Query 043442
Match_columns 309
No_of_seqs 210 out of 1198
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:22:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043442.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043442hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 8.2E-80 2.8E-84 564.0 29.3 291 1-298 4-312 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 3.8E-75 1.3E-79 541.5 29.9 283 3-294 46-344 (356)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 7.4E-76 2.5E-80 538.4 19.6 279 1-294 1-292 (319)
4 1odm_A Isopenicillin N synthas 100.0 2.2E-73 7.5E-78 525.2 27.6 279 2-294 7-323 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 7.3E-72 2.5E-76 510.7 19.5 268 2-296 3-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 3.5E-69 1.2E-73 485.9 28.1 254 2-297 2-279 (280)
7 3dkq_A PKHD-type hydroxylase S 95.0 0.044 1.5E-06 47.3 6.7 79 162-259 99-194 (243)
8 2rg4_A Uncharacterized protein 93.2 1.6 5.6E-05 36.6 12.6 42 208-261 166-208 (216)
9 2hbt_A EGL nine homolog 1; pro 86.6 1.3 4.5E-05 38.0 6.4 82 163-260 118-213 (247)
10 3itq_A Prolyl 4-hydroxylase, a 83.3 3.4 0.00012 34.7 7.4 84 163-259 112-211 (216)
11 2jig_A Prolyl-4 hydroxylase; h 82.7 2.3 7.7E-05 35.7 6.1 88 163-260 99-217 (224)
12 2iuw_A Alkylated repair protei 82.6 4 0.00014 34.7 7.7 84 163-258 127-228 (238)
13 3tht_A Alkylated DNA repair pr 80.3 3 0.0001 37.7 6.3 93 162-261 198-314 (345)
14 3s57_A Alpha-ketoglutarate-dep 73.6 9.5 0.00032 31.5 7.1 83 163-257 101-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 67.9 17 0.00058 30.2 7.4 79 163-257 106-200 (211)
16 2dbn_A Hypothetical protein YB 45.9 7.3 0.00025 36.4 1.5 52 3-64 100-151 (461)
17 2opi_A L-fuculose-1-phosphate 43.8 12 0.00041 31.0 2.4 35 3-44 125-159 (212)
18 1m5a_B Insulin B chain; alpha 37.1 33 0.0011 19.0 2.7 17 23-39 10-26 (30)
19 1e4c_P L-fuculose 1-phosphate 36.6 16 0.00056 30.2 2.2 35 3-44 122-156 (215)
20 1pvt_A Sugar-phosphate aldolas 35.4 20 0.0007 30.1 2.6 35 3-44 161-195 (238)
21 3o2g_A Gamma-butyrobetaine dio 35.1 15 0.00051 33.5 1.8 52 3-65 122-173 (388)
22 2fk5_A Fuculose-1-phosphate al 32.8 22 0.00074 29.1 2.3 53 3-62 117-176 (200)
23 4ay7_A Methylcobalamin\: coenz 31.1 1.2E+02 0.0041 26.7 7.2 42 23-64 305-348 (348)
24 2v9l_A Rhamnulose-1-phosphate 29.2 21 0.00072 30.8 1.7 35 3-44 179-213 (274)
25 2irp_A Putative aldolase class 29.2 21 0.00071 29.3 1.6 23 22-44 150-175 (208)
26 1e5r_A Proline oxidase; oxidor 27.8 56 0.0019 28.5 4.2 73 163-258 93-175 (290)
27 1otj_A Alpha-ketoglutarate-dep 27.3 37 0.0013 29.0 3.0 37 23-64 30-66 (283)
28 3kt7_A PKHD-type hydroxylase T 23.6 1.2E+02 0.0041 29.4 5.8 80 164-259 126-227 (633)
29 3jsy_A Acidic ribosomal protei 23.1 1.7E+02 0.0058 24.0 6.2 40 20-61 4-44 (213)
30 3ocr_A Class II aldolase/adduc 21.1 39 0.0013 29.1 1.9 36 3-44 156-191 (273)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=8.2e-80 Score=563.96 Aligned_cols=291 Identities=20% Similarity=0.254 Sum_probs=259.5
Q ss_pred CCCCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCC-CCC
Q 043442 1 MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYE-RPL 79 (309)
Q Consensus 1 m~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~ 79 (309)
|++||||||+.+ . .++++++++|.+||++||||||+||| |+.++++++++.+++||+||.|+|+++... ...
T Consensus 4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHG--i~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~ 76 (312)
T 3oox_A 4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYD--LDQARIDAAVDSAKAFFALPVETKKQYAGVKGGA 76 (312)
T ss_dssp CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCC--SCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGT
T ss_pred CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCC--CCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCc
Confidence 678999999974 2 24678999999999999999999999 999999999999999999999999999763 467
Q ss_pred ceeecCCC-------CCCccceeecCCCCC--hhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 043442 80 TGYVGQIP-------KLPLHESMGIDNATS--LEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE 150 (309)
Q Consensus 80 ~GY~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~ 150 (309)
+||.+.+. ..|++|.|.++.... ......+.+|.||+.+|+||+++++|+++|.+++.+|+++|+++||++
T Consensus 77 ~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~ 156 (312)
T 3oox_A 77 RGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE 156 (312)
T ss_dssp SEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred cccccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 99987553 258999999875321 222234567899999999999999999999999999999999999999
Q ss_pred -chhhhhhcccccceeeccccCCCCCCCCccccccccCCceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEEhhHHHH
Q 043442 151 -KYHDSYIESITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALM 229 (309)
Q Consensus 151 -~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~ 229 (309)
++|++.+..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++||||||+||
T Consensus 157 ~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 236 (312)
T 3oox_A 157 RDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE 236 (312)
T ss_dssp TTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred HHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence 9999988888899999999998875445999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCcccCCCceeecCC----CCceEEEEeccCCCc--ceeCCCccCCCCCCCCCC-CccHHHHHHHHhcccccC
Q 043442 230 AWSNDRIHSPSHRVIMNG----AVDRYSLALFSFSSG--IVKVPDELVDDEHPLKYK-PFEHFGLLRYFRTDEGYK 298 (309)
Q Consensus 230 ~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~g~~ 298 (309)
+||||+||||+|||++++ +.+|||++||++|+. +|.|+++|+++++|++|+ ++|++||+..|++++|++
T Consensus 237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~~l~ 312 (312)
T 3oox_A 237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIKLA 312 (312)
T ss_dssp HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHHC--
T ss_pred HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHhccC
Confidence 999999999999998763 467999999999998 999999999999999999 999999999999998874
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=3.8e-75 Score=541.47 Aligned_cols=283 Identities=21% Similarity=0.278 Sum_probs=255.6
Q ss_pred CCCEEECCCCCCCCCc-hhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCC---CC
Q 043442 3 KLPVVDFSNKDLKPGT-NSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYE---RP 78 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~-~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~---~~ 78 (309)
+||||||+.+ .+++ ..|++++++|.+||++||||||+||| |+.++++++++.+++||+||.|+|+++... ..
T Consensus 46 ~iPvIDls~l--~~~~~~~~~~~~~~l~~A~~~~GFF~v~nHG--i~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~ 121 (356)
T 1gp6_A 46 QVPTIDLKNI--ESDDEKIRENCIEELKKASLDWGVMHLINHG--IPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121 (356)
T ss_dssp CCCEEECTTT--TCSCHHHHHHHHHHHHHHHHHTSEEEEESCS--CCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred CCCEEEchhc--cCCChHHHHHHHHHHHHHHHhCCEEEEeCCC--CCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccC
Confidence 5999999984 4444 34788999999999999999999999 999999999999999999999999999764 25
Q ss_pred CceeecCCC-----CCCccceeecCCCCChhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-ch
Q 043442 79 LTGYVGQIP-----KLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE-KY 152 (309)
Q Consensus 79 ~~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~ 152 (309)
.+||..... ..|++|.|.++.... ....+|.||+.+++||+.+++|+++|.+++.+|+++|+++||++ ++
T Consensus 122 ~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~----~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~ 197 (356)
T 1gp6_A 122 IQGYGSKLANNASGQLEWEDYFFHLAYPE----EKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDR 197 (356)
T ss_dssp CSEEECCCCCSTTCCCCSCEEEEEEEESG----GGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTH
T ss_pred ccccCcCcccCCCCCCChhheeeeecCCc----cccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 789987542 358999998874321 11356899999999999999999999999999999999999999 99
Q ss_pred hhhhhc---ccccceeeccccCCCCCCCCccccccccCCceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEEhhHHHH
Q 043442 153 HDSYIE---SITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALM 229 (309)
Q Consensus 153 ~~~~~~---~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~ 229 (309)
|++.+. .+.+.||++||||++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||
T Consensus 198 f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~ 276 (356)
T 1gp6_A 198 LEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLE 276 (356)
T ss_dssp HHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHH
T ss_pred HHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEcCCCCeEEe-cCCcEEECcCCCCeEEEEeccHHH
Confidence 988876 4678999999999988777899999999999999999999999997 689999999999999999999999
Q ss_pred HHhCCcccCCCceeecCCCCceEEEEeccCCCc---ceeCCCccCCCCCCCCCCCccHHHHHHHHhcc
Q 043442 230 AWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSG---IVKVPDELVDDEHPLKYKPFEHFGLLRYFRTD 294 (309)
Q Consensus 230 ~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~---~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~ 294 (309)
+||||+||||+|||+.+++.+|||++||++|+. +|.|+++|+++++|++|+++|++||+..+++.
T Consensus 277 ~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~ 344 (356)
T 1gp6_A 277 ILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFG 344 (356)
T ss_dssp HHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred HhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHh
Confidence 999999999999999988889999999999998 58999999999999999999999999988764
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=7.4e-76 Score=538.38 Aligned_cols=279 Identities=20% Similarity=0.258 Sum_probs=245.6
Q ss_pred CCCCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCCCCCc
Q 043442 1 MLKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYERPLT 80 (309)
Q Consensus 1 m~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~ 80 (309)
|++||||||+.+ . .++|++++++|.+||++||||||+||| |+.++++++++.+++||+||.|+|+++... .+
T Consensus 1 m~~iPvIDls~l--~--~~~~~~~~~~l~~A~~~~GFF~v~nHG--i~~~l~~~~~~~~~~FF~lP~e~K~~~~~~--~~ 72 (319)
T 1w9y_A 1 MENFPIISLDKV--N--GVERAATMEMIKDACENWGFFELVNHG--IPREVMDTVEKMTKGHYKKCMEQRFKELVA--SK 72 (319)
T ss_dssp -CCCCEEEGGGG--G--STTHHHHHHHHHHHHHHTSEEEEESCS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
T ss_pred CCCCCEEECccc--C--cccHHHHHHHHHHHHHhCCEEEEEcCC--CCHHHHHHHHHHHHHHHcCCHHHHhhhccC--CC
Confidence 889999999984 3 234778999999999999999999999 999999999999999999999999998532 34
Q ss_pred eeecCCC---CCCccceeecCCCCChhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-chhhhh
Q 043442 81 GYVGQIP---KLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE-KYHDSY 156 (309)
Q Consensus 81 GY~~~~~---~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~ 156 (309)
||.+.+. ..|++|.|.++... ...+|.||+.+++||+.+++|+++|.+++.+|+++|+++||++ ++|++.
T Consensus 73 Gy~~~~~e~~~~d~ke~~~~~~~p------~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 146 (319)
T 1w9y_A 73 ALEGVQAEVTDMDWESTFFLKHLP------ISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNA 146 (319)
T ss_dssp HHTTCCCCGGGCCCCEEEEEEEES------CCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred CCCcccccCCCCChhhheeeecCC------cccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 8876543 25899999886421 1135789999999999999999999999999999999999999 999887
Q ss_pred hcc---cccceeeccccCCCCCCCCccccccccCCceeEEecC-CCCceeEEcCCCCeEEecCCCCeEEEEhhHHHHHHh
Q 043442 157 IES---ITYLLRVLKNRAPIGGEPNLGFVTHTDKSFTTILHQN-QINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWS 232 (309)
Q Consensus 157 ~~~---~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd-~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~T 232 (309)
+.+ +.+.||++||||++.++...|+++|||+|+||||+|| +++||||+ ++|+|++|+|+||++|||+||+||+||
T Consensus 147 ~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~S 225 (319)
T 1w9y_A 147 FYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVIT 225 (319)
T ss_dssp HHTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred hcCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHHh
Confidence 763 5578999999999887778999999999999999995 79999995 789999999999999999999999999
Q ss_pred CCcccCCCceeecCCCCceEEEEeccCCCc--ceeCCCccCCCC---CCCCCCCccHHHHHHHHhcc
Q 043442 233 NDRIHSPSHRVIMNGAVDRYSLALFSFSSG--IVKVPDELVDDE---HPLKYKPFEHFGLLRYFRTD 294 (309)
Q Consensus 233 nG~~ks~~HRV~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~---~p~~y~~~t~~e~~~~~~~~ 294 (309)
||+||||+|||+.+++.+|||++||++|+. +|.|+++|++++ +|++|+++|++||+..+++.
T Consensus 226 nG~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~ 292 (319)
T 1w9y_A 226 NGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGL 292 (319)
T ss_dssp TTSSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTT
T ss_pred CCeeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhh
Confidence 999999999999998889999999999998 999999999987 59999999999999988764
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2.2e-73 Score=525.21 Aligned_cols=279 Identities=16% Similarity=0.209 Sum_probs=248.0
Q ss_pred CCCCEEECCCCCCCCCc-hhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHh-cCCCHHHHhhccCCCCC
Q 043442 2 LKLPVVDFSNKDLKPGT-NSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNL-FDLPTETKMKNKYERPL 79 (309)
Q Consensus 2 ~~iPvIDl~~~~l~~~~-~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~ 79 (309)
.+||||||+.+ ..++ ++|++++++|.+||++||||||+||| | +++++++.+++| |+||.|+|+++..
T Consensus 7 ~~iPvIDls~l--~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHG--i---l~~~~~~~~~~F~F~lP~eeK~~~~~---- 75 (331)
T 1odm_A 7 ANVPKIDVSPL--FGDDQAAKMRVAQQIDAASRDTGFFYAVNHG--I---NVQRLSQKTKEFHMSITPEEKWDLAI---- 75 (331)
T ss_dssp CCCCEEECGGG--GSSCHHHHHHHHHHHHHHHHTTSEEEEESCC--C---CHHHHHHHHHHHHHHCCHHHHHHHBC----
T ss_pred CCCCEEEchHh--cCCChHHHHHHHHHHHHHHHhCCEEEEEccc--e---eHHHHHHHHHhccCCCCHHHHHhhhh----
Confidence 46999999984 4444 45788999999999999999999999 9 999999999999 9999999999975
Q ss_pred ceeecCCC-------------CCCccceeecCCCCC--hhHH----hccccCCCCCC--ChhHHHHHHHHHHHHHHHHHH
Q 043442 80 TGYVGQIP-------------KLPLHESMGIDNATS--LEAA----QSFTKIMWPQG--NDSFCKIVHSYATLAAELDRT 138 (309)
Q Consensus 80 ~GY~~~~~-------------~~d~~E~~~~~~~~~--~~~~----~~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ 138 (309)
+||.+.+. ..|++|.|.++.... .+.. ....+|.||+. +|+||+.+++|+++|.+++.+
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 67775432 348999999985421 1111 12347899998 999999999999999999999
Q ss_pred HHHHHHHhCCCc-chhhhhhccccccee--ecccc------C---CCCCCC-CccccccccCCceeEEecCCCCceeEEc
Q 043442 139 VSRMIFESYSLE-KYHDSYIESITYLLR--VLKNR------A---PIGGEP-NLGFVTHTDKSFTTILHQNQINGLEIDT 205 (309)
Q Consensus 139 ll~~l~~~Lgl~-~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~HtD~~~lTlL~qd~~~GLqv~~ 205 (309)
|+++|+++||++ ++|++.++.+.+.|| ++||| | ++.++. .+|+++|||+|+||||+||+++||||++
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 999999999999 999998888889999 99999 7 665555 7899999999999999999999999998
Q ss_pred CCCCeEEecCCCCeEEEEhhHHHHHHhCCcccCCCceeecCCCCceEEEEeccCCCc--ceeCCCccCCCCCCCCCCCcc
Q 043442 206 RDGQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSFSSG--IVKVPDELVDDEHPLKYKPFE 283 (309)
Q Consensus 206 ~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t 283 (309)
++| |++|+|+||++|||+||+||+||||+||||+|||+.+ +.+|||++||++|+. +|.|+++++++++ ++|+++|
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t 312 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLS 312 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCB
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCcc
Confidence 999 9999999999999999999999999999999999965 689999999999998 9999999998887 8999999
Q ss_pred HHHHHHHHhcc
Q 043442 284 HFGLLRYFRTD 294 (309)
Q Consensus 284 ~~e~~~~~~~~ 294 (309)
++||+..+++.
T Consensus 313 ~~e~l~~~~~~ 323 (331)
T 1odm_A 313 YGDYLQNGLVS 323 (331)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=7.3e-72 Score=510.70 Aligned_cols=268 Identities=15% Similarity=0.183 Sum_probs=231.9
Q ss_pred CCCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCC-HHHHhhccCC--CC
Q 043442 2 LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLP-TETKMKNKYE--RP 78 (309)
Q Consensus 2 ~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~--~~ 78 (309)
.+||||||+.+ .+++. .++|.+||++||||||+||| |+.++++++++++++||+|| .|+|+++... ..
T Consensus 3 ~~iPvIDls~l--~~~~~-----~~~l~~A~~~~GFf~l~nHG--i~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~ 73 (311)
T 1dcs_A 3 TTVPTFSLAEL--QQGLH-----QDEFRRCLRDKGLFYLTDCG--LTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTM 73 (311)
T ss_dssp CCCCEEEHHHH--HTTCS-----HHHHHHHHHHTCEEEEESSS--CCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCS
T ss_pred CCCcEEEchhh--cCCCH-----HHHHHHHHHhCcEEEEECCC--CCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCC
Confidence 46999999974 33332 13999999999999999999 99999999999999999999 9999999765 36
Q ss_pred CceeecCCC-----------CCCccceeecCCCCChhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 043442 79 LTGYVGQIP-----------KLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESY 147 (309)
Q Consensus 79 ~~GY~~~~~-----------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~L 147 (309)
.+||.+.+. ..|++|.|.++.. +|.|| +++||+.+++|+++|.+++.+|+++|+++|
T Consensus 74 ~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~----------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~L 141 (311)
T 1dcs_A 74 RRGFTGLESESTAQITNTGSYSDYSMCYSMGTA----------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRAT 141 (311)
T ss_dssp SSEEEEC-----------------CEEEEECSS----------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceeeccccccccccCCCCCCCcceeeeccCC----------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 799987542 3478999998854 57899 999999999999999999999999999999
Q ss_pred CC----c-chhhhhhcccccceeeccccCCCCCC--C--CccccccccCCceeEEecC-CCCc---eeEEcCCCCeEEec
Q 043442 148 SL----E-KYHDSYIESITYLLRVLKNRAPIGGE--P--NLGFVTHTDKSFTTILHQN-QING---LEIDTRDGQKINVE 214 (309)
Q Consensus 148 gl----~-~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~~~~~HtD~~~lTlL~qd-~~~G---Lqv~~~~g~W~~V~ 214 (309)
|+ + ++|++. .+.||++||||++.++ + .+|+++|||+|+||||+|| +++| |||++ +|+|++|+
T Consensus 142 gl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~-~g~W~~V~ 216 (311)
T 1dcs_A 142 GTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEV-GGAFTDLP 216 (311)
T ss_dssp TCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEE-TTEEEECC
T ss_pred CCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEe-CCEEEeCc
Confidence 99 7 777654 6789999999987653 3 6789999999999999998 8999 99987 99999999
Q ss_pred CCCCeEEEEhhHHHHHHhCCcccCCCceeecCC-----CCceEEEEeccCCCc--ceeCCCccCCCCCCCCC--CCccHH
Q 043442 215 LSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNG-----AVDRYSLALFSFSSG--IVKVPDELVDDEHPLKY--KPFEHF 285 (309)
Q Consensus 215 p~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~-----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y--~~~t~~ 285 (309)
|+||++||||||+||+||||+||||+|||+.++ +++|||++||++|+. +|. +++|+++++|++| +++|++
T Consensus 217 p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ 295 (311)
T 1dcs_A 217 YRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQ 295 (311)
T ss_dssp CCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHH
T ss_pred CCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHH
Confidence 999999999999999999999999999999887 688999999999998 899 9999988899999 999999
Q ss_pred HHHHHHhcccc
Q 043442 286 GLLRYFRTDEG 296 (309)
Q Consensus 286 e~~~~~~~~~g 296 (309)
||+..+++...
T Consensus 296 ey~~~~~~~~~ 306 (311)
T 1dcs_A 296 DWIGGNYVNIR 306 (311)
T ss_dssp HHHCSSCCCEE
T ss_pred HHHHHHHHHHh
Confidence 99999887643
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=3.5e-69 Score=485.88 Aligned_cols=254 Identities=21% Similarity=0.281 Sum_probs=221.7
Q ss_pred CCCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCCCHHHHhhccCC-CCCc
Q 043442 2 LKLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDLPTETKMKNKYE-RPLT 80 (309)
Q Consensus 2 ~~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~ 80 (309)
++||||||+.. ..+++|.+||++||||||+||| |+.++++++++++++||++ |+|+++... ...+
T Consensus 2 ~~IPvIDls~~----------~~~~~l~~A~~~~GFF~v~nHG--i~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~ 67 (280)
T 3on7_A 2 MKLETIDYRAA----------DSAKRFVESLRETGFGVLSNHP--IDKELVERIYTEWQAFFNS--EAKNEFMFNRETHD 67 (280)
T ss_dssp --CCEEETTST----------THHHHHHHHHHHHSEEEEESCS--SCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCC
T ss_pred CCCCEEECCCh----------hHHHHHHHHHHhCCEEEEECCC--CCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCC
Confidence 57999999872 2578999999999999999999 9999999999999999998 789998654 4679
Q ss_pred eeecCC-C-------CCCccceeecCCCCChhHHhccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--
Q 043442 81 GYVGQI-P-------KLPLHESMGIDNATSLEAAQSFTKIMWPQGNDSFCKIVHSYATLAAELDRTVSRMIFESYSLE-- 150 (309)
Q Consensus 81 GY~~~~-~-------~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-- 150 (309)
||.+.+ . ..|++|.|.+. .||..+++||+.+++|+++|.+++.+|+++|+++||++
T Consensus 68 GY~~~~~~e~~~~~~~~D~kE~~~~~--------------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 133 (280)
T 3on7_A 68 GFFPASISETAKGHTVKDIKEYYHVY--------------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIK 133 (280)
T ss_dssp EEECCC--------CCCCSCEEEEEC--------------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred ccccCccccccCCCCcccHHHHHhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 998764 1 24778887653 47777899999999999999999999999999999986
Q ss_pred ch----hhhhhcccc-cceeeccccCCCCCC--CCccccccccCCceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEE
Q 043442 151 KY----HDSYIESIT-YLLRVLKNRAPIGGE--PNLGFVTHTDKSFTTILHQNQINGLEIDTRDGQKINVELSPSSFVVV 223 (309)
Q Consensus 151 ~~----~~~~~~~~~-~~lr~~~Yp~~~~~~--~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn 223 (309)
+. |.+++.++. +.||++||||++.++ ..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++|||
T Consensus 134 ~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVN 213 (280)
T 3on7_A 134 AKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIIN 213 (280)
T ss_dssp TTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEE
T ss_pred hhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEE
Confidence 22 455565554 899999999988643 57899999999999999999999999998999999999999999999
Q ss_pred hhHHHHHHhCCcccCCCceeecCC----CCceEEEEeccCCCc--ceeCCCccCCCCCCCCCCCccHHHHHHHHhccccc
Q 043442 224 AGDALMAWSNDRIHSPSHRVIMNG----AVDRYSLALFSFSSG--IVKVPDELVDDEHPLKYKPFEHFGLLRYFRTDEGY 297 (309)
Q Consensus 224 vGd~l~~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~g~ 297 (309)
+||+||+||||+||||+|||++++ ..+|||++||++|+. +|.| ++|++||+.+|++++|+
T Consensus 214 iGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~~l 279 (280)
T 3on7_A 214 IGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRELGV 279 (280)
T ss_dssp ECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHTTC
T ss_pred cChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHhcC
Confidence 999999999999999999999874 468999999999998 6653 58999999999999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.05 E-value=0.044 Score=47.32 Aligned_cols=79 Identities=20% Similarity=0.142 Sum_probs=53.6
Q ss_pred cceeeccccCCCCCCCCccccccccCC-----------ceeEEec--C----CCCceeEEcCCCCeEEecCCCCeEEEEh
Q 043442 162 YLLRVLKNRAPIGGEPNLGFVTHTDKS-----------FTTILHQ--N----QINGLEIDTRDGQKINVELSPSSFVVVA 224 (309)
Q Consensus 162 ~~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q--d----~~~GLqv~~~~g~W~~V~p~~g~~vVnv 224 (309)
.-+++++|.+. --..+|.|.. .+|+++. | ..|.|.+.+..+ =..|+|..|.+|+.-
T Consensus 99 e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~-~~~V~P~~G~~v~F~ 171 (243)
T 3dkq_A 99 YPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG-QQSIKLSAGSLVLYP 171 (243)
T ss_dssp EEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE-EEEECCCTTCEEEEE
T ss_pred ccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC-cEEEecCCCEEEEEC
Confidence 34889999763 2356676653 4555544 3 124476654433 367999999999974
Q ss_pred hHHHHHHhCCcccCCCceeecCCCCceEEEEeccC
Q 043442 225 GDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFSF 259 (309)
Q Consensus 225 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~ 259 (309)
. .++|+|.......|+++..+++
T Consensus 172 s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 172 S------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp T------------TSEEEECCEEEECEEEEEEEEE
T ss_pred C------------CCeEcCccccccCEEEEEEehh
Confidence 2 3699998765568999999876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.17 E-value=1.6 Score=36.58 Aligned_cols=42 Identities=19% Similarity=0.033 Sum_probs=33.5
Q ss_pred CCeEEecCCCCeEEEEhhHHHHHHhCCcccCCCceeecCC-CCceEEEEeccCCC
Q 043442 208 GQKINVELSPSSFVVVAGDALMAWSNDRIHSPSHRVIMNG-AVDRYSLALFSFSS 261 (309)
Q Consensus 208 g~W~~V~p~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~-~~~R~Si~~F~~P~ 261 (309)
..+..|.|.+|.+||.-+. -.|.|.... +.+|+||+|-+.|.
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~ 208 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWG 208 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC-
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecC
Confidence 3577999999999998763 489998764 46899999988765
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=86.59 E-value=1.3 Score=38.02 Aligned_cols=82 Identities=20% Similarity=0.195 Sum_probs=55.3
Q ss_pred ceeeccccCCCCCCCCccccccccCC-----ceeEEec--C-C-----CCceeEEcCCC-CeEEecCCCCeEEEEhhHHH
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDKS-----FTTILHQ--N-Q-----INGLEIDTRDG-QKINVELSPSSFVVVAGDAL 228 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~~-----~lTlL~q--d-~-----~~GLqv~~~~g-~W~~V~p~~g~~vVnvGd~l 228 (309)
-+.+.+|++. .-....|.|.. .+|+++. + . .|-|.+++.++ ....|.|..|.+|+.-.+
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-- 190 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-- 190 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS--
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC--
Confidence 3667888751 13466777762 5777764 2 1 34477765433 578999999999988642
Q ss_pred HHHhCCcccCCCceeecCCCCceEEEEeccCC
Q 043442 229 MAWSNDRIHSPSHRVIMNGAVDRYSLALFSFS 260 (309)
Q Consensus 229 ~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P 260 (309)
. -.+|.|... ...|+||...++-
T Consensus 191 -----~---~~~H~V~p~-~~~R~sit~W~~~ 213 (247)
T 2hbt_A 191 -----R---RNPHEVQPA-YATRYAITVWYFD 213 (247)
T ss_dssp -----T---TCCEEECCB-SSCEEEEEEEEEE
T ss_pred -----C---CceeeeccC-CCEEEEEEEEEcC
Confidence 1 169999764 5789999886653
No 10
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=83.34 E-value=3.4 Score=34.66 Aligned_cols=84 Identities=11% Similarity=0.030 Sum_probs=51.5
Q ss_pred ceeeccccCCCCCCCCccccccccCC-----------ceeEEec--CC-CCc-eeEEcCCCCeEEecCCCCeEEEEhhHH
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDKS-----------FTTILHQ--NQ-ING-LEIDTRDGQKINVELSPSSFVVVAGDA 227 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~~-----------~lTlL~q--d~-~~G-Lqv~~~~g~W~~V~p~~g~~vVnvGd~ 227 (309)
.+++++|.+.. ...+|.|+. .+|+++- |. .|| +.. ++. =+.|.|..|.+++.-.-
T Consensus 112 ~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~F--p~~-~~~V~P~~G~al~f~~~- 181 (216)
T 3itq_A 112 GLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFF--PKL-NLSVHPRKGMAVYFEYF- 181 (216)
T ss_dssp CCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEE--TTT-TEEECCCTTCEEEEECC-
T ss_pred ceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEe--cCC-CCEEecCCCeEEEEecc-
Confidence 57888897632 245676653 3677765 22 233 443 222 27899999988875430
Q ss_pred HHHHhCCc-ccCCCceeecCCCCceEEEEeccC
Q 043442 228 LMAWSNDR-IHSPSHRVIMNGAVDRYSLALFSF 259 (309)
Q Consensus 228 l~~~TnG~-~ks~~HRV~~~~~~~R~Si~~F~~ 259 (309)
..+|. -..++|+|.......|+++..+++
T Consensus 182 ---~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 182 ---YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp ---CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred ---CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 01111 146899997655458999988765
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=82.71 E-value=2.3 Score=35.72 Aligned_cols=88 Identities=13% Similarity=0.070 Sum_probs=54.0
Q ss_pred ceeeccccCCCCCCCCccccccccC--------------CceeEEec--CC-C-CceeEEcCC-----C-------CeEE
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDK--------------SFTTILHQ--NQ-I-NGLEIDTRD-----G-------QKIN 212 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~--------------~~lTlL~q--d~-~-~GLqv~~~~-----g-------~W~~ 212 (309)
-+++++|.+.. ...+|.|. ..+|+|+- |. . |.+.+...+ . .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47888897632 24566664 24777754 32 2 335542211 1 1489
Q ss_pred ecCCCCeEEEEhhHHHHHHhCCcc-cCCCceeecCCCCceEEEEeccCC
Q 043442 213 VELSPSSFVVVAGDALMAWSNDRI-HSPSHRVIMNGAVDRYSLALFSFS 260 (309)
Q Consensus 213 V~p~~g~~vVnvGd~l~~~TnG~~-ks~~HRV~~~~~~~R~Si~~F~~P 260 (309)
|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999998887642 0123333 578999976644589999988764
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=82.62 E-value=4 Score=34.71 Aligned_cols=84 Identities=12% Similarity=0.215 Sum_probs=54.0
Q ss_pred ceeeccccCCCCCCCCccccccccCC--------ceeEEecCCCCceeEEcCC----------CCeEEecCCCCeEEEEh
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDKS--------FTTILHQNQINGLEIDTRD----------GQKINVELSPSSFVVVA 224 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~qd~~~GLqv~~~~----------g~W~~V~p~~g~~vVnv 224 (309)
.+-+|+|.+. .-++++|.|-. +.|+-+. ...=+.+.... +..+.+...+|+++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG-~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG-ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE-SCEEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC-CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4568899753 23788998852 3333332 11223332221 46899999999999999
Q ss_pred hHHHHHHhCCcccCCCceeecCCCCceEEEEecc
Q 043442 225 GDALMAWSNDRIHSPSHRVIMNGAVDRYSLALFS 258 (309)
Q Consensus 225 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~ 258 (309)
|++=..|..|.-+.. .....|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 998878876654422 1246899999854
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=80.35 E-value=3 Score=37.67 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=62.5
Q ss_pred cceeeccccCCCCCCCCccccccccCC------ceeEEecCCCCceeEEcCCCCeEEecCCCCeEEEEhhHHHHHHhCCc
Q 043442 162 YLLRVLKNRAPIGGEPNLGFVTHTDKS------FTTILHQNQINGLEIDTRDGQKINVELSPSSFVVVAGDALMAWSNDR 235 (309)
Q Consensus 162 ~~lr~~~Yp~~~~~~~~~~~~~HtD~~------~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVnvGd~l~~~TnG~ 235 (309)
..+-+++|.+. .++++|.|-. +.|+-+. ...-+.+..++|.++.+...+|+++|.-|++-..|..|.
T Consensus 198 n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 198 DQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp SEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred CEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 35668889652 2899999984 3333332 223455555567899999999999999999999998777
Q ss_pred ccCCCceeec------------------CCCCceEEEEeccCCC
Q 043442 236 IHSPSHRVIM------------------NGAVDRYSLALFSFSS 261 (309)
Q Consensus 236 ~ks~~HRV~~------------------~~~~~R~Si~~F~~P~ 261 (309)
-+-...-+-. .....|+|+.|=.-++
T Consensus 271 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~ 314 (345)
T 3tht_A 271 TCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQ 314 (345)
T ss_dssp CCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCS
T ss_pred CcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCC
Confidence 6644433211 0124699999966444
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=73.63 E-value=9.5 Score=31.52 Aligned_cols=83 Identities=8% Similarity=0.130 Sum_probs=51.3
Q ss_pred ceeeccccCCCCCCCCccccccccCC--------ceeEEecCCCCceeEEcC---------CCCeEEecCCCCeEEEEhh
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDKS--------FTTILHQNQINGLEIDTR---------DGQKINVELSPSSFVVVAG 225 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~~--------~lTlL~qd~~~GLqv~~~---------~g~W~~V~p~~g~~vVnvG 225 (309)
.+-+|+|.+. .-++++|.|-. +.++-+. ...-+.+..+ .+..+.+...+|+++|.-|
T Consensus 101 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCC-----CCcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 4568889753 23788998862 2233332 1122333221 2357889999999999999
Q ss_pred HHHHHHhCCcccCCCceeecCCCCceEEEEec
Q 043442 226 DALMAWSNDRIHSPSHRVIMNGAVDRYSLALF 257 (309)
Q Consensus 226 d~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F 257 (309)
++=..|..|.-+... ....|+|+.|-
T Consensus 175 ~~q~~w~H~Ip~~~~------~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWYHSLPVRKK------VLAPRVNLTFR 200 (204)
T ss_dssp THHHHEEEEECCCTT------CCSCEEEEEEE
T ss_pred hhhheeEeeccccCC------CCCCEEEEEee
Confidence 987778654333211 23679999883
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=67.91 E-value=17 Score=30.22 Aligned_cols=79 Identities=16% Similarity=0.134 Sum_probs=50.1
Q ss_pred ceeeccccCCCCCCCCccccccccC-----C--ceeEEecCCCCceeEEc--CCCCeEEecCCCCeEEEEhhHHHHHHhC
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDK-----S--FTTILHQNQINGLEIDT--RDGQKINVELSPSSFVVVAGDALMAWSN 233 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~-----~--~lTlL~qd~~~GLqv~~--~~g~W~~V~p~~g~~vVnvGd~l~~~Tn 233 (309)
.+-+|+|.+ +. ++++|.|- + ++++-+. ...-+.+.. +++..+.+...+|+++|.-|++ +
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r---- 173 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-R---- 173 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-T----
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchH-H----
Confidence 466888965 23 89999993 2 2333332 122344432 2356899999999999998875 1
Q ss_pred CcccCCCceeecCCC-------CceEEEEec
Q 043442 234 DRIHSPSHRVIMNGA-------VDRYSLALF 257 (309)
Q Consensus 234 G~~ks~~HRV~~~~~-------~~R~Si~~F 257 (309)
+ -.|.|..... ..|+|+.|-
T Consensus 174 --~--~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 174 --L--FYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp --T--CCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred --c--eEeccCcccCCcCCCCCCCEEEEEee
Confidence 1 2577765432 359999984
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=45.93 E-value=7.3 Score=36.37 Aligned_cols=52 Identities=19% Similarity=0.383 Sum_probs=38.0
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFD 64 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~ 64 (309)
-||.||++++ ..+. +.++..+.+++.|++.|+|. ||.+...+..+...+|.+
T Consensus 100 ~iP~i~f~di--~~~~-----~s~~~~~~ir~rG~vVIRgv---vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 100 VWPVLSYADI--KAGH-----VTAEQREQIKRRGCAVIKGH---FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp SSCEEEHHHH--HHTC-----CCHHHHHHHHHHSEEEEETS---SCHHHHHHHHHHHHHHHH
T ss_pred CcceecHHHh--cCCC-----CCHHHHHHHHhccEEEECCC---CCHHHHHHHHHHHHHHHH
Confidence 5999999873 2221 22445577889999999875 788888888888887754
No 17
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=43.77 E-value=12 Score=30.97 Aligned_cols=35 Identities=14% Similarity=0.375 Sum_probs=27.5
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNH 44 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG 44 (309)
.||++++... ++. ++++.+.+++.+.-.+.|.|||
T Consensus 125 ~v~~~~y~~~----g~~---~la~~i~~~l~~~~avll~nHG 159 (212)
T 2opi_A 125 EIPVIPYYRP----GSP---ELAKAVVEAMLKHNSVLLTNHG 159 (212)
T ss_dssp CCCEECCCCT----TCH---HHHHHHHHHTSSCSEEEETTTE
T ss_pred CeEEEcCCCC----CcH---HHHHHHHHHhccCCEEEEcCCC
Confidence 5899988652 232 5788889999888889999999
No 18
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=37.12 E-value=33 Score=19.02 Aligned_cols=17 Identities=18% Similarity=0.172 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHhccEEE
Q 043442 23 KACNDVRQALEEFGCFI 39 (309)
Q Consensus 23 ~~~~~l~~A~~~~Gff~ 39 (309)
.+++.+.-.|.+-|||+
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 58889999999999998
No 19
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=36.64 E-value=16 Score=30.19 Aligned_cols=35 Identities=17% Similarity=0.321 Sum_probs=27.0
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNH 44 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG 44 (309)
.||++++..+ ++. ++++.+.+++.+.-.+.|.|||
T Consensus 122 ~ip~~~y~~~----g~~---~la~~i~~~l~~~~avll~nHG 156 (215)
T 1e4c_P 122 SIPCAPYATF----GTR---ELSEHVALALKNRKATLLQHHG 156 (215)
T ss_dssp CBCEECCCCT----TCH---HHHHHHHHHTSSCSEEEETTTE
T ss_pred CcceeeCCCC----CcH---HHHHHHHHHhccCCEEEEcCCC
Confidence 5888887642 232 5778888999888889999999
No 20
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=35.36 E-value=20 Score=30.09 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=27.1
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNH 44 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG 44 (309)
.||++++... ++. ++++++.+++.+.-.+.+.|||
T Consensus 161 ~v~~~~y~~~----g~~---ela~~i~~~l~~~~avll~nHG 195 (238)
T 1pvt_A 161 GISVVEFEKP----GSV---ELGLKTVEKSEGKDAVLWDKHG 195 (238)
T ss_dssp CCEEECCCST----TCH---HHHHHHHHHTSSCSEEEETTSC
T ss_pred CceEecCCCC----CcH---HHHHHHHHHhccCCEEEEcCCC
Confidence 5888888642 332 5778888899888889999999
No 21
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=35.11 E-value=15 Score=33.51 Aligned_cols=52 Identities=21% Similarity=0.169 Sum_probs=37.6
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcCC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFDL 65 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~l 65 (309)
++|.||++.+ +. + .+.+.++.+|+.++|++.+.|-. +..+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~-l~-~----d~~~~~~~~~l~~~Gvv~frg~~--~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDV-LR-Y----DEHAYKWLSTLKKVGIVRLTGAS--DKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHH-HH-C----HHHHHHHHHHHHHHSEEEEECCC--SSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHH-hc-C----HHHHHHHHHHHHhcCEEEEeCCC--CCHH---HHHHHHHHhCCC
Confidence 5788888763 21 1 25788999999999999999988 7744 344566776544
No 22
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=32.85 E-value=22 Score=29.12 Aligned_cols=53 Identities=23% Similarity=0.312 Sum_probs=34.4
Q ss_pred CCCEE-ECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCCC------CCCHHHHHHHHHHHHHh
Q 043442 3 KLPVV-DFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNHN------LISSEFRSEVFGALKNL 62 (309)
Q Consensus 3 ~iPvI-Dl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG~------~i~~~~~~~~~~~~~~f 62 (309)
.||++ ++... ++. ++++.+.+++.+.-.+.|.|||- +.+.+.+++++..+..+
T Consensus 117 ~ip~~~~y~~~----g~~---ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVS----ATE---EAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCS----SSH---HHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC----CcH---HHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 57888 66542 232 57788888888888899999992 11124566666655543
No 23
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=31.09 E-value=1.2e+02 Score=26.67 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhccEEEEEeCC--CCCCHHHHHHHHHHHHHhcC
Q 043442 23 KACNDVRQALEEFGCFIIECNH--NLISSEFRSEVFGALKNLFD 64 (309)
Q Consensus 23 ~~~~~l~~A~~~~Gff~l~nhG--~~i~~~~~~~~~~~~~~fF~ 64 (309)
++.+++.+.++.-||+.=-+|| ..+|.+-++.+.+++++|++
T Consensus 305 ~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 305 KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4556667777788886656788 12356899999999999975
No 24
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=29.24 E-value=21 Score=30.80 Aligned_cols=35 Identities=11% Similarity=0.246 Sum_probs=26.9
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNH 44 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG 44 (309)
.||++++.. .++. ++++.+.+++.+.-.+.+.|||
T Consensus 179 ~v~v~~y~~----~g~~---ela~~i~~~l~~~~avll~nHG 213 (274)
T 2v9l_A 179 GVGILPWMV----PGTD---AIGQATAQEMQKHSLVLWPFHG 213 (274)
T ss_dssp CEEECCCCC----SSSH---HHHHHHHHHHTTCSEEEETTTE
T ss_pred ceeEecCCC----CCCH---HHHHHHHHHHccCCEEEEcCCC
Confidence 478887753 2333 5788889999888899999999
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=29.17 E-value=21 Score=29.31 Aligned_cols=23 Identities=13% Similarity=0.146 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhcc---EEEEEeCC
Q 043442 22 IKACNDVRQALEEFG---CFIIECNH 44 (309)
Q Consensus 22 ~~~~~~l~~A~~~~G---ff~l~nhG 44 (309)
+++++.+.+++.+.+ .+.|.|||
T Consensus 150 ~~La~~i~~~l~~~~~~~avll~nHG 175 (208)
T 2irp_A 150 PLLAKEVENYFKTSEDKYGFLIRGHG 175 (208)
T ss_dssp HHHHHHHHHHHHHCSCCSCEEETTTE
T ss_pred HHHHHHHHHHHhcCCCceEEEEcCCC
Confidence 467888888888765 78899999
No 26
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=27.77 E-value=56 Score=28.50 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=43.2
Q ss_pred ceeeccccCCCCCCCCccccccccC--------CceeEEec-CCCCceeEEcCCCCeEEecCCCCeE-EEEhhHHHHHHh
Q 043442 163 LLRVLKNRAPIGGEPNLGFVTHTDK--------SFTTILHQ-NQINGLEIDTRDGQKINVELSPSSF-VVVAGDALMAWS 232 (309)
Q Consensus 163 ~lr~~~Yp~~~~~~~~~~~~~HtD~--------~~lTlL~q-d~~~GLqv~~~~g~W~~V~p~~g~~-vVnvGd~l~~~T 232 (309)
..|+ +-+|. ..+.+|.|. +.+.+... ...+|.... -+|+-+.. .+|.. ++|.
T Consensus 93 ~vRl-rL~PG------~~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~-vdg~~~~m--~~GE~w~~d~-------- 154 (290)
T 1e5r_A 93 MARS-RNLKN------AIVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHS-NEDTVIHM--RPGEIWFLDA-------- 154 (290)
T ss_dssp EEEE-EEEES------EEEEEECCC--------CBCCEEEECSCCTTEEEE-ETTEEECC--CTTEEEECCT--------
T ss_pred eEEE-EeCCC------CEeeCccCccccccccCCceEEEeeEecCCCcEEE-ECCEEEec--CCCCEEEEcC--------
Confidence 4556 55442 368899998 33444433 134555552 35533333 33533 3332
Q ss_pred CCcccCCCceeecCCCCceEEEEecc
Q 043442 233 NDRIHSPSHRVIMNGAVDRYSLALFS 258 (309)
Q Consensus 233 nG~~ks~~HRV~~~~~~~R~Si~~F~ 258 (309)
+..|.|.+.++.+|+.+.+=+
T Consensus 155 -----~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 155 -----ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp -----TSCEEEEESSSSCCCEEEEEE
T ss_pred -----CCeeEEEcCCCCCeEEEEEEe
Confidence 358999999999999998765
No 27
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=27.35 E-value=37 Score=29.04 Aligned_cols=37 Identities=5% Similarity=0.067 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhccEEEEEeCCCCCCHHHHHHHHHHHHHhcC
Q 043442 23 KACNDVRQALEEFGCFIIECNHNLISSEFRSEVFGALKNLFD 64 (309)
Q Consensus 23 ~~~~~l~~A~~~~Gff~l~nhG~~i~~~~~~~~~~~~~~fF~ 64 (309)
+..++|.+++.++|++.+.|-. ++.+.. .+.++.|-.
T Consensus 30 ~~~~~l~~~l~~~Gvv~frg~~--~~~~~~---~~~~~~~G~ 66 (283)
T 1otj_A 30 NQFEQLYHAVLRHQVVFLRDQA--ITPQQQ---RALAQRFGE 66 (283)
T ss_dssp HHHHHHHHHHHHHSEEEECSCC--CCHHHH---HHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCC--CCHHHH---HHHHHHhCC
Confidence 4688999999999999999988 876543 445566543
No 28
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=23.60 E-value=1.2e+02 Score=29.45 Aligned_cols=80 Identities=10% Similarity=-0.008 Sum_probs=50.8
Q ss_pred eeeccccCCCCCCCCccccccccC-C--ceeEEec----C------CCCceeEEcCC------C-CeEEecCCCCeEEEE
Q 043442 164 LRVLKNRAPIGGEPNLGFVTHTDK-S--FTTILHQ----N------QINGLEIDTRD------G-QKINVELSPSSFVVV 223 (309)
Q Consensus 164 lr~~~Yp~~~~~~~~~~~~~HtD~-~--~lTlL~q----d------~~~GLqv~~~~------g-~W~~V~p~~g~~vVn 223 (309)
+-+.+|++. -....|.|. + .+|+++- | ..|-|++++.+ + ....|.|..|.+++.
T Consensus 126 ~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 556677653 357788884 2 3555542 2 23458887643 2 477899999999987
Q ss_pred hhHHHHHHhC-CcccCCCceeecC-CCCceEEEEeccC
Q 043442 224 AGDALMAWSN-DRIHSPSHRVIMN-GAVDRYSLALFSF 259 (309)
Q Consensus 224 vGd~l~~~Tn-G~~ks~~HRV~~~-~~~~R~Si~~F~~ 259 (309)
.- . + ...|.|... .++.|+||+-.++
T Consensus 200 ~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 200 KV-------LPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp EC-------CTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred Ec-------CCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 42 1 1 257876432 2688999987664
No 29
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=23.07 E-value=1.7e+02 Score=24.02 Aligned_cols=40 Identities=8% Similarity=0.066 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHhccEEEEEe-CCCCCCHHHHHHHHHHHHH
Q 043442 20 SWIKACNDVRQALEEFGCFIIEC-NHNLISSEFRSEVFGALKN 61 (309)
Q Consensus 20 ~~~~~~~~l~~A~~~~Gff~l~n-hG~~i~~~~~~~~~~~~~~ 61 (309)
.+.+.+++|.+.+.++..++|++ +| ++...++++....++
T Consensus 4 ~K~~~v~el~e~l~~~~~v~v~~~~g--l~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 4 WKIEEVKTLKGLIKSKPVVAIVDMMD--VPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCS--CCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEcCC--CCHHHHHHHHHHHhC
Confidence 35678899999999998888876 78 888888877776664
No 30
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=21.14 E-value=39 Score=29.10 Aligned_cols=36 Identities=6% Similarity=0.057 Sum_probs=26.7
Q ss_pred CCCEEECCCCCCCCCchhHHHHHHHHHHHHHhccEEEEEeCC
Q 043442 3 KLPVVDFSNKDLKPGTNSWIKACNDVRQALEEFGCFIIECNH 44 (309)
Q Consensus 3 ~iPvIDl~~~~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhG 44 (309)
.||++|+..+ ..+. ++.+.+.+++.+.-.+.|.|||
T Consensus 156 ~v~~~~y~~~---~~~~---el~~~i~~~l~~~~avlL~nHG 191 (273)
T 3ocr_A 156 RVAYHGYEGI---ALDL---SERERLVADLGDKSVMILRNHG 191 (273)
T ss_dssp TEEEECCCCS---SCCH---HHHHHHHHHHTTCSEEEETTTE
T ss_pred CEEEECCCCC---CCCH---HHHHHHHHHhCcCCEEEEcCCc
Confidence 4788887652 1122 4677888888888899999999
Done!