333678999999999999987
Q ss_pred CceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecC--CC-C-CCCCceeEeeCCCCCch---------
Q 043437 161 TCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDD--GT-F-NENATGIVGLGGGSVSL--------- 227 (426)
Q Consensus 161 ~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~--~~-~-~~~~~GilGLg~~~~sl--------- 227 (426)
|.|.+.|++|+. .|.+++|+|+||+. .++ +.|||++... +. | ....+||||||++..+.
T Consensus 195 -~~~~i~YgdGs~-~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~ 266 (453)
T 2bju_A 195 -TKVEMNYVSGTV-SGFFSKDLVTVGNL-----SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVE 266 (453)
T ss_dssp -EEEEEECSSSEE-EEEEEEEEEEETTE-----EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHH
T ss_pred -cEEEEEcCCCCe-EEEEEEEEEEEeCc-----EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHH
Confidence 899999999995 59999999999987 899 9999999986 53 3 56789999999986653
Q ss_pred -hhhcccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCC
Q 043437 228 -VTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEG 304 (426)
Q Consensus 228 -~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 304 (426)
.+| +.+..++||+||.+.+ . ..|.|+|||.+ ++.++ +.|+|+.. ..+|.|.++ |+||++ +. ...
T Consensus 267 L~~q-g~i~~~~FS~~L~~~~-~-~~G~l~fGg~D~~~y~G~-l~~~pv~~---~~~w~V~l~-I~Vgg~-~~----~~~ 333 (453)
T 2bju_A 267 LKNQ-NKIENALFTFYLPVHD-K-HTGFLTIGGIEERFYEGP-LTYEKLNH---DLYWQITLD-AHVGNI-ML----EKA 333 (453)
T ss_dssp HHHT-TSSSSCEEEEECCBTT-T-BCEEEEESSCCGGGEEEE-EEEEEEEE---ETTEEEEEE-EEETTE-EE----EEE
T ss_pred HHHC-CCCCCCEEEEEeCCCC-C-CCeEEEECCCCHHHcCCc-eEEEecCC---CceEEEEEE-EEECcE-Ee----ccc
Confidence 334 5577899999998853 3 58999999943 44444 99999986 679999999 999994 32 267
Q ss_pred cEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCC-CCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC-
Q 043437 305 NIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDP-EGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD- 382 (426)
Q Consensus 305 ~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~- 382 (426)
.+||||||+++++|++++++|.+++.+.. ...+ .+.+ +|+. ..+|+|+|+|+|++++||+++|+++...
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~~----~~~g~~~~v-~C~~----~~~P~itf~fgg~~~~l~~~~yi~~~~~~ 404 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVIK----VPFLPFYVT-LCNN----SKLPTFEFTSENGKYTLEPEYYLQHIEDV 404 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCEE----CTTSSCEEE-ETTC----TTCCCEEEECSSCEEEECHHHHEEECTTT
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCcc----cCCCceEEE-ecCC----CCCCcEEEEECCEEEEECHHHhEeecccC
Confidence 89999999999999999999988876531 1133 3434 5986 2689999999999999999999998753
Q ss_pred -CeEEEE-EEcCC---CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 383 -TSVCFT-FKGME---GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 383 -~~~C~~-i~~~~---~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
...|++ |.+.+ +.||||++|||++|+|||++++|||||+++
T Consensus 405 g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 405 GPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp STTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 468985 88764 489999999999999999999999999986
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.1e-55 Score=439.39 Aligned_cols=296 Identities=19% Similarity=0.263 Sum_probs=250.9
Q ss_pred cceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC--CcccCCCCCCCCCCCCccccccCCCcccCCcCCCC
Q 043437 78 QADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT--ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTS 155 (426)
Q Consensus 78 ~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~--~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~ 155 (426)
.++.+..+.+|+++|+||||||++.|++||||+++||+|..|. .| ..++.|||++|+|++..+
T Consensus 129 ~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~------------- 193 (451)
T 3qvc_A 129 VELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD------------- 193 (451)
T ss_dssp CCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-------------
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC-------------
Confidence 3344567889999999999999999999999999999999996 56 678999999999999887
Q ss_pred CCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEe----cCCCC-CCCCceeEeeCCCCCc----
Q 043437 156 CSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHN----DDGTF-NENATGIVGLGGGSVS---- 226 (426)
Q Consensus 156 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s---- 226 (426)
+.|.+.|++|+ +.|.+++|+|+||+. .++ +.||+++. ..+ | ....+||||||++..+
T Consensus 194 ------~~f~i~YgdGs-~~G~~~~Dtv~igg~-----~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~ 259 (451)
T 3qvc_A 194 ------TPVKLTSKAGT-ISGIFSKDLVTIGKL-----SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSI 259 (451)
T ss_dssp ------EEEEEECSSEE-EEEEEEEEEEEETTE-----EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCC
T ss_pred ------CEEEEEECCCE-EEEEEEEEEEEECCE-----EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCC
Confidence 89999999999 569999999999987 899 99999998 655 5 5678999999997654
Q ss_pred ------hhhhcccccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeee
Q 043437 227 ------LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHF 298 (426)
Q Consensus 227 ------l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 298 (426)
+.+| +.+.+++||+||.+... ..|.|+|||. +++.++ +.|+|+.. ..+|.|.++ |+||++ .
T Consensus 260 ~~~~~~L~~q-g~I~~~~FS~~L~~~~~--~~G~l~fGgiD~s~y~G~-l~~~pv~~---~~~w~v~l~-I~Vgg~-~-- 328 (451)
T 3qvc_A 260 DPYIVELKTQ-NKIEQAVYSIYLPPENK--NKGYLTIGGIEERFFDGP-LNYEKLNH---DLMWQVDLD-VHFGNV-S-- 328 (451)
T ss_dssp CCHHHHHHHT-TSSSSSEEEEECCTTCT--TEEEEEESSCCGGGEEEE-EEEEECSS---TTSSEEEEE-EEETTE-E--
T ss_pred CCHHHHHHHc-CCCCCCEEEEEEcCCCC--CCCEEEECCcchhhcCCc-eEEEEccc---CCeeEEEEE-EEECCc-c--
Confidence 3444 66789999999988633 4899999994 344444 99999985 789999999 999998 2
Q ss_pred cCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEE
Q 043437 299 DDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFI 378 (426)
Q Consensus 299 ~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~ 378 (426)
.....++|||||+++++|++++++|.+++.+.... ..+.+.+ +|. .. .+|+|+|+|+|.+++||+++|++
T Consensus 329 --~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~---~~g~y~v-~C~-~~---~~P~itf~fgg~~i~lp~~~yi~ 398 (451)
T 3qvc_A 329 --SKKANVILDSATSVITVPTEFFNQFVESASVFKVP---FLSLYVT-TCG-NT---KLPTLEYRSPNKVYTLEPKQYLE 398 (451)
T ss_dssp --EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT---TSSCEEE-ETT-CT---TCCCEEEEETTEEEEECHHHHEE
T ss_pred --CCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC---CCCeEEe-eCC-cC---cCCcEEEEECCEEEEEcHHHhee
Confidence 23788999999999999999999999888665432 1344444 498 32 78999999999999999999999
Q ss_pred EcC--CCeEEEE-EEcCC---CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 379 RTS--DTSVCFT-FKGME---GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 379 ~~~--~~~~C~~-i~~~~---~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+.. ++..|++ |.+.+ +.||||++|||++|+|||++++|||||+++
T Consensus 399 ~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 399 PLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred ecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 875 3468986 87764 579999999999999999999999999975
No 24
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.4e-55 Score=423.85 Aligned_cols=301 Identities=20% Similarity=0.298 Sum_probs=250.3
Q ss_pred cceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCC
Q 043437 78 QADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCS 157 (426)
Q Consensus 78 ~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 157 (426)
.......+.+|+++|+|| +|++.|+|||||+++||+|..|..|.++.++.|||++|+ ++...
T Consensus 6 ~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~--------------- 67 (325)
T 1ibq_A 6 VTTPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSA-TKLSG--------------- 67 (325)
T ss_dssp EEEECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSC-EECTT---------------
T ss_pred EeEEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcC-CccCC---------------
Confidence 333445788999999999 999999999999999999999999888889999999999 65443
Q ss_pred CCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC--CCCCceeEeeCCCCCc---------
Q 043437 158 TEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF--NENATGIVGLGGGSVS--------- 226 (426)
Q Consensus 158 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------- 226 (426)
|.|.+.|++|+.+.|.+++|+|+||+. .++++.|||++...+.+ ....+||||||++..+
T Consensus 68 ----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~ 138 (325)
T 1ibq_A 68 ----YSWDISYGDGSSASGDVYRDTVTVGGV-----TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTT 138 (325)
T ss_dssp ----CBEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCC
T ss_pred ----CEEEEEeCCCCEEEEEEEEeEEEECCE-----EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCC
Confidence 899999999996679999999999987 99999999999876644 3578999999997655
Q ss_pred hhhhcc-cccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCC
Q 043437 227 LVTQMG-SSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASE 303 (426)
Q Consensus 227 l~~ql~-~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 303 (426)
+++||. .+.+++||+||.+. ..|.|+|||. +++.++ +.|+|+... ..+|.|++++|+|+++.+. ...
T Consensus 139 ~~~~l~~~i~~~~FS~~l~~~----~~G~l~fGg~d~~~~~g~-l~~~p~~~~--~~~w~v~l~~i~v~~~~~~---~~~ 208 (325)
T 1ibq_A 139 FFDTVKSQLDSPLFAVQLKHD----APGVYDFGYIDDSKYTGS-ITYTDADSS--QGYWGFSTDGYSIGDGSSS---SSG 208 (325)
T ss_dssp HHHHHGGGSSSSEEEEEEETT----EEEEEEESSCCGGGBSSC-CEEEECBCT--TSSCEEEECEEEETTSCCB---SCC
T ss_pred HHHHHHHhcCCcEEEEEecCC----CCceEEECCcChhhccCc-eEEEEcCCC--CceEEEEECcEEECCeecc---CCC
Confidence 345553 35689999999862 4799999994 355555 999999853 6799999999999998764 346
Q ss_pred CcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcC--
Q 043437 304 GNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTS-- 381 (426)
Q Consensus 304 ~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~-- 381 (426)
..+||||||+++++|++++++|++++.+..... ..+.+.++ |+. .+|+|+|+|+|++++||+++|++...
T Consensus 209 ~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~~--~~g~~~~~-C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~ 280 (325)
T 1ibq_A 209 FSAIADTGTTLILLDDEIVSAYYEQVSGAQESY--EAGGYVFS-CST-----DLPDFTVVIGDYKAVVPGKYINYAPVST 280 (325)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTSTTCBCCS--SSSSCEEE-TTC-----CCCCEEEEETTEEEEECHHHHEEEESST
T ss_pred ceEEEeCCCCcEeCCHHHHHHHHHhCCCceEcC--cCCeEEEE-cCC-----CCCcEEEEECCEEEEECHHHhcccccCC
Confidence 799999999999999999999988874432111 12345454 983 67999999999999999999988753
Q ss_pred CCeEEEE-EEcCC--CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 382 DTSVCFT-FKGME--GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 382 ~~~~C~~-i~~~~--~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+...|++ |.+.+ +.||||++|||++|+|||++++|||||+++
T Consensus 281 ~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 281 GSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 2368998 77653 689999999999999999999999999974
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=9.4e-56 Score=425.75 Aligned_cols=297 Identities=17% Similarity=0.268 Sum_probs=250.7
Q ss_pred eeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC--CcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCC
Q 043437 80 DIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT--ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCS 157 (426)
Q Consensus 80 ~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~--~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~ 157 (426)
+.+..+.+|+++|+|| +|++.|+|||||+++||+|..|. .|.+..++.|||++| ||+..+
T Consensus 11 l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~--------------- 72 (330)
T 1yg9_A 11 VHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG--------------- 72 (330)
T ss_dssp EEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE---------------
T ss_pred eecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC---------------
Confidence 3455788999999999 99999999999999999999997 685567889999999 999876
Q ss_pred CCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC-CCCCceeEeeCCCCCc----------
Q 043437 158 TEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF-NENATGIVGLGGGSVS---------- 226 (426)
Q Consensus 158 ~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s---------- 226 (426)
+.|.+.|++|+. .|.+++|+|+||+. +++++.||+++.....| ....+||||||++..+
T Consensus 73 ----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 142 (330)
T 1yg9_A 73 ----NVQVKFFDTGSA-VGRGIEDSLTISQL-----TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLE 142 (330)
T ss_dssp ----EEEEEETTTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHH
T ss_pred ----CEEEEEECCceE-EEEEEEEEEEECCE-----EEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHH
Confidence 899999999988 59999999999987 99999999999884345 5678999999998776
Q ss_pred -hhhhcccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCC
Q 043437 227 -LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASE 303 (426)
Q Consensus 227 -l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ 303 (426)
+.+| +.+ .++||+||.+.......|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+. ...
T Consensus 143 ~l~~q-g~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~w~v~l~~i~v~~~~~~---~~~ 213 (330)
T 1yg9_A 143 NFVEE-NLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGE-FTYVPLVG---DDSWKFRLDGVKIGDTTVA---PAG 213 (330)
T ss_dssp HHHHT-TSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEE-EEEEEBSC---TTSCCEECSEEEETTEEEE---CTT
T ss_pred HHHhc-CCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCc-eEEEECCC---CCEEEEEeCeEEECCEEEc---CCC
Confidence 3344 557 89999999875221037999999943 44444 99999985 7799999999999998765 346
Q ss_pred CcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCC--CC-CccccccCCCCCCCCeEEEEEccceEEeCCCceEEEc
Q 043437 304 GNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDP--EG-VLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRT 380 (426)
Q Consensus 304 ~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~ 380 (426)
..+||||||+++++|++++++|++++.+.... .+ .+ .++ |+... .+|+|+|+|+|++++||+++|+++.
T Consensus 214 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~----~g~~~~~~~~-C~~~~---~~p~i~f~fgg~~~~l~~~~y~~~~ 285 (330)
T 1yg9_A 214 TQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK----TTTRRICKLD-CSKIP---SLPDVTFVINGRNFNISSQYYIQQN 285 (330)
T ss_dssp CEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE----CSSCEEEEEC-GGGGG---GSCCEEEEETTEEEEECHHHHEEEE
T ss_pred cEEEEecCCccccCCHHHHHHHHHHhCCcccC----CCceEEEEEE-CCCcc---ccCcEEEEECCEEEEECHHHhcccC
Confidence 89999999999999999999999999665321 22 33 455 98543 5899999999999999999999987
Q ss_pred CCCeEEEE-EEcC--CCcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 381 SDTSVCFT-FKGM--EGQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 381 ~~~~~C~~-i~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+..|++ |.+. ++.||||+.|||++|+|||++++|||||+++
T Consensus 286 --~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 286 --GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp --TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 458986 7753 3689999999999999999999999999975
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.3e-55 Score=423.55 Aligned_cols=301 Identities=20% Similarity=0.291 Sum_probs=249.9
Q ss_pred ccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCC
Q 043437 77 AQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSC 156 (426)
Q Consensus 77 ~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 156 (426)
+.......+.+|+++|+|| +|++.|+|||||+++||+|..|..|.++.++.|||++|+ ++...
T Consensus 6 v~~~~~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-------------- 68 (323)
T 1izd_A 6 VTTNPTSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSA-QKIDG-------------- 68 (323)
T ss_dssp EEEEECGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTC-EEEEE--------------
T ss_pred eeeeEcCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccC-CccCC--------------
Confidence 3333345788999999999 899999999999999999999998887889999999999 66544
Q ss_pred CCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC--CCCCceeEeeCCCCCch-------
Q 043437 157 STEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF--NENATGIVGLGGGSVSL------- 227 (426)
Q Consensus 157 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~sl------- 227 (426)
|.|.+.|++|+.+.|.+++|+|+|++. +++++.|||++...+.+ ....+||||||++.++.
T Consensus 69 -----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~ 138 (323)
T 1izd_A 69 -----ATWSISYGDGSSASGDVYKDKVTVGGV-----SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQK 138 (323)
T ss_dssp -----EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCC
T ss_pred -----CeEEEEcCCCCeEEEEEEEEEEEECCE-----EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCC
Confidence 899999999996679999999999987 99999999999876644 36789999999976653
Q ss_pred --hhhcc-cccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCC
Q 043437 228 --VTQMG-SSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDAS 302 (426)
Q Consensus 228 --~~ql~-~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 302 (426)
+++|. .+.+++||+||.+. ..|.|+|||. +++.++ +.|+|+... ..+|.|++++|+|++ .+. ..
T Consensus 139 ~~~~~l~~~i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~g~-l~~~p~~~~--~~~w~v~l~~i~v~~-~~~---~~ 207 (323)
T 1izd_A 139 TFFDNVKSSLSEPIFAVALKHN----APGVYDFGYTDSSKYTGS-ITYTDVDNS--QGFWGFTADGYSIGS-DSS---SD 207 (323)
T ss_dssp CHHHHHGGGSSSSEEEEECCTT----SCEEEEESSCCTTSEEEE-EEEEECBCT--TSSCEEEESEEEETT-EEE---CC
T ss_pred CHHHHHHHhccCcEEEEEccCC----CCCEEEECCcCccccccc-eEEEECCCC--CceEEEEECeEEECC-ccc---CC
Confidence 34432 35679999999862 4799999993 345444 999999843 679999999999999 554 45
Q ss_pred CCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC
Q 043437 303 EGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD 382 (426)
Q Consensus 303 ~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~ 382 (426)
...+||||||+++++|++++++|++++.+..... ..+.+.++ |+. .+|+|+|+|+|++++||+++|+++..+
T Consensus 208 ~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~~--~~g~~~~~-C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~ 279 (323)
T 1izd_A 208 SITGIADTGTTLLLLDDSIVDAYYEQVNGASYDS--SQGGYVFP-SSA-----SLPDFSVTIGDYTATVPGEYISFADVG 279 (323)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHTTSTTCEEET--TTTEEEEE-TTC-----CCCCEEEEETTEEEEECHHHHEEEECS
T ss_pred CceEEEeCCCcceeCCHHHHHHHHHhCCCcEEcC--cCCEEEEE-CCC-----CCceEEEEECCEEEecCHHHeEEecCC
Confidence 7799999999999999999999988875332111 12344455 982 689999999999999999999988755
Q ss_pred CeEEEE-EEcCC--CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 383 TSVCFT-FKGME--GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 383 ~~~C~~-i~~~~--~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+..|++ |.+.+ +.||||+.|||++|+|||++++|||||+++
T Consensus 280 ~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 280 NGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp TTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 678998 87653 689999999999999999999999999964
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.2e-55 Score=422.16 Aligned_cols=300 Identities=22% Similarity=0.341 Sum_probs=248.3
Q ss_pred ccceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCC
Q 043437 77 AQADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSC 156 (426)
Q Consensus 77 ~~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c 156 (426)
+.......+.+|+++|+|| +|++.|+|||||+++||+|.+|..|.++.++.|||++|+ ++...
T Consensus 6 v~~~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss-~~~~~-------------- 68 (323)
T 1bxo_A 6 ATNTPTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATG-KELSG-------------- 68 (323)
T ss_dssp EEEEECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHC-EEEEE--------------
T ss_pred eeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCC-cccCC--------------
Confidence 3444455788999999999 999999999999999999999998888889999999999 66554
Q ss_pred CCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCC--CCCCceeEeeCCCCCch-------
Q 043437 157 STEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTF--NENATGIVGLGGGSVSL------- 227 (426)
Q Consensus 157 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~sl------- 227 (426)
|.|.+.|++|+.+.|.+++|+|+||+. +++++.|||++...+.+ ....+||||||++..+.
T Consensus 69 -----~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 138 (323)
T 1bxo_A 69 -----YTWSISYGDGSSASGNVFTDSVTVGGV-----TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQT 138 (323)
T ss_dssp -----EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCC
T ss_pred -----CeEEEEeCCCCeEEEEEEEEEEEECCE-----EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCC
Confidence 899999999996679999999999987 99999999999876644 35789999999976553
Q ss_pred --hhhcc-cccCCeeEEeecCCCCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCC
Q 043437 228 --VTQMG-SSIGGKFSYCLVPFLSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDAS 302 (426)
Q Consensus 228 --~~ql~-~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 302 (426)
+++|. .+.+++||+||.+. ..|.|+|||. +++.++ +.|+|+... ..+|.|++++|+|++ .. ..
T Consensus 139 ~~~~~l~~~i~~~~FS~~L~~~----~~G~l~fGg~d~~~~~g~-l~~~p~~~~--~~~w~v~l~~i~v~~-~~----~~ 206 (323)
T 1bxo_A 139 TFFDTVKSSLAQPLFAVALKHQ----QPGVYDFGFIDSSKYTGS-LTYTGVDNS--QGFWSFNVDSYTAGS-QS----GD 206 (323)
T ss_dssp CHHHHHGGGBSSSEEEEECCSS----SCEEEEESSCCGGGBSSC-CEEEECBCT--TSSCEEEEEEEEETT-EE----EE
T ss_pred CHHHHHHHhcCCcEEEEEEeCC----CCceEEEeCcChhhccCc-eEEEECCCC--CCeEEEEEeeEEECC-cc----CC
Confidence 34432 35789999999762 4799999994 355555 999999853 679999999999998 32 23
Q ss_pred CCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC
Q 043437 303 EGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD 382 (426)
Q Consensus 303 ~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~ 382 (426)
...+||||||+++++|++++++|++++.+..... ..+.+.++ |+. .+|+|+|+|+|++++||+++|+++..+
T Consensus 207 ~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~~--~~g~~~~~-C~~-----~~P~i~f~fgg~~~~l~~~~~~~~~~~ 278 (323)
T 1bxo_A 207 GFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS--NAGGYVFD-CST-----NLPDFSVSISGYTATVPGSLINYGPSG 278 (323)
T ss_dssp EEEEEECTTCSSEEECHHHHHHHHTTSTTCEEET--TTTEEEEC-TTC-----CCCCEEEEETTEEEEECHHHHEEEECS
T ss_pred CceEEEeCCCCceeCCHHHHHHHHHhCCCceEcC--cCCEEEEE-CCC-----CCceEEEEECCEEEEECHHHeEEeccC
Confidence 6789999999999999999999988884432111 12344454 982 689999999999999999999887643
Q ss_pred -CeEEEE-EEcCC--CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 383 -TSVCFT-FKGME--GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 383 -~~~C~~-i~~~~--~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
...|++ |.+.+ +.||||+.|||++|+|||++++|||||+++
T Consensus 279 ~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 279 DGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 368998 87653 689999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.6e-54 Score=422.90 Aligned_cols=311 Identities=22% Similarity=0.349 Sum_probs=247.4
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCST 158 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~ 158 (426)
.+.+..+..|+++|+||||+|++.|+|||||+++||+|.+|..| ++.|||++|+||+..+
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~----~~~f~~~~SsT~~~~~---------------- 65 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI----DTYFDTERSSTYRSKG---------------- 65 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB----SCCCCGGGCTTCEEEE----------------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc----ccCcccccCccceeCC----------------
Confidence 33445567899999999999999999999999999999998766 5789999999999987
Q ss_pred CCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceec--eeeeeeeEecCCCC--CCCCceeEeeCCCCCc--------
Q 043437 159 EETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALR--NIIFGCGHNDDGTF--NENATGIVGLGGGSVS-------- 226 (426)
Q Consensus 159 ~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~--~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s-------- 226 (426)
|.|.+.|++|+. .|.+++|+|+|++. ... .+.|++.....+.| ....+||||||++.++
T Consensus 66 ---~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~ 136 (383)
T 2ewy_A 66 ---FDVTVKYTQGSW-TGFVGEDLVTIPKG-----FNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLET 136 (383)
T ss_dssp ---EEEEEECSSCEE-EEEEEEEEEEETTT-----EEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCC
T ss_pred ---ceEEEEECCcEE-EEEEEEEEEEECCC-----ccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccC
Confidence 899999999987 49999999999864 222 35688876655544 3578999999997653
Q ss_pred ----hhhhcccccCCeeEEeecCC------CCCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcce
Q 043437 227 ----LVTQMGSSIGGKFSYCLVPF------LSSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKK 294 (426)
Q Consensus 227 ----l~~ql~~~~~~~Fs~~l~~~------~~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~ 294 (426)
+++| +.+ .++||+||.+. ... ..|.|+|||. .++.++ +.|+|+.. ..+|.|.+++|+|+++
T Consensus 137 ~~~~l~~q-~~i-~~~FS~~l~~~~~~~~~~~~-~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~g~ 209 (383)
T 2ewy_A 137 FFDSLVTQ-ANI-PNVFSMQMCGAGLPVAGSGT-NGGSLVLGGIEPSLYKGD-IWYTPIKE---EWYYQIEILKLEIGGQ 209 (383)
T ss_dssp HHHHHHHH-HTC-CSCEEEEECCC----------CCEEEEETSCCGGGCCSC-EEEEECSS---BTTBBCCEEEEEETTE
T ss_pred HHHHHHHc-cCC-CcceEEEeeccccccccCCC-CCeEEEeCccchhhccCc-cEEEecCC---CceEEEEEEEEEECCE
Confidence 5566 445 78999999742 122 5799999994 345555 99999986 5799999999999999
Q ss_pred eeeecCC--CCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCC--CCccccccCCCC--CCCCeEEEEEccc-
Q 043437 295 KIHFDDA--SEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPE--GVLDLCYPYSSD--FKAPQITVHFSGA- 367 (426)
Q Consensus 295 ~~~~~~~--~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~--~~~P~l~f~f~g~- 367 (426)
.+..+.. ....+||||||+++++|++++++|++++.+.........+. ....+|+..... ..+|+|+|+|+|.
T Consensus 210 ~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~ 289 (383)
T 2ewy_A 210 SLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDEN 289 (383)
T ss_dssp ECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSS
T ss_pred EccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCC
Confidence 8765321 24689999999999999999999999998875432211111 113359865321 2589999999874
Q ss_pred -----eEEeCCCceEEEcC---CCeEEEE--EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCC
Q 043437 368 -----DVVLSPENTFIRTS---DTSVCFT--FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCS 425 (426)
Q Consensus 368 -----~~~l~~~~~~~~~~---~~~~C~~--i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~ 425 (426)
+++|++++|+++.. .+..|++ +.+.++.||||+.|||++|+|||++++|||||+++|.
T Consensus 290 ~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~ 357 (383)
T 2ewy_A 290 SSRSFRITILPQLYIQPMMGAGLNYECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCA 357 (383)
T ss_dssp TTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTC
T ss_pred CCceEEEEEChHHheeecccCCCCceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCC
Confidence 79999999998864 3568985 5555578999999999999999999999999999995
No 29
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.5e-54 Score=429.90 Aligned_cols=308 Identities=20% Similarity=0.347 Sum_probs=247.8
Q ss_pred cCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCCCc
Q 043437 83 SALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETC 162 (426)
Q Consensus 83 ~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~~ 162 (426)
..+..|+++|+||||+|+|.|+|||||+++||+|..| | ..++.|||++|+||+..+ |
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c--~~~~~y~~~~SsT~~~~~-------------------~ 127 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR-------------------K 127 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE-------------------E
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--c--ccCCcccCCCCCCcccCC-------------------c
Confidence 4566899999999999999999999999999999988 5 568899999999999987 9
Q ss_pred eeeeEeCCCCeeeeeEEEEEEEecCCCCCCceec-eeeeeeeEecCCCC--CCCCceeEeeCCCCCc------------h
Q 043437 163 EYSATYGDRSFSNGNLAVETVTLGSTNGRPAALR-NIIFGCGHNDDGTF--NENATGIVGLGGGSVS------------L 227 (426)
Q Consensus 163 ~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s------------l 227 (426)
.|.+.|++|+. .|.+++|+|+|++.. .+. .+.|+++......| ....+||||||++.++ |
T Consensus 128 ~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 128 GVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred cEEEEeCCeEE-EEEEEEEEEEECCCc----ceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 99999999998 599999999998521 222 36788888776655 3678999999997654 3
Q ss_pred hhhcccccCCeeEEeecCCC---------CCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceee
Q 043437 228 VTQMGSSIGGKFSYCLVPFL---------SSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKI 296 (426)
Q Consensus 228 ~~ql~~~~~~~Fs~~l~~~~---------~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~ 296 (426)
++| +.+. ++||+||.+.. .. ..|.|+|||. .++.++ +.|+|+.. ..+|.|.+++|+|+++.+
T Consensus 203 ~~q-~~i~-~~FS~~L~~~~~~~~~~~~~~~-~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~w~v~l~~i~v~g~~~ 275 (455)
T 3lpj_A 203 VKQ-THVP-NLFSLQLCGAGFPLNQSEVLAS-VGGSMIIGGIDHSLYTGS-LWYTPIRR---EWYYEVIIVRVEINGQDL 275 (455)
T ss_dssp HHH-SCCC-SCEEEEECCCSSCCCHHHHHHS-CCEEEEETSCCGGGEEEE-EEEEECCS---BTTBBCCEEEEEETTEEC
T ss_pred HHc-cCCC-ceeEEEeccccccccccccccC-CCceEEECCcCcccccCc-eEEEecCC---CceeEEEEeEEEECCEEc
Confidence 444 4454 89999997531 12 5799999994 344444 99999986 679999999999999987
Q ss_pred eecCC--CCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCC---CCCCccccccCCCC--CCCCeEEEEEccc--
Q 043437 297 HFDDA--SEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISD---PEGVLDLCYPYSSD--FKAPQITVHFSGA-- 367 (426)
Q Consensus 297 ~~~~~--~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~C~~~~~~--~~~P~l~f~f~g~-- 367 (426)
..+.. ....+||||||++++||++++++|++++.+........+ ..+ ..+|+..... ..+|+|+|+|+|.
T Consensus 276 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~-~~~C~~~~~~~~~~~P~i~f~f~g~~~ 354 (455)
T 3lpj_A 276 KMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGE-QLVCWQAGTTPWNIFPVISLYLMGEVT 354 (455)
T ss_dssp CCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTC-SCEEESTTCCCGGGSCCEEEEEECSST
T ss_pred cccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCc-ceecccccCCchhcCCcEEEEEcCCCc
Confidence 75321 256899999999999999999999999999864322211 112 3459976421 1389999999986
Q ss_pred ----eEEeCCCceEEEcCCC----eEEEE--EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 368 ----DVVLSPENTFIRTSDT----SVCFT--FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 368 ----~~~l~~~~~~~~~~~~----~~C~~--i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
+++|++++|+++..+. ..|++ +.+.++.||||+.|||++|+|||++++|||||+++|++
T Consensus 355 ~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 355 NQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp TEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred CceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 4999999999987542 58986 44445789999999999999999999999999999964
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1.2e-53 Score=421.30 Aligned_cols=308 Identities=20% Similarity=0.356 Sum_probs=245.5
Q ss_pred ecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCCC
Q 043437 82 ISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEET 161 (426)
Q Consensus 82 ~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~ 161 (426)
...+..|+++|+||||+|++.|+|||||+++||+|..|..| ++.|||++|+||+..+
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~----~~~y~~~~SsT~~~~~------------------- 73 (395)
T 2qp8_A 17 GKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL----HRYYQRQLSSTYRDLR------------------- 73 (395)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC----SCCCCGGGCTTCEEEE-------------------
T ss_pred CCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc----cCCcCcccCCCceeCC-------------------
Confidence 34577899999999999999999999999999999988655 6789999999999987
Q ss_pred ceeeeEeCCCCeeeeeEEEEEEEec-CCCCCCceec-eeeeeeeEecCCCC--CCCCceeEeeCCCCCc-----------
Q 043437 162 CEYSATYGDRSFSNGNLAVETVTLG-STNGRPAALR-NIIFGCGHNDDGTF--NENATGIVGLGGGSVS----------- 226 (426)
Q Consensus 162 ~~~~~~Y~~g~~~~G~~~~D~v~ig-~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s----------- 226 (426)
|.|.+.|++|+. .|.+++|+|+|+ +. .++ .+.|++.......| ....+||||||++.++
T Consensus 74 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~-----~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 147 (395)
T 2qp8_A 74 KGVYVPYTQGKW-EGELGTDLVSIPHGP-----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFD 147 (395)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC-----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred ceEEEEECCcEE-EEEEEeEEEEECCCC-----CceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHH
Confidence 899999999987 599999999998 33 333 36688777655544 3578999999997653
Q ss_pred -hhhhcccccCCeeEEeecCCC---------CCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcce
Q 043437 227 -LVTQMGSSIGGKFSYCLVPFL---------SSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKK 294 (426)
Q Consensus 227 -l~~ql~~~~~~~Fs~~l~~~~---------~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~ 294 (426)
|++| +.+. ++||+||.+.. .. ..|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++
T Consensus 148 ~l~~q-~~i~-~~FS~~L~~~~~~~~~~~~~~~-~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~g~ 220 (395)
T 2qp8_A 148 SLVKQ-THVP-NLFSLQLCGAGFPLNQSEVLAS-VGGSMIIGGIDHSLYTGS-LWYTPIRR---EWYYEVIIVRVEINGQ 220 (395)
T ss_dssp HHHHH-SCCC-SCEEEEECCCSSCCCHHHHHHS-CCEEEEETSCCGGGEEEE-EEEEECCS---BTTBBCCEEEEEETTE
T ss_pred HHHHc-cCCc-ceEEEEeccccccccccccccC-CCcEEEECCcCcccccCc-eEEeccCC---CceEEEEEEEEEECCE
Confidence 4455 4454 89999997531 12 47999999943 44444 99999986 5799999999999999
Q ss_pred eeeecCC--CCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCC---CCCccccccCCCC--CCCCeEEEEEccc
Q 043437 295 KIHFDDA--SEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDP---EGVLDLCYPYSSD--FKAPQITVHFSGA 367 (426)
Q Consensus 295 ~~~~~~~--~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~--~~~P~l~f~f~g~ 367 (426)
.+.++.. ....+||||||+++++|++++++|++++.+.........+ .+.+ +|+..... ..+|+|+|+|+|.
T Consensus 221 ~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~C~~~~~~~~~~~P~i~f~f~g~ 299 (395)
T 2qp8_A 221 DLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQL-VCWQAGTTPWNIFPVISLYLMGE 299 (395)
T ss_dssp ECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSC-EEESTTCCCGGGSCCEEEEEECS
T ss_pred EcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccc-cccccccchHhhCCcEEEEEccC
Confidence 8765321 2468999999999999999999999999887643221111 1223 49875321 2589999999875
Q ss_pred ------eEEeCCCceEEEcCC----CeEEEE--EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 368 ------DVVLSPENTFIRTSD----TSVCFT--FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 368 ------~~~l~~~~~~~~~~~----~~~C~~--i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
+++|++++|+++..+ ...|++ +.+.++.||||+.|||++|+|||++++|||||+++|.+
T Consensus 300 ~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 300 VTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp STTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred CCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 699999999998643 348974 66555789999999999999999999999999999973
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.3e-53 Score=419.28 Aligned_cols=308 Identities=20% Similarity=0.336 Sum_probs=244.5
Q ss_pred CCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCCCCCce
Q 043437 84 ALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCSTEETCE 163 (426)
Q Consensus 84 ~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~~~~~~ 163 (426)
.+..|+++|+||||+|++.|+|||||+++||+|.+| | ..++.|+|++|+||+..+ |.
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~--~~~~~y~~~~SsT~~~~~-------------------~~ 82 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--P--FLHRYYQRQLSSTYRDLR-------------------KG 82 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--T--TCSCCCCGGGCTTCEEEE-------------------EE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--C--cccCCcCcccCcccccCC-------------------CE
Confidence 456799999999999999999999999999999988 5 567899999999999987 99
Q ss_pred eeeEeCCCCeeeeeEEEEEEEecCCCCCCceece-eeeeeeEecCCCC--CCCCceeEeeCCCCCc------------hh
Q 043437 164 YSATYGDRSFSNGNLAVETVTLGSTNGRPAALRN-IIFGCGHNDDGTF--NENATGIVGLGGGSVS------------LV 228 (426)
Q Consensus 164 ~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~-~~fg~~~~~~~~~--~~~~~GilGLg~~~~s------------l~ 228 (426)
|.+.|++|+. .|.+++|+|+|++.. .+.. +.|+++......| ....+||||||++..+ |+
T Consensus 83 ~~i~Yg~Gs~-~G~~~~D~v~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~ 157 (402)
T 3vf3_A 83 VYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLV 157 (402)
T ss_dssp EEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHH
T ss_pred EEEEECcEEE-EEEEEEEEEEECCcc----ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHH
Confidence 9999999997 599999999998521 3333 4578777766544 4578999999997654 33
Q ss_pred hhcccccCCeeEEeecCCC---------CCCCcceEEeCCC--CccCCCceEEeecccCCCCceEEEEEEEEEEcceeee
Q 043437 229 TQMGSSIGGKFSYCLVPFL---------SSESSSKINFGSN--GVVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIH 297 (426)
Q Consensus 229 ~ql~~~~~~~Fs~~l~~~~---------~~~~~G~l~~Gg~--~~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~ 297 (426)
+| +.+. ++||+||.+.. .. ..|.|+|||. .++.++ +.|+|+.. ..+|.|.+++|+|+++.+.
T Consensus 158 ~q-~~i~-~~FS~~l~~~~~~~~~~~~~~~-~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~w~v~l~~i~v~g~~~~ 230 (402)
T 3vf3_A 158 KQ-THVP-NLFSLQLCGAGFPLNQSEVLAS-VGGSMIIGGIDHSLYTGS-LWYTPIRR---EWYYEVIIVRVEINGQDLK 230 (402)
T ss_dssp HH-SCCC-SCEEEEECCCC--------------EEEEESSCCGGGEEEE-EEEEECSS---BTTBEECEEEEEETTEECC
T ss_pred Hc-cCCc-cceEEEeecccccccccccccC-CCCEEEeCCcCcccccCc-eEEEeCCc---CcEEEEEEeEEEECCEEec
Confidence 44 4454 89999997531 12 5799999993 344444 99999986 6799999999999999877
Q ss_pred ecCC--CCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCC--CccccccCCCC--CCCCeEEEEEccc----
Q 043437 298 FDDA--SEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEG--VLDLCYPYSSD--FKAPQITVHFSGA---- 367 (426)
Q Consensus 298 ~~~~--~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~C~~~~~~--~~~P~l~f~f~g~---- 367 (426)
.+.. ....+||||||+++++|++++++|++++.+...........+ ...+|+..... ..+|+|+|+|+|.
T Consensus 231 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~ 310 (402)
T 3vf3_A 231 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQ 310 (402)
T ss_dssp CCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTE
T ss_pred ccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCc
Confidence 5321 256899999999999999999999999999864322222221 13459976321 1589999999985
Q ss_pred --eEEeCCCceEEEcCCC----eEEEE--EEcCCCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 368 --DVVLSPENTFIRTSDT----SVCFT--FKGMEGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 368 --~~~l~~~~~~~~~~~~----~~C~~--i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
+++|++++|+++..+. ..|++ +.+.++.||||++|||++|+|||++++|||||+++|++
T Consensus 311 ~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 311 SFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp EEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred eEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 4999999999987542 48986 44445789999999999999999999999999999984
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6e-53 Score=408.30 Aligned_cols=296 Identities=24% Similarity=0.396 Sum_probs=238.5
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcCCCCCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERTSCST 158 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~~c~~ 158 (426)
.++.+.+.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+++. .
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~----------~~y~~s~Ss~~~--~---------------- 56 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTSSAT--S---------------- 56 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS----------SCCCCCTTCEEE--E----------------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC----------CccCCcCCcccc--C----------------
Confidence 455556789999999999999999999999999999764 469998887643 2
Q ss_pred CCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCCCCCCCCceeEeeCCCCCch-----------
Q 043437 159 EETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDGTFNENATGIVGLGGGSVSL----------- 227 (426)
Q Consensus 159 ~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~sl----------- 227 (426)
|.|.+.|++|+. .|.+++|+|+||+. +++++.|||++...+ | ...+||||||++..++
T Consensus 57 ---~~~~i~Yg~Gs~-~G~~~~Dtv~~g~~-----~v~~~~fg~~~~~~~-~-~~~~GilGLg~~~~s~~~~~~~~~~~~ 125 (340)
T 1wkr_A 57 ---DKVSVTYGSGSF-SGTEYTDTVTLGSL-----TIPKQSIGVASRDSG-F-DGVDGILGVGPVDLTVGTLSPHTSTSI 125 (340)
T ss_dssp ---EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEEES-C-TTCSEEEECSCGGGGTTSEESCTTCCC
T ss_pred ---ceEEEEECCcEE-EEEEEEEEEEECCE-----EEcceEEEEEEccCC-C-cCCCcEEECCccccccccccccccccC
Confidence 899999999985 59999999999987 999999999998755 5 4689999999976543
Q ss_pred ---hhhc---ccccCCeeEEeecCCCCCC-CcceEEeCCCC--ccCCCceEEeecccCCC-CceEEEEEEEEEEcc-eee
Q 043437 228 ---VTQM---GSSIGGKFSYCLVPFLSSE-SSSKINFGSNG--VVSGTGVVTTPLVAKDP-DTFYFLTLESISVGK-KKI 296 (426)
Q Consensus 228 ---~~ql---~~~~~~~Fs~~l~~~~~~~-~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~-~~~w~v~l~~i~v~~-~~~ 296 (426)
+.+| +.+.+++||+||.+..... ..|.|+|||.+ ++.++ +.|+|+...+. ..+|.|. ++|+|++ +.+
T Consensus 126 ~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l 203 (340)
T 1wkr_A 126 PTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGS-ITYTPITSTSPASAYWGIN-QSIRYGSSTSI 203 (340)
T ss_dssp CCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSC-CEEEECCSSTTGGGSSEEE-EEEEETTTEEE
T ss_pred CCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccc-eEEEECccCCCCcceEEEE-eeEEECCCeEc
Confidence 2222 5567899999998642211 57999999943 45555 99999997543 6799999 9999998 777
Q ss_pred eecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCCCCCCCccccccCCCCCCCCeEEEEEccceEEeCCCce
Q 043437 297 HFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPISDPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENT 376 (426)
Q Consensus 297 ~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~ 376 (426)
.. ...+||||||++++||++++++|.+++.+..... .+.+.+ +|.... .+|+|+|+|+|.+++|++++|
T Consensus 204 ~~----~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~---~g~~~~-~C~~~~---~~p~i~f~f~g~~~~i~~~~y 272 (340)
T 1wkr_A 204 LS----STAGIVDTGTTLTLIASDAFAKYKKATGAVADNN---TGLLRL-TTAQYA---NLQSLFFTIGGQTFELTANAQ 272 (340)
T ss_dssp EE----EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTT---TSSEEE-CHHHHH---TCCCEEEEETTEEEEECTGGG
T ss_pred cC----CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCC---CCeEEe-eccccc---cCCcEEEEECCEEEEEcHHHh
Confidence 54 4689999999999999999999988887654321 233434 497532 679999999999999999999
Q ss_pred EEEcC-------CCeEEEE-EEcC------CCcceechhhhccEEEEEECCCCEEEEeeCCCCC
Q 043437 377 FIRTS-------DTSVCFT-FKGM------EGQSIYGNLAQANFLVGYDTKAKTVSFKPTDCSK 426 (426)
Q Consensus 377 ~~~~~-------~~~~C~~-i~~~------~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 426 (426)
+++.. ....|+. |.+. +..||||+.|||++|+|||++++|||||+++|++
T Consensus 273 i~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 273 IWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp BCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred ccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 98653 1245754 6642 1369999999999999999999999999999974
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=5.8e-53 Score=414.21 Aligned_cols=315 Identities=20% Similarity=0.445 Sum_probs=244.2
Q ss_pred ecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCCCcccCCCCCCCCCCCCccccccCCCcccCCcC---CCCCCC
Q 043437 82 ISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCTECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYE---RTSCST 158 (426)
Q Consensus 82 ~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~---~~~c~~ 158 (426)
+..+.+|+++|+|||| |+|||||+++||+|.+|. +++.+.|+++.|.... ...|..
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~----------------~~~~~~C~s~~C~~~~~~~~~sc~~ 68 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ----------------PPAEIPCSSPTCLLANAYPAPGCPA 68 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC----------------CCCCCBTTSHHHHHHHSSCCTTCCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC----------------CCCccCCCCchhccccCCCCCCCCC
Confidence 4568899999999998 999999999999987541 2455667777775432 124542
Q ss_pred --------CCCc-eeeeEeCCCCeeeeeEEEEEEEecCCCCCCceecee----eeeeeEecCC-CCCCCCceeEeeCCCC
Q 043437 159 --------EETC-EYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNI----IFGCGHNDDG-TFNENATGIVGLGGGS 224 (426)
Q Consensus 159 --------~~~~-~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~----~fg~~~~~~~-~~~~~~~GilGLg~~~ 224 (426)
++.| .|.+.|++|+.+.|++++|+|+|++.++ .+.++++ .|||+..... .+....+||||||++.
T Consensus 69 ~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g-~~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~~~ 147 (381)
T 1t6e_X 69 PSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDG-SKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSG 147 (381)
T ss_dssp CCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESS-SSEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSSST
T ss_pred ccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCC-CccccceeeeeEeecCcccccCCCCCCCceEEEeCCCc
Confidence 2346 5999999999877999999999986322 1266665 5699987632 2346889999999999
Q ss_pred Cchhhhccc--ccCCeeEEeecCCCCCCCcceEEeCCCCc----cCCCceEEeecccCCCCceEEEEEEEEEEcceeeee
Q 043437 225 VSLVTQMGS--SIGGKFSYCLVPFLSSESSSKINFGSNGV----VSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHF 298 (426)
Q Consensus 225 ~sl~~ql~~--~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~~----~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~ 298 (426)
++++.|+.. +..++||+||.+. ..|+|+|||.+. +.++ +.|+|++.++...+|+|.|++|+||++.+..
T Consensus 148 ~s~~~ql~~~~~~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~-l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~ 222 (381)
T 1t6e_X 148 LALPAQVASAQKVANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQS-MPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222 (381)
T ss_dssp TSHHHHHHHHHTCCSEEEEECCSS----SCEEEEESCCSCSCHHHHTT-CCEEECBCCTTCCSCEECEEEEEETTEECCC
T ss_pred chhHHHHhhhcccCceEEEEeCCC----CCeeEEeCCcccccccccCc-ceeeccccCCCCcceEEEEEEEEEcCEEecC
Confidence 999988764 3579999999864 379999999543 4454 9999999764345677999999999988765
Q ss_pred cCC--CCCcEEEccCCccccCcHHHHHHHHHHHHhhccC--------CCCCCCCCCccccccCCCC------CCCCeEEE
Q 043437 299 DDA--SEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKA--------DPISDPEGVLDLCYPYSSD------FKAPQITV 362 (426)
Q Consensus 299 ~~~--~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~--------~~~~~~~~~~~~C~~~~~~------~~~P~l~f 362 (426)
+.. ..+.+||||||++++||++++++|.+++.+++.. .+.......++.|+..... ..+|+|+|
T Consensus 223 ~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f 302 (381)
T 1t6e_X 223 PEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQL 302 (381)
T ss_dssp CTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEE
T ss_pred CHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEE
Confidence 321 1467999999999999999999999999887641 1110122234569875421 26899999
Q ss_pred EEcc-ceEEeCCCceEEEcCCCeEEEEEEcCC---------CcceechhhhccEEEEEECCCCEEEEeeCC
Q 043437 363 HFSG-ADVVLSPENTFIRTSDTSVCFTFKGME---------GQSIYGNLAQANFLVGYDTKAKTVSFKPTD 423 (426)
Q Consensus 363 ~f~g-~~~~l~~~~~~~~~~~~~~C~~i~~~~---------~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 423 (426)
+|+| ++++|++++|+++..++..|++|+..+ +.||||+.|||++|+|||++++|||||+++
T Consensus 303 ~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 303 GLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp EETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred EECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 9985 999999999999876677899987653 479999999999999999999999999854
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-43 Score=323.62 Aligned_cols=221 Identities=27% Similarity=0.446 Sum_probs=187.4
Q ss_pred cceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC---CcccCCCCCCCCCCCCccccccCCCcccCCcCCC
Q 043437 78 QADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT---ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERT 154 (426)
Q Consensus 78 ~~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~---~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 154 (426)
.++.+..+.+|+++|.||||+|++.|+|||||+++||+|..|. .| ..++.|||++|+||+..+
T Consensus 5 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~------------ 70 (239)
T 1b5f_A 5 VALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKAC--RAHSMYESSDSSTYKENG------------ 70 (239)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCccc--CCCCCCCCccCCCeeeCC------------
Confidence 3445667899999999999999999999999999999999997 57 457899999999999887
Q ss_pred CCCCCCCceeeeEeCCCCeeeeeEEEEEEEecCCCCCCceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCc------
Q 043437 155 SCSTEETCEYSATYGDRSFSNGNLAVETVTLGSTNGRPAALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVS------ 226 (426)
Q Consensus 155 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------ 226 (426)
|.|.+.|++|+. .|.+++|+|+|++. .++++.||++....+ .| ....+||||||++..+
T Consensus 71 -------~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~ 137 (239)
T 1b5f_A 71 -------TFGAIIYGTGSI-TGFFSQDSVTIGDL-----VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYN 137 (239)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHH
T ss_pred -------cEEEEEECCCcE-EEEEEEEEEEECCc-----EEccEEEEEEEeccCccccccCcceEEecCccccccHHHHH
Confidence 899999999986 59999999999987 999999999998755 34 5678999999999887
Q ss_pred hhhhcccccCCeeEEeecCCCCCCCcceEEeCCCC--ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCC
Q 043437 227 LVTQMGSSIGGKFSYCLVPFLSSESSSKINFGSNG--VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEG 304 (426)
Q Consensus 227 l~~ql~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~--~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~ 304 (426)
+++| +.+..++||+||.+.......|.|+|||.+ ++.++ +.|+|+.. ..+|.|.+++|+|+++.+... ....
T Consensus 138 l~~q-g~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~~-~~~~ 211 (239)
T 1b5f_A 138 MLNQ-GLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGD-HTYVPVTY---QYYWQFGIGDVLIGDKSTGFC-APGC 211 (239)
T ss_dssp HHHT-TCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEE-EEEEEEEE---ETTEEEEECCEEETTEECCTT-TTCE
T ss_pred HHHC-CCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCc-eEEEEccc---CCeEEEEeeEEEECCEEeccc-CCCC
Confidence 4455 667889999999875321157999999943 44444 99999986 579999999999999876542 3467
Q ss_pred cEEEccCCccccCcHHHHHHHHHHHHh
Q 043437 305 NIIIDSGTTLTFLPPDIVSKLTSAVSD 331 (426)
Q Consensus 305 ~~iiDTGt~~~~lp~~~~~~i~~~~~~ 331 (426)
.+||||||+++++|++++++|.+++++
T Consensus 212 ~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 212 QAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp EEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred EEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 899999999999999999999888753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.8e-37 Score=284.08 Aligned_cols=217 Identities=22% Similarity=0.383 Sum_probs=175.8
Q ss_pred ceeceeeeeeeEecCC-CC-CCCCceeEeeCCCCCch------hhhc---ccccCCeeEEeecCCCCCCCcceEEeCCCC
Q 043437 193 AALRNIIFGCGHNDDG-TF-NENATGIVGLGGGSVSL------VTQM---GSSIGGKFSYCLVPFLSSESSSKINFGSNG 261 (426)
Q Consensus 193 ~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~sl------~~ql---~~~~~~~Fs~~l~~~~~~~~~G~l~~Gg~~ 261 (426)
+++++|.|||++...+ .| ....+||||||++..+. ++|| +.+.+++||+||.+.......|.|+|||.+
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 4899999999999876 45 56899999999987652 2332 557889999999875322137999999943
Q ss_pred --ccCCCceEEeecccCCCCceEEEEEEEEEEcceeeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCCCCC
Q 043437 262 --VVSGTGVVTTPLVAKDPDTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKADPIS 339 (426)
Q Consensus 262 --~~~~~~~~~~p~~~~~~~~~w~v~l~~i~v~~~~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~~~~ 339 (426)
++.++ +.|+|+.. ..+|.|.+++|+|+++.+.. .....+|+||||+++++|++++++|.+++.+....
T Consensus 83 ~~~~~g~-l~~~p~~~---~~~~~v~l~~i~v~~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~---- 152 (241)
T 1lya_B 83 SKYYKGS-LSYLNVTR---KAYWQVHLDQVEVASGLTLC--KEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI---- 152 (241)
T ss_dssp GGGEEEE-EEEEECSS---BTTBEEEEEEEEETTSCEES--TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE----
T ss_pred HHHcCCc-eEEEECcc---ccEEEEEEeEEEECCeeEec--cCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc----
Confidence 44444 99999986 67999999999999987532 45678999999999999999999999998765321
Q ss_pred CCCCCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC--CeEEEE-EEcC------CCcceechhhhccEEEEE
Q 043437 340 DPEGVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD--TSVCFT-FKGM------EGQSIYGNLAQANFLVGY 410 (426)
Q Consensus 340 ~~~~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~------~~~~ilG~~fl~~~y~vf 410 (426)
.+.+.++ |+... .+|+|+|+|+|++++|++++|+++... +..|++ |.+. ++.||||++|||++|+||
T Consensus 153 ~g~~~~~-C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vf 228 (241)
T 1lya_B 153 QGEYMIP-CEKVS---TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVF 228 (241)
T ss_dssp TTEEEEE-GGGGG---GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEE
T ss_pred CCcEEEE-CCCCc---cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEE
Confidence 3344454 98653 689999999999999999999998753 468986 8764 368999999999999999
Q ss_pred ECCCCEEEEeeCC
Q 043437 411 DTKAKTVSFKPTD 423 (426)
Q Consensus 411 D~~~~~igfa~~~ 423 (426)
|++++|||||+++
T Consensus 229 D~~~~~igfA~~~ 241 (241)
T 1lya_B 229 DRDNNRVGFAEAA 241 (241)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCEEEEEEcC
Confidence 9999999999975
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=7.2e-24 Score=164.71 Aligned_cols=87 Identities=29% Similarity=0.486 Sum_probs=79.2
Q ss_pred ceeecCCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCCCCC----CcccCCCCCCCCCCCCccccccCCCcccCCcCCC
Q 043437 79 ADIISALGEYVMNISIGTPPVEILAIADTGSDLIWTQCKPCT----ECYKQAAPFFDPEQSSTYKDLSCDSRQCTAYERT 154 (426)
Q Consensus 79 ~~~~~~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~C~----~C~~~~~~~y~~~~SsT~~~~~c~~~~C~~~~~~ 154 (426)
++.+..+.+|+++|.||||+|+|.|+|||||+++||+|..|. .| ..++.|||++|+|++...
T Consensus 6 ~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C--~~~~~y~p~~SsT~~~~~------------ 71 (97)
T 1lya_A 6 VLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIAC--WIHHKYNSDKSSTYVKNG------------ 71 (97)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHH--HTSCCBCGGGCTTCEEEE------------
T ss_pred eeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCccccc--CCCCCCCchhCCCceeCC------------
Confidence 344568899999999999999999999999999999999997 68 457899999999999987
Q ss_pred CCCCCCCceeeeEeCCCCeeeeeEEEEEEEecC
Q 043437 155 SCSTEETCEYSATYGDRSFSNGNLAVETVTLGS 187 (426)
Q Consensus 155 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~ig~ 187 (426)
|.|.+.|++|+. .|.+++|+|+|++
T Consensus 72 -------~~~~i~Yg~Gs~-~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -------TSFDIHYGSGSL-SGYLSQDTVSVPC 96 (97)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEESC
T ss_pred -------CcEEEEECCcEE-EEEEEEEEEEECC
Confidence 999999999995 5999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.70 E-value=2.3e-17 Score=125.82 Aligned_cols=77 Identities=21% Similarity=0.413 Sum_probs=65.4
Q ss_pred CCccccccCCCCCCCCeEEEEEccceEEeCCCceEEEcCC--CeEEEE-EEcC-----CCcceechhhhccEEEEEECCC
Q 043437 343 GVLDLCYPYSSDFKAPQITVHFSGADVVLSPENTFIRTSD--TSVCFT-FKGM-----EGQSIYGNLAQANFLVGYDTKA 414 (426)
Q Consensus 343 ~~~~~C~~~~~~~~~P~l~f~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~-----~~~~ilG~~fl~~~y~vfD~~~ 414 (426)
|.++ |.... ++|+|+|+|+|++++|++++|+++... ...|++ |++. ++.||||+.|||++|+|||+++
T Consensus 3 y~v~-C~~~~---~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~ 78 (87)
T 1b5f_B 3 LQVD-CNTLS---SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGN 78 (87)
T ss_dssp CEEC-GGGGG---GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTT
T ss_pred EEEE-CCCCC---cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCC
Confidence 4455 98643 689999999999999999999998653 368987 8763 3579999999999999999999
Q ss_pred CEEEEeeCC
Q 043437 415 KTVSFKPTD 423 (426)
Q Consensus 415 ~~igfa~~~ 423 (426)
+|||||+++
T Consensus 79 ~riGfA~~~ 87 (87)
T 1b5f_B 79 LLVGFAEAA 87 (87)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEcC
Confidence 999999974
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.98 E-value=0.12 Score=42.37 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=57.6
Q ss_pred EEEcceeeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhcc-CCCCC---CCCCCccccccCCCCCCCCeEEEEE
Q 043437 289 ISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIK-ADPIS---DPEGVLDLCYPYSSDFKAPQITVHF 364 (426)
Q Consensus 289 i~v~~~~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~-~~~~~---~~~~~~~~C~~~~~~~~~P~l~f~f 364 (426)
+.|||+.+. +++|||.+.+.++.+..+++ +-... ..... .+..... +. .......+.+
T Consensus 31 v~InG~~~~--------~LvDTGAs~s~is~~~a~~l----gl~~~~~~~~~~~a~g~g~~~-~~-----~~~~~~~i~i 92 (148)
T 2i1a_A 31 IEINNYPVK--------AFVDTGAQTTIMSTRLAKKT----GLSRMIDKRFIGEARGVGTGK-II-----GRIHQAQVKI 92 (148)
T ss_dssp EEETTEEEE--------EEECTTCSSCEEEHHHHHHH----TGGGGCBCCCC------------C-----EEEEEEEEEE
T ss_pred EEECCEEEE--------EEEECCCCccccCHHHHHHc----CCCccCCcceEEEEecCCCcc-cc-----cEEEEEEEEE
Confidence 567887554 69999999999998887765 22111 01100 0000000 10 0112335555
Q ss_pred ccceEEeCCCceEEEcCCCeEEEEEEcCCCcceechhhhccEEEEEECCCCEEEEe
Q 043437 365 SGADVVLSPENTFIRTSDTSVCFTFKGMEGQSIYGNLAQANFLVGYDTKAKTVSFK 420 (426)
Q Consensus 365 ~g~~~~l~~~~~~~~~~~~~~C~~i~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa 420 (426)
++..+.++ +.+.+.+...|||..||+++-+..|+.+++|-|.
T Consensus 93 g~~~~~~~--------------~~vl~~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 93 ETQYIPCS--------------FTVLDTDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp TTEEEEEE--------------EEEECSSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCEEecee--------------EEEecCCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 55432211 1122222458999999999999999999999885
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=92.41 E-value=0.13 Score=42.13 Aligned_cols=102 Identities=12% Similarity=0.176 Sum_probs=58.6
Q ss_pred EEEcceeeeecCCCCCcEEEccCCccccCcHHHHHHHHHHHHhhccCC--CCCCCCCCccccccCCCCCCCCeEEEEEcc
Q 043437 289 ISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIVSKLTSAVSDLIKAD--PISDPEGVLDLCYPYSSDFKAPQITVHFSG 366 (426)
Q Consensus 289 i~v~~~~~~~~~~~~~~~iiDTGt~~~~lp~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~C~~~~~~~~~P~l~f~f~g 366 (426)
+.||++.+. +++|||.+.+.++.+..+++- +....... ....+..... +.. ..+...+.+++
T Consensus 29 ~~Ing~~v~--------~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~g~G~~~-~~g-----~v~~~~I~Ig~ 92 (148)
T 3s8i_A 29 CKVNGHPLK--------AFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAKGVGTQR-IIG-----RVHLAQIQIEG 92 (148)
T ss_dssp EEETTEEEE--------EEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECCC---CE-EEE-----EEEEEEEEETT
T ss_pred EEECCEEEE--------EEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEEcCCccE-EEE-----EEEEEEEEECC
Confidence 347877554 699999999999999888761 11100000 0000000000 100 12233444444
Q ss_pred ceEEeCCCceEEEcCCCeEEEE-EEcCC-CcceechhhhccEEEEEECCCCEEEEee
Q 043437 367 ADVVLSPENTFIRTSDTSVCFT-FKGME-GQSIYGNLAQANFLVGYDTKAKTVSFKP 421 (426)
Q Consensus 367 ~~~~l~~~~~~~~~~~~~~C~~-i~~~~-~~~ilG~~fl~~~y~vfD~~~~~igfa~ 421 (426)
..+ .|-+ +.+.. -..|||..||+.+-.+.|++++++-|..
T Consensus 93 ~~~---------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 93 DFL---------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGT 134 (148)
T ss_dssp EEE---------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTT
T ss_pred EEE---------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEcc
Confidence 321 2322 33332 4589999999999999999999998865
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=88.41 E-value=0.57 Score=35.30 Aligned_cols=28 Identities=29% Similarity=0.265 Sum_probs=24.4
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeeeCCC
Q 043437 89 VMNISIGTPPVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 89 ~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
++.|.|| +|.+.+++|||.+++-+....
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5779999 899999999999999996543
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=87.88 E-value=0.52 Score=35.93 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=23.9
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceeeeC
Q 043437 88 YVMNISIGTPPVEILAIADTGSDLIWTQC 116 (426)
Q Consensus 88 Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~ 116 (426)
-++.|.|| +|.+.+++|||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 35789999 8999999999999999973
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=86.26 E-value=0.9 Score=34.15 Aligned_cols=27 Identities=22% Similarity=0.151 Sum_probs=24.0
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeeeCC
Q 043437 89 VMNISIGTPPVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 89 ~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~ 117 (426)
++.|.|| +|.+.+++|||.+++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 5779999 89999999999999999654
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=83.84 E-value=0.99 Score=34.64 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=26.0
Q ss_pred EEEEEeC---CCCcEEEEEEEcCCCceeeeCCCC
Q 043437 89 VMNISIG---TPPVEILAIADTGSDLIWTQCKPC 119 (426)
Q Consensus 89 ~~~i~iG---TP~q~~~~~~DTGS~~~Wv~~~~C 119 (426)
.+.|.|| +|+|.+..++|||.+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5667777 789999999999999999986643
No 44
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=82.85 E-value=1.2 Score=36.21 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=27.3
Q ss_pred CCccEEEEEEeCCCCcEEEEEEEcCCCceeeeCC
Q 043437 84 ALGEYVMNISIGTPPVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 84 ~~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~ 117 (426)
..+.+++++.|+ +++++++||||++.+-+...
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 356689999999 79999999999999888543
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=81.93 E-value=1.3 Score=34.41 Aligned_cols=27 Identities=22% Similarity=0.310 Sum_probs=23.3
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceeeeCC
Q 043437 88 YVMNISIGTPPVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 88 Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~ 117 (426)
=++ |.|| +|.+.+++|||.+++-+...
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 345 9999 89999999999999998654
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=77.53 E-value=2.4 Score=32.63 Aligned_cols=28 Identities=11% Similarity=0.227 Sum_probs=24.7
Q ss_pred EEEEEeCCCCcEEEEEEEcCCCceeeeCCC
Q 043437 89 VMNISIGTPPVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 89 ~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
.+.|.|| +|.+..++|||.+++-+....
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~ 38 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLED 38 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEeccc
Confidence 5779999 899999999999999997654
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=76.50 E-value=2.2 Score=34.71 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=26.9
Q ss_pred CccEEEEEEeCCCCcEEEEEEEcCCCceeeeCC
Q 043437 85 LGEYVMNISIGTPPVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 85 ~~~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~ 117 (426)
..-|++++.|. +++++++||||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 34589999998 89999999999999998654
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=69.96 E-value=5.4 Score=31.62 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=25.0
Q ss_pred cEEEEEEeCCCCcEEEEEEEcCCCceeeeCC
Q 043437 87 EYVMNISIGTPPVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 87 ~Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~ 117 (426)
.-++.+.|+ +|.+.+++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 356789999 89999999999999999654
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=65.73 E-value=6.5 Score=30.74 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=19.9
Q ss_pred eCCCCcEEEEEEEcCCCceeeeCCC
Q 043437 94 IGTPPVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 94 iGTP~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
|| +|.+.+++|||.+++-+....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788999999999999997654
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=63.92 E-value=6 Score=33.84 Aligned_cols=27 Identities=30% Similarity=0.235 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceeeeC
Q 043437 88 YVMNISIGTPPVEILAIADTGSDLIWTQC 116 (426)
Q Consensus 88 Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~ 116 (426)
-.+.|.|| +|.+.+++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 46789999 8999999999999999954
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=43.22 E-value=21 Score=30.46 Aligned_cols=28 Identities=29% Similarity=0.202 Sum_probs=24.4
Q ss_pred EEEEEEeCCCCcEEEEEEEcCCCceeeeCC
Q 043437 88 YVMNISIGTPPVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 88 Y~~~i~iGTP~q~~~~~~DTGS~~~Wv~~~ 117 (426)
=.+.+.|| +|.+..++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 46889999 79999999999999999543
No 52
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=36.96 E-value=25 Score=25.90 Aligned_cols=33 Identities=21% Similarity=0.458 Sum_probs=22.3
Q ss_pred CceEEEEEEEEEEcceeeeecCCCCCcEEEccCCccccCcHH
Q 043437 279 DTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPD 320 (426)
Q Consensus 279 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~iiDTGt~~~~lp~~ 320 (426)
...|.+ .|.||.-. ....++||||++.+++|..
T Consensus 12 ~~~Y~~---~i~iGTP~------Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 12 DAQYYG---EIGIGTPP------QCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TTEEEE---EEEETTTT------EEEEEEEETTCCCEEEEBT
T ss_pred CCeEEE---EEEECCCC------eEEEEEEeCCCCceEEeEc
Confidence 445554 46787421 1345799999999999964
No 53
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=32.09 E-value=39 Score=30.93 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=26.6
Q ss_pred CCccEEEE---EEeCC---CCcEEEEEEEcCCCceeeeCCC
Q 043437 84 ALGEYVMN---ISIGT---PPVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 84 ~~~~Y~~~---i~iGT---P~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
..+.|.++ |.||. +.....++||||++.+++|...
T Consensus 191 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~ 231 (329)
T 3c9x_A 191 SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNV 231 (329)
T ss_dssp TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHH
Confidence 45567665 67875 3467899999999999998763
No 54
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=28.83 E-value=42 Score=30.60 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=25.6
Q ss_pred CCccEEEE---EEeCC-CCcEEEEEEEcCCCceeeeCCC
Q 043437 84 ALGEYVMN---ISIGT-PPVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 84 ~~~~Y~~~---i~iGT-P~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
..+.|.++ |.||. +.....++||||++.+++|...
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~~ 225 (323)
T 1bxo_A 187 SQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSV 225 (323)
T ss_dssp TTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHHH
T ss_pred CCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHHH
Confidence 34566655 66775 3455789999999999998763
No 55
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=27.07 E-value=47 Score=30.38 Aligned_cols=35 Identities=26% Similarity=0.414 Sum_probs=25.8
Q ss_pred CCccEEEE---EEeCCC---CcEEEEEEEcCCCceeeeCCC
Q 043437 84 ALGEYVMN---ISIGTP---PVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 84 ~~~~Y~~~---i~iGTP---~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
..+.|.++ |.||.- .....++||||++.+++|...
T Consensus 190 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~ 230 (329)
T 1oew_A 190 KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV 230 (329)
T ss_dssp TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHHH
Confidence 34566554 678862 356789999999999998763
No 56
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=26.00 E-value=60 Score=28.12 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=24.0
Q ss_pred CccEEEE---EEeCCC-----CcEEEEEEEcCCCceeeeCC
Q 043437 85 LGEYVMN---ISIGTP-----PVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 85 ~~~Y~~~---i~iGTP-----~q~~~~~~DTGS~~~Wv~~~ 117 (426)
.+.|.++ |.||.- .....++||||++.+++|..
T Consensus 187 ~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 187 QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 3466655 778852 34578999999999999754
No 57
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=25.86 E-value=48 Score=30.27 Aligned_cols=34 Identities=24% Similarity=0.353 Sum_probs=25.2
Q ss_pred CCccEEEE---EEeCCC--CcEEEEEEEcCCCceeeeCC
Q 043437 84 ALGEYVMN---ISIGTP--PVEILAIADTGSDLIWTQCK 117 (426)
Q Consensus 84 ~~~~Y~~~---i~iGTP--~q~~~~~~DTGS~~~Wv~~~ 117 (426)
..+.|.++ |.||.+ .....++||||++.+++|..
T Consensus 191 ~~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 191 SRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp TTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CCCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 34556554 678862 34578999999999999876
No 58
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=24.32 E-value=55 Score=29.85 Aligned_cols=35 Identities=31% Similarity=0.398 Sum_probs=25.2
Q ss_pred CCccEEEE---EEeCC--CCcEEEEEEEcCCCceeeeCCC
Q 043437 84 ALGEYVMN---ISIGT--PPVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 84 ~~~~Y~~~---i~iGT--P~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
..+.|.++ |.||. +.+...+++|||++.+++|...
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~~aiiDSGTs~~~lp~~~ 226 (323)
T 1izd_A 187 SQGFWGFTADGYSIGSDSSSDSITGIADTGTTLLLLDDSI 226 (323)
T ss_dssp TTSSCEEEESEEEETTEEECCCEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEECeEEECCcccCCCceEEEeCCCcceeCCHHH
Confidence 34556655 56775 2345789999999999998763
No 59
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=22.72 E-value=78 Score=28.79 Aligned_cols=33 Identities=24% Similarity=0.476 Sum_probs=23.5
Q ss_pred CceEEEEEEEEEEcceeeeecCCCCCcEEEccCCccccCcHHHH
Q 043437 279 DTFYFLTLESISVGKKKIHFDDASEGNIIIDSGTTLTFLPPDIV 322 (426)
Q Consensus 279 ~~~w~v~l~~i~v~~~~~~~~~~~~~~~iiDTGt~~~~lp~~~~ 322 (426)
...|.+ .|.||.+.+ .++||||++.+++|..-.
T Consensus 13 ~~~Y~~---~i~iG~Q~~--------~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 13 DEEYLT---PVTVGKSTL--------HLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp TSCEEE---EEEEBTEEE--------EEEEETTCCCEEEECTTS
T ss_pred CCEEEE---EEEECCEEE--------EEEEeCCCccceEeeCCC
Confidence 556654 466775544 469999999999996543
No 60
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.47 E-value=79 Score=27.21 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=24.5
Q ss_pred CccEEE---EEEeCCC----CcEEEEEEEcCCCceeeeCCC
Q 043437 85 LGEYVM---NISIGTP----PVEILAIADTGSDLIWTQCKP 118 (426)
Q Consensus 85 ~~~Y~~---~i~iGTP----~q~~~~~~DTGS~~~Wv~~~~ 118 (426)
...|.+ .|.||.- .....+++|||++.+++|...
T Consensus 98 ~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 98 KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 345655 4678752 245789999999999998763
Done!