BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043441
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 115/163 (70%), Gaps = 1/163 (0%)
Query: 8 DDWELTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKD 67
D++ + P + V +V VGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +
Sbjct: 32 DEFSASQP-HPVENIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPE 90
Query: 68 GQVVNVIDTPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHS 127
G ++NVIDTPGLFD S +EF+G EIVKC+ LA G+HAVL+ SVR+R QEEE L +
Sbjct: 91 GPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLST 150
Query: 128 WQTLFGKKVFDYMIVVFTGGDELEDNEETLEDYLGRECPKPLK 170
Q LFG K+ DY+IVVFTGGD LED+ TLEDYLG P LK
Sbjct: 151 LQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLK 193
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 114/161 (70%), Gaps = 4/161 (2%)
Query: 16 SNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVID 75
S ++ +V VGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVID
Sbjct: 2 SEPIKNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVID 61
Query: 76 TPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKK 135
TPGL D + + EI+ C+ +A++GIHAVL+ S R R +EEE+ +++ Q +FG +
Sbjct: 62 TPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQ 121
Query: 136 VFDYMIVVFTGGDELEDNEETLEDYLGRECP----KPLKVC 172
+ DY IVVFTGGD+LE++++TL+DY CP K L++C
Sbjct: 122 ILDYCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLC 162
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P N +V VG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 75 DTPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGK 134
DTPG+FD + EI++CI L G HA+L+ + R+ +EE A +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 135 KVFDYMIVVFTGGDELEDNEETLEDYLGRECPKPLK 170
+ +MI++FT D+L D L DYL RE P+ ++
Sbjct: 144 RARSFMILIFTRKDDLGDT--NLHDYL-REAPEDIQ 176
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+V +G+TG GKS+TGNSILGR+AF S + +T CE ++ DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIW-DGKELVVVDTPGIFD 91
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
EI +C+ L G HA+L+ + + EE A ++F KK +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPLGC-YTVEEHKATRKLLSMFEKKARRFMI 150
Query: 142 VVFTGGDELEDNEETLEDYL 161
++ T D+LED + + +YL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL 168
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ VG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFS 164
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
E +I C LA G HAVL+ V R+ E++A Q +FG + Y I
Sbjct: 165 PQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTI 221
Query: 142 VVFTGGDELEDNEETLEDYLGRECPKPLKV 171
+VFT ++L E +LE+Y+ K L V
Sbjct: 222 LVFTRKEDLA--EGSLEEYIQENNNKSLDV 249
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+V +G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFD 91
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
EI + + L G HA+L+ + R+ EE A +FGK+ +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 142 VVFTGGDELEDNEETLEDYLGRECPK 167
++ T D+LED + + +YL + PK
Sbjct: 151 LLLTRKDDLEDTD--IHEYLEK-APK 173
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
+V VG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFD 69
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
+ EI +CI + G HA+++ + R+ +EE+ + + +FGK +M+
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVLLL-GRYTEEEQKTVALIKAVFGKSAMKHMV 128
Query: 142 VVFTGGDELE 151
++FT +ELE
Sbjct: 129 ILFTRKEELE 138
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ VG+TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP +
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILS 163
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
E +I C LA G HAVL+ V R+ E++ A Q +FG + Y I
Sbjct: 164 PQNQPEATAKKI--CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTI 220
Query: 142 VVFTGGDELEDNEETLEDYL 161
+VFT +EL E +LE+Y+
Sbjct: 221 LVFTRKEELA--EGSLEEYI 238
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ VGRTG GKSATGNSILG++ F SR + VT +C + + + G V V+DTP +F
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLA-SRMWAGWQVEVVDTPDIFS 64
Query: 82 FSAGSEFVG-MEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYM 140
G +E +C L+ G HA+L+ + RF ++ AL + + LFGK+V
Sbjct: 65 SEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMART 123
Query: 141 IVVFTGGDELEDNEETLEDYL 161
+VVFT ++L + +L+DY+
Sbjct: 124 VVVFTRQEDLAGD--SLQDYV 142
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 88/156 (56%), Gaps = 14/156 (8%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ +G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP LF
Sbjct: 13 LLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFS 71
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
A +E I C+ L+ +HA+L+ ++ F +E+E Q +FG + ++I
Sbjct: 72 SIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARRHII 130
Query: 142 VVFTGGDE---------LEDN---EETLEDYLGREC 165
+VFT D+ +E N ++ ++DY GR C
Sbjct: 131 IVFTRKDDLGDDLLQDFIEKNKPLKQLVQDYEGRYC 166
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG-- 78
+V VGR+G GKSATGNSILG F SR + VT T + R DGQ V V+DTP
Sbjct: 440 NIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFN 498
Query: 79 -LFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVF 137
+ D + E+ +C+ + G ++ F + RF +E++ A+ + +FG
Sbjct: 499 QMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFT 557
Query: 138 DYMIVVFTGGDELEDNEETLEDYLGRECPKPLKVCF 173
Y I++FT ++L LED++ K L+ F
Sbjct: 558 KYAIMLFTRKEDL--GAGNLEDFMKNSDNKALRRIF 591
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 17/145 (11%)
Query: 14 SPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV 73
+P TV+ VG+ G GKSA GNSILGR+AF++ S VT + + + + V++
Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKK-VSI 300
Query: 74 IDTPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVL----VGFSVRSRFPQEEEAALHSWQ 129
ID P + + E+ K I G HA L +GF + + +EA L + Q
Sbjct: 301 IDAPDISSLKN----IDSEVRKHIC---TGPHAFLLVTPLGF-----YTKNDEAVLSTIQ 348
Query: 130 TLFGKKVFDYMIVVFTGGDELEDNE 154
FG+K F+YMI++ T ++L D +
Sbjct: 349 NNFGEKFFEYMIILLTRKEDLGDQD 373
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
++ +GR+G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP F
Sbjct: 477 NIILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPS-F 534
Query: 81 DFSAGSE----FVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKV 136
+ G+E + EI C+ L ++G+ ++ + RF QE+E + + F + +
Sbjct: 535 IQTPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENI 593
Query: 137 FDYMIVVFTGGDELEDNEETLEDYLGRECPKPLK 170
YMIV+FT ++L D + L DY K LK
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LHDYTNNTKNKALK 625
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ +G+ G GKSATGN+ILG+ F+S+ S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
+ SE + +C+ L D H VL+ + + +E+ + G K + +MI
Sbjct: 110 SLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMI 168
Query: 142 VVFTGGDELEDNEETLEDYL 161
VVFT DEL +E++L +Y+
Sbjct: 169 VVFTREDEL--DEDSLWNYI 186
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
V+ +G+ G GKSA GNSILG++ FK++ S + + + G+ V +ID+P +
Sbjct: 287 VLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQGKKVLIIDSPEISS 346
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
+ V G HA L+ + S +++ + +FG+K + I
Sbjct: 347 WKLDESAVKNHTFP-------GPHAFLLVTPLGSSLKSDDD-VFSIIKRIFGEKFTKFTI 398
Query: 142 VVFTGGDELEDN 153
V+FT ++ ED
Sbjct: 399 VLFTRKEDFEDQ 410
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 90/156 (57%), Gaps = 7/156 (4%)
Query: 7 DDDWELTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK 66
+D+ T P+ ++ VG+TG GKSATGNSILG+ F+S+ + VT TC++ +T
Sbjct: 18 EDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTW 73
Query: 67 DGQVVNVIDTPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALH 126
+G+ V V+DTP +F+ A ++ + I C L+ G H +L+ + RF ++ A+
Sbjct: 74 NGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIR 132
Query: 127 SWQTLFGKKVFDYMIVVFTGGDELEDNEETLEDYLG 162
+ +FG +++++FT ++L + L+DY+
Sbjct: 133 KVKEVFGTGAMRHVVILFTHKEDL--GGQALDDYVA 166
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ VG++G GKSATGNSIL R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 87
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
A ++ + +I C L G H +L+ + RF E+ A+ + +FG V +MI
Sbjct: 88 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHMI 146
Query: 142 VVFTGGDELEDNEETLEDYL 161
V+FT ++LE E++LE+++
Sbjct: 147 VLFTRKEDLE--EKSLEEFV 164
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ +G+ G GKSATGN+ILG+ F+SR S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLV---GFSVRSRFPQEEEAALHSWQTLFGKKVFD 138
E + +C+ L D +LV G S +E++ + Q +FG + +
Sbjct: 110 SLGCPEVQQQNLRQCLDLLADPYVLLLVTPIGHST-----EEDKKTIEGIQGVFGPQAYR 164
Query: 139 YMIVVFTGGDELEDNEETLEDYLGRECPKPLK 170
+MIVVFT DEL E+TL++++ E K LK
Sbjct: 165 HMIVVFTREDEL--GEDTLQNHI--ESKKYLK 192
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 88/158 (55%), Gaps = 10/158 (6%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
++ +GR+G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L
Sbjct: 476 NIILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLN 534
Query: 81 DFSAGSE----FVGMEIVKC-IGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKK 135
S G+E + EI +C + ++G+ ++ F + RF QE+EA + + F +
Sbjct: 535 QMS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEEN 592
Query: 136 VFDYMIVVFTGGDELEDNEETLEDYLGRECPKPLKVCF 173
+ YMIV+FT ++L D + L D+ K LK F
Sbjct: 593 IMKYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKRIF 628
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 10 WELTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQ 69
W+ +P V+ +G+ G GKSA GNSILG++ FK++ S + + L + +
Sbjct: 277 WDRDTPE---LRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQK 333
Query: 70 VVNVIDTPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVL----VGFSVRSRFPQEEEAAL 125
+ID+P + + V G HA L +G S++S ++
Sbjct: 334 KFLIIDSPEISSWKLDESDVKEHTF-------PGPHAFLLVTPLGSSLKS-----GDSVF 381
Query: 126 HSWQTLFGKKVFDYMIVVFTGGDELE 151
+ +FG+K + I++FT ++ E
Sbjct: 382 SIIKRIFGEKFIKFTIILFTRKEDFE 407
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ +G+TG+GKSATGNSILGR F+S+ S+ VT T + +R+ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILS 101
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
E V I + I L+ G HAVL+ + RF E++ + Q +FG V + I
Sbjct: 102 PQVSPE-VADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTI 159
Query: 142 VVFTGGDELEDNEETLEDYL 161
+VFT ++L +LEDY+
Sbjct: 160 LVFTRKEDLAGG--SLEDYV 177
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 5/158 (3%)
Query: 14 SPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV 73
S R ++ VGRTG GKSATGNSILG+R F SR ++ VT C + D V V
Sbjct: 22 SRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTG-SRRWDKCHVEV 80
Query: 74 IDTPGLFDFSAGSEFVGMEIV-KCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLF 132
+DTP +F G E C L+ G HA+L+ + RF +++ A+ + +F
Sbjct: 81 VDTPDIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMF 139
Query: 133 GKKVFDYMIVVFTGGDELEDNEETLEDYLGRECPKPLK 170
G+ V +M++VFT ++L +L DY+ + L+
Sbjct: 140 GEDVLKWMVIVFTRKEDLAGG--SLHDYVSNTENRALR 175
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 81/140 (57%), Gaps = 4/140 (2%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ VG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +IDTP +F
Sbjct: 25 IILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IIDTPDMFS 83
Query: 82 FSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYMI 141
+ E + E+ +C L+ G H +L+ + R+ +++ A + +FG+ + I
Sbjct: 84 WKDHCEALYKEVQRCYLLSAPGPHVLLL-VTQLGRYTSQDQQAAQRVKEIFGEDAMGHTI 142
Query: 142 VVFTGGDELEDNEETLEDYL 161
V+FT ++L N +L DY+
Sbjct: 143 VLFTHKEDL--NGGSLMDYM 160
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 89/149 (59%), Gaps = 5/149 (3%)
Query: 13 TSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVN 72
TS S +R ++ VG++G GKSATGNS+L R AF+SR VT T + + T +G+ +
Sbjct: 17 TSGSRPLR-ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSIL 74
Query: 73 VIDTPGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLF 132
V+DTP +F+ A ++ + +I C L G H +L+ + RF E+ A+ + +F
Sbjct: 75 VVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVF 133
Query: 133 GKKVFDYMIVVFTGGDELEDNEETLEDYL 161
G V +MIV+FT ++L E++LE+++
Sbjct: 134 GVGVMRHMIVLFTRKEDL--AEKSLEEFV 160
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 17 NGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDT 76
+G+ ++ VG++G GKSATGNSIL R AF+SR VT T + + +G+ V+DT
Sbjct: 42 SGLLRILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDT 100
Query: 77 PGLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKV 136
P +F+ ++ + +I C + G H +L+ + R+ E+ A+ + +FG V
Sbjct: 101 PPIFESKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGV 159
Query: 137 FDYMIVVFTGGDELEDNEETLEDYL 161
YMIV+FT ++L D E+LE+++
Sbjct: 160 MRYMIVLFTHKEDLAD--ESLEEFV 182
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 80/144 (55%), Gaps = 12/144 (8%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ VG++G+GKSATGNSILGRR F+S+ S+ VT + Q +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQ-QGCRAWEGRELQVIDTPDILS 154
Query: 82 FSAGSEFVGMEIVKCIGLAKDG----IHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVF 137
A G + +G A G +AVL+ + RF +E++ + +FGK +
Sbjct: 155 PWA----AGWATAQGVGEAGTGSLPKQYAVLL-VTQLGRFTEEDQQVAGRLEEVFGKGIL 209
Query: 138 DYMIVVFTGGDELEDNEETLEDYL 161
I+VFT ++L+ +LE YL
Sbjct: 210 ARTILVFTRKEDLDGR--SLETYL 231
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 12 LTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV- 70
+T + + + GRT +GKS+ GN +LG F S + VT C + R+ G +
Sbjct: 1 MTDTNKMIINLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMR 60
Query: 71 ---------VNVIDTPGLFDFSAGSEFVGMEIVKCI--GLAKDGIH-AVLVGFSVRSRFP 118
+ V+DTPG + V E+ K + ++G+H A+LV + F
Sbjct: 61 RGGQEISLQIQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFG 120
Query: 119 QEEEAALHSWQTLFGKKVFDYMIVVFTGGDELEDNEETLEDYLGRECPKPL 169
QE A+ Q L G +YM V+FT +ELE+ + E+YL RE L
Sbjct: 121 QEASNAVQLMQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL-REASDTL 170
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 12 LTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------- 64
+T P+ + + G T +GKS+ GN +LG F S + VT+ C + R+
Sbjct: 1 MTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMR 60
Query: 65 ---LKDGQVVNVIDTPGLFDFSAGSEFVGMEIVKCIG--LAKDGIHAVLVGFSVRSRFP- 118
L+ V V+DTPG ++V E+ + + + G+H L+ R+ P
Sbjct: 61 RGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALL--VQRADVPF 118
Query: 119 --QEEEAALHSWQTLFGKKVFDYMIVVFTGGDELEDNEETLEDYL 161
QE + Q L G +Y ++FT +++E+ T + YL
Sbjct: 119 CGQEVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL 163
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 70
+ +G+T +GKS+ GN +LG F SR + VT C + R+ G +
Sbjct: 9 NLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQ 68
Query: 71 VNVIDTPGLFDFSAGSEFVGMEIVKCI--GLAKDGIH-AVLVGFSVRSRFPQEEEAALHS 127
+ V+DTPG + V E+ K + ++G+H A+LV + F QE ++
Sbjct: 69 IQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQL 128
Query: 128 WQTLFGKKVFDYMIVVFTGGDELEDNEETLEDYL 161
Q L G +Y ++FT +++++ + E+YL
Sbjct: 129 IQELLGDSWKNYTAILFTHAEKIKEAGLSEEEYL 162
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 12 LTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVV 71
LTS S+ ++T+ VG TG+G++AT N+I G++ +S ++ VT C+ + D +
Sbjct: 874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPIN 933
Query: 72 NVIDTPG 78
N+IDTPG
Sbjct: 934 NMIDTPG 940
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRT------VLKDGQ----V 70
+ G T +GKS+ GN ILG F S + VT C + R+ + + GQ
Sbjct: 9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQ 68
Query: 71 VNVIDTPGLFDFSAGSEFVGMEIVKCIG--LAKDGIHAVLVGFSVRSRFP---QEEEAAL 125
V V+DTPG + V E+ + + ++G+H L+ R+ P QEE + +
Sbjct: 69 VQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALL--VQRADVPLCGQEESSPV 126
Query: 126 HSWQTLFGKKVFDYMIVVFTGGDELEDNEETLEDYLGRECPKPL 169
Q L G +Y ++FT +++E+ ++YL RE + L
Sbjct: 127 QMIQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETL 169
>sp|Q2LVW9|ENGB_SYNAS Probable GTP-binding protein EngB OS=Syntrophus aciditrophicus
(strain SB) GN=engB PE=3 SV=1
Length = 196
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P + V FVGR+ GKS+ N++L R+ +++ G T Q + +
Sbjct: 19 PPGSLPEVAFVGRSNVGKSSLINTLLRRKQLARTSNTPGRTQLINF----FNVNQELLFV 74
Query: 75 DTPGLFDFSAGSEFVGME---IVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTL 131
D PG + F+ E V E +++ ++ + V+ +R R P +E+ AL W
Sbjct: 75 DLPG-YGFARVPEAVKREWGPMIETYLRDRECLRMVVFILDIR-RDPSQEDLALKGWLDY 132
Query: 132 FGKKVFDYMIVVFTGGDELEDNE 154
+G++ + V T D+L E
Sbjct: 133 YGRRT----LFVLTKSDKLSRGE 151
>sp|A8MIS4|ENGB_ALKOO Probable GTP-binding protein EngB OS=Alkaliphilus oremlandii
(strain OhILAs) GN=engB PE=3 SV=1
Length = 208
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVN-- 72
P NG+ + GR+ GKS+T N+IL RR ++S G T T +VN
Sbjct: 19 PENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINF--------YIVNNE 70
Query: 73 --VIDTP--GLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSW 128
++D P G S G + ++++ ++ ++ V++ +R P ++ ++ W
Sbjct: 71 FHIVDLPGYGYAKVSKGEKETWGKMMETYLSSRKNLYEVILLVDIRHE-PTADDKMMYDW 129
Query: 129 QTLFG 133
+G
Sbjct: 130 IKHYG 134
>sp|C0QLA5|ENGB_DESAH Probable GTP-binding protein EngB OS=Desulfobacterium autotrophicum
(strain ATCC 43914 / DSM 3382 / HRM2) GN=engB PE=3 SV=1
Length = 194
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
V F GR+ GKS+ N+++ R++ +S G T L +G ++++D PG +
Sbjct: 26 VAFAGRSNVGKSSLINTLINRKSLVKTSSKPGCTQLINF---FLLNGN-LSLVDLPG-YG 80
Query: 82 FSAGSEFVGME---IVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFD 138
++ S+ + + +++ ++ + A+++ +R R PQ EE L +W F
Sbjct: 81 YAKVSKKIRAQWGPMIERYLTVRETLRAIVLLIDMR-REPQREELDLINW---FTAHAIP 136
Query: 139 YMIVVFTGGDELEDNEE 155
Y IV+ T D+L ++
Sbjct: 137 YRIVL-TKADKLSKTKQ 152
>sp|A6TM67|ENGB_ALKMQ Probable GTP-binding protein EngB OS=Alkaliphilus metalliredigens
(strain QYMF) GN=engB PE=3 SV=1
Length = 208
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
P G+ + GR+ GKS+ N+IL R+ +SS G T T + +++
Sbjct: 19 PEEGLPEIALAGRSNVGKSSLINTILNRKKLARVSSSPGKTRTLNFYLI----NKEFHLV 74
Query: 75 DTP--GLFDFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLF 132
D P G S G + ++++ + ++ V++ +R P E++ ++ W +
Sbjct: 75 DLPGYGYARVSKGEKSSWGKMLETYLSNRPNLYEVVLLIDIRHE-PSEQDQQMYQWIRHY 133
Query: 133 GKKVFDYMIVVFTGGDEL 150
G IVV T D++
Sbjct: 134 GYGT----IVVATKSDKI 147
>sp|Q97FU0|ENGB_CLOAB Probable GTP-binding protein EngB OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=engB PE=3 SV=1
Length = 200
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 41/175 (23%)
Query: 10 WELTSPSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQ 69
W+ P +G + FVGR+ GKS+ N+I RR + + G +T L +
Sbjct: 14 WKKQFPIDGKDEIAFVGRSNVGKSSLINAITNRRKLVKVSGTPG--------KTRLVNFF 65
Query: 70 VVN----VIDTPG----------LFDFSAGSE--FVGMEIVKCIGLAKDGIHAVLVGFSV 113
++N +D PG L +S E VG E +K + L D H
Sbjct: 66 MINNDFYFVDLPGYGYAKVSKKELEKWSQTIEGYLVGREQLKKVILLVDSRHK------- 118
Query: 114 RSRFPQEEEAALHSWQTLFGKKVFDYM-IVVFTGGDELEDNEETLEDYLGRECPK 167
P +++ +++W K +DY IV+ T D+++ +E+ + L +E K
Sbjct: 119 ----PTKDDITMYNWI-----KYYDYKCIVIATKSDKIKRSEKVKNEKLIKETLK 164
>sp|Q04XC3|ENGB_LEPBL Probable GTP-binding protein EngB OS=Leptospira borgpetersenii
serovar Hardjo-bovis (strain L550) GN=engB PE=3 SV=1
Length = 221
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE---MQRTVLKDGQVV 71
PS G+ + F GR+ GKS+ N+IL R++ +S+ G T + R++
Sbjct: 29 PSQGIPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFVNRSIY------ 82
Query: 72 NVIDTPGLFDFSAGS----EFVGMEIVKCIGLAKD 102
++D PG F +SA S E + ++ + LAKD
Sbjct: 83 -LVDLPG-FGYSANSHKDHEAMMDLLMDYLNLAKD 115
>sp|Q04W49|ENGB_LEPBJ Probable GTP-binding protein EngB OS=Leptospira borgpetersenii
serovar Hardjo-bovis (strain JB197) GN=engB PE=3 SV=1
Length = 221
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE---MQRTVLKDGQVV 71
PS G+ + F GR+ GKS+ N+IL R++ +S+ G T + R++
Sbjct: 29 PSQGIPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFVNRSIY------ 82
Query: 72 NVIDTPGLFDFSAGS----EFVGMEIVKCIGLAKD 102
++D PG F +SA S E + ++ + LAKD
Sbjct: 83 -LVDLPG-FGYSANSHKDHEAMMDLLMDYLNLAKD 115
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
V+ +GRTG GKS+T N++ G +S S R V +G +N+IDTPG
Sbjct: 153 NVLLLGRTGVGKSSTLNTVFG-IDIPVHSSESCTQDPFTYSRVV--NGFKLNIIDTPGFL 209
Query: 81 DFSAGSEFVGMEIVKCIG-LAKDGIHAVL-VGFSVRSRFPQEEEAALHSWQTLFGKKVFD 138
D S G ++K L+ IH VL V +RF + ++ + G +++
Sbjct: 210 D-SQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWR 268
Query: 139 YMIVVFT 145
VV T
Sbjct: 269 NAAVVLT 275
>sp|Q8F9P7|ENGB_LEPIN Probable GTP-binding protein EngB OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=engB PE=3 SV=1
Length = 217
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
PS G + F GR+ GKS+ N+IL R++ +S+ G T + ++
Sbjct: 29 PSQGTPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFV----NHSIYLV 84
Query: 75 DTPGLFDFSAGSE-----FVGMEIVKCIGLAKD 102
D PG F +SA S +G+ ++ + LAKD
Sbjct: 85 DLPG-FGYSANSHKDHEAMMGL-LMDYLNLAKD 115
>sp|Q72W11|ENGB_LEPIC Probable GTP-binding protein EngB OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=engB PE=3 SV=1
Length = 217
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 15 PSNGVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 74
PS G + F GR+ GKS+ N+IL R++ +S+ G T + ++
Sbjct: 29 PSQGTPQIAFAGRSNAGKSSLLNAILERKSLAKVSSTPGKTKLLNFFFV----NHSIYLV 84
Query: 75 DTPGLFDFSAGSE-----FVGMEIVKCIGLAKD 102
D PG F +SA S +G+ ++ + LAKD
Sbjct: 85 DLPG-FGYSANSHKDHEAMMGL-LMDYLNLAKD 115
>sp|Q87TS2|MNME_PSESM tRNA modification GTPase MnmE OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G++ +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q4ZL12|MNME_PSEU2 tRNA modification GTPase MnmE OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G++ +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|A4Y199|MNME_PSEMY tRNA modification GTPase MnmE OS=Pseudomonas mendocina (strain ymp)
GN=mnmE PE=3 SV=1
Length = 455
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTDDQVERIGVERALKAIGEA 296
>sp|Q48BF3|MNME_PSE14 tRNA modification GTPase MnmE OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G++ +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 81
++ +G+TG GKSAT NSI G+ ++ A G E+ TV G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 82 FSAGSEFVGMEIVKCI 97
S+ S +I+ I
Sbjct: 227 LSSSSTRKNRKILLSI 242
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFK-SRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 79
TV+ +G+ G GKS+T NS++G +A S S G+ T + RT + G +N+IDTPGL
Sbjct: 40 TVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTL-VSRT--RSGFTLNIIDTPGL 96
Query: 80 FD 81
+
Sbjct: 97 IE 98
>sp|A6VF44|MNME_PSEA7 tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
PA7) GN=mnmE PE=3 SV=1
Length = 455
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q9HT07|MNME_PSEAE tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=mnmE
PE=3 SV=1
Length = 455
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q02DE1|MNME_PSEAB tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=mnmE PE=3 SV=1
Length = 455
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q15MS9|MNME_PSEA6 tRNA modification GTPase MnmE OS=Pseudoalteromonas atlantica
(strain T6c / ATCC BAA-1087) GN=mnmE PE=3 SV=1
Length = 460
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 18 GVRTVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVN 72
G+R VV GR GKS+ N++ GR A + VT+ R VLK DG ++
Sbjct: 222 GMR-VVIAGRPNAGKSSLLNALAGRDA-------AIVTAIAGTTRDVLKEHIHIDGMPLH 273
Query: 73 VIDTPGLFDFSAGSEFVGME 92
+IDT GL D S E +G+E
Sbjct: 274 IIDTAGLRDSSDEVERIGIE 293
>sp|Q3K429|MNME_PSEPF tRNA modification GTPase MnmE OS=Pseudomonas fluorescens (strain
Pf0-1) GN=mnmE PE=3 SV=1
Length = 456
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N++ GR A + VT R +L+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDILREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTDDHVEKIGVERALKAIGEA 296
>sp|B1JFV3|MNME_PSEPW tRNA modification GTPase MnmE OS=Pseudomonas putida (strain W619)
GN=mnmE PE=3 SV=1
Length = 456
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N + GR A + VT+ R +L+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNQLAGREA-------AIVTAIAGTTRDILREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTDDHVEKIGVERALKAIGEA 296
>sp|Q1I2H5|MNME_PSEE4 tRNA modification GTPase MnmE OS=Pseudomonas entomophila (strain
L48) GN=mnmE PE=3 SV=1
Length = 456
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 75
TVV GR GKS+ N + GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNQLAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 76 TPGLFDFSAGSEFVGME-IVKCIGLA 100
T GL D E +G+E +K IG A
Sbjct: 271 TAGLRDTDDHVEKIGVERALKAIGEA 296
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 21 TVVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 80
T++ +G+ G GKS+T NSI+G R S + R+ + G +N+IDTPGL
Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLI 98
Query: 81 DFSAGSEFVGMEIVKCIGLAKDGIHAVLVGFSVRSRFPQEEEAALHSWQTLFGKKVFDYM 140
+ ++ + + I+K L K + V R ++ + FGK +++
Sbjct: 99 EGGYIND-MALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKA 157
Query: 141 IVVFT 145
IV T
Sbjct: 158 IVALT 162
>sp|Q6CYQ9|MNME_ERWCT tRNA modification GTPase MnmE OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=mnmE
PE=3 SV=1
Length = 454
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 22 VVFVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVIDT 76
VV GR GKS+ N++ GR A + VT+ R VL+ DG +++IDT
Sbjct: 219 VVIAGRPNAGKSSLLNALAGREA-------AIVTAIAGTTRDVLREHIHIDGMPLHIIDT 271
Query: 77 PGLFDFSAGSEFVGME 92
GL D S E +G+E
Sbjct: 272 AGLRDASDEVERIGIE 287
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,744,430
Number of Sequences: 539616
Number of extensions: 2760409
Number of successful extensions: 12139
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 452
Number of HSP's that attempted gapping in prelim test: 11813
Number of HSP's gapped (non-prelim): 586
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)