BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043438
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 88/156 (56%), Gaps = 14/156 (8%)
Query: 1 MASFSRNNKKYDVFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDDISESLLNA 60
MAS S N+ +YDVF SFR ED R+NF SHL + I TF DD + R I L A
Sbjct: 1 MASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAA 60
Query: 61 MKHQPFQS------------CLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGI 108
++ CLDEL +I++CK E G V+PVFY+VDPSD+R QTG FG+
Sbjct: 61 IRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGM 120
Query: 109 SFSKLEERFKENSEKLQTWRNALKAAASLSGFHSQN 144
SF LE + E+ WR AL AA++ G H QN
Sbjct: 121 SF--LETCCGKTEERQHNWRRALTDAANILGDHPQN 154
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 87/142 (61%), Gaps = 13/142 (9%)
Query: 11 YDVFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQ-LNRGDDISESLLNAMKHQPF--- 66
YDVF+SFR EDTR FTSHLY L+ + I+TF DD+ L G I L A++ F
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 67 ---------QSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERF 117
+ CL+EL KI+ECK + Q VIP+FY VDPS VRNQ SF +F + E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 118 KENSEKLQTWRNALKAAASLSG 139
K++ E +Q WR AL AA+L G
Sbjct: 132 KDDVEGIQRWRIALNEAANLKG 153
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 106 bits (264), Expect = 6e-23, Method: Composition-based stats.
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 17/149 (11%)
Query: 5 SRNNKKYDVFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDDISESLLNAMKH- 63
S +++YDVF SFR ED RD+F SHL L + I TFIDD++ R I LL+A+K
Sbjct: 6 SSGSRRYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPELLSAIKES 64
Query: 64 --------QPFQS---CLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSK 112
+ + S CL+EL +I +C Q+VIP+F+ VD S+V+ QTG FG F
Sbjct: 65 RIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVF-- 122
Query: 113 LEERFKENSE-KLQTWRNALKAAASLSGF 140
EE K SE + Q+W+ AL A A ++G+
Sbjct: 123 -EETCKAKSEDEKQSWKQALAAVAVMAGY 150
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)
Query: 13 VFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDD-------ISES----LLNAM 61
VF++FR +D R+ F S L A+ NI FID G D I ES ++ +
Sbjct: 16 VFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLVNLFVRIQESRVAVVIFSK 75
Query: 62 KHQPFQSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFKENS 121
+ + CLDEL +I +C + G IP+FY++ PS V G FG +F L+E++K +
Sbjct: 76 DYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGGFGDTFRVLKEKYKNDP 135
Query: 122 EKLQTWRNALKAAASLSGF 140
E+ Q W+ AL++ L G
Sbjct: 136 ERTQKWQEALESIPKLKGL 154
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 11/136 (8%)
Query: 13 VFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRG-------DDISES----LLNAM 61
VF++FR +D R F S L AL ++ I FID+Q RG D I ES ++ +
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLISLFDTIGESKIALVIFSE 83
Query: 62 KHQPFQSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFKENS 121
+ C+DEL KI E + I+IP+FYR+D V++ TG FG +F L ++++
Sbjct: 84 GYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEP 143
Query: 122 EKLQTWRNALKAAASL 137
+KL W AL + L
Sbjct: 144 KKLHKWTEALFSVCEL 159
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 13 VFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDDISESLLNAMKHQPF------ 66
VF+ FR D R +F S L AL NI FID+ G +++ +LL ++
Sbjct: 17 VFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA-NLLTRIEESELALVIFS 75
Query: 67 ------QSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFKEN 120
CL+EL KI E K + IVIP+FY+V PS V+ G FG +F LE +
Sbjct: 76 VDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLEGKFGDNFRALERNNRHM 135
Query: 121 SEKLQTWRNALKAAASLSGF 140
Q W+ AL++ G
Sbjct: 136 LPITQKWKEALESIPGSIGM 155
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 11/144 (7%)
Query: 10 KYDVFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDD-------ISESLLNAM- 61
+Y VF++FR ++ R++F L A+ + I F D+ RG + I ES +
Sbjct: 357 QYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLNYLFRRIEESRVAVAI 416
Query: 62 ---KHQPFQSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFK 118
++ CLDEL K+ E + +V+PVFYR++ + + G+FG + LE ++
Sbjct: 417 FSERYTESCWCLDELVKMKEQMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNLEWEYR 476
Query: 119 ENSEKLQTWRNALKAAASLSGFHS 142
E++Q W+ AL + S G S
Sbjct: 477 SEPERIQKWKEALSSVFSNIGLTS 500
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 17/137 (12%)
Query: 7 NNKKYDVFVSF-RAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDDISES--LLNAMKH 63
++K YDV + + RA+ + ++F SHL ++L R+ I + ++ N D + + L+ +
Sbjct: 664 SSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY--EKFNEVDALPKCRVLIIVLTS 721
Query: 64 QPFQSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFKENSEK 123
S L ILE + ++V P+FYR+ P D + SK ERF E
Sbjct: 722 TYVPS---NLLNILEHQHTEDRVVYPIFYRLSPYDF--------VCNSKNYERFYLQDEP 770
Query: 124 LQTWRNALKAAASLSGF 140
+ W+ ALK + G+
Sbjct: 771 -KKWQAALKEITQMPGY 786
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 13 VFVSFRAEDTRDNFTSHLYSALSRQNIQ-TFID--DQL-NRGDDISESLLNAMKHQPFQS 68
V++S E+ R +F SHL AL R+ + FID D L N + E ++ P
Sbjct: 8 VYISC-IEEVRYSFVSHLSKALQRKGVNDVFIDSDDSLSNESQSMVERARVSVMILPGNR 66
Query: 69 C--LDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFKENSE 122
LD+L K+L+C++ Q+V+PV Y V S+ + FS + KE S+
Sbjct: 67 TVSLDKLVKVLDCQKNKDQVVVPVLYGVRSSETEWLSALDSKGFSSVHHSRKECSD 122
>sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo
sapiens GN=MACF1 PE=1 SV=4
Length = 7388
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 70 LDELEKILECKREYGQIVIPVFYRVDPSDVRNQTGSFGISFSKLEERFKENSEKLQ 125
++EL K+LE E+G+I +P Y P+DV + G I + E+ + E+L+
Sbjct: 374 IEELYKLLEVWIEFGRIKLPQGYH--PNDVEEEWGKLIIEMLEREKSLRPAVERLE 427
>sp|Q8RF14|COBT_FUSNN Nicotinate-nucleotide--dimethylbenzimidazole
phosphoribosyltransferase OS=Fusobacterium nucleatum
subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM
8532 / LMG 13131) GN=cobT PE=3 SV=1
Length = 354
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 9 KKYDVFVSFRAEDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDDISESLLNAMKHQPFQS 68
K YD+F + +S L +++RQNI DD + RG +S+ LN K ++
Sbjct: 169 KDYDMFSNGEMGIANTTTSSALLYSVTRQNI----DDIVGRGGGLSDEGLNKKKKVIIEA 224
Query: 69 C 69
C
Sbjct: 225 C 225
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 24/95 (25%)
Query: 20 EDTRDNFTSHLYSALSRQNIQTFIDDQLNRGDDISESLLNAMK-HQPFQSCL-------- 70
E + SHL +AL R+ I F+D + E+ ++K +QP
Sbjct: 26 ETVLHSLVSHLSAALRREGISVFVD-----ACGLQETKFFSIKQNQPLTDGARVLVVVIS 80
Query: 71 DELE----------KILECKREYGQIVIPVFYRVD 95
DE+E K+++ + G +V+PVFY VD
Sbjct: 81 DEVEFYDPWFPKFLKVIQGWQNNGHVVVPVFYGVD 115
>sp|Q86DA5|SARM1_CAEEL Sterile alpha and TIR motif-containing protein tir-1
OS=Caenorhabditis elegans GN=tir-1 PE=1 SV=1
Length = 1000
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 17/100 (17%)
Query: 8 NKKYDVFVSFRAEDTRDNFTSHLYSALSRQNIQTFID-DQLNRGDDISESLLNAMKHQPF 66
+K+ DVF+S+R T + S + L + + FID D+L G S L N + F
Sbjct: 759 SKQIDVFISYR-RSTGNQLASLIKVLLQLRGYRVFIDVDKLYAGKFDSSLLKNIQAAKHF 817
Query: 67 ---------------QSCLDELEKILECKREYGQIVIPVF 91
+C D + K L+C E+ + +IP+F
Sbjct: 818 ILVLTPNSLDRLLNDDNCEDWVHKELKCAFEHQKNIIPIF 857
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 24 DNFTSHLYSALSRQNIQTFIDDQLNRGDDISESLLN 59
D FT+ + A+ ++N++ ++D++ D+I +LLN
Sbjct: 185 DKFTNVVSKAMKKRNVEVILNDRITMPDEIKANLLN 220
>sp|P42176|NARH_BACSU Nitrate reductase beta chain OS=Bacillus subtilis (strain 168)
GN=narH PE=3 SV=1
Length = 487
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 27 TSHLYSALSRQNIQTFIDDQLNRGDDISESLLNAMKHQPFQSCLDELEKILECKREYGQI 86
T H+ S L + ++ + I L++++ Q ++++ ++L + +
Sbjct: 398 TDHIRSTLKKMSVMRQYMRAVQTNKSIDPELISSVGLTEQQ--IEDMYRLLAIAKYDDRF 455
Query: 87 VIPVFYRVDPSDVRNQTGSFGISFS 111
VIP +R + SD+ + GS G+SFS
Sbjct: 456 VIPSSHREEVSDLYAEQGSCGLSFS 480
>sp|Q9HT80|DPO1_PSEAE DNA polymerase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=polA PE=3 SV=1
Length = 913
Score = 29.6 bits (65), Expect = 7.2, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 45 DQLNRGDDISESLLNAMKHQPFQSCLDELEKILECKREYGQIVIPVFYRVDPSDVRNQTG 104
D+L G+ E+L+ + F++ LD+L + + E G+ P+ VD V +Q G
Sbjct: 261 DKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENGEAETPIQAEVDYDVVLDQAG 320
Query: 105 SFGISFSKLEE 115
F KLEE
Sbjct: 321 -FDAWLKKLEE 330
>sp|Q02989|LITA_LATTR Alpha-latroinsectotoxin-Lt1a (Fragment) OS=Latrodectus
tredecimguttatus PE=1 SV=1
Length = 1411
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 37 QNIQTFIDDQLNRGDDI-SESLLNAMKHQPFQSCLDELEKILECKREYGQIVIPVFYRVD 95
QN + +D+ LN +++ ++S + ++++ F + + E +LE K+E + +P+
Sbjct: 306 QNTKPLVDEVLNVLNNVKNKSFIRNVQNKLFYDLMKQTESLLELKKEIANMELPII---- 361
Query: 96 PSDVRNQTGSFGISFSKLEERFKENSE 122
++T IS S FKE S+
Sbjct: 362 -----DETPRLSISIS-----FKERSD 378
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,708,975
Number of Sequences: 539616
Number of extensions: 1878496
Number of successful extensions: 5277
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 5248
Number of HSP's gapped (non-prelim): 40
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)