BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043443
(299 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 208/290 (71%), Positives = 230/290 (79%), Gaps = 5/290 (1%)
Query: 10 VFLVQEGSAMRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNI 69
+F S MRRYSPPYYS PRRGYGGR RSPPRRGYGG G RRKEQNHGSLLVRNI
Sbjct: 69 IFQKNFKSIMRRYSPPYYSAPRRGYGGRERSPPRRGYGGYG----RRKEQNHGSLLVRNI 124
Query: 70 PLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFA 129
PL+CRPE+LR PFERFG+VRDVYLPKDYYTGEPRGFAFVQFVDPYEA+EAQ+HMNG+ FA
Sbjct: 125 PLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFA 184
Query: 130 GREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSR 189
GREISVV+AAE+RKRPEEMR R R RG SSYGG RSSYYG RSRS+SRSRSP
Sbjct: 185 GREISVVVAAETRKRPEEMRTRARVRGPSSYGGRRSSYYGGSRSRSVSRSRSPPRLLSGS 244
Query: 190 SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRR 249
RYRSRSY+PVPR+ DYS+SPRRR +EHP SPR P ER ++ RRSYSPGYDD+AD+
Sbjct: 245 RRYRSRSYSPVPRRRGDYSVSPRRR-VEHPRSPRDHPPERDGDHIRRSYSPGYDDAADQN 303
Query: 250 NPNGNGYGEKSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSPRHTR 299
+ GNGY EKS YE +A R P S S S SRSRSAD+SPRH+R
Sbjct: 304 HHTGNGYLEKSAYEPDEARDRRRSPPPRRVSRSLSGSRSRSADVSPRHSR 353
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 206/281 (73%), Positives = 227/281 (80%), Gaps = 5/281 (1%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPYYS PRRGYGGR RSPPRRGYGG G RRKEQNHGSLLVRNIPL+CRPE+L
Sbjct: 1 MRRYSPPYYSAPRRGYGGRERSPPRRGYGGYG----RRKEQNHGSLLVRNIPLNCRPEDL 56
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG+VRDVYLPKDYYTGEPRGFAFVQFVDPYEA+EAQ+HMNG+ FAGREISVV+A
Sbjct: 57 RVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISVVVA 116
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AE+RKRPEEMR R R RG SSYGG RSSYYG RSRS+SRSRSP RYRSRSY+
Sbjct: 117 AETRKRPEEMRTRARVRGPSSYGGRRSSYYGGSRSRSVSRSRSPPRLLSGSRRYRSRSYS 176
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGE 258
PVPR+ DYS+SPRRR +EHP SPR P ER ++ RRSYSPGYDD+AD+ + GNGY E
Sbjct: 177 PVPRRRGDYSVSPRRR-VEHPRSPRDHPPERDGDHIRRSYSPGYDDAADQNHHTGNGYLE 235
Query: 259 KSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSPRHTR 299
KS YE +A R P S S S SRSRSAD+SPRH+R
Sbjct: 236 KSAYEPDEARDRRRSPPPRRVSRSLSGSRSRSADVSPRHSR 276
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 203/279 (72%), Positives = 224/279 (80%), Gaps = 17/279 (6%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRK---------EQNHGSLLVRNI 69
MRRYSPPY+SPPRRGYGGRGRSPP RGYGGGGGG G EQ HGSLLVRNI
Sbjct: 1 MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGGGYGRRREQPHGSLLVRNI 60
Query: 70 PLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFA 129
P+DCRPEELRAPFERFG+VRDVY+PKDYYTGEPRGFAFV+FVDPYEA+EAQ+HMNGK+FA
Sbjct: 61 PMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFA 120
Query: 130 GREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSR 189
GREI+VVLAAESRKRPE+MRQR R RG S YGG R S+YGR RSRS+SRSRSP HP GSR
Sbjct: 121 GREITVVLAAESRKRPEQMRQRSR-RGPSGYGG-RRSHYGRSRSRSVSRSRSPRHPSGSR 178
Query: 190 SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRR 249
SRYRSRSY+P PR DYS+SP RRH ++P SPRG P+ER E SR+ YSPGYD+ AD
Sbjct: 179 SRYRSRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDN-ADEH 237
Query: 250 NPNGNGYGEKSGYEETQAH----WRSPPPRGVSRSPSGS 284
NGNGY +KS E Q H WR+ P R SRSPSGS
Sbjct: 238 GQNGNGYHDKSPSVEHQDHLRVNWRASPGR-TSRSPSGS 275
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 266 bits (680), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 210/292 (71%), Positives = 231/292 (79%), Gaps = 17/292 (5%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRK-------EQNHGSLLVRNIPL 71
MRRYSPPY+SPPRRGYGGRGRSPP RGYGGGGGG G EQ HGSLLVRNIP+
Sbjct: 1 MRRYSPPYHSPPRRGYGGRGRSPPGRGYGGGGGGGGGGGGGYGRRREQPHGSLLVRNIPM 60
Query: 72 DCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGR 131
DCRPEELRAPFERFG+VRDVY+PKDYYTGEPRGFAFV+FVDPYEA+EAQ+HMNGK+FAGR
Sbjct: 61 DCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYHMNGKKFAGR 120
Query: 132 EISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSR 191
EI+VVLAAESRKRPE+MRQR R RG S YGG R S+YGR RSRS+SRSRSP HP GSRSR
Sbjct: 121 EITVVLAAESRKRPEQMRQRSR-RGPSGYGG-RRSHYGRSRSRSVSRSRSPRHPSGSRSR 178
Query: 192 YRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNP 251
YRSRSY+P PR DYS+SP RRH ++P SPRG P+ER E SR+ YSPGYD+ AD
Sbjct: 179 YRSRSYSPAPRWRGDYSVSPGRRHTDYPESPRGAPRERDVERSRQVYSPGYDN-ADEHGQ 237
Query: 252 NGNGYGEKSGYEETQAH----WRSPPPRGVSRSPSGSRSRSRSADLSPRHTR 299
NGNGY +KS E Q H WR+ P S S S SRSRSAD SPRH R
Sbjct: 238 NGNGYHDKSPSVEHQDHLRVNWRASP---GRTSRSPSGSRSRSADASPRHGR 286
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 250 bits (638), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 166/257 (64%), Positives = 196/257 (76%), Gaps = 12/257 (4%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRR SP YYSPPRRGYGG GR G G G G R+ ++GSLLVRNIPLDCRPEEL
Sbjct: 1 MRRNSPAYYSPPRRGYGGGGRG----GGSGRRGFGGGRRRDSNGSLLVRNIPLDCRPEEL 56
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVY+PKDYY+GEPRGFAFVQFVDPY+A+EAQ+HMN + FAGREISVV+A
Sbjct: 57 RVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYHMNRQIFAGREISVVVA 116
Query: 139 AESRKRPEEMRQR-HRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSY 197
E+RKRPEEMR R RFRG +SYGG RSS+YGR RSRS++RSRSP + GSR+RYRSRSY
Sbjct: 117 EETRKRPEEMRHRTSRFRGPASYGGRRSSHYGRSRSRSITRSRSPPYHSGSRNRYRSRSY 176
Query: 198 TPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYG 257
+P PR+ DYS+SP R EHP SPRGPP+E+ + RRSYSP Y + ++ NGY
Sbjct: 177 SPAPRRQSDYSVSP-GRQAEHPRSPRGPPREKDGDQKRRSYSPAYGNGIEQN--QSNGYA 233
Query: 258 EKSGY----EETQAHWR 270
EKS Y + ++ W+
Sbjct: 234 EKSMYKSEADADRSQWK 250
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 174/218 (79%), Gaps = 6/218 (2%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+QN GSLLVRNIPLDCRP+ELR PFERFGVVRDVY+PKDYYTGEPRGFAFVQFVDPYEA
Sbjct: 1 KDQNSGSLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEA 60
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSL 176
EAQH MNG+ FAGR+ISVVLAAE+RKRPEEMR R R RG SS+GG RSS YGR RSRSL
Sbjct: 61 MEAQHRMNGQIFAGRQISVVLAAETRKRPEEMRHRARVRGPSSHGG-RSSNYGRSRSRSL 119
Query: 177 SRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRR 236
SRS H SRSRYRSRSY+P PR+ DYS SP RRH HPGSPRGPP ER ++SRR
Sbjct: 120 SRSPR--HYPSSRSRYRSRSYSPAPRR-RDYSASPDRRHAGHPGSPRGPPPERDGDHSRR 176
Query: 237 SYSPGYDDSADRRNPNGNGYGEKSGYEETQAH-WRSPP 273
SYSP Y D N NGNG+GEKS Y+ +A WR P
Sbjct: 177 SYSPAY-GHGDGLNENGNGFGEKSAYDFEEARAWRPSP 213
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 169/214 (78%), Gaps = 6/214 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
++GSLLVRNIPLDCRPEELR PFERFG VRDVY+PKDYY+GEPRGFAFVQFVDPY+A+EA
Sbjct: 45 SNGSLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEA 104
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH-RFRGGSSYGGPRSSYYGRYRSRSLSR 178
Q+HMN + FAGREISVV+A E+RKRPEEMR R R RG + YGG RSS YGR RSRS++R
Sbjct: 105 QYHMNRQIFAGREISVVVAEETRKRPEEMRHRTSRLRGPAGYGGQRSSRYGRSRSRSVTR 164
Query: 179 SRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSY 238
SRSP + GSR+RYRSRSY+P PR+ DYS+SP RR EHP SPRGPP+ER E RRSY
Sbjct: 165 SRSPPYHSGSRNRYRSRSYSPAPRRQSDYSVSP-RRQAEHPRSPRGPPRERDGEQKRRSY 223
Query: 239 SPGYDDSADRRNPNGNGYGEKSGY--EETQAHWR 270
SP Y + ++ NGY EKS Y + + W+
Sbjct: 224 SPAYGNGIEQN--QSNGYAEKSMYKSDADRGQWK 255
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 187/224 (83%), Gaps = 5/224 (2%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPYYSPPRRGYGGRGRSPPRRG+GGGGG GRRKEQNHGSLLVRNIPLDCRPEEL
Sbjct: 1 MRRYSPPYYSPPRRGYGGRGRSPPRRGHGGGGGY-GRRKEQNHGSLLVRNIPLDCRPEEL 59
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
RAPFERFGVVRDVY+PKDYYTGEPRGFAFVQFVD Y+A EAQH MNG+ FAGREISVV+A
Sbjct: 60 RAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHRMNGQIFAGREISVVVA 119
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AE+RKRPEEMRQR R S YGG RSSYYGR RSRSLS S H GSRSRYRSRS++
Sbjct: 120 AETRKRPEEMRQRSRIGRPSGYGG-RSSYYGRSRSRSLSHSPR--HHLGSRSRYRSRSFS 176
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGY 242
P PR+ DYS SP RRH +H SP G P R ++ RSYSPGY
Sbjct: 177 PAPRR-RDYSASPGRRHADHARSPSGLPPGRDGDHIHRSYSPGY 219
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 163/260 (62%), Positives = 186/260 (71%), Gaps = 15/260 (5%)
Query: 1 AKSSLLSSLVFLVQEGSAMRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQN 60
A++ LS + MRRYSPPY SPPRRGYGGRGRSPPRRGYGG RKEQ
Sbjct: 22 ARAERLSRKEEVAVAYKTMRRYSPPYRSPPRRGYGGRGRSPPRRGYGG-------RKEQG 74
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
GSLLVRNIPL CR E+LR PFERFG VRDVYLPKDYYTGEPRGFAFV+FVDPY+A+EAQ
Sbjct: 75 SGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQ 134
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSR 180
+HMN + GREI+VVLAAESRKRPEEMR R R RG S + G RSS+YGR RSRS SRS
Sbjct: 135 YHMNRQVVFGREITVVLAAESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSRSRS- 193
Query: 181 SPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSP 240
R R RSRSY+P PR+ +DYS SP+R+ SPR P+E + RRSYSP
Sbjct: 194 -----PRYRGRPRSRSYSPAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSP 248
Query: 241 GYDDSADRRNPNGNGYGEKS 260
D DRR+ + NGY ++S
Sbjct: 249 ANKD-GDRRDAD-NGYEKRS 266
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 164/258 (63%), Positives = 186/258 (72%), Gaps = 18/258 (6%)
Query: 18 AMRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEE 77
MRRYSPPY SPPRRGYGGRGRSPPRRGYGG RKEQ GSLLVRNIPL CR E+
Sbjct: 24 TMRRYSPPYRSPPRRGYGGRGRSPPRRGYGG-------RKEQGSGSLLVRNIPLSCRAED 76
Query: 78 LRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVL 137
LR PFERFG VRDVYLPKDYYTGEPRGFAFV+FVDPY+A+EAQ+HMN + GREI+VVL
Sbjct: 77 LRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVL 136
Query: 138 AAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSY 197
AAESRKRPEEMR R R RG S + G RSS+YGR RSRS SRS R R RSRSY
Sbjct: 137 AAESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSRSRS------PRYRGRPRSRSY 190
Query: 198 TPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYG 257
+P PR+ +DYS SP+R+ SPR P+E + RRSYSP D DRR+ + NGY
Sbjct: 191 SPAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPANKD-GDRRDAD-NGYE 248
Query: 258 EKSGYEETQA---HWRSP 272
++S ++ H RSP
Sbjct: 249 KRSPPADSDGSPPHRRSP 266
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 181/281 (64%), Positives = 206/281 (73%), Gaps = 9/281 (3%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPP+YS PRRG+GGRGRSPPRRG GGGGG YGR K+Q+ GSLLVRNIP DCRPEEL
Sbjct: 1 MRRYSPPHYSSPRRGHGGRGRSPPRRGRGGGGGRYGRSKDQDSGSLLVRNIPRDCRPEEL 60
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R FERFGVVRDVY+PKDY+TGEPRGF FVQFV+P +A EAQHHMNG+ FAGR++ VV+A
Sbjct: 61 RGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAMEAQHHMNGQVFAGRQMFVVVA 120
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AE+RKRPEEMR R R RG + +GG S RSRS S SRSP H SRSRY RSY+
Sbjct: 121 AETRKRPEEMRHRTRVRGPADHGGRSSY---SRRSRSRSFSRSPRHYHVSRSRY--RSYS 175
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGE 258
P P Q DYS SP RR+ +H SPRGPP ER ++RR YSP Y D N N NG+GE
Sbjct: 176 PAP-QRRDYSPSPERRYADHLRSPRGPPPERDGGHNRRLYSPHY-GHGDDLNKNNNGFGE 233
Query: 259 KSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSPRHTR 299
K Y+ +A R+ P S S S SR+ SADLSPRH R
Sbjct: 234 KLAYDFVEA--RAWRPSPGRPSSSPSGSRTTSADLSPRHAR 272
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 164/257 (63%), Positives = 186/257 (72%), Gaps = 18/257 (7%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRSPPRRGYGG RKEQ GSLLVRNIPL CR E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRSPPRRGYGG-------RKEQGSGSLLVRNIPLSCRAEDL 53
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVYLPKDYYTGEPRGFAFV+FVDPY+A+EAQ+HMN + GREI+VVLA
Sbjct: 54 RVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 113
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AESRKRPEEMR R R RG S + G RSS+YGR RSRS SRS R R RSRSY+
Sbjct: 114 AESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSRSRS------PRYRGRPRSRSYS 167
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGE 258
P PR+ +DYS SP+R+ SPR P+E + RRSYSP D DRR+ + NGY +
Sbjct: 168 PAPRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPANKD-GDRRDAD-NGYEK 225
Query: 259 KSGYEETQA---HWRSP 272
+S ++ H RSP
Sbjct: 226 RSPPADSDGSPPHRRSP 242
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/235 (65%), Positives = 168/235 (71%), Gaps = 15/235 (6%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRSPPRRGYGG R+EQ GSLLVRNIPL CR E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRSPPRRGYGG-------RREQGSGSLLVRNIPLSCRGEDL 53
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVYLPKDYY+GEPRGFAFV+FVDPY+A+EAQ+HMN + F GREI+VVLA
Sbjct: 54 RVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 113
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AESRKRPEEMR R R RG Y G Y RS SRSRSPH+ R R RSRSY+
Sbjct: 114 AESRKRPEEMRSRARVRG---YSG-NEGRRSSYYGRSRSRSRSPHY----RGRPRSRSYS 165
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNG 253
P PR+ +DYS SP R+ SPR P+E E RRSYSP D R NG
Sbjct: 166 PAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRRSYSPASRDGDPRDADNG 220
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/237 (61%), Positives = 161/237 (67%), Gaps = 19/237 (8%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRSPPRRGYGG R+EQ GSLLVRNIPL CR E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRSPPRRGYGG-------RREQGSGSLLVRNIPLSCRGEDL 53
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVYLPKDYY+GEPRGFAFV+FVDPY+A+EAQ+HMN + F GREI+VVLA
Sbjct: 54 RVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLA 113
Query: 139 AESRKRPEEMRQRHRFRG--GSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRS 196
AESRKRPEEMR R R RG G+ R RSRS P RSRS
Sbjct: 114 AESRKRPEEMRSRARVRGYSGNEGRRSSYYGRSRSRSRSPRYRGRP----------RSRS 163
Query: 197 YTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNG 253
Y+P PR+ +DYS SP R+ SPR P+E E RRSYSP D R NG
Sbjct: 164 YSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRRSYSPASRDGDPRDADNG 220
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 165/281 (58%), Positives = 186/281 (66%), Gaps = 31/281 (11%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRS GYG RKE + GSLLVRNIPL R E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRS-----PPPPRRGYGGRKEGS-GSLLVRNIPLSVRAEDL 54
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVY+PKDYY+GEPRGFAFV+FVDPY+A+EAQ+HMN + F GREI+VVLA
Sbjct: 55 RVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLA 114
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AESRKRPEEMR R R RG S + G RSSYYGR RSRS P RSRSY+
Sbjct: 115 AESRKRPEEMRSRTRVRGYSGHEGRRSSYYGRSRSRSPRYRGRP----------RSRSYS 164
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSAD----RRNPNGN 254
P PR+ DYS SPRR+ PR PP+E + RRSYSP D AD +R+P +
Sbjct: 165 PAPRRGNDYSASPRRQEAHRSSPPRRPPKEHDEDKKRRSYSPASRDDADNVYEKRSPPAD 224
Query: 255 GYGEKSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSP 295
G + H RS P+ S SP G SRSRSAD SP
Sbjct: 225 SDG-------SPLHRRS--PKEYSGSPPG--SRSRSADESP 254
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/281 (58%), Positives = 185/281 (65%), Gaps = 31/281 (11%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRS GYG RKE + GSLLVRNIPL R E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRS-----PPPPRRGYGGRKEGS-GSLLVRNIPLSVRAEDL 54
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVY+PKDYY+GEPRGFAFV+FVDPY+A+EAQ+HMN + F GREI+VVLA
Sbjct: 55 RVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLA 114
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AESRKRPEEMR R R RG S + G RSSYYGR RSRS P RSRSY+
Sbjct: 115 AESRKRPEEMRSRTRVRGYSGHEGRRSSYYGRSRSRSPRYRGRP----------RSRSYS 164
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSAD----RRNPNGN 254
P PR+ DYS SPRR+ PR P+E + RRSYSP D AD +R+P +
Sbjct: 165 PAPRRGNDYSASPRRQEAHRSSPPRRLPKEHDEDKKRRSYSPASRDDADNVYEKRSPPAD 224
Query: 255 GYGEKSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSP 295
G + H RS P+ S SP G SRSRSAD SP
Sbjct: 225 SDG-------SPLHRRS--PKEYSGSPPG--SRSRSADDSP 254
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 163/281 (58%), Positives = 184/281 (65%), Gaps = 30/281 (10%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRS GYG RKE + GSLLVRNIPL R E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRS-----PPPPRRGYGGRKEGS-GSLLVRNIPLSVRAEDL 54
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVY+PKDYY+GEPRGFAFV+FVDPY+A+EAQ+HMN + F GREI+VVLA
Sbjct: 55 RVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLA 114
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AESRKRPEEMR R R RG S + G RSSYYGR RSRS P SRSY+
Sbjct: 115 AESRKRPEEMRSRTRVRGYSGHEGRRSSYYGRSRSRSPRYRGRPRS---------SRSYS 165
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSAD----RRNPNGN 254
P PR+ DYS SPRR+ PR P+E + RRSYSP D AD +R+P +
Sbjct: 166 PAPRRGNDYSASPRRQEAHRSSPPRRLPKEHDEDKKRRSYSPASRDDADNVYEKRSPPAD 225
Query: 255 GYGEKSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSP 295
G + H RS P+ S SP G SRSRSAD SP
Sbjct: 226 SDG-------SPLHRRS--PKEYSGSPPG--SRSRSADDSP 255
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/277 (54%), Positives = 170/277 (61%), Gaps = 39/277 (14%)
Query: 19 MRRYSPPYYSPPRRGYGGRG--RSPPRRGYGGGGG-------------------GYGRRK 57
MRRYSPP+ SPPRRGYGG RSPPRRGYGG GYG RK
Sbjct: 1 MRRYSPPHRSPPRRGYGGSPAHRSPPRRGYGGSPPHRSPPRRGYGGRGRSPPRRGYGGRK 60
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
EQ GSLLVRNIPL R E+LR PFERFG VRDVYLPKDYY+GEPRGFAFV+FVDPY+A+
Sbjct: 61 EQGSGSLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDAS 120
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLS 177
EAQ+HMN + F GREI+VVLAAESRKRPE+MR R R RG S GG Y
Sbjct: 121 EAQYHMNRQVFFGREITVVLAAESRKRPEDMRSRTRIRGYS--GGQEGRRSSHYGRSRSR 178
Query: 178 RSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRS 237
P+ R RSRSY+P PR+ +DYS SPR R SP P+E E RRS
Sbjct: 179 SRSL--SPRPRGGRPRSRSYSPAPRRRDDYSASPRGRESHRTKSPIRHPKE-NEEGKRRS 235
Query: 238 YSPGYDDSADRRNPNGNGYGEKSGYEETQAHWRSPPP 274
YSP D D+R+ + + YE+ RSPPP
Sbjct: 236 YSPAGRD-GDQRDADND-------YEK-----RSPPP 259
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 172/224 (76%), Gaps = 14/224 (6%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E N+GSLLVRNIPLDCRPEELRAPFERFG VRDVY+PKDYY+G+PRGFAFVQFVD YEA+
Sbjct: 43 ESNNGSLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEAS 102
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRH-RFRG-GSSYGGPRSSYYGRYRSRS 175
EAQ+HM+ + FAGREISVV+AAE+RKRPEEMR R R RG G SYGG RSSY+GR RSRS
Sbjct: 103 EAQYHMDRQIFAGREISVVVAAETRKRPEEMRHRTSRSRGPGGSYGGQRSSYHGRSRSRS 162
Query: 176 LSRSRSP--HHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQ----ER 229
+SRSRSP H +R R RSRS++P PR+ DYS+SP RRH E P SPR PP+ ER
Sbjct: 163 ISRSRSPPYHSGSRNRYRSRSRSFSPAPRRQGDYSVSP-RRHAERPRSPRSPPRSPPVER 221
Query: 230 GAEYSRRSYSP-GYDDSADRRNPNGNGYGEKSGY--EETQAHWR 270
A++ RRSYSP GY + D+ NGY EKS Y E + W+
Sbjct: 222 DADHKRRSYSPLGYGNDVDQN--QSNGYAEKSVYKSEADRGPWK 263
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 138/197 (70%), Gaps = 8/197 (4%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
+EQ GSLLVRNIPL CR E+LR PFERFG VRDVYLPKDYY+GEPRGFAFV+FVDPY+A
Sbjct: 1 REQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDA 60
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSL 176
+EAQ+HMN + F GREI+VVLAAESRKRPEEMR R R RG Y G Y RS
Sbjct: 61 SEAQYHMNRQVFFGREITVVLAAESRKRPEEMRSRARVRG---YSG-NEGRRSSYYGRSR 116
Query: 177 SRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRR 236
SRSRSPH+ R R RSRSY+P PR+ +DYS SP R+ SPR P+E E RR
Sbjct: 117 SRSRSPHY----RGRPRSRSYSPAPRRRDDYSASPPRKDTHPTKSPRRQPKEHDEEKKRR 172
Query: 237 SYSPGYDDSADRRNPNG 253
SYSP D R NG
Sbjct: 173 SYSPASRDGDPRDADNG 189
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 166/286 (58%), Positives = 186/286 (65%), Gaps = 37/286 (12%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSP Y SPPRRGYGGRGRSPPRRGYGG R+EQ GSLLVRNIPL CRPE+L
Sbjct: 1 MRRYSPQYRSPPRRGYGGRGRSPPRRGYGG-------RREQGSGSLLVRNIPLSCRPEDL 53
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PFERFG VRDVYLPKDYYT EPRGFAFV+FVDPY+A++AQ+H+N F GREI+VV+A
Sbjct: 54 RVPFERFGPVRDVYLPKDYYTREPRGFAFVEFVDPYDASDAQYHLNRSLFFGREITVVVA 113
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
AESRKRP++MR R R RG S G P RSRS SRS SP R R RSRSY+
Sbjct: 114 AESRKRPDDMRNRARVRGYS--GEPERRNSRYGRSRSRSRSYSPR--YRGRPRSRSRSYS 169
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGE 258
P PR+ +DYS SP R H H SPR P+ E RRSYSP G G GE
Sbjct: 170 PAPRRRDDYSASPPRSH--HTQSPRRLPKGH-EEDERRSYSPA-----------GRGGGE 215
Query: 259 KSGYEETQAHWRSPPPRGVSRSPSGSR---------SRSRSADLSP 295
+ +T RSPP + RSP SR SRSRS + SP
Sbjct: 216 RDA--DTNGKRRSPP-SDIDRSPPRSRRHSSGSPVGSRSRSPEASP 258
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 137/244 (56%), Positives = 167/244 (68%), Gaps = 18/244 (7%)
Query: 60 NHGS--LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
+HGS LLVRNIPL CRPEELR PFERFG VRDVYLP+DY+TGEPRGF FV+FVD Y+A+
Sbjct: 34 DHGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDAS 93
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLS 177
EAQ+HMN + FAGREI+VVLAA++RKRPE+MR+R RG S + G R + +G RSRS S
Sbjct: 94 EAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRRPNRHGAGRSRSRS 153
Query: 178 RSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRS 237
SRS R R RS+SY+PVP++ +DYS SP R EHP S + P + RRS
Sbjct: 154 YSRS--RSPRPRGRGRSQSYSPVPKRRDDYSASPPRAKEEHPRSSKQPKE--NNRDRRRS 209
Query: 238 YSPGYDDSADRRNPNGNGYGEK----SGYEETQ---AHWRSPPPRGVSRSPSGSRSRSRS 290
Y+P DD DRR + NG E+ +G E+ + H RS PR S SP GSRSRS S
Sbjct: 210 YTP--DDINDRRGAD-NGRDERKRSPAGEEDEEPRRGHHRS--PRPASMSPPGSRSRSAS 264
Query: 291 ADLS 294
+S
Sbjct: 265 PAIS 268
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 168/242 (69%), Gaps = 15/242 (6%)
Query: 60 NHGS--LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
+HGS LLVRNIPL CRPEELR PFERFG VRDVYLP+DY+TGEPRGF FV+FVD Y+A+
Sbjct: 36 DHGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDAS 95
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLS 177
EAQ+HMN + FAGREI+VVLAA++RKRPE+MR+R RG S + G R +GR RSRS S
Sbjct: 96 EAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRRPYRHGRSRSRSYS 155
Query: 178 RSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRS 237
RSRS R R RS+SY+P P++ +DYS SP R E+P S + P+E + RRS
Sbjct: 156 RSRS----PRPRGRGRSQSYSPAPKRRDDYSASPPRSKEENPRSSKQ-PKENDRDKKRRS 210
Query: 238 YSPGYDDSADRRNPNGNGYGEK----SGYEETQAH-WRSPPPRGVSRSPSGSRSRSRSAD 292
Y+P DD DRR NG+ E+ +G E+ + H R PR S SP GSRSRS S
Sbjct: 211 YTP--DDRNDRRGAE-NGHDERKKSPAGEEDEKPHRGRRRSPRPASMSPPGSRSRSASPA 267
Query: 293 LS 294
+S
Sbjct: 268 IS 269
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 137/242 (56%), Positives = 168/242 (69%), Gaps = 15/242 (6%)
Query: 60 NHGS--LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
+HGS LLVRNIPL CRPEELR PFERFG VRDVYLP+DY+TGEPRGF FV+FVD Y+A+
Sbjct: 36 DHGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDAS 95
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLS 177
EAQ+HMN + FAGREI+VVLAA++RKRPE+MR+R RG S + G R +GR RSRS S
Sbjct: 96 EAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRRPYRHGRSRSRSYS 155
Query: 178 RSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRS 237
RSRS R R RS+SY+P P++ +DYS SP R E+P S + P+E + RRS
Sbjct: 156 RSRS----PRPRGRGRSQSYSPAPKRRDDYSASPPRSKEENPRSSKQ-PKENDRDKKRRS 210
Query: 238 YSPGYDDSADRRNPNGNGYGEK----SGYEETQAH-WRSPPPRGVSRSPSGSRSRSRSAD 292
Y+P DD DRR NG+ E+ +G E+ + H R PR S SP GSRSRS S
Sbjct: 211 YTP--DDRNDRRGAE-NGHDERKKCPAGEEDEKPHRGRRRSPRPASMSPPGSRSRSASPA 267
Query: 293 LS 294
+S
Sbjct: 268 IS 269
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/244 (56%), Positives = 168/244 (68%), Gaps = 20/244 (8%)
Query: 60 NHGS--LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
+HGS LLVRNIPL CRPEELR PFERFG VRDVYLP+DY+TGEPRGF FV+FVD Y+A+
Sbjct: 34 DHGSVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDAS 93
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLS 177
EAQ+HMN + FAGREI+VVLAA++RKRPE+MR+R RG S + G R + +GR RSRS S
Sbjct: 94 EAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRRPNRHGRSRSRSYS 153
Query: 178 RSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRS 237
RSRS R R RS+SY+P P++ +DYS SP R EHP S + P + RRS
Sbjct: 154 RSRS----PRPRGRGRSQSYSPAPKRRDDYSASPPRAKEEHPRSSKQPKE--NNRDRRRS 207
Query: 238 YSPGYDDSADRRNPNGNGYGEK----SGYEETQ---AHWRSPPPRGVSRSPSGSRSRSRS 290
Y+P DD DRR + NG E+ +G E+ + H RS PR S SP GSRSRS S
Sbjct: 208 YTP--DDINDRRGAD-NGRDERKRSPAGEEDEEPRRGHHRS--PRPASMSPPGSRSRSAS 262
Query: 291 ADLS 294
+S
Sbjct: 263 PAIS 266
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 135/244 (55%), Positives = 165/244 (67%), Gaps = 18/244 (7%)
Query: 60 NHGS--LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
+HGS LLVRNIPL CRPEELR PFERFG VRD YLP+DY+TGEPRGF FV+FVD Y+A+
Sbjct: 34 DHGSVSLLVRNIPLRCRPEELRVPFERFGPVRDFYLPRDYHTGEPRGFGFVEFVDAYDAS 93
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLS 177
EAQ+HMN + FAGREI+VVLAA++RKRPE+MR+R RG S + G R + +G RSRS S
Sbjct: 94 EAQYHMNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRRPNRHGAGRSRSRS 153
Query: 178 RSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRS 237
SRS R R RS+SY+P P++ +DYS SP R EHP S + P + RRS
Sbjct: 154 YSRS--RSPRPRGRGRSQSYSPAPKRRDDYSASPPRAKEEHPRSSKQPKE--NNRDRRRS 209
Query: 238 YSPGYDDSADRRNPNGNGYGEK----SGYEETQ---AHWRSPPPRGVSRSPSGSRSRSRS 290
Y+P DD DRR + NG E+ +G E+ + H RS PR S SP GSRSRS S
Sbjct: 210 YTP--DDINDRRGAD-NGRDERKRSPAGEEDEEPRRGHHRS--PRPASMSPPGSRSRSAS 264
Query: 291 ADLS 294
+S
Sbjct: 265 PAIS 268
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 128/193 (66%), Gaps = 7/193 (3%)
Query: 27 YSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
SPPRRGYG R RSPPR YG + + + SLLVRNIP DCR +ELR PFERFG
Sbjct: 6 LSPPRRGYGVRARSPPRGRYG-----GYGGRREPNTSLLVRNIPRDCRSDELRMPFERFG 60
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPE 146
++DVYLPKD+YTGEPRGF FVQF+DP +AAEAQ+HM+G+ GREI+VVLA ++RK+P+
Sbjct: 61 PLKDVYLPKDFYTGEPRGFGFVQFMDPQDAAEAQYHMDGQYIGGREITVVLAEKNRKKPD 120
Query: 147 EMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHED 206
EMR R R YG R S + Y H R +RSRSY+PVPR+ D
Sbjct: 121 EMRVRTSARAPRGYGRRRRSPH--YARSRSRSRSLEHRSTSYRGGHRSRSYSPVPRRGHD 178
Query: 207 YSISPRRRHIEHP 219
YS+SPR RH P
Sbjct: 179 YSVSPRDRHHRSP 191
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 92/110 (83%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVD 112
YG R ++ GSLLVRNIPL R EELR PFERFG VRDVY+PKDYY+GEPRGFAFV+FVD
Sbjct: 82 YGGRNKEGSGSLLVRNIPLSVRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVD 141
Query: 113 PYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGG 162
PY+A+EAQ+HMN + F GREI+VVLAAESRKRPEEMR R R RG S + G
Sbjct: 142 PYDASEAQYHMNRQVFFGREIAVVLAAESRKRPEEMRSRARVRGYSGHEG 191
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 111/139 (79%), Gaps = 2/139 (1%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGS--LLVRNIPLDCRPE 76
MRRYSPPYYSPPRRGYGGRGRSPP G GGG G + LLVRNIPLDCRPE
Sbjct: 1 MRRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 60
Query: 77 ELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVV 136
ELR PFERFG VRDVY+P+DYY+GEPRGFAFV+FVD Y+A EAQ MN + FAGREI+VV
Sbjct: 61 ELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRIFAGREITVV 120
Query: 137 LAAESRKRPEEMRQRHRFR 155
+A+ESRKRPEEMR + R R
Sbjct: 121 VASESRKRPEEMRVKTRTR 139
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGS---LLVRNIPLDCRP 75
MRRYSPPYYSPPRRGYGGRGRSPP G GG G + S LLVRNIPLDCRP
Sbjct: 1 MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
EELR PFERFG VRDVY+P+DYY+G+PRGFAFV+FVD Y+A EAQ MN + FAGREI+V
Sbjct: 61 EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120
Query: 136 VLAAESRKRPEEMRQRHRFR 155
V+A+ESRKRPEEMR + R R
Sbjct: 121 VVASESRKRPEEMRVKTRTR 140
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/140 (70%), Positives = 111/140 (79%), Gaps = 3/140 (2%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGS---LLVRNIPLDCRP 75
MRRYSPPYYSPPRRGYGGRGRSPP G GG G + S LLVRNIPLDCRP
Sbjct: 1 MRRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
EELR PFERFG VRDVY+P+DYY+G+PRGFAFV+FVD Y+A EAQ MN + FAGREI+V
Sbjct: 61 EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITV 120
Query: 136 VLAAESRKRPEEMRQRHRFR 155
V+A+ESRKRPEEMR + R R
Sbjct: 121 VVASESRKRPEEMRVKTRTR 140
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/140 (69%), Positives = 110/140 (78%), Gaps = 3/140 (2%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGS---LLVRNIPLDCRP 75
MRRYSPPYYSP RRGYGGRGRSPP G GG G + S LLVRNIPLDCRP
Sbjct: 1 MRRYSPPYYSPXRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRP 60
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
EELR PFERFG VRDVY+P+DYY+G+PRGFAFV+FVD Y+A EAQ MN + F+GREI+V
Sbjct: 61 EELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFSGREITV 120
Query: 136 VLAAESRKRPEEMRQRHRFR 155
V+A+ESRKRPEEMR + R R
Sbjct: 121 VVASESRKRPEEMRVKTRTR 140
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 123/193 (63%), Gaps = 17/193 (8%)
Query: 27 YSP-PRRGYGGRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFER 84
YSP P RGY R RSP P YGG G SLLVRN+ DCRPE+LR PF +
Sbjct: 7 YSPSPPRGYRRRARSPSPHDHYGGRG-------RDLPTSLLVRNLRRDCRPEDLRRPFGQ 59
Query: 85 FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKR 144
FG V+D+YLP+DYYTG+PRGF FVQ+ DP +AA+A+++M+G+ GR+I+VV A E+RK+
Sbjct: 60 FGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKK 119
Query: 145 PEEMRQRHRFRGGS----SYGGPRSSYY--GRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
P+EMR R R RG S Y RS +Y GR SRS S SRSP PQ R R R RSY+
Sbjct: 120 PQEMRARDRVRGHSYDDRRYSRSRSPHYYRGRSPSRSQSYSRSP--PQNPRHRLRERSYS 177
Query: 199 PVPRQHEDYSISP 211
P S SP
Sbjct: 178 GSPVDSRSRSGSP 190
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 96/134 (71%), Gaps = 9/134 (6%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG GG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGRYGGS-----RDRDLPTSLLVRNLRHDCRQEDLR 54
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
PFE+FG V+D+YLP+DYYTG+PRGF F+Q+VDP +AAEA+HHM+G GRE++VV A
Sbjct: 55 RPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMDGSHLLGRELTVVFAE 114
Query: 140 ESRKRPEEMRQRHR 153
E+RK+P EMR R R
Sbjct: 115 ENRKKPTEMRTRDR 128
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 123/208 (59%), Gaps = 31/208 (14%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG G G SLLVRN+ DCRPE+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGRYVGRG------RDLPTSLLVRNLSHDCRPEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
PF +FG ++D+YLPKDYYTGEPRGF FVQ+VDP +AA+A+HHM+G GRE++VV A
Sbjct: 54 RPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHHMDGCVLLGRELTVVFAE 113
Query: 140 ESRKRPEEMRQRHRFRG-----------GSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGS 188
E+RK+P +MR R R G Y + GRY SRS +P H +
Sbjct: 114 ENRKKPSDMRARERGSGRYHDRRRSPPRSPRYSRSPAQRRGRY-----SRSPAPRH---A 165
Query: 189 RSRYRSRSYTPVPRQHEDY--SISPRRR 214
RSR RS Y P + Y S+SPR R
Sbjct: 166 RSRSRSYDYASQPPKQRAYSRSLSPRDR 193
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (70%), Gaps = 9/134 (6%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG GG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGRFGGS-----RDSDLPTSLLVRNLRHDCRQEDLR 54
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
PFE+FG V+D+YLP+DYYTG+PRGF F+QF+DP +AAEA+H M+G GRE++VV A
Sbjct: 55 RPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAE 114
Query: 140 ESRKRPEEMRQRHR 153
E+RK+P EMR R R
Sbjct: 115 ENRKKPTEMRTRDR 128
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (70%), Gaps = 9/134 (6%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG GG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGRFGGS-----RDSDLPTSLLVRNLRHDCRQEDLR 54
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
PFE+FG V+D+YLP+DYYTG+PRGF F+QF+DP +AAEA+H M+G GRE++VV A
Sbjct: 55 RPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAE 114
Query: 140 ESRKRPEEMRQRHR 153
E+RK+P EMR R R
Sbjct: 115 ENRKKPTEMRTRDR 128
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 154/274 (56%), Gaps = 42/274 (15%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRG-YGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
R YSP SPPR GYG RGRSP RG YGG G SLLVRN+ DCR E+L
Sbjct: 4 RSYSP---SPPR-GYGRRGRSPSPRGRYGGRGSA-----RDLPTSLLVRNLRHDCRGEDL 54
Query: 79 RAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
R PF +FG ++D+YLP+DYYTGEPRGF FVQ+VDP +AAEA++ M+G+ GRE++VV A
Sbjct: 55 RRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFA 114
Query: 139 AESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
E+RK+P +MR R R RG +Y R RS L SRSP P+ +RS R R Y
Sbjct: 115 EENRKKPSDMRARERGRG---------RFYDRRRS-PLRYSRSP-PPRHARSPSRGRDY- 162
Query: 199 PVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSR-RSYSPGYDDSADRRNPNGNGYG 257
YS SP+RR S PQ+R YSR RSY+P + R+P NG
Sbjct: 163 --------YSPSPKRRQYSRSVS----PQDR--RYSRDRSYTPDGRRRSYTRSPPYNGSR 208
Query: 258 EKS-----GYEETQAHWRSPPPRGVSRSPSGSRS 286
+S G ++ RSP P R RS
Sbjct: 209 SRSQSPIRGESPSRLQSRSPDPEDYPREAVRDRS 242
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 116/197 (58%), Gaps = 16/197 (8%)
Query: 32 RGYGGRGRSPPRRGYGGGG----------GGYGRRKEQNHGSLLVRNIPLDCRPEELRAP 81
RG G SPPRR +GGG G R SLLVRNIP DC E+LR P
Sbjct: 2 RGRSPLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLRIP 61
Query: 82 FERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAES 141
FER+GVV+DVYLP+DYYTG+PRGF FVQF++P +AAEAQ+ ++ + GREI+VV A E+
Sbjct: 62 FERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYCLDHQLIQGREITVVFAEEN 121
Query: 142 RKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTP-V 200
RK+P+EMR + R R S P SRS S RS G RS SR +P +
Sbjct: 122 RKKPQEMRTKERIRPARS---PSPGRENNAPSRSPSAVRSHRRRTGERSPMPSRERSPAL 178
Query: 201 PRQHEDYSISPRRRHIE 217
PR+ D PR R +E
Sbjct: 179 PRRSRDG--EPRARELE 193
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 95/134 (70%), Gaps = 10/134 (7%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG YG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRQEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
FE+FG V+D+YLP+DYYTG+PRGF FVQF+DP +AA+A+HHM+G GRE++VV A
Sbjct: 54 KSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAE 113
Query: 140 ESRKRPEEMRQRHR 153
E+RK+P EMR R R
Sbjct: 114 ENRKKPTEMRARER 127
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 117/181 (64%), Gaps = 11/181 (6%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R YSP SPPR GY RGRSP G +G R SLLVRN+ DCRPE+LR
Sbjct: 4 RSYSP---SPPR-GYSRRGRSP------SPRGRHGGRGRDLPTSLLVRNLRHDCRPEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
PF +FG ++D+YLP+DYYTGEPRGF FVQ+VDP +AAEA++ M+G+ GRE++VV A
Sbjct: 54 RPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQMDGQVLLGRELTVVFAE 113
Query: 140 ESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP-HHPQGSRSRYRSRSYT 198
E+RKRP +MR R R RG S Y R + SRSRSP H+P R R+ SRS +
Sbjct: 114 ENRKRPVDMRARERTRGRPSDRRRSPPRYSRSPRYARSRSRSPNHYPPSPRRRHYSRSVS 173
Query: 199 P 199
P
Sbjct: 174 P 174
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 119/193 (61%), Gaps = 17/193 (8%)
Query: 27 YSP-PRRGYGGRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFER 84
YSP P RGY R RSP P YGG G SLLVRN+ DCRPE+LR PF +
Sbjct: 7 YSPSPPRGYRRRARSPSPHDHYGGRG-------RDLPTSLLVRNLRRDCRPEDLRRPFGQ 59
Query: 85 FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKR 144
FG V+D+YLP+DYYTG+PRGF FVQ+ DP +AA+A+++M+G+ GR+I+VV A E+RK+
Sbjct: 60 FGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKK 119
Query: 145 PEEMRQRHRFRG------GSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
P+EMR R R RG S Y GR SRS S SRSP PQ R R R RSY+
Sbjct: 120 PQEMRARDRVRGHSYDDRRYSRSRSPRYYRGRSPSRSQSYSRSP--PQNPRHRLRERSYS 177
Query: 199 PVPRQHEDYSISP 211
P S SP
Sbjct: 178 GSPVDSRSRSGSP 190
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 119/193 (61%), Gaps = 17/193 (8%)
Query: 27 YSP-PRRGYGGRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFER 84
YSP P RGY R RSP P YGG G SLLVRN+ DCRPE+LR PF +
Sbjct: 7 YSPSPPRGYRRRARSPSPHDHYGGRG-------RDLPTSLLVRNLRRDCRPEDLRRPFGQ 59
Query: 85 FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKR 144
FG V+D+YLP+DYYTG+PRGF FVQ+ DP +AA+A+++M+G+ GR+I+VV A E+RK+
Sbjct: 60 FGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKK 119
Query: 145 PEEMRQRHRFRG------GSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYT 198
P+EMR R R RG S Y GR SRS S SRSP PQ R R R RSY+
Sbjct: 120 PQEMRARDRVRGHSYDDRRYSRSRSPRYYRGRSPSRSQSYSRSP--PQNPRHRLRERSYS 177
Query: 199 PVPRQHEDYSISP 211
P S SP
Sbjct: 178 GSPVDSRSRSGSP 190
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 145/296 (48%), Gaps = 62/296 (20%)
Query: 52 GYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
G + KE SL V N+P CRPE+++ PF++FG VRDVYLPKDY TGEPRGFAFV+F
Sbjct: 25 GCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 84
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR----------QRHRFRGGSSYG 161
+A++A++HMN K +GREISV A ++RKRPEEMR QR +S G
Sbjct: 85 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIGARHNSPQRKEECRTNSPG 144
Query: 162 GP--------RSSYYGRYRSR---SLSRSRSPHHPQGSR--------------------- 189
P R SY +Y+ R + R +P P R
Sbjct: 145 QPKGHDEKRKRRSYTPKYKDRQYADIGRDETPPAPDSERPWALCRSPRPSPPGQSHSRSY 204
Query: 190 ---------SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSP 240
R+RS +P P + +D SP+R+ EH G Q +G + RRSY+P
Sbjct: 205 SRSHSLHLHDHARTRSCSPAPGRQDDQYASPQRK--EHQTKSSG--QTKGHDDMRRSYTP 260
Query: 241 GYDDSADRRNPNGNGYGEKSGY---EETQAHWRSPPPRGVSRSPSGSRSRSRSADL 293
Y++ D NG+ E E + RSP P RS S SRSRS +L
Sbjct: 261 EYNECQD----ADNGFDETPPAPDGERSSVLGRSPRPSPPGRSHCHSHSRSRSPEL 312
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 163 PRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSP 222
PR S GR S SRSRSP R RSRS +P + ++ S SP+RR +H
Sbjct: 291 PRPSPPGRSHCHSHSRSRSPE----LRGHARSRSCSPATGRQDNQSTSPQRRE-KHQTKS 345
Query: 223 RGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGEKSGYEETQAHW---RSPPPRGVSR 279
G Q + + RRSY+P Y+D D NGY + + + W RSP P R
Sbjct: 346 SG--QAKEHDEKRRSYTPEYNDRRD----ADNGYDQTPPAPDGERSWALGRSPQPSPPGR 399
Query: 280 SPSGSRSRSRSADL 293
S S SRSRS +L
Sbjct: 400 SHFHSHSRSRSPEL 413
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 145/296 (48%), Gaps = 62/296 (20%)
Query: 52 GYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
G + KE SL V N+P CRPE+++ PF++FG VRDVYLPKDY TGEPRGFAFV+F
Sbjct: 25 GCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 84
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR----------QRHRFRGGSSYG 161
+A++A++HMN K +GREISV A ++RKRPEEMR QR +S G
Sbjct: 85 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIGARHNSPQRKEECRTNSPG 144
Query: 162 GP--------RSSYYGRYRSR---SLSRSRSPHHPQGSR--------------------- 189
P R SY +Y+ R + R +P P R
Sbjct: 145 QPKGHDEKRKRRSYTPKYKDRQYADIGRDETPPAPDSERPWALCRSPRPSPPGQSHSRSY 204
Query: 190 ---------SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSP 240
R+RS +P P + +D SP+R+ EH G Q +G + RRSY+P
Sbjct: 205 SRSHSLHLHDHARTRSCSPAPGRQDDQYASPQRK--EHQTKSSG--QTKGHDDMRRSYTP 260
Query: 241 GYDDSADRRNPNGNGYGEKSGY---EETQAHWRSPPPRGVSRSPSGSRSRSRSADL 293
Y++ D NG+ E E + RSP P RS S SRSRS +L
Sbjct: 261 EYNECQD----ADNGFDETPPAPDGERSSVLGRSPRPSPPGRSHCHSHSRSRSPEL 312
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 163 PRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSP 222
PR S GR S SRSRSP R RSRS +P + ++ S SP+RR +H
Sbjct: 291 PRPSPPGRSHCHSHSRSRSPE----LRGHARSRSCSPATGRQDNQSTSPQRRE-KHQTKS 345
Query: 223 RGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGEKSGYEETQAHW---RSPPPRGVSR 279
G Q + + RRSY+P Y+D D NGY + + + W RSP P R
Sbjct: 346 SG--QAKEHDEKRRSYTPEYNDRRD----ADNGYDQTPPAPDGERSWALGRSPQPSPPGR 399
Query: 280 SPSGSRSRSRSADL 293
S S SRSRS +L
Sbjct: 400 SHFHSHSRSRSPEL 413
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 115/180 (63%), Gaps = 11/180 (6%)
Query: 34 YGGRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVY 92
YG R RSP PR YGG R SLLVRN+ DCR E+LR PF FG ++D+Y
Sbjct: 18 YGRRYRSPSPRNRYGG-------RSRDLPTSLLVRNLRHDCRTEDLRGPFGHFGPLKDIY 70
Query: 93 LPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
LP+DYYTGEPRGF FVQ+VDP +AA+A+HHM+G+ GRE++VV A E+RK+P EMR R
Sbjct: 71 LPRDYYTGEPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARE 130
Query: 153 RFRGGSSYGGPRS-SYYGRYRSRSLSRSRSP-HHPQGSRSRYRSRSYTPVPRQHEDYSIS 210
R R G SY RS Y R S SRSP ++ + R R SRS +P R++ + S S
Sbjct: 131 RVR-GRSYDRKRSPQCYSRSPRYRRSYSRSPLYYSRSPRQRNYSRSISPRDRRYREQSFS 189
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 145/296 (48%), Gaps = 62/296 (20%)
Query: 52 GYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
G + KE SL V N+P CRPE+++ PF++FG VRDVYLPKDY TGEPRGFAFV+F
Sbjct: 387 GCAKDKEGAAVSLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 446
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR----------QRHRFRGGSSYG 161
+A++A++HMN K +GREISV A ++RKRPEEMR QR +S G
Sbjct: 447 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIGARHNSPQRKEECRTNSPG 506
Query: 162 GP--------RSSYYGRYRSR---SLSRSRSPHHPQGSR--------------------- 189
P R SY +Y+ R + R +P P R
Sbjct: 507 QPKGHDEKRKRRSYTPKYKDRQYADIGRDETPPAPDSERPWALCRSPRPSPPGQSHSRSY 566
Query: 190 ---------SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSP 240
R+RS +P P + +D SP+R+ EH G Q +G + RRSY+P
Sbjct: 567 SRSHSLHLHDHARTRSCSPAPGRQDDQYASPQRK--EHQTKSSG--QTKGHDDMRRSYTP 622
Query: 241 GYDDSADRRNPNGNGYGEK---SGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADL 293
Y++ D NG+ E E + RSP P RS S SRSRS +L
Sbjct: 623 EYNECQD----ADNGFDETPPAPDGERSSVLGRSPRPSPPGRSHCHSHSRSRSPEL 674
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 163 PRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSP 222
PR S GR S SRSRSP R RSRS +P + ++ S SP+RR +H
Sbjct: 653 PRPSPPGRSHCHSHSRSRSPE----LRGHARSRSCSPATGRQDNQSTSPQRRE-KHQTKS 707
Query: 223 RGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGEKSGYEETQAHW---RSPPPRGVSR 279
G Q + + RRSY+P Y+ DRR+ + NGY + + + W RSP P R
Sbjct: 708 SG--QAKEHDEKRRSYTPEYN---DRRDAD-NGYDQTPPAPDGERSWALGRSPQPSPPGR 761
Query: 280 SPSGSRSRSRSADL 293
S S SRSRS +L
Sbjct: 762 SHFHSHSRSRSPEL 775
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 90/133 (67%), Gaps = 10/133 (7%)
Query: 32 RGYGGRGRSPPRRGYGGGG----------GGYGRRKEQNHGSLLVRNIPLDCRPEELRAP 81
RG G SPPRR +GGG G R SLLVRNIP DC E+LR P
Sbjct: 2 RGRSPLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLRIP 61
Query: 82 FERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAES 141
FER+GVV+DVYLP+DYYTG+PRGF FVQF++P +AAEAQ+ ++ + GREI+VV A E+
Sbjct: 62 FERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDAAEAQYCLDHQLIQGREITVVFAEEN 121
Query: 142 RKRPEEMRQRHRF 154
RK+P+EMR + R
Sbjct: 122 RKKPQEMRTKERI 134
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 145/296 (48%), Gaps = 62/296 (20%)
Query: 52 GYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
G + KE SL V N+ CRPE+++ PF++FG VRDVYLPKDY TGEPRGFAFV+F
Sbjct: 321 GCAKDKEGAAVSLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFA 380
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR----------QRHRFRGGSSYG 161
+A++A++HMN K +GREISV A ++RKRPEEMR QR +S G
Sbjct: 381 HSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIGARHNSPQRKEECRTNSPG 440
Query: 162 GP--------RSSYYGRYRSR---SLSRSRSPHHPQGSR--------------------- 189
P R SY +Y+ R + R +P P R
Sbjct: 441 QPKGHDEKRKRRSYTPKYKDRQYADIGRDETPPAPDSERPWALCRSPRPSPPGQSHSRSY 500
Query: 190 ---------SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSP 240
R+RS +PVP + +D SP+R+ EH G Q +G + RRSY+P
Sbjct: 501 SRSHSLHLHDHARTRSCSPVPGRQDDQYASPQRK--EHQTKSSG--QTKGHDDMRRSYTP 556
Query: 241 GYDDSADRRNPNGNGYGEK---SGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADL 293
Y++ D NG+ E E + RSP P RS S SRSRS +L
Sbjct: 557 EYNECQD----ADNGFDETPPAPDGERSSVLGRSPRPSPPGRSHCHSHSRSRSPEL 608
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 163 PRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSP 222
PR S GR S SRSRSP R RSRS +P + ++ S SP+RR +H
Sbjct: 587 PRPSPPGRSHCHSHSRSRSPE----LRGHARSRSCSPATGRQDNQSTSPQRRE-KHQTKS 641
Query: 223 RGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGEKSGYEETQAHW---RSPPPRGVSR 279
G Q + + RRSY+P Y+D RR+ + NGY + + + W RSP P R
Sbjct: 642 SG--QAKEHDEKRRSYTPEYND---RRDAD-NGYDQTPPAPDGEQSWALGRSPQPSPPGR 695
Query: 280 SPSGSRSRSRSADL 293
S S SRSRS +L
Sbjct: 696 SHFHSHSRSRSPEL 709
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 10/129 (7%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG YG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRQEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
FE+FG V+D+YLP+DYYTG+PRGF FVQF+DP +AA+A+HHM+G GRE++VV A
Sbjct: 54 KSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAE 113
Query: 140 ESRKRPEEM 148
E+RK+P EM
Sbjct: 114 ENRKKPTEM 122
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 10/129 (7%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG YG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRQEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
FE+FG V+D+YLP+DYYTG+PRGF FVQF+DP +AA+A+HHM+G GRE++VV A
Sbjct: 54 KSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAE 113
Query: 140 ESRKRPEEM 148
E+RK+P EM
Sbjct: 114 ENRKKPTEM 122
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 10/129 (7%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG YG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRQEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
FE+FG V+D+YLP+DYYTG+PRGF FVQF+DP +AA+A+HHM+G GRE++VV A
Sbjct: 54 KSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAE 113
Query: 140 ESRKRPEEM 148
E+RK+P EM
Sbjct: 114 ENRKKPTEM 122
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 10/129 (7%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG YG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRQEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
FE+FG V+D+YLP+DYYTG+PRGF FVQF+DP +AA+A+HHM+G GRE++VV A
Sbjct: 54 KSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAE 113
Query: 140 ESRKRPEEM 148
E+RK+P EM
Sbjct: 114 ENRKKPTEM 122
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 110/170 (64%), Gaps = 16/170 (9%)
Query: 19 MRR---YSPPYYSPPRRGYGGRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCR 74
MRR YSP SPP RGY GR RSP PR Y G G SLLVRN+ DCR
Sbjct: 1 MRRGYSYSP---SPPPRGYRGRARSPSPRDRYDGRG-------RDLPTSLLVRNLRRDCR 50
Query: 75 PEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREIS 134
P++LR PF +FG ++DVY+P+DYYT EPRGF FVQ+ DP +AA+A+++M+G+ GRE++
Sbjct: 51 PDDLRRPFAQFGRLKDVYIPRDYYTQEPRGFGFVQYFDPDDAADAKYYMDGQVILGREVA 110
Query: 135 VVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGR--YRSRSLSRSRSP 182
VV A E+RK+P EMR R RG S S GR YR RS SRS SP
Sbjct: 111 VVFAQENRKKPAEMRTRESSRGRSYDQRHSPSPRGRPSYRGRSYSRSPSP 160
>gi|224052944|ref|XP_002297637.1| predicted protein [Populus trichocarpa]
gi|222844895|gb|EEE82442.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 100/172 (58%), Gaps = 41/172 (23%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R YSP SPPR GYG RGRSP RG YG R SLLVRN+ DCRPE+LR
Sbjct: 4 RSYSP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRPEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTG-------------------------------EPRGFAFV 108
PFE+FG ++D+YLP+DYYTG EPRGF FV
Sbjct: 54 RPFEQFGALKDIYLPRDYYTGSFEDDVNDSEDLKEVGFEYIVKRFQVLKSFKEPRGFGFV 113
Query: 109 QFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
QF DP++AAEA+HHM+G+ GRE++VV A E+RK+P +MR R R G +
Sbjct: 114 QFADPHDAAEAKHHMDGRVLLGRELTVVFAEENRKKPMDMRTRERTSCGVDF 165
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 79/104 (75%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVD 112
Y R+ SLLVRN+ DCRPE+LR PF FG ++D+YLPKDYYTG+PRGF F+QFVD
Sbjct: 32 YAPRQSDLPTSLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVD 91
Query: 113 PYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
P +AA+A++HM+G+ GREI+VV A E+RK+P EMR R R G
Sbjct: 92 PADAADAKYHMDGQVLLGREITVVFAEENRKKPTEMRVRERSSG 135
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 98/148 (66%), Gaps = 23/148 (15%)
Query: 25 PYYSPPRRGYGGRGRSPPRRGYGG------------------GGGGYGRRKEQNHGSLLV 66
PYYSP RRGY SPPRRGY GG G R+ + SLLV
Sbjct: 6 PYYSP-RRGYD----SPPRRGYDSPPRRSYGGRRRSPSPPPRGGRGGYGREPEPPTSLLV 60
Query: 67 RNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGK 126
RNIP DC ++LR PFER+GVV+DVYLP+DYYTG PRGF FVQF++P +AAEAQ+ ++ +
Sbjct: 61 RNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYCLDHQ 120
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHRF 154
AGREI+VV A E+RK+P+EMR + R
Sbjct: 121 LIAGREITVVFAEENRKKPQEMRIKERI 148
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 98/148 (66%), Gaps = 23/148 (15%)
Query: 25 PYYSPPRRGYGGRGRSPPRRGYGG------------------GGGGYGRRKEQNHGSLLV 66
PYYSP RRGY SPPRRGY GG G R+ + SLLV
Sbjct: 6 PYYSP-RRGYD----SPPRRGYDSPPRRSYGGRRRSPSPPPRGGRGGYGREPEPPTSLLV 60
Query: 67 RNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGK 126
RNIP DC ++LR PFER+GVV+DVYLP+DYYTG PRGF FVQF++P +AAEAQ+ ++ +
Sbjct: 61 RNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYCLDHQ 120
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHRF 154
AGREI+VV A E+RK+P+EMR + R
Sbjct: 121 LIAGREITVVFAEENRKKPQEMRIKERI 148
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 94/130 (72%), Gaps = 7/130 (5%)
Query: 27 YSP-PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERF 85
YSP P RGYG + RSP G +G R SLLVRN+ LDCRPE+LR PF RF
Sbjct: 8 YSPSPPRGYGRKHRSP------SPRGRHGGRGRDLPTSLLVRNLRLDCRPEDLRGPFGRF 61
Query: 86 GVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRP 145
G ++DVYLP+DYYTGEPRGF FVQ+++P +AA+A+HHM+G+ GRE++VV A E+RK+P
Sbjct: 62 GPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHHMDGEILFGRELTVVFAEENRKKP 121
Query: 146 EEMRQRHRFR 155
EMR R R R
Sbjct: 122 AEMRARDRVR 131
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 99/153 (64%), Gaps = 23/153 (15%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 79
R Y+P SPPR GYG RGRSP RG YG R SLLVRN+ DCR E+LR
Sbjct: 4 RSYTP---SPPR-GYGRRGRSPSPRGR------YGGRSRDLPTSLLVRNLRHDCRQEDLR 53
Query: 80 APFERFGVVRDVYLPKDYYTG------------EPRGFAFVQFVDPYEAAEAQHHMNGKR 127
FE+FG V+D+YLP+DYYTG +PRGF FVQF+DP +AA+A+HHM+G
Sbjct: 54 KSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYL 113
Query: 128 FAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
GRE++VV A E+RK+P EMR R R GGS +
Sbjct: 114 LLGRELTVVFAEENRKKPTEMRARERG-GGSRF 145
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 75/89 (84%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRPE+LR PF +FG ++D+YLPKDYYTGEPRGF FVQFVDP +AA+A++H
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYH 101
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G+ GRE++VV A E+RK+P EMR R
Sbjct: 102 MDGQVLLGRELTVVFAEENRKKPTEMRTR 130
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 98/148 (66%), Gaps = 23/148 (15%)
Query: 25 PYYSPPRRGYGGRGRSPPRRGYGG------------------GGGGYGRRKEQNHGSLLV 66
PYYSP RRGY SPPRRGY GG G R+ + SLLV
Sbjct: 6 PYYSP-RRGYD----SPPRRGYDSPPRRSYGGRRRSPSPPPRGGRGGYGREPEPPTSLLV 60
Query: 67 RNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGK 126
RNIP DC ++LR PFER+GVV+DVYLP+DYYTG PRGF FVQF++P +AAEAQ+ ++ +
Sbjct: 61 RNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYCLDHQ 120
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHRF 154
AGREI+VV A E+RK+P+EMR + R
Sbjct: 121 LIAGREITVVFAEENRKKPQEMRIKERI 148
>gi|297746454|emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 125/298 (41%), Positives = 154/298 (51%), Gaps = 66/298 (22%)
Query: 20 RRYSPPYYSPPRRGYGGRGRSPPRRG-YGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
R YSP SPPR GYG RGRSP RG YGG G SLLVRN+ DCR E+L
Sbjct: 4 RSYSP---SPPR-GYGRRGRSPSPRGRYGGRGSA-----RDLPTSLLVRNLRHDCRGEDL 54
Query: 79 RAPFERFGVVRDVYLPKDYYTGE------------------------PRGFAFVQFVDPY 114
R PF +FG ++D+YLP+DYYTGE PRGF FVQ+VDP
Sbjct: 55 RRPFGQFGPLKDIYLPRDYYTGEIKVLKTSINLEEFQVILKLTLAREPRGFGFVQYVDPA 114
Query: 115 EAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSR 174
+AAEA++ M+G+ GRE++VV A E+RK+P +MR R R RG +Y R RS
Sbjct: 115 DAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARERGRG---------RFYDRRRS- 164
Query: 175 SLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYS 234
L SRSP P+ +RS R R Y YS SP+RR S PQ+R YS
Sbjct: 165 PLRYSRSP-PPRHARSPSRGRDY---------YSPSPKRRQYSRSVS----PQDR--RYS 208
Query: 235 R-RSYSPGYDDSADRRNPNGNGYGEKS-----GYEETQAHWRSPPPRGVSRSPSGSRS 286
R RSY+P + R+P NG +S G ++ RSP P R RS
Sbjct: 209 RDRSYTPDGRRRSYTRSPPYNGSRSRSQSPIRGESPSRLQSRSPDPEDYPREAVRDRS 266
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 75/90 (83%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRPE+LR PF +FG ++D+YLPKDYYTGEPRGF FVQ+VDP +AA+A++H
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
M+G+ GRE++VV A E+RK+P EMR R
Sbjct: 102 MDGQVLLGRELTVVFAEENRKKPTEMRTRE 131
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 93/131 (70%), Gaps = 7/131 (5%)
Query: 27 YSP-PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERF 85
YSP P RGY RSP R Y GG G SLLVRN+ DCRPE+LR PF +F
Sbjct: 7 YSPSPPRGYRRSERSPSPRDYYGGRG------RDLPTSLLVRNLRRDCRPEDLRRPFGQF 60
Query: 86 GVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRP 145
G ++D+YLP+DYYTGEPRGF FVQ+ +P +AA+A+++M+G+ GR+I+VV A E+RK+P
Sbjct: 61 GRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKYYMDGQVVLGRQITVVFAEENRKKP 120
Query: 146 EEMRQRHRFRG 156
+EMR R R RG
Sbjct: 121 QEMRARDRVRG 131
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 73/86 (84%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRPE+LR PFE+FG ++D+YLP+DYYTGEPRGF FVQ+ DP +AAEA+HH
Sbjct: 43 SLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHH 102
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
M+G+ GRE++VV A E+RK+P +M
Sbjct: 103 MDGRVLLGRELTVVFAEENRKKPVDM 128
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 72/93 (77%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI LD RPE+LR PFERFG V+DVYLPK+YYTGEPRGF FV+F + +AAEA+HH+
Sbjct: 46 LLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHL 105
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N GREI++V A E+RK P+EMR R G
Sbjct: 106 NHSVIGGREIAIVFAEENRKTPQEMRTNSRVSG 138
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
G YG R SLLVRN+ DCRP++LR PF +FG V+D+YLP+DYYTGEPRGF F+Q+
Sbjct: 26 GRYGGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQY 85
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
DP +AA+A++HM+G+ GRE++VV A E+RK+P EMR R R
Sbjct: 86 YDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARERV 129
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 75/90 (83%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRPE+LR PF +FG ++D+YLPKDYYTGEPRGF FVQ+VDP +AA+A++H
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
M+G+ GRE++VV A E+RK+P EMR R
Sbjct: 102 MDGQVLLGRELTVVFAEENRKKPTEMRTRE 131
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 86/120 (71%), Gaps = 6/120 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRP++LR PF +FG V+D+YLPKDYYT EP+GF F+Q+ DP +A++A++H
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYH 97
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
M+G+ GREI+VV A E+RK+P +MR R R G S SY R RSRS S SP
Sbjct: 98 MDGQMLLGREITVVFAEENRKKPSDMRARERMSGRS------RSYDRRLRSRSPGYSDSP 151
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
G YG R SLLVRN+ DCRP++LR PF +FG V+D+YLP+DYYTGEPRGF F+Q+
Sbjct: 26 GRYGGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQY 85
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
DP +AA+A++HM+G+ GRE++VV A E+RK+P EMR R R
Sbjct: 86 YDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARERV 129
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
G YG R SLLVRN+ DCRP++LR PF +FG V+D+YLP+DYYTGEPRGF F+Q+
Sbjct: 33 GRYGGRDRDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQY 92
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
DP +AA+A++HM+G+ GRE++VV A E+RK+P EMR R R
Sbjct: 93 YDPEDAADAKYHMDGQILLGREVTVVFAEENRKKPSEMRARERV 136
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 83/113 (73%), Gaps = 6/113 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRP++LR PF +FG V+D+YLPKDYYT EPRGF F+Q+ DP +A++A+++
Sbjct: 40 SLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYY 99
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRS 175
M+GK GREI+VV A E+RK+P +MR R + G SY GR RSRS
Sbjct: 100 MDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRG------RSYDGRLRSRS 146
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 113/184 (61%), Gaps = 15/184 (8%)
Query: 36 GRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLP 94
GR RSP PR Y G G SLLVRN+ DCRPE+LR PF +FG ++DVY+P
Sbjct: 18 GRARSPSPRVRYVGRG-------RDLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDVYIP 70
Query: 95 KDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
+DYYT EPRGF FVQ+ DP +AA+A+++M+G+ GREI+VV A E+RK P EMR R
Sbjct: 71 RDYYTREPRGFGFVQYFDPEDAADAKYYMDGQVVLGREIAVVFAQENRKHPSEMRTRESS 130
Query: 155 RGGSSYGGPRS-SYYGR--YRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISP 211
R G SY RS S GR +R RS SRS SP + R R+R SY+ P S SP
Sbjct: 131 R-GRSYDRRRSLSPRGRSPFRGRSYSRSPSPRY---ERRRFREDSYSRSPVDGRSRSGSP 186
Query: 212 RRRH 215
H
Sbjct: 187 LHEH 190
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 74/89 (83%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRPE+L PF +FG ++DVYLP+DYYTGEPRGF FVQ+VDP +AA+A++H
Sbjct: 41 SLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYH 100
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G+ GREI+VV A E+RK+P EMR R
Sbjct: 101 MDGRILLGREITVVFAEENRKKPAEMRAR 129
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 94/131 (71%), Gaps = 7/131 (5%)
Query: 27 YSP-PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERF 85
YSP P RGY R RSP R Y YG R SLLVRN+ DCRPE+LR PF +F
Sbjct: 7 YSPSPPRGYRRRERSPSPRDY------YGGRGRDLPTSLLVRNLRRDCRPEDLRRPFGQF 60
Query: 86 GVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRP 145
G ++D+YLP+DYYTGEPRGF FVQ+ DP +AA+A+++M+G+ GR+I+VV A E+RK+P
Sbjct: 61 GRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITVVFAEENRKKP 120
Query: 146 EEMRQRHRFRG 156
+EMR R R RG
Sbjct: 121 QEMRARDRVRG 131
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 19/127 (14%)
Query: 30 PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
PR YGGRGR P SLLVRN+ DCRPE+LR PF +FG ++
Sbjct: 25 PRDRYGGRGRDLP-------------------TSLLVRNLRRDCRPEDLRRPFGQFGRLK 65
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
D+Y+P+DYY+GEPRGF FVQ+ DP +AA+A+++M+G+ GRE++VV A E+RK+P EMR
Sbjct: 66 DIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMR 125
Query: 150 QRHRFRG 156
R R G
Sbjct: 126 SRDRISG 132
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 19/127 (14%)
Query: 30 PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
PR YGGRGR P SLLVRN+ DCRPE+LR PF +FG ++
Sbjct: 28 PRDRYGGRGRDLP-------------------TSLLVRNLRRDCRPEDLRRPFGQFGRLK 68
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
D+Y+P+DYY+GEPRGF FVQ+ DP +AA+A+++M+G+ GRE++VV A E+RK+P EMR
Sbjct: 69 DIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMR 128
Query: 150 QRHRFRG 156
R R G
Sbjct: 129 SRDRISG 135
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 99/141 (70%), Gaps = 13/141 (9%)
Query: 19 MRR---YSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRP 75
MRR YSP SPPR GY R RSP R Y YG R SLLVRN+ DCRP
Sbjct: 1 MRRGYSYSP---SPPR-GYRRRERSPSPRDY------YGGRGRDLPTSLLVRNLRRDCRP 50
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
E+LR PF +FG ++D+YLP+DYYTGEPRGF FVQ+ DP +AA+A+++M+G+ GR+I+V
Sbjct: 51 EDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYYMDGQVVLGRQITV 110
Query: 136 VLAAESRKRPEEMRQRHRFRG 156
V A E+RK+P+EMR R R RG
Sbjct: 111 VFAEENRKKPQEMRARDRVRG 131
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/127 (50%), Positives = 85/127 (66%), Gaps = 19/127 (14%)
Query: 30 PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
PR YGGRGR P SLLVRN+ DCRPE+LR PF +FG ++
Sbjct: 200 PRDRYGGRGRDLP-------------------TSLLVRNLRRDCRPEDLRRPFGQFGRLK 240
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
D+Y+P+DYY+GEPRGF FVQ+ DP +AA+A+++M+G+ GRE++VV A E+RK+P EMR
Sbjct: 241 DIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYYMDGQVILGREVAVVFAEENRKKPSEMR 300
Query: 150 QRHRFRG 156
R R G
Sbjct: 301 SRDRISG 307
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 103/166 (62%), Gaps = 15/166 (9%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ D R E+L PF FG ++DVYLP+DYYTG PRGF FVQ+VDP +AA+A++H
Sbjct: 40 SLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYH 99
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
++G+ GRE++VV A E+RK+P EMR R R + SY R R SRS
Sbjct: 100 LDGQILLGRELTVVFAEENRKKPAEMRARER------HSTRERSYDYRRSPRGYSRS--- 150
Query: 183 HHPQGSRSRYRSRSYTPVPRQHE-DYSISPRRRHI---EHPGSPRG 224
P+ +R+ RS YTP PR+ SISPR R + GSP G
Sbjct: 151 --PRYARTYSRSPDYTPSPRRWRYSKSISPRDRRYGRRSYSGSPYG 194
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 92/142 (64%), Gaps = 17/142 (11%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRN+PLD RPE+LR PFE++G V+DVYLPK+YYTGEPRGF FV++ +AAEA+ M
Sbjct: 54 LLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRM 113
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPH 183
N K GREI +V A E+RK P+EMR R G +GG +R R+P
Sbjct: 114 NHKIIGGREIRIVYAEENRKTPQEMRTTARVSG--RHGGS-------------TRGRTP- 157
Query: 184 HPQGSRSRYRSRSYTPVPRQHE 205
P+ R R+RS S++P +H+
Sbjct: 158 -PKSPRRRHRSYSHSPSSARHD 178
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 71/90 (78%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRNI D R ++LR PFER+G V+DVYLPKD+Y+GEPRGF FVQF+DP +A EAQ+
Sbjct: 4 SLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQFIDPRDAIEAQYK 63
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
MN + GRE+SVV A E+RK+P EMR +
Sbjct: 64 MNHQLIRGREVSVVFAEETRKKPAEMRMKE 93
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RPE+LR PFE+FG ++D+YLPK+Y+TGEPRGF FV++ +AAEA+ M
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQ--RHRFRGGSSYGGPRSSYYGRYRSRSLSRSRS 181
+ K GREI +V A E+RK P+EMR+ R R G S+GG R+R RS SRS S
Sbjct: 110 DHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYRSYSRSPS 169
Query: 182 P 182
P
Sbjct: 170 P 170
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RPE+LR PFE+FG ++D+YLPK+Y+TGEPRGF FV++ +AAEA+ M
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQ--RHRFRGGSSYGGPRSSYYGRYRSRSLSRSRS 181
+ K GREI +V A E+RK P+EMR+ R R G S+GG R+R RS SRS S
Sbjct: 110 DHKIIGGREIRIVFAEENRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYRSYSRSPS 169
Query: 182 P 182
P
Sbjct: 170 P 170
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 42 PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGE 101
PR Y RR G LLVRN+PLD RPE+LR PFERFG V+DVYLPK+YYTGE
Sbjct: 31 PRDRYRESRSHRDRRSPAPSG-LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGE 89
Query: 102 PRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
PRGF FV+F +AAEA+ +N GREI +V A E+RK P+EMR
Sbjct: 90 PRGFGFVKFRFAEDAAEAKQQLNHTVIGGREIRIVFAEENRKTPQEMR 137
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 67/86 (77%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRN+PLD RPE+LR PFER+G V+DVYLPK+YYTGEPRGF FV++ +AAEA+ H+
Sbjct: 51 LLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQHL 110
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N GREI +V A E+RK +EMR
Sbjct: 111 NHTIIGGREIRIVFAEENRKTSQEMR 136
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 102/190 (53%), Gaps = 16/190 (8%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI LD RPE+LR PFERFG V+DVYLPK++YT EPRGF FV++ + +AAEA+ HM
Sbjct: 57 LLVRNISLDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRHM 116
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP- 182
N + GREIS+V A E+RK P+EMR R R GG R RS S
Sbjct: 117 NHQVIGGREISIVFAEENRKNPQEMRATARVRTSRHPGGGFRRRTPPRSPRRRYRSYSRS 176
Query: 183 ----------HHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRG-PPQERGA 231
H PQ RS +P+PR R R + P PR P+E G
Sbjct: 177 PSPSRHGLRGHTPQED-DYSEGRSISPIPRSESRSPQGFRSRAVASP--PRASSPRENGR 233
Query: 232 EYSRRSYSPG 241
RR SPG
Sbjct: 234 SVLRRQ-SPG 242
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 115/223 (51%), Gaps = 43/223 (19%)
Query: 41 PPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG 100
PPRRGY G LLVRNI L R E++R PFE+FG ++DVYLP++++T
Sbjct: 44 PPRRGYDRPSAPTG---------LLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTK 94
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
E RGF FV+F P +AA A+ MN + GREI++V A E+RK P+EMR R R R
Sbjct: 95 ELRGFGFVKFRHPEDAAYAKQEMNHQVICGREITIVFAEENRKTPQEMRFRTRSRHMD-- 152
Query: 161 GGPRSSYYGRYRSR-SLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHP 219
G YR R S+SRS P +P SY+P P SP R++
Sbjct: 153 --------GNYRRRQSMSRSPRPRYP----------SYSPEP--------SPVRQNSRDR 186
Query: 220 G--SPRG---PPQERGAEYSRRSYSPGYDDSADRRNPNGNGYG 257
SPRG PP ++ SP D R +P+ NG+G
Sbjct: 187 DNYSPRGSYSPPTRDKRQHISDCRSPSLDGHERRISPSNNGHG 229
>gi|302760651|ref|XP_002963748.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
gi|300169016|gb|EFJ35619.1| hypothetical protein SELMODRAFT_79810 [Selaginella moellendorffii]
Length = 100
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 71 LDC-RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFA 129
DC RPE++R PFE+FG ++DVYLPKD+YTGEPRGF FVQ+++P +AA A+HHM+ +
Sbjct: 2 CDCHRPEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLG 61
Query: 130 GREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSS 166
GREI+VV A E+RK+P EMR + R R + P S
Sbjct: 62 GREITVVFAEENRKKPSEMRMKSRVRSVFDHVFPCLS 98
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 68/87 (78%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RPE+LR FE+FG ++D+YLPK+YYTGEPRGF FV++ +AAEA+ M
Sbjct: 42 LLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAKQRM 101
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQ 150
+ K GREI +V A E+RK P+EMR+
Sbjct: 102 DHKTIGGREIRIVFAEENRKTPQEMRR 128
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RP +LR FERFG ++D+YLP++YYTGEPRGF FV++ +AAEA M
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N K GREI++V A E+RK P+EMR
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMR 134
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RP +LR FERFG ++D+YLP++YYTGEPRGF FV++ +AAEA M
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N K GREI++V A E+RK P+EMR
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMR 134
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 67/86 (77%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRN+PLD RPE+LR PFER+G V+DVYLP++YYTGEPRGF FV++ +AAEA+ +
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQL 109
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N GREI +V A E+RK P+EMR
Sbjct: 110 NHTIIGGREIRIVFAEENRKTPQEMR 135
>gi|302786120|ref|XP_002974831.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
gi|300157726|gb|EFJ24351.1| hypothetical protein SELMODRAFT_102070 [Selaginella moellendorffii]
Length = 95
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 70/93 (75%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREI 133
RPE++R PFE+FG ++DVYLPKD+YTGEPRGF FVQ+++P +AA A+HHM+ + GREI
Sbjct: 1 RPEDVRGPFEQFGHIKDVYLPKDFYTGEPRGFGFVQYMNPEDAARAKHHMDRQVLGGREI 60
Query: 134 SVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSS 166
+VV A E+RK+P EMR + R R + P S
Sbjct: 61 TVVFAEENRKKPSEMRMKSRVRSVFDHVFPCLS 93
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 72/89 (80%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRPE+LR F RFG ++D+YLP+DYY+GEPRGF FVQFVD +AA+A++
Sbjct: 38 SLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYE 97
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
++G+ G E++VV A E+RKRPEEMR R
Sbjct: 98 LDGQVLLGHELTVVFAEENRKRPEEMRAR 126
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 65/86 (75%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RP +LR FERFG ++D+YLP++YYTGEPRGF FV++ +AAEA M
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N K GREI++V A E+RK +EMR
Sbjct: 109 NHKVIGGREIAIVFAEENRKTTQEMR 134
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ DCRP++LR PF +FG ++D+YLP+DYYT EPRGF F+Q+ DP +AA+AQ+H
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAADAQYH 97
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRS-----LS 177
M+G+ GRE++VV A E+RK+P EMR R R RS R RS S S
Sbjct: 98 MDGQILLGREVAVVFAEENRKKPFEMRTRERTSSRGRSYDRRSRSPRRGRSVSPGYSDRS 157
Query: 178 RSRSPHHPQGSRSRYRSRS 196
RSRS + ++ SRS
Sbjct: 158 RSRSQSKSPAPKRKHHSRS 176
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI L RPE++R PFE+FG V+DVYLP++++T E RGF FV+F P +AA A+ +
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR R R G
Sbjct: 123 NHQVIGGREISIVFAEENRKTPQEMRMRTRTSG 155
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 69/93 (74%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RNI L RPE++R PFE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR+R R G
Sbjct: 119 NHQVIGGREISIVYAEENRKTPQEMRRRTRTSG 151
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI L RPE++R PFE+FG V+DVYLP++++T E RGF FV+F P +AA A+ +
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR R R G
Sbjct: 123 NHQVIGGREISIVFAEENRKTPQEMRMRTRTSG 155
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI L RPE++R PFE+FG V+DVYLP++++T E RGF FV+F P +AA A+ +
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR R R G
Sbjct: 123 NHQVIGGREISIVFAEENRKTPQEMRMRTRTSG 155
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRNI RPE++R FER+G VRDVY+PKD+YT EP+GFAFV+F EA +A+ +
Sbjct: 8 SLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRN 67
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
++G R GR+I VV A E RK ++MR+R R
Sbjct: 68 LDGVRIDGRDIRVVFAQERRKSTDQMRERER 98
>gi|302760313|ref|XP_002963579.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
gi|302799491|ref|XP_002981504.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300150670|gb|EFJ17319.1| hypothetical protein SELMODRAFT_8339 [Selaginella moellendorffii]
gi|300168847|gb|EFJ35450.1| hypothetical protein SELMODRAFT_8343 [Selaginella moellendorffii]
Length = 79
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 65/78 (83%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREI 133
RPEE+R PFE+FG V+DVYLPKDYY+GEPRGF FVQF++P +AA+A+ +M+ + GREI
Sbjct: 2 RPEEVRVPFEKFGPVKDVYLPKDYYSGEPRGFGFVQFIEPGDAADAKFNMDHQLLGGREI 61
Query: 134 SVVLAAESRKRPEEMRQR 151
+VV A E+RK+P EMR +
Sbjct: 62 TVVFAEENRKKPSEMRIK 79
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 66/86 (76%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRN+PLD RPE+LR PFER+G V+DVYLP++YYTGEPRGF FV++ +AA A+ +
Sbjct: 50 LLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAGAKQQL 109
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N GREI +V A E+RK P+EMR
Sbjct: 110 NHTIIGGREIRIVFAEENRKTPQEMR 135
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 69/93 (74%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RNI L RPE++R PFE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR+R R G
Sbjct: 119 NHQVIGGREISIVYAEENRKTPQEMRRRTRTSG 151
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 65/86 (75%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RN+PLD RP +LR FERFG ++D+YLP+++ +GEPRGF FV++ +AAEA M
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR 149
N K GREI++V A E+RK P+EMR
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMR 134
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI L RPE++R PFE+FG V+DVYLP++++T E RGF FV+F P +AA A+ +
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR R R G
Sbjct: 123 NHQVIGGREISIVFAEENRKTPQEMRMRTRTSG 155
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 69/93 (74%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+R+I L RPE++R PFE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRDISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR+R R G
Sbjct: 119 NHQVIGGREISIVYAEENRKTPQEMRRRTRTSG 151
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RNI L RPE++RA FE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
+ + GREIS+V A E+RK P+EMR R R G
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQEMRMRTRTSG 151
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RNI L RPE++RA FE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
+ + GREIS+V A E+RK P+EMR R R G
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQEMRMRTRTSG 151
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRNI RPE++R FER+G VRDVY+PKDYYT EP+GFAFV+F EA +A+ +
Sbjct: 233 SLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARRN 292
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
++G R GR+I VV A E RK ++M
Sbjct: 293 LDGVRIDGRDIRVVFAQERRKSTDQM 318
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N SLL+RN+ + P+++R FE FG +RDVYLP D+YT PRGF FV++ DP A E
Sbjct: 3 ENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKE 62
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
A + +N + G+EI +++A RK P+ M++ H S Y
Sbjct: 63 ALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNDSKY 104
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 68/93 (73%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RNI L RPE++RA FE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
+ + GREIS+V A E+RK P+EMR R R G
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQEMRMRTRTSG 151
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 64/99 (64%)
Query: 52 GYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
G RR+ SLL RN+ ++LR ERFG +RD+YLPKD+YTG+PRG FV+F
Sbjct: 19 GGMRRERDLRTSLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFS 78
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQ 150
DP +A EA+H ++G AGR ISV A RKRPE+ R
Sbjct: 79 DPKDAEEARHSLDGSTLAGRVISVQFAQHGRKRPEDYRN 117
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N SLL+RN+ + P+++R FE FG +RDVYLP D+YT PRGF FV++ DP A E
Sbjct: 3 ENGCSLLIRNLSFET-PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKE 61
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSR 178
A + +N + G+EI +++A RK P+ M++ H S Y + R + R +SR
Sbjct: 62 ALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNDSKYRSYKYENNNREKRRRISR 121
Query: 179 SRSPHHPQGSRSRYRSRSYT 198
+P RSR RSR +
Sbjct: 122 -----YPSIDRSRDRSRDIS 136
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N SLL+RN+ + P+++R FE FG +RDVYLP D+YT PRGF FV++ DP A E
Sbjct: 3 ENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAKE 62
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
A + +N + G+EI +++A RK P+ M++ H S Y
Sbjct: 63 ALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNESKY 104
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 66/93 (70%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLVRNI L R E++R PFE+FG ++DVYLP++++T E RGF FV+F +AA A+ +
Sbjct: 60 LLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAKQEL 119
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + GREIS+V A E+RK P+EMR R R G
Sbjct: 120 NHQVICGREISIVFAEENRKTPQEMRFRTRTGG 152
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 62/86 (72%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL+VRN+PLD R E+LR+ FE++G ++DVY+P+DYYT PRGF FV+F D +A +A +
Sbjct: 18 SLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMYS 77
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
++ GREISV + E RK P +M
Sbjct: 78 LDRSTINGREISVTFSREGRKTPRDM 103
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 62/90 (68%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N S+LVRNIPL+ E+LRA FE+FG +RDVY+P+DYYT RGF F++F D +A E
Sbjct: 18 RNKVSVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADE 77
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEM 148
A + + GREI+V L+ E RK P EM
Sbjct: 78 AIYQTDRTMLDGREINVCLSKEGRKTPREM 107
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + + P +R F++FG ++DVYLP DYYT EPRGF FV+F DP +A +A
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYG 161
MNG G I V +A + R P MR + R GGS YG
Sbjct: 73 MNGSELDGNRIEVFVAQKGRSDPRIMRYKERG-GGSGYG 110
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+RNI R +ELR FE FG VRDVY+P+D++T E +GFAFV+F + +A EA +
Sbjct: 8 SLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEEALRN 67
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
++G R GREI+VV A E RK +EM
Sbjct: 68 LDGSRLDGREITVVFAQEKRKSTDEM 93
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 47 GGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
GG GG + SLLVRN+P + P LR FERFG VRDVY+P DYY+ PRGF
Sbjct: 135 GGRGGAR-----EGSCSLLVRNLPDEVNPMRLRDAFERFGYVRDVYIPLDYYSKRPRGFG 189
Query: 107 FVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQ 150
FV+F DP +A EA+ M+G+R + V +A + RK P MR+
Sbjct: 190 FVEFDDPRDADEARDAMDGQRLGSNYVEVEVAKQRRKSPRTMRR 233
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + D P +R F+RFG ++DVYLP DYYT EPRGF FV+F D +A +A
Sbjct: 13 SLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY-GGPRSSYYGRYRSRSLSR 178
MNG G I V +A + R P M R++ +GG +Y P + RY S+S SR
Sbjct: 73 MNGSEIDGSRIEVFVAQKGRSDPRHM--RYKEKGGYAYRKNPDNKIRRRYISKSNSR 127
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 63/86 (73%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL+VRN+PLD R E+LRA FE++G ++DVY+P+DYYT PRGF F++F + +A +A ++
Sbjct: 52 SLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYN 111
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
++ GREISV + E RK P +M
Sbjct: 112 LDRSVVNGREISVTFSREGRKTPRDM 137
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ + P +R FER+G VRDVYLP DYYT PRGF FV+++DP +A +A +
Sbjct: 91 SLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMDPRDAQDAVNR 150
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRG-GSSYGGPRSSY 167
++G G I VV+A + RK PE MR+ R G G GGP S Y
Sbjct: 151 LDGSLLDGSTIRVVVAHDRRKSPETMRRIQRDSGRGPRMGGPPSRY 196
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 59/86 (68%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LVRN+ E+LR FE+FG V+DVY+P DY T EPRGFAF++ EA EA
Sbjct: 14 SVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEAIAG 73
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
++GK GR I V+LAA+ RKRPEEM
Sbjct: 74 LDGKDLDGRVIKVLLAAQKRKRPEEM 99
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ R ++++ F FG VRDVYLP D+ T +PRGFAFV+F DP +AA A+
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDR 93
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
++G GR ISV+ A E RKRP+EM + R G
Sbjct: 94 LDGYNLDGRNISVLYAQEKRKRPDEMVHKERVEG 127
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ + P +R FER+G VRDVYLP DYYT PRGF FV+++DP +A +A ++
Sbjct: 87 SLLVRNLRFETSPSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYMDPRDAEDAVNN 146
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
++G G I VV+A + RK PE MR+
Sbjct: 147 LDGSVLDGSTIRVVVAHDRRKSPETMRK 174
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%)
Query: 55 RRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPY 114
RR+ SLL RN+ E+LR ER+G +RD+YLPKD+ TGEPRG FV+F DP
Sbjct: 23 RRERDPSTSLLFRNLSKTTTTEDLRHYAERYGPIRDIYLPKDFQTGEPRGLGFVEFSDPK 82
Query: 115 EAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQ 150
+A EA+H M+G AGR ISV A RKRPE+ R
Sbjct: 83 DAEEARHCMDGSTVAGRVISVTFAQHGRKRPEDYRN 118
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + D P +R F++FG ++DVYLP DYYT EPRGF FV+F DP +A +A
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYG-RYRSRSLSRSRS 181
MNG G I V +A + R P MR + + G P Y R R R +S+S S
Sbjct: 73 MNGSEIDGNRIEVFVAQKGRSDPRLMRYKEKGGGIPPGPYPYRKYSDYRIRKRYISKSNS 132
Query: 182 PH 183
H
Sbjct: 133 RH 134
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRNI D R E+LR F R+G + DVY+P DYYT PRGFA+VQF D +A +A H+
Sbjct: 11 SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPR 164
++ K GR+I + A RK P +M+ + G S+YG R
Sbjct: 71 LDKKWICGRQIEIQFAQGDRKTPNQMKAKE---GRSTYGSSR 109
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRNI D R E+LR F R+G + DVY+P DYYT PRGFA+VQF D +A +A H+
Sbjct: 11 SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPR 164
++ K GR+I + A RK P +M+ + G S+YG R
Sbjct: 71 LDKKWICGRQIEIQFAQGDRKTPNQMKAKE---GRSTYGSSR 109
>gi|224032465|gb|ACN35308.1| unknown [Zea mays]
gi|414868572|tpg|DAA47129.1| TPA: SR repressor protein [Zea mays]
Length = 160
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 101/177 (57%), Gaps = 25/177 (14%)
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
MN + F GREI+VVLAAESRKRPEEMR R R RG S + G RSSYYGR RSRS P
Sbjct: 1 MNRQVFFGREIAVVLAAESRKRPEEMRSRTRVRGYSGHEGRRSSYYGRSRSRSPRYRGRP 60
Query: 183 HHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGY 242
RSRSY+P PR+ DYS SPRR+ PR P+E + RRSYSP
Sbjct: 61 ----------RSRSYSPAPRRGNDYSASPRRQEAHRSSPPRRLPKEHDEDKKRRSYSPAS 110
Query: 243 DDSAD----RRNPNGNGYGEKSGYEETQAHWRSPPPRGVSRSPSGSRSRSRSADLSP 295
D AD +R+P + G + H RS P+ S SP G SRSRSAD SP
Sbjct: 111 RDDADNVYEKRSPPADSDG-------SPLHRRS--PKEYSGSPPG--SRSRSADDSP 156
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 63/84 (75%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL+RNI L RPE++RA FE+FG ++DVYLP++++T E RGF FV+F P +AA A+ M
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 124 NGKRFAGREISVVLAAESRKRPEE 147
+ + GREIS+V A E+RK P+E
Sbjct: 119 HHQVIGGREISIVYAEENRKTPQE 142
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + D P +R F+RFG ++DVYLP DYYT EPRGF FV+F DP +A A
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEVALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
MNG G + V +A + R P M R++ +GG G Y YRSR
Sbjct: 73 MNGAEIDGNRVEVFVAQKGRSDPRVM--RYKEKGGIPQGQYPYRKYSDYRSR-------K 123
Query: 183 HHPQGSRSRYRSRS 196
+ S SRYRS S
Sbjct: 124 RYISKSNSRYRSYS 137
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 57 KEQNHG-SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
KE+ G S+L+RN+ R E+R FE FG +RDVYLP+DY +G PRGF FV+FV+
Sbjct: 3 KEKTQGYSVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVEEAA 62
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQ-----RHRFRGGSSY---GGPRSSY 167
A +A M+ F G+ I+ A + RK P MR+ HR++ S R
Sbjct: 63 ALDAIRKMDNTTFNGKVITCCEAQDRRKSPNSMRRAYPSSNHRYQANHSQEHRNSKRGQP 122
Query: 168 YGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQ 227
YGR RSRS S G R R +S SY QH D + RR EH P Q
Sbjct: 123 YGRPRSRSRS--------LGMRYR-KSPSYERRYPQHRDDDVYHYRRDNEH-----SPEQ 168
Query: 228 ERGA-EYSR-RSYSPGYDDSADRRNPNGNG 255
+R Y R R+ SP + D D R P G G
Sbjct: 169 QRVYRRYGRERARSPMHRDDRDYREPRGRG 198
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 3/104 (2%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRNI D R E+LR F R+G + DVY+P DYY PRGFA+VQF D +A +A
Sbjct: 9 NSSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPR 164
H+++ K GR+I + A RK P +M+ + G S+YG R
Sbjct: 69 HNLDKKWICGRQIEIQFAQGDRKTPHQMKAKE---GSSTYGSSR 109
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 65/92 (70%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
R+ + SLLVRN+ ++LR E++G +RDVY+PKDYY+GEPRG F++F DP +
Sbjct: 8 RERADGCSLLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIGFLEFTDPRD 67
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
A +A + ++ K G+E+SVVLA + RKRP++
Sbjct: 68 AEDAIYGLDRKVIQGKEVSVVLALQGRKRPDD 99
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+P D EE+R FE +G VRDVY+PKDY+T P+GFAFV+F DP EA A+
Sbjct: 2 SLLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFPDPREAELAEDK 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
++ R G E+SV +A + RK P +Q
Sbjct: 62 LDKTRLCGVEVSVQVAKQKRKDPSFFQQ 89
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 20/147 (13%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N SLL++N+ P+++R F+ FG VRDVYLP D+YT PRGF FV++ +P A E
Sbjct: 3 ENGCSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAKE 62
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYR------ 172
A +N + G E+ +++A RK PE M+ RS + GRYR
Sbjct: 63 ALITLNHTKIDGNEVKIIIAQNRRKSPETMKMYQ-----------RSVHKGRYRGHPYRS 111
Query: 173 ---SRSLSRSRSPHHPQGSRSRYRSRS 196
+ + R R + +G R YRS+S
Sbjct: 112 DSSGKRIHRKRDKSNEEGRRKYYRSKS 138
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N SLL++N+ PE++R F+ FG +RDVYLP D+YT PRGF FV++ +P A E
Sbjct: 3 ENGCSLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYAKE 62
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
A +N + G+EI +++A RK PE M+
Sbjct: 63 AMSILNHSKIDGKEIKIIIAQNRRKSPETMK 93
>gi|82541600|ref|XP_725030.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479883|gb|EAA16595.1| PR264 [Plasmodium yoelii yoelii]
Length = 121
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + + P +R F++FG ++DVYLP DYYT EPRGF FV+F DP +A EA
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAXEALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYG 161
MNG I V +A + R P MR + R GGS YG
Sbjct: 73 MNGXELXXNRIEVFVAQKGRSDPRIMRYKER-GGGSGYG 110
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 58/92 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRNI D +EL F R+G ++DVY+P+DYY PRGFA+VQF D ++A +AQ
Sbjct: 10 NKSLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQ 69
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
M+G++ GR I V A RK P MR R
Sbjct: 70 EGMDGRKVCGRFIDVQFAKGDRKSPGSMRTRD 101
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + D P +R F+++G ++DVYLP DYYT EPRGF FV+F DP +A +A
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
MNG G I V +A + R P MR + +
Sbjct: 73 MNGSEIDGNRIEVFVAQKGRSDPRLMRYKEK 103
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
R ++ H SLLVRN+ + P++LRA F RFG +RDVYLP DYYT +PRGF FV+F +
Sbjct: 6 RHDRRHASLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFFSHSD 65
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEM 148
A EA M G G +I V +A R P +M
Sbjct: 66 ADEAMREMFGYELDGNKIEVFVAKHGRSDPYQM 98
>gi|156098735|ref|XP_001615383.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804257|gb|EDL45656.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1057
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+N SLL++N+ PE++R F+ FG +RDVYLP D+YT PRGF FV++ +P A E
Sbjct: 3 ENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYEPQYAKE 62
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMRQ-RHRFRG---GSSYGG 162
A +N + G+EI +++A RK PE M+ +H +G G++ GG
Sbjct: 63 ALTILNHSKIDGKEIKIIIAQNRRKSPETMKMYQHGAQGTPIGATVGG 110
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E SL+VRN+ D P+ +R+ F R+G +RDVYLP DY +G PRGF FV+F DP +
Sbjct: 64 EGESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPRDVV 123
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQ 150
EA++ M+GK G I V +A RK P MR+
Sbjct: 124 EAKNAMDGKVVDGNAIQVDIAQRGRKSPRTMRR 156
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LVRNIPL ++LR FE+FG +RDVY+P+DYYT RGF F++F D +A EA +
Sbjct: 1 SVLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 60
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
++ GREI+V L+ E RK P +M
Sbjct: 61 LDKTSIDGREINVCLSKEGRKTPRDM 86
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 60/93 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D EA +A
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVREAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 69 YNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|70928216|ref|XP_736352.1| Ser/Arg-rich splicing factor [Plasmodium chabaudi chabaudi]
gi|56510813|emb|CAH84192.1| Ser/Arg-rich splicing factor, putative [Plasmodium chabaudi
chabaudi]
Length = 129
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R + + P +R F++FG ++DVYLP DYYT EPRGF FV+F DP +A EA
Sbjct: 13 SLLIRKLKFNTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEEALKE 72
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
MNG G I V +A + R P MR +
Sbjct: 73 MNGSEIDGNRIEVFVAQKGRSDPRVMRYKE 102
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRNI + RP++LR F RFG V DVY+P DYY PRGFA++QF D +A +A
Sbjct: 7 NASLFVRNIADNIRPDDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFEDTRDAEDAL 66
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
+ M+ K GR I V AA RK P +MR +
Sbjct: 67 YAMDRKWICGRYIEVQFAAGDRKTPNQMRTKE 98
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 60/93 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 69 YNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 61/93 (65%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRNI + RPE+LR F R+G + DVY+P D+YT +PRGFA++QF D +A +A
Sbjct: 9 NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
H ++ K GR+I + A RK P +M+ + R
Sbjct: 69 HSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKER 101
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRNI + RPE+LR F R+G + DVY+P D+Y+ PRGFA++QF D +A +A H+
Sbjct: 11 SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALHN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYY 168
++ K GR+I + A RK P +M+ + R PRSS Y
Sbjct: 71 LDRKWVCGRQIEIQFAQGDRKTPGQMKNKER-------SSPRSSRY 109
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 61/93 (65%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRNI + RPE+LR F R+G + DVY+P D+YT +PRGFA++QF D +A +A
Sbjct: 9 NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
H ++ K GR+I + A RK P +M+ + R
Sbjct: 69 HSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKER 101
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
++ K GR+I + A RK P +M+ +
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 244
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 56/89 (62%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R++ + P +R FERFG +RDVYLP D++T PRGF FV++V+ +A A
Sbjct: 14 SLLIRSLRFETPPSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGFVEYVEESDALAAIQR 73
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
MNG G +I V A E RK PE MR R
Sbjct: 74 MNGANLDGSQIHVTFAQEGRKSPESMRHR 102
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35; AltName:
Full=Splicing factor, arginine/serine-rich 13B; AltName:
Full=Splicing factor, arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 69 YNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKCICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMR 149
H+++ K GR+I + A RK P +M+
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMK 97
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus adamanteus]
Length = 234
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 60/93 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ RPE+LR F R+G V DVY+P D+YT PRGFA++QF D +A +A
Sbjct: 9 NTSLFVRNVADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 69 YNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ + ++L+ F R G VRDVY+P+D+++ +P+GFAF+++ P +A EA+
Sbjct: 190 SLLVRNVNGEISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATPEQAREARDE 249
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
MN GREI VV A E RK P EMR R
Sbjct: 250 MNHFMMKGREIEVVYAQEKRKTPNEMRGR 278
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRN+ RPE+LR F R+G + DVY+P D+YT PRGFA++QF D +A +A ++
Sbjct: 11 SLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAEDALYN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N K GR+I + A RK P +M+ + R
Sbjct: 71 LNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D + E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +++ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQIKAK 99
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAF 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+RN+ + P+ +R FE+FG VRDVYLP D++T PRGF FV+F + A EA
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
M+ G E+ V++A + RK PE MR+
Sbjct: 66 MDRTMIDGNEVHVIIAQDRRKSPETMRR 93
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+RN+ + P+ +R FE+FG VRDVYLP D++T PRGF FV+F + A EA
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
M+ G E+ V++A + RK PE MR+
Sbjct: 66 MDRTMIDGNEVHVIIAQDRRKSPETMRR 93
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRN+ RPE+LR F R+G + DVY+P D+Y+ PRGFA+VQF D +A +A ++
Sbjct: 11 SLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVRDAEDALYN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N K GR+I + A RK P +M+ + R
Sbjct: 71 LNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A K P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDLKTPNQMKAK 99
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D A +A
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 69 YNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LVRN+ PE +R FE+FG +RDVYLP D++T +PRGF FV+F A EA
Sbjct: 9 SVLVRNLLETTTPELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYKLESAKEAVKE 68
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
M+ K G +SV A + RK PE MR+
Sbjct: 69 MDNKTIDGATVSVTPAQDRRKSPESMRR 96
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Query: 61 HGSLLVRNIPLDC-RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ SL VRN+P D R E++R F ++G + D+Y+P DYYT EPRGFA+VQF D +A +A
Sbjct: 11 NTSLYVRNLPDDVSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQFDDIRDAEDA 70
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+ ++ RF GRE+ + A RK P +MR + R
Sbjct: 71 MYALDRYRFYGRELEIQYAEGDRKTPTQMRGKER 104
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 58/88 (65%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+P RPE+LR+ F ++G + DVY+P DYY PRGFA+VQF D +A +A
Sbjct: 31 NSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAM 90
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEM 148
+ ++ RF GRE+ + A RK P EM
Sbjct: 91 YSLDRTRFYGRELEIEFAQGDRKTPSEM 118
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%)
Query: 66 VRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
VRN D RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A +++N
Sbjct: 2 VRNCAGDSRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNR 61
Query: 126 KRFAGREISVVLAAESRKRPEEMRQRHR 153
K GR+I + A RK P +M+ + R
Sbjct: 62 KWVCGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|413947426|gb|AFW80075.1| hypothetical protein ZEAMMB73_562035 [Zea mays]
Length = 661
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 66 VRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
+ I L P++LR PF +FG V+D+YL DYYT EPRGF F+Q DP +A++A++HM+G
Sbjct: 580 LMQIGLKGWPDDLRRPFGKFGPVKDIYLSNDYYTREPRGFGFIQNFDPEDASDAKYHMDG 639
Query: 126 KRFAGREISVVL 137
K GREI VVL
Sbjct: 640 KMLLGREIVVVL 651
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +RNI + RPE+LR F R+G V DVY+P D+Y+ PRGFA++QF D +A +A H+
Sbjct: 11 SLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALHN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
++ K GR+I + A RK P +M+
Sbjct: 71 LDRKWVCGRQIEIQFAQGDRKTPNQMQ 97
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R +LR F R+G V DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMR 149
H+++ K GR+I + A RK P +M+
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMK 97
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K G +I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGHQIEIQFAQGDRKTPNQMKAK 99
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAKE 100
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 70/133 (52%), Gaps = 14/133 (10%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
G GR ++ +L VR + RP++LRA FER G VRDVY+P DYYT E RGFA+V+F
Sbjct: 3 GRSGRYRDDEIPTLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGR 170
+A +A +NG GR I V A RK EMR R Y
Sbjct: 63 EFTRDAEDALRKLNGASILGRPIEVEWAEGQRKTKTEMRARDS--------------YSS 108
Query: 171 YRSRSLSRSRSPH 183
YR R+ RSRSPH
Sbjct: 109 YRVRNRYRSRSPH 121
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VRN+ RPE+LR F R+G + DVY+P D+Y PRGFA++QF D +A +A ++
Sbjct: 11 SLFVRNVGDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFEDVRDAEDALYN 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N K GR+I + A RK P +M+ + R
Sbjct: 71 LNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
H+++ K GR+I + A RK P +M+ +
Sbjct: 69 HNLDRKWICGRQIEIQFAQGDRKTPNQMKDKE 100
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R++ D +R FERFG +RDVYLP DY + PRGF FV++V+ +A A
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G G I+V A E RK PE MR R
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHR 102
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R++ D +R FERFG +RDVYLP DY + PRGF FV++V+ +A A
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G G I+V A E RK PE MR R
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHR 102
>gi|443711870|gb|ELU05439.1| hypothetical protein CAPTEDRAFT_124300 [Capitella teleta]
Length = 135
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF----VDPYEA 116
+ SL VRN+P R EELR+ F ++G + DVYLP D+YT PRGF+++Q+ +DP +A
Sbjct: 9 NTSLYVRNVPDTTRSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYPSFSIDPRDA 68
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +H++ RF G ++ + A RK P +MR + R
Sbjct: 69 EDALYHLDRTRFFGCDLEIEFARGDRKTPSQMRTKER 105
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A
Sbjct: 9 NTSLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVRDAEDAL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
+++ K GR++ + A RK P +M+ +
Sbjct: 69 RNLDRKWICGRQMEIQFAQGDRKTPNQMKAK 99
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+RN+ + P+ +R FE+FG VRDVYLP D++T PRGF FV+F + A EA
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEEAAAQEAMRE 65
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
M+ G E+ V++A + RK PE MR RH
Sbjct: 66 MDRTMIDGNEVYVIIAQDRRKSPETMR-RH 94
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 54/89 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+R++ D +R FERFG +RDVYLP DY + PRGF FV++V+ +A A
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 87
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G G I+V A E RK PE MR R
Sbjct: 88 MDGATLDGVTINVTFAQEGRKSPESMRHR 116
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+P RP++LR+ F ++G + DVY+P DYYT PRGFA+VQF D +A +A
Sbjct: 10 NSSLFIRNVPDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQFEDLRDAEDAM 69
Query: 121 HHMNGKRFAGREISVVLAAESRKRP 145
+ ++ RF GRE+ + A RK P
Sbjct: 70 YSLDRTRFYGRELEIEFAQGDRKTP 94
>gi|226481705|emb|CAX79118.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ RF GR+I V RK P EMR + R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|449684562|ref|XP_002161704.2| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Hydra magnipapillata]
Length = 131
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 58/91 (63%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+ R ++LR F ++G +RD+Y+P DYYT EPRGF +VQF D +A +A
Sbjct: 11 NTSLYIRNLSSSTRSDDLRRMFAKYGPIRDIYIPLDYYTREPRGFCYVQFEDIRDAEDAL 70
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
+H + R GRE+ + A RK P +MR R
Sbjct: 71 YHESHARLHGRELDIQYAEGDRKTPGQMRTR 101
>gi|327261517|ref|XP_003215576.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Anolis
carolinensis]
Length = 261
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-----FVDPYE 115
+ SL VRN+ RPE+LR F R+G V DVY+P D+YT PRGFA++Q F D +
Sbjct: 9 NTSLFVRNVADATRPEDLRHEFGRYGPVVDVYVPLDFYTRRPRGFAYIQYPLFMFEDVRD 68
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 AEDALYNLNRKWVCGRQIEIQFAQGDRKTPNQMKSKER 106
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L VR + RP++LRA FE+ G VRDVY+P DYYT E RGFA+V+F +A +A
Sbjct: 15 TLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRE 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
+NG GR I V A RK EMR R Y YR R+ RSRSP
Sbjct: 75 LNGTSILGRRIEVEWAEGQRKTKTEMRARDS--------------YNSYRVRNRYRSRSP 120
Query: 183 H 183
+
Sbjct: 121 Y 121
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDP 113
+ SL VRN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D
Sbjct: 9 NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDV 68
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 RDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|29841102|gb|AAP06115.1| similar to NM_080743 serine-arginine repressor protein (35 kDa) in
Homo sapiens [Schistosoma japonicum]
gi|226476576|emb|CAX72180.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481266|emb|CAX79098.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481268|emb|CAX79099.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481270|emb|CAX79100.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481274|emb|CAX79102.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481276|emb|CAX79103.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481278|emb|CAX79104.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481280|emb|CAX79105.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481282|emb|CAX79106.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481284|emb|CAX79107.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481286|emb|CAX79108.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481288|emb|CAX79109.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481292|emb|CAX79111.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481294|emb|CAX79112.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481300|emb|CAX79114.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481699|emb|CAX79115.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481701|emb|CAX79116.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ RF GR+I V RK P EMR + R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 6/99 (6%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ------FVDPY 114
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLLFIFEDVR 68
Query: 115 EAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 DAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 107
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 53/86 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ + PE LR FE+FG +RDVY+P +YYT +PRGF FV+F D +A A
Sbjct: 36 SLLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFHDFRDANMALRE 95
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
M+G G +I V A R P +M
Sbjct: 96 MDGGELDGNKIEVFAAKRGRSDPYQM 121
>gi|226476570|emb|CAX72177.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481290|emb|CAX79110.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226481296|emb|CAX79113.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ RF GR+I V RK P EMR + R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|226481272|emb|CAX79101.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 210
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFGNPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ RF GR+I V RK P EMR + R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDP 113
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDV 68
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 RDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDP 113
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDV 68
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 RDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|256076749|ref|XP_002574672.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|360045341|emb|CCD82889.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 210
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ RF GR+I V RK P EMR + R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|226481703|emb|CAX79117.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 115
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR----FRGGSSY 160
M+ RF GR+I V RK P EMR + R RGG Y
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKERRDEPHRGGRKY 108
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+P + ++LR FE++G + DVY+P+D TGEPRGFAFV+F+D +A +A
Sbjct: 28 TLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDR 87
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+G+ FAGRE+ + A ++RPE
Sbjct: 88 MDGEFFAGRELRIQYA--KKRRPE 109
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF-VQFVDPYEAAEA 119
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+ V F D +A +A
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDA 68
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 69 LYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 102
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 7/98 (7%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDPYE 115
SL VRNI + RPE+LR F R+G + DVY+P D+YT PRGFA++Q F D +
Sbjct: 11 SLFVRNIADESRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFFHMFEDVRD 70
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
A +A H+++ K GR+I + A RK P +M+ + R
Sbjct: 71 AEDALHNLDRKWVCGRQIEIQFAQGDRKTPNQMKAKER 108
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +
Sbjct: 9 NTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDXL 68
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+ K GR+I + A RK P +M+ + R
Sbjct: 69 FITHRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
>gi|226476572|emb|CAX72178.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
gi|226476574|emb|CAX72179.1| FUS-interacting serine-arginine-rich protein 1 [Schistosoma
japonicum]
Length = 125
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 60/91 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL +R++P CR ++LR F R+G + DV +P D++TG +G+AF++F +P +A +A ++
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEFENPRDAEDAHYY 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ RF GR+I V RK P EMR + R
Sbjct: 67 MDHTRFMGRDIEVEFTRGYRKTPAEMRLKER 97
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ---------FV 111
+ SL VRN+ RPE+LR F R+G + DVY+P D+YT PRGFA++Q F
Sbjct: 9 NTSLFVRNVTDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFHSLVIFE 68
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
D +A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 DVRDAEDALYNLNKKWVCGRQIEIQFAQGDRKTPGQMKSKER 110
>gi|344264100|ref|XP_003404132.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Loxodonta
africana]
Length = 387
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
R QN + PL +PE+LR F R+G + DVY+P D+YT PRGFA+VQF D +
Sbjct: 130 RGAQNAHFAVAEVPPLLQQPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRD 189
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 190 AEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 227
>gi|414868574|tpg|DAA47131.1| TPA: hypothetical protein ZEAMMB73_186752, partial [Zea mays]
Length = 169
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
Query: 16 GSAMRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRP 75
G MRRYSPPY SPPRRGYGGRGRS GYG RKE + GSLLVRNIPL R
Sbjct: 70 GKTMRRYSPPYRSPPRRGYGGRGRS-----PPPPRRGYGGRKEGS-GSLLVRNIPLSVRA 123
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEP 102
E+LR PFERFG VRDVY+PKDYY+G P
Sbjct: 124 EDLRVPFERFGPVRDVYIPKDYYSGIP 150
>gi|413950003|gb|AFW82652.1| hypothetical protein ZEAMMB73_474332 [Zea mays]
Length = 221
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
EPRGF F+Q+ DP +A++A++HM+GK GRE VV A E+RK+P +MR R + G
Sbjct: 85 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGRETVVVFAEENRKKPSDMRAREKISGRG-- 142
Query: 161 GGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISP 211
SY GR RSRS + SP R R +SRSY+P +Q YS SP
Sbjct: 143 ----RSYDGRLRSRSPGLNDSPR----GRLRSQSRSYSPALKQKH-YSRSP 184
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+RN+ P+ ++ FERFG +RDVYLP DY T PRGF FV++ + + EA
Sbjct: 8 SLLIRNLRYSTSPQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFVEYYEKEDVLEAVKA 67
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
M+ G I+ LA + RK P MR+ +R
Sbjct: 68 MDNADLDGSVITCCLAQDRRKSPNSMRRAYR 98
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
Q SLLVRN+ PE +R+ F G V+DVYLP DY++ PRGF FV+F +A
Sbjct: 7 QQRMSLLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAER 66
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A M+G G+ I V +A + R P++M+QR
Sbjct: 67 ALEKMDGFELDGKAIEVAIAKKGRSAPQQMKQR 99
>gi|241779177|ref|XP_002399858.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508537|gb|EEC17991.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 209
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ---FVDPY-EA 116
+ SL +RN+P RPE+LR+ F ++G + DVY+P DYY PRGFA+VQ F+D +A
Sbjct: 10 NSSLFIRNVPDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQYPLFLDHLRDA 69
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEM 148
+A + ++ RF GRE+ + A RK P EM
Sbjct: 70 EDAMYSLDRTRFYGRELEIEFAQGDRKTPSEM 101
>gi|294933968|ref|XP_002780925.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
gi|239891072|gb|EER12720.1| FUS-interacting serine-arginine-rich protein, putative [Perkinsus
marinus ATCC 50983]
Length = 137
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%)
Query: 78 LRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVL 137
LR FE++G +RDVY+P DYY+ PRGF FV+F DP +A EA+ M+GKR G I V +
Sbjct: 3 LREAFEKYGEIRDVYIPLDYYSRRPRGFGFVEFSDPRDADEAKAAMDGKRIGGNAIEVEI 62
Query: 138 AAESRKRPEEMR 149
A E RK P+ MR
Sbjct: 63 AKERRKSPKTMR 74
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREI 133
RP++LRA FER G VRDVY+P DYYT E RGFA+V+F +A +A +NG GR I
Sbjct: 6 RPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRPI 65
Query: 134 SVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPH 183
V A RK EMR R Y YR R+ RSRSPH
Sbjct: 66 EVEWAEGQRKTKTEMRARDS--------------YSSYRVRNRYRSRSPH 101
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLL+RN+ D + ++L F R G VRDVY+P+D+++ +P+GFAF+++ +A EA+
Sbjct: 19 SLLIRNVAPDIQSQDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATAEQAREARDE 78
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
M+ GRE+ VV A E RK P EMR
Sbjct: 79 MDRFVVRGRELEVVFAQERRKTPTEMR 105
>gi|62733241|gb|AAX95358.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 384
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 110/247 (44%), Gaps = 62/247 (25%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR----------Q 150
EPRGFAFV+F +A++A++HMN K +GREISV A ++RKRPEEMR Q
Sbjct: 1 EPRGFAFVEFAHSSDASKARYHMNRKMLSGREISVAFAVQTRKRPEEMRRIIGARHNSPQ 60
Query: 151 RHRFRGGSSYGGP--------RSSYYGRYRSR---SLSRSRSPHHPQGSR---------- 189
R +S G P R SY +Y+ R + R +P P R
Sbjct: 61 RKEECRTNSPGQPKGHDEKRKRRSYTPKYKDRQYADIGRDETPPAPDSERPWALCRSPRP 120
Query: 190 --------------------SRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQER 229
R+RS +P P + +D SP+R+ EH G Q +
Sbjct: 121 SPPGQSHSRSYSRSHSLHLHDHARTRSCSPAPGRQDDQYASPQRK--EHQTKSSG--QTK 176
Query: 230 GAEYSRRSYSPGYDDSADRRNPNGNGYGEKSGY---EETQAHWRSPPPRGVSRSPSGSRS 286
G + RRSY+P Y++ D NG+ E E + RSP P RS S S
Sbjct: 177 GHDDMRRSYTPEYNECQD----ADNGFDETPPAPDGERSSVLGRSPRPSPPGRSHCHSHS 232
Query: 287 RSRSADL 293
RSRS +L
Sbjct: 233 RSRSPEL 239
Score = 37.0 bits (84), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 163 PRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSP 222
PR S GR S SRSRSP R RSRS +P + ++ S SP+RR +H
Sbjct: 218 PRPSPPGRSHCHSHSRSRSPE----LRGHARSRSCSPATGRQDNQSTSPQRRE-KHQTKS 272
Query: 223 RGPPQERGAEYSRRSYSPGYDDSADRRNPNGNGYGEKSGYEETQAHW---RSPPP 274
G Q + + RRSY+P Y+D D NGY + + + W RSP P
Sbjct: 273 SG--QAKEHDEKRRSYTPEYNDRRD----ADNGYDQTPPAPDGERSWALGRSPQP 321
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 37 RGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKD 96
R RSP RRG G YG NH SL+VR E++ F ++G V DV++P+D
Sbjct: 82 RSRSPVRRG---GAERYG--TNPNHCSLIVRGFRDVVDRSEIQNIFSKYGNVHDVHIPRD 136
Query: 97 YYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEM 148
YYT + RGFAF++F + +A +A H++G+ G +SV +A +RK EM
Sbjct: 137 YYTHKQRGFAFIEFENREQAEDAISHLDGRSVCGSTVSVSIAKNNRKTSAEM 188
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV+N+ + P+++R+ F R+G +RDVYLP DYYT +PRGF FV+F +A EA
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRG 73
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
M+G+ G ++ V A R P EM
Sbjct: 74 MDGEEIDGNKVEVFPAKHGRSDPREM 99
>gi|325191972|emb|CCA26441.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 248
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERF-GVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
SLLVRN+ ++LR F R G +RDVY+PKD+ T E R FAFV+F D EA E ++
Sbjct: 144 SLLVRNLNPKTTGDDLRRAFSRRPGDIRDVYIPKDHSTNELRTFAFVEFRDAREAREVKY 203
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQ 150
M+ G EI+V+ A + RK P++MR
Sbjct: 204 EMDRTTLDGNEIAVLFAQQRRKTPDQMRD 232
>gi|397567508|gb|EJK45626.1| hypothetical protein THAOC_35749 [Thalassiosira oceanica]
Length = 359
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 83/162 (51%), Gaps = 30/162 (18%)
Query: 13 VQEGSAMRRYSPPYYSPPRRGYGGRGRSPPRRGYGG--GGGGY--------------GRR 56
V G A R Y PP + RR YG PPR Y G GGGY G R
Sbjct: 96 VVLGRARRDYGPPDHY--RRDYG-----PPRGYYDGPPHGGGYRDMGPGPGDRGRGGGDR 148
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPR-------GFAFVQ 109
++ + SLLVRN+ + ++L+ F R G VRDVY+P DY++ +P+ GFAF++
Sbjct: 149 RDDGNVSLLVRNVSSEITSQDLQQAFSRIGEVRDVYIPMDYHSHQPKVRAFNDPGFAFIE 208
Query: 110 FVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
+ P A EA+ M+ + G + VV A + RK P EMR R
Sbjct: 209 YATPAMAREAREEMDRFKIKGCNLEVVFAQQKRKTPHEMRGR 250
>gi|301106558|ref|XP_002902362.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098982|gb|EEY57034.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 373
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFER-FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
SLLVRN+ D +ELR F R G + DVY+PK+Y + PRGFAF++F D + +
Sbjct: 112 SLLVRNLSPDTTGDELRRAFSRRAGDILDVYIPKEYSSNRPRGFAFIEFADARVGRDVKF 171
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMR 149
M+ + GREI+V+ A + RK P+EMR
Sbjct: 172 EMDRTQLGGREIAVLFAKQHRKSPQEMR 199
>gi|255084900|ref|XP_002504881.1| predicted protein [Micromonas sp. RCC299]
gi|226520150|gb|ACO66139.1| predicted protein [Micromonas sp. RCC299]
Length = 85
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVR +P D R EEL F ++G V DVY+P+DYYT P+G AFVQF +P EAA+A+
Sbjct: 1 SLLVRQLPPDARAEELEEAFSKYGKVIDVYIPRDYYTKRPKGIAFVQFPNPEEAADAERA 60
Query: 123 MNGKRFAGRE-ISVVLAAESRKRP 145
++G G E ISV +A + RK P
Sbjct: 61 LDGTTLCGVENISVQVALQKRKDP 84
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + D E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H
Sbjct: 95 GKLRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 154
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQR 151
+++ K GR+I + A RK P +M+ +
Sbjct: 155 NLDRKWICGRQIEIQFAQGDRKTPNQMKAK 184
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ VRN+ D R E+LR FE++G + DVY+P DYYT EPRGFA+VQF +A +A
Sbjct: 11 SVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDDAEDAVDG 70
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
++G GR+I A RK P +MR +
Sbjct: 71 LDGTTLFGRQIFCKNARGGRKTPHQMRYK 99
>gi|219888887|gb|ACL54818.1| unknown [Zea mays]
gi|414887750|tpg|DAA63764.1| TPA: splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 138
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRG---- 156
+PRGF FVQ+ DP +AA+A+++M+G+ GR+I+VV A E+RK+P+EMR R R RG
Sbjct: 5 DPRGFGFVQYYDPADAADAKYYMDGQVVLGRQITVVFAEENRKKPQEMRARDRVRGHSYD 64
Query: 157 --GSSYGGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISP 211
S Y GR SRS S SRSP PQ R R R RSY+ P S SP
Sbjct: 65 DRRYSRSRSPRYYRGRSPSRSQSYSRSP--PQNPRHRLRERSYSGSPVDSRSRSGSP 119
>gi|414868573|tpg|DAA47130.1| TPA: hypothetical protein ZEAMMB73_186752, partial [Zea mays]
Length = 148
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 63/85 (74%), Gaps = 6/85 (7%)
Query: 16 GSAMRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRP 75
G MRRYSPPY SPPRRGYGGRGRS GYG RKE + GSLLVRNIPL R
Sbjct: 70 GKTMRRYSPPYRSPPRRGYGGRGRS-----PPPPRRGYGGRKEGS-GSLLVRNIPLSVRA 123
Query: 76 EELRAPFERFGVVRDVYLPKDYYTG 100
E+LR PFERFG VRDVY+PKDYY+G
Sbjct: 124 EDLRVPFERFGPVRDVYIPKDYYSG 148
>gi|402853376|ref|XP_003891372.1| PREDICTED: serine/arginine-rich splicing factor 10 [Papio anubis]
Length = 261
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ SL VRN+ D R E+LR F R+G + DVY+P D+YT PRG + F D +A +A
Sbjct: 9 NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGL-LITFEDVRDAEDAL 67
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+++ K GR+I + A RK P +M+ +
Sbjct: 68 HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 98
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S L+RN+ P+ +R FE+FG +RDVYLP D+ T PRGF FV+F D +A +A
Sbjct: 8 STLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRA 67
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
M+ G I+ +A + RK P M
Sbjct: 68 MDNTELDGSVITCCIAQDRRKSPSSM 93
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain Shintoku]
Length = 267
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S LVRN+ P+ +R FERFG +RDVYLP D+ T PRGF FV++ + +A +A
Sbjct: 8 STLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVKA 67
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
M+ G I+ LA + RK P M
Sbjct: 68 MDNTDLDGSIINCCLAQDRRKSPSSM 93
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V NI C PEELR FE G + DVY+P+D TGEPRGFAFV+++D +A A
Sbjct: 3 TLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDR 62
Query: 123 MNGKRFAGREISV 135
++G RF GRE+ +
Sbjct: 63 LDGTRFNGRELRI 75
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S L+RN+ P+ +R FE+FG +RDVYLP D+ T PRGF FV+F D +A +A
Sbjct: 8 STLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVRA 67
Query: 123 MNGKRFAGREISVVLAAESRKRPEEM 148
M+ G I+ +A + RK P M
Sbjct: 68 MDNTELDGSVITCCIAQDRRKSPSSM 93
>gi|241100004|ref|XP_002409732.1| conserved hypothetical protein [Ixodes scapularis]
gi|215492805|gb|EEC02446.1| conserved hypothetical protein [Ixodes scapularis]
Length = 211
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF-VDPYEAAEA 119
+ SL VRN+P RPE+LR+ F + G + DVY+P DY+T PRGF +VQ+ + +A +A
Sbjct: 10 NSSLFVRNLPDGTRPEDLRSFFSKHGPLTDVYIPMDYHTRRPRGFGYVQYPLYLRDAEDA 69
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEM 148
++ ++ RF GREI + A RK P EM
Sbjct: 70 KYALDKARFCGREIEIEFARGDRKTPTEM 98
>gi|238009116|gb|ACR35593.1| unknown [Zea mays]
Length = 171
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 108/179 (60%), Gaps = 16/179 (8%)
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
MN + FAGREI+VVLAA++RKRPE+MR+R RG S + G R + +G RSRS S SRS
Sbjct: 1 MNRQMFAGREITVVLAADTRKRPEDMRRRTGPRGYSGHEGRRPNRHGAGRSRSRSYSRS- 59
Query: 183 HHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPGSPRGPPQERGAEYSRRSYSPGY 242
R R RS+SY+P P++ +DYS SP R EHP S + P + RRSY+P
Sbjct: 60 -RSPRPRGRGRSQSYSPAPKRRDDYSASPPRAKEEHPRSSKQPKE--NNRDRRRSYTP-- 114
Query: 243 DDSADRRNPNGNGYGEK----SGYEETQ---AHWRSPPPRGVSRSPSGSRSRSRSADLS 294
DD DRR + NG E+ +G E+ + H RSP P S SP GSRSRS S +S
Sbjct: 115 DDINDRRGAD-NGRDERKRSPAGEEDEEPRRGHHRSPRP--ASMSPPGSRSRSASPAIS 170
>gi|413920160|gb|AFW60092.1| hypothetical protein ZEAMMB73_401962 [Zea mays]
Length = 83
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 YSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGS--LLVRNIPLDCRPEELRAPFER 84
PP RG+GGRGRSPP R +HGS LLVRNIPL CRPEELR PFER
Sbjct: 15 VQPPERGHGGRGRSPPPRRGY-------GGGRGDHGSVSLLVRNIPLRCRPEELRVPFER 67
Query: 85 FGVVRDVYLPKDYYTG 100
FG VRDVYLP+DY+TG
Sbjct: 68 FGPVRDVYLPRDYHTG 83
>gi|194685575|ref|XP_001788719.1| PREDICTED: serine/arginine-rich splicing factor 12, partial [Bos
taurus]
Length = 145
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDP 113
+ SL VRN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D
Sbjct: 9 NTSLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDV 68
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 69 RDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 108
>gi|428172429|gb|EKX41338.1| hypothetical protein GUITHDRAFT_142043 [Guillardia theta CCMP2712]
Length = 137
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
EE+++ FERFG VRDVY+P DY+T P+ FAF++F++ +A +A+ ++ + GR++SV
Sbjct: 20 EEVKSVFERFGKVRDVYIPTDYHTKRPKPFAFIEFLNGDDARDAKDELDNREICGRKVSV 79
Query: 136 VLAAESRKRPEEMRQRH 152
+ A R P++MR R
Sbjct: 80 LYAQRGRTTPDQMRARD 96
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 48/134 (35%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+L+RN+ D P+++R FE G V+DVYLP D+YT +PRGF FV++ + A EA +
Sbjct: 7 SILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKEAINI 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
+N R G EI +++A RK P+ M+ H +Y + Y ++ S+
Sbjct: 67 LNHSRIDGNEIRIIIAQNRRKSPDTMKFYHN-EYLYNYRHKDNRKYNNCKNYKRKYSKYY 125
Query: 183 HHPQGSRSRYRSRS 196
+ RSRY+ RS
Sbjct: 126 RTDERDRSRYKRRS 139
>gi|224073164|ref|XP_002304003.1| predicted protein [Populus trichocarpa]
gi|222841435|gb|EEE78982.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 45/57 (78%)
Query: 97 YYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+ EPRGF FVQ+ DP++AAEA+HHM+G+ F GRE++VV A E+RK+P +MR R R
Sbjct: 20 FLLLEPRGFGFVQYADPHDAAEAKHHMDGRVFLGRELTVVFAEENRKKPVDMRARER 76
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREI 133
R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I
Sbjct: 40 RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQI 99
Query: 134 SVVLAAESRKRPEEMRQRH 152
+ A RK P +M+ +
Sbjct: 100 EIQFAQGDRKTPNQMKAKE 118
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L VR + RPE+LR FER G VRDVY+P DYYT E RGFA+V++ +A A
Sbjct: 15 TLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYVKYEYVGDAERAYKQ 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
++G GR I++ A RK EMR++
Sbjct: 75 LHGCAILGRRIAIDWAQGERKTKAEMREK 103
>gi|313229099|emb|CBY18251.1| unnamed protein product [Oikopleura dioica]
Length = 385
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 43 RRGYGGGGGGYGRRKEQNHGS--LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG 100
R+GY G ++KE S L VR I + E+R F+ FG +RDVYLPKDYYT
Sbjct: 106 RKGYKGAAQ---KQKEPAKPSKQLFVRPIDNGTKVSEVRDYFQVFGELRDVYLPKDYYTK 162
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEM 148
E +G A+V++ + +A EAQ M+G F G+ ISV A RK + M
Sbjct: 163 EMKGVAYVEYKEQEDAEEAQAAMDGCEFNGKNISVTFAQGDRKSKDTM 210
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I +
Sbjct: 66 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 125
Query: 136 VLAAESRKRPEEMRQRH 152
A RK P +M+ +
Sbjct: 126 QFAQGDRKTPNQMKAKE 142
>gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis]
Length = 98
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV--DPYEAAE 118
+ SL VRNI + RPE+LR F R+G + DVY+P D+YT +PRGFA++Q++ D +A +
Sbjct: 9 NTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQYIFEDVRDAED 68
Query: 119 AQHHMNGKRFAGREISVVLAAESRK 143
A H ++ K GR+I + A RK
Sbjct: 69 ALHSLDRKWVCGRQIEIQFAQGDRK 93
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ V + R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H++
Sbjct: 1 MYVEILEACFRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 60
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRH 152
+ K GR+I + A RK P +M+ +
Sbjct: 61 DRKWICGRQIEIQFAQGDRKTPNQMKAKE 89
>gi|348680240|gb|EGZ20056.1| hypothetical protein PHYSODRAFT_354260 [Phytophthora sojae]
Length = 251
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFER-FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
Q SLLVRN+ + +ELR F R G + DVY+PK+Y + PRGFAF++F D
Sbjct: 78 QEPISLLVRNLSPETTQDELRRAFSRRAGDILDVYIPKEYNSNRPRGFAFIEFADSRVGR 137
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
+ + M+ + REI+V+ A + RK P+EMR
Sbjct: 138 DIKFEMDRTQLGDREIAVLFAKQHRKSPQEMR 169
>gi|307106243|gb|EFN54489.1| hypothetical protein CHLNCDRAFT_17896, partial [Chlorella
variabilis]
Length = 63
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREI 133
R EE+R FER+G +RDVYLPKDYY+G P+GF F++F+D +A EA ++++ F GREI
Sbjct: 1 RAEEVRGKFERYGPIRDVYLPKDYYSGRPKGFGFIEFLDIRDAEEAIYNLDRTMFGGREI 60
Query: 134 SV 135
V
Sbjct: 61 QV 62
>gi|448878228|gb|AGE46077.1| arginine/serine-rich splicing factor SCL30 transcript III [Zea
mays]
Length = 84
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 61/82 (74%), Gaps = 6/82 (7%)
Query: 19 MRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEEL 78
MRRYSPPY SPPRRGYGGRGRS GYG RKE GSLLVRNIPL R E+L
Sbjct: 1 MRRYSPPYRSPPRRGYGGRGRS-----PPPPRRGYGGRKE-GSGSLLVRNIPLSVRAEDL 54
Query: 79 RAPFERFGVVRDVYLPKDYYTG 100
R PFERFG VRDVY+PKDYY+G
Sbjct: 55 RVPFERFGPVRDVYIPKDYYSG 76
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I +
Sbjct: 99 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 158
Query: 136 VLAAESRKRPEEMRQRH 152
A RK P +M+ +
Sbjct: 159 QFAQGDRKTPNQMKAKE 175
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGALLDGRELRVQMA 90
>gi|237833159|ref|XP_002365877.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
gi|211963541|gb|EEA98736.1| hypothetical protein TGME49_072440 [Toxoplasma gondii ME49]
Length = 170
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
+E+RA FE FG +RDVYLP DY+TGEPRGF FV+F +A +A H ++ G I V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 136 VLAAESRKRPEEM 148
+A + R P +M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|221488339|gb|EEE26553.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221508841|gb|EEE34410.1| RRM domain-containing protein [Toxoplasma gondii VEG]
Length = 170
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
+E+RA FE FG +RDVYLP DY+TGEPRGF FV+F +A +A H ++ G I V
Sbjct: 6 QEVRAAFEEFGPIRDVYLPLDYHTGEPRGFGFVEFESSKDAYDAMHQLHNTLLNGSTIHV 65
Query: 136 VLAAESRKRPEEM 148
+A + R P +M
Sbjct: 66 TIAKKGRSDPMQM 78
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 54/91 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V NIP D R +EL+ F R+G + LP DYY+G P+GFAFVQF D +A E+
Sbjct: 7 TIYVGNIPEDLRRDELKRIFGRYGNIVAATLPVDYYSGIPKGFAFVQFEDIRDAEESFDR 66
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+ G R R + + A ++K P+EMR R
Sbjct: 67 LQGYRIGKRSLRLEFATGTKKTPDEMRTVTR 97
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
M+G GRE+ V +A R+ + R G S+GG R R S+SR P
Sbjct: 75 MDGAVLDGRELRVQMARYGRR--DLPRSSQEEPSGRSWGGRYGRRSRSPRGRHRSQSRGP 132
Query: 183 HHPQG-SRSRYRSRSYTPVPRQHEDYSISPRRR 214
+ + SRS Y Y+P P + YS SP RR
Sbjct: 133 SYSKSRSRSHYGGSGYSPSPYRRSRYSRSPYRR 165
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NIP++ EE R FE+FG V L +D TG+ RGF FV F++ AA A
Sbjct: 241 NFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAATA 300
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+NGK F G+++ V A + +R EE+R+ + R S Y G
Sbjct: 301 VDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQG 346
>gi|338721847|ref|XP_001504243.3| PREDICTED: serine/arginine-rich splicing factor 10 [Equus caballus]
Length = 153
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I +
Sbjct: 4 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 63
Query: 136 VLAAESRKRPEEMRQRH 152
A RK P +M+ +
Sbjct: 64 QFAQGDRKTPNQMKAKE 80
>gi|402593936|gb|EJW87863.1| hypothetical protein WUBG_01225 [Wuchereria bancrofti]
Length = 103
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L VR + RP++LRA FE+ G VRDVY+P DYYT E RGFA+V+F +A +A
Sbjct: 15 TLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRE 74
Query: 123 MNGKRFAGREISVVLAAESRK 143
+NG GR I V A RK
Sbjct: 75 LNGTSILGRRIEVEWAEGQRK 95
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 83
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 84 MDGRMLDGRELRVQMA 99
>gi|351699563|gb|EHB02482.1| 35 kDa SR repressor protein, partial [Heterocephalus glaber]
Length = 246
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ------FVDPYEAAEAQHHMNGKR 127
RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYNLNRKW 60
Query: 128 FAGREISVVLAAESRKRPEEMRQRHR 153
GR+I + A RK P +M+ + R
Sbjct: 61 VCGRQIEIQFAQGDRKTPGQMKSKER 86
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 26 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 85
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 86 MDGRMLDGRELRVQMA 101
>gi|405969990|gb|EKC34930.1| 35 kDa SR repressor protein [Crassostrea gigas]
Length = 208
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 69/130 (53%), Gaps = 25/130 (19%)
Query: 63 SLLVRNIPLDCRPEE----LRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF-------- 110
SL VRN+P R EE LRA F ++G + DVY+P DYYT +PRGFA+VQ+
Sbjct: 11 SLYVRNVPSTERAEEMAEELRALFGKYGPLTDVYVPVDYYTRDPRGFAYVQYPLFRLTKS 70
Query: 111 ---------VDPY--EAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
V Y +A +A +H++ RF G E+ V A RK P +MR + RGG
Sbjct: 71 VLLLSSLVHVIDYSRDADDALYHLDRTRFYGMELEVEFARGDRKTPNQMRSKD--RGGRR 128
Query: 160 YGGPRSSYYG 169
R SYYG
Sbjct: 129 SSPYRDSYYG 138
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NIP++ EE R FE+FG V L +D TG+ RGF FV F++ AA A
Sbjct: 240 NFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAATA 299
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMR---QRHRFRGGSSYGG 162
+NGK F G+++ V A + +R EE+R + R S Y G
Sbjct: 300 VDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQG 345
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 83
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 84 MDGRMLDGRELRVQMA 99
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F+D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGALLDGRELRVQMA 90
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LVRN+ D R +++R F +G + DVY+PKD TG PRG AFV++ EA A
Sbjct: 45 SVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAVDG 104
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
G F GREI +A + RK +EMR
Sbjct: 105 GVGD-FLGREIRCEIATQQRKSRDEMR 130
>gi|73973899|ref|XP_532229.2| PREDICTED: serine/arginine-rich splicing factor 12 [Canis lupus
familiaris]
Length = 326
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 8 SLVFLVQEGSAMRRYSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVR 67
L V+EG +R P SP G GG G R G L +
Sbjct: 28 CLPLTVEEGFCTKRSLP---------------SPAPEGPTDGGIGASRDVSVPPGLLNLL 72
Query: 68 NIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ--------FVDPYEAAEA 119
RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A
Sbjct: 73 PAQPFFRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFSLVIFEDVRDAEDA 132
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+++N K GR+I + A RK P +M+ + R
Sbjct: 133 LYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 166
>gi|428179023|gb|EKX47896.1| hypothetical protein GUITHDRAFT_106442 [Guillardia theta CCMP2712]
Length = 563
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%)
Query: 71 LDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAG 130
LD R +EL F RFG + DVY+P+ YY G PRGFAFV+F + + A +G R G
Sbjct: 320 LDRRVDELEQVFNRFGRILDVYIPRSYYKGIPRGFAFVEFENYLDCKAALRSYDGTRLDG 379
Query: 131 REISVVLAAESRKRPEEMRQRHR 153
R +S+ A +RK EMR+R+R
Sbjct: 380 RVLSICYAQMNRKSSGEMRRRNR 402
>gi|443726785|gb|ELU13844.1| hypothetical protein CAPTEDRAFT_222122 [Capitella teleta]
Length = 99
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ------FVDPY 114
+ SL VRN+P R EELR+ F ++G + DVYLP D+YT PRGF+++Q F DP
Sbjct: 9 NTSLYVRNLPDTSRSEELRSLFGKYGPISDVYLPLDFYTRRPRGFSYIQYPSVSKFKDPR 68
Query: 115 EAAEAQHHMNGKRFAGREISVVLAAESRK 143
+A +A +H++ RF G ++ + A RK
Sbjct: 69 DAEDALYHLDRTRFFGCDLEIEFARGDRK 97
>gi|301774570|ref|XP_002922705.1| PREDICTED: splicing factor, arginine/serine-rich 13B-like
[Ailuropoda melanoleuca]
Length = 269
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDPYEAAEAQHHMNGK 126
RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K
Sbjct: 23 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 82
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHR 153
GR+I + A RK P +M+ + R
Sbjct: 83 WVCGRQIEIQFAQGDRKTPGQMKSKER 109
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 25 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 84
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 85 MDGRMLDGRELRVQMA 100
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++++T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G GRE+ V +A R+ P RQR
Sbjct: 75 MDGAELDGRELRVQVARYGRRDPPRSRQR 103
>gi|281344246|gb|EFB19830.1| hypothetical protein PANDA_011704 [Ailuropoda melanoleuca]
Length = 241
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF-VQFVDPYEAAEAQHHMNGKRFAGRE 132
RPE+LR F R+G + DVY+P D+YT PRGFA+ V F D +A +A +++N K GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 133 ISVVLAAESRKRPEEMRQRHR 153
I + A RK P +M+ + R
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F+D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGALLDGRELRVQMA 90
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 18 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 77
Query: 123 MNGKRFAGREISVVLA 138
M+G++ GRE+ V +A
Sbjct: 78 MDGRKLDGRELRVQMA 93
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 21 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 80
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 81 MDGRMLDGRELRVQMA 96
>gi|355561899|gb|EHH18531.1| hypothetical protein EGK_15157, partial [Macaca mulatta]
gi|355757706|gb|EHH61231.1| hypothetical protein EGM_19190, partial [Macaca fascicularis]
Length = 241
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF-VQFVDPYEAAEAQHHMNGKRFAGRE 132
RPE+LR F R+G + DVY+P D+YT PRGFA+ V F D +A +A +++N K GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 133 ISVVLAAESRKRPEEMRQRHR 153
I + A RK P +M+ + R
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|440911383|gb|ELR61059.1| Serine/arginine-rich splicing factor 12, partial [Bos grunniens
mutus]
Length = 241
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF-VQFVDPYEAAEAQHHMNGKRFAGRE 132
RPE+LR F R+G + DVY+P D+YT PRGFA+ V F D +A +A +++N K GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 133 ISVVLAAESRKRPEEMRQRHR 153
I + A RK P +M+ + R
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|431838154|gb|ELK00086.1| 35 kDa SR repressor protein, partial [Pteropus alecto]
Length = 241
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF-VQFVDPYEAAEAQHHMNGKRFAGRE 132
RPE+LR F R+G + DVY+P D+YT PRGFA+ V F D +A +A +++N K GR+
Sbjct: 1 RPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDVRDAEDALYNLNRKWVCGRQ 60
Query: 133 ISVVLAAESRKRPEEMRQRHR 153
I + A RK P +M+ + R
Sbjct: 61 IEIQFAQGDRKTPGQMKSKER 81
>gi|168042923|ref|XP_001773936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674780|gb|EDQ61284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
EPRGF F+Q++DP +AA+AQ+HM+ + AGREI+VV A E+RK+P EMR + R
Sbjct: 52 EPRGFGFIQYLDPADAADAQYHMDRQFIAGREITVVFAEENRKKPSEMRVKER 104
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 24 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 83
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 84 MDGRMLDGRELRVQMA 99
>gi|395849978|ref|XP_003797581.1| PREDICTED: serine/arginine-rich splicing factor 12 [Otolemur
garnettii]
Length = 366
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 65 LVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ--------FVDPYEA 116
+ R P RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A
Sbjct: 110 VTRPSPPRARPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFTLVIFEDVRDA 169
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +++N K GR+I + A RK P +M+ + R
Sbjct: 170 EDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 206
>gi|348563359|ref|XP_003467475.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Cavia
porcellus]
Length = 422
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 7/91 (7%)
Query: 70 PLDC-RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ------FVDPYEAAEAQHH 122
P C RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A ++
Sbjct: 172 PNQCNRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFFIFEDVRDAEDALYN 231
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N K GR+I + A RK P +M+ + R
Sbjct: 232 LNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 262
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A M
Sbjct: 48 CVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 107
Query: 124 NGKRFAGREISVVLA 138
+G+ GRE+ V +A
Sbjct: 108 DGRMLDGRELRVQMA 122
>gi|448878429|gb|AGE46177.1| arginine/serine-rich splicing factor SCL42 transcript II
[Physcomitrella patens subsp. patens]
Length = 106
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 32 RGYGGRGRSPPRRGYGGGG----------GGYGRRKEQNHGSLLVRNIPLDCRPEELRAP 81
RG G SPPRR +GGG G R SLLVRNIP DC E+LR P
Sbjct: 2 RGRSPLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLRIP 61
Query: 82 FERFGVVRDVYLPKDYYTG 100
FER+GVV+DVYLP+DYYTG
Sbjct: 62 FERYGVVKDVYLPRDYYTG 80
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 25 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEA 84
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 85 MDGRMLDGRELRVQMA 100
>gi|224033195|gb|ACN35673.1| unknown [Zea mays]
gi|413955617|gb|AFW88266.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
gi|413955618|gb|AFW88267.1| hypothetical protein ZEAMMB73_484317 [Zea mays]
Length = 143
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
EPRGF F+Q+ DP +A++A+++M+GK GREI+VV A E+RK+P +MR R + G
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYYMDGKMLLGREIAVVFAEENRKKPSDMRAREKISGRG-- 62
Query: 161 GGPRSSYYGRYRSRS 175
SY GR RSRS
Sbjct: 63 ----RSYDGRLRSRS 73
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAILDGRELRVQMA 90
>gi|395534618|ref|XP_003769337.1| PREDICTED: serine/arginine-rich splicing factor 12 [Sarcophilus
harrisii]
Length = 317
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 73 CRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ---------FVDPYEAAEAQHHM 123
RPE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++
Sbjct: 81 IRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFHSLVIFEDVRDAEDALYNL 140
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHR 153
N K GR+I + A RK P +M+ + R
Sbjct: 141 NRKWVCGRQIEIQFAQGDRKTPGQMKSKER 170
>gi|448878433|gb|AGE46179.1| arginine/serine-rich splicing factor SCL42 transcript IV
[Physcomitrella patens subsp. patens]
Length = 103
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 32 RGYGGRGRSPPRRGYGGGG----------GGYGRRKEQNHGSLLVRNIPLDCRPEELRAP 81
RG G SPPRR +GGG G R SLLVRNIP DC E+LR P
Sbjct: 2 RGRSPLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLRIP 61
Query: 82 FERFGVVRDVYLPKDYYTG 100
FER+GVV+DVYLP+DYYTG
Sbjct: 62 FERYGVVKDVYLPRDYYTG 80
>gi|291396606|ref|XP_002714518.1| PREDICTED: serine-arginine repressor protein-like [Oryctolagus
cuniculus]
Length = 248
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDPYEAAEAQHHMNGK 126
+PE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K
Sbjct: 2 KPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 61
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHR 153
GR+I + A RK P +M+ + R
Sbjct: 62 WVCGRQIEIQFAQGDRKTPGQMKSKER 88
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
+D +A +A M+G GRE+ V +A
Sbjct: 63 LDKRDAEDAMDAMDGALLDGRELRVQMA 90
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAILDGRELRVQMA 90
>gi|410959688|ref|XP_003986434.1| PREDICTED: serine/arginine-rich splicing factor 12 [Felis catus]
Length = 285
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDP 113
+ LL N+ +PE+LR F R+G + DVY+P D+YT PRGFA+VQ F D
Sbjct: 29 NADLLNHNL---YKPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDV 85
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+A +A +++N K GR+I + A RK P +M+ + R
Sbjct: 86 RDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 125
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NIP++ EE R FE+FG V L +D + + RGF FV F++ AA+A
Sbjct: 241 NFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAAKA 300
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGGPRSSYYGRYRSRSL 176
+NGK F G+++ V A + +R EE+R+ + R S Y G
Sbjct: 301 VDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDVDD 360
Query: 177 SRSRSPHHPQGSRSRYRSRSYTP 199
+ R P GS + + TP
Sbjct: 361 DKLRELFTPFGSITSAKVMRDTP 383
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 27 YSPPR---RGYGGRGRSPPRRGYGGGGGGYGRRKEQNHG--SLLVRNIPLDCRPEELRAP 81
+PPR G RG PP R YGR G SL V N+ P+ LR
Sbjct: 45 VAPPRAEDTGDSSRGSGPPLRAMS-----YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRV 99
Query: 82 FERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A
Sbjct: 100 FEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 156
>gi|413949176|gb|AFW81825.1| hypothetical protein ZEAMMB73_636417 [Zea mays]
Length = 143
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
EPRGF F+Q+ DP +A+ A++HM+GK GR+I+VV E+RK+P +MR R + G
Sbjct: 8 EPRGFGFIQYFDPEDASNAKYHMDGKMLLGRKIAVVFVEENRKKPSDMRAREKISGRG-- 65
Query: 161 GGPRSSYYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPG 220
SY GR RSRS SP G ++ RQH S ++ + G
Sbjct: 66 ----RSYDGRLRSRSPGLYDSPRVDHGPKAE--------ATRQHFSESTIQGYLNVYYVG 113
Query: 221 SPRGPPQERGAE 232
P+ E E
Sbjct: 114 IPKSLMSEVSCE 125
>gi|448878431|gb|AGE46178.1| arginine/serine-rich splicing factor SCL42 transcript III
[Physcomitrella patens subsp. patens]
Length = 80
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 32 RGYGGRGRSPPRRGYGGGG----------GGYGRRKEQNHGSLLVRNIPLDCRPEELRAP 81
RG G SPPRR +GGG G R SLLVRNIP DC E+LR P
Sbjct: 2 RGRSPLGHSPPRRSHGGGNRRRSPSPRGGRGGYGRDSTEPSSLLVRNIPRDCSAEDLRIP 61
Query: 82 FERFGVVRDVYLPKDYYTG 100
FER+GVV+DVYLP+DYYTG
Sbjct: 62 FERYGVVKDVYLPRDYYTG 80
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NIP++ EE R FE+FG V L +D +G+ RGF FV F++ AA A
Sbjct: 240 NFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAATA 299
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMR---QRHRFRGGSSYGG 162
+NGK F G+++ V A + +R EE+R + R S Y G
Sbjct: 300 VDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQG 345
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 53/89 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LVRNI D +++R F+ +G V DVY+PKD TG RG AFV++ EA +A
Sbjct: 2 SVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVEK 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
G GRE+ +A E RK P+EMR R
Sbjct: 62 ATGMDIMGREVRCEIANERRKNPDEMRGR 90
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
G +LV N+P C +++R FE+FG + +V+LP D +G+ +GFAFV +V P +A +A
Sbjct: 212 EGRILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAF 271
Query: 121 HHMNGKRFAGREISV 135
+ M+G+ GR I V
Sbjct: 272 NEMDGQVIKGRIIHV 286
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LLV+N+P + E+R F +G +R V +PK G+ +G+AF+++ EAA A+ M
Sbjct: 606 LLVKNLPFETNLNEVRELFRVYGTLRGVRVPKKI-DGQLKGYAFIEYATKQEAANAKAAM 664
Query: 124 NGKRFAGREISVVLAAES 141
GR + + A E+
Sbjct: 665 ANSHLYGRHLVIEFAKET 682
>gi|403261884|ref|XP_003923335.1| PREDICTED: serine/arginine-rich splicing factor 12 [Saimiri
boliviensis boliviensis]
Length = 271
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDPYEAAEAQHHMNGK 126
+PE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K
Sbjct: 25 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 84
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHR 153
GR+I + A RK P +M+ + R
Sbjct: 85 WVCGRQIEIQFAQGDRKTPGQMKSKER 111
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V N+ D + ++ F +FG V+DV+LP TG RGF FV F D EA +A+ M
Sbjct: 82 LFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEKGM 141
Query: 124 NGKRFAGREISVVLA 138
NG F GRE++V A
Sbjct: 142 NGTTFLGREVAVNFA 156
>gi|397504738|ref|XP_003822938.1| PREDICTED: serine/arginine-rich splicing factor 12 [Pan paniscus]
gi|426353976|ref|XP_004044448.1| PREDICTED: serine/arginine-rich splicing factor 12 [Gorilla gorilla
gorilla]
Length = 257
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDPYEAAEAQHHMNGK 126
+PE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K
Sbjct: 11 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 70
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHR 153
GR+I + A RK P +M+ + R
Sbjct: 71 WVCGRQIEIQFAQGDRKTPGQMKSKER 97
>gi|332218114|ref|XP_003258205.1| PREDICTED: serine/arginine-rich splicing factor 12 [Nomascus
leucogenys]
Length = 249
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-------FVDPYEAAEAQHHMNGK 126
+PE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K
Sbjct: 3 QPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFYFIFEDVRDAEDALYNLNRK 62
Query: 127 RFAGREISVVLAAESRKRPEEMRQRHR 153
GR+I + A RK P +M+ + R
Sbjct: 63 WVCGRQIEIQFAQGDRKTPGQMKSKER 89
>gi|313219579|emb|CBY30501.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VR I + RP+EL+A F +FG V+DV++P D+ T PRGFA+++F + E A
Sbjct: 5 SLFVRPIAQNVRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEF-ETMEDARNGLG 63
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
M+G GR+++V A RK P M+
Sbjct: 64 MDGMNLNGRKVNVAFAEGDRKTPGAMK 90
>gi|168042827|ref|XP_001773888.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674732|gb|EDQ61236.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 370
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 53/87 (60%), Gaps = 17/87 (19%)
Query: 25 PYYSPPRRGYGGRGRSPPRRGYGG-----------GGGGYGRRKEQNHGSLLVRNIPLDC 73
PYYS RRGY SPPR GYGG G G Y R E SLLVRNIP D
Sbjct: 6 PYYSD-RRGYS----SPPRSGYGGRRRSLSPLPGRGRGDYVREPEPP-TSLLVRNIPRDF 59
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTG 100
++LR PFER+G ++DVYLP+DYYTG
Sbjct: 60 TADDLRIPFERYGAIKDVYLPRDYYTG 86
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+PRGF FVQF+DP +AAEAQ++++ + AGREI++V A E+RKRP+EMR + R
Sbjct: 156 QPRGFGFVQFLDPQDAAEAQYYLDHEFIAGREITIVFAEENRKRPQEMRLKER 208
>gi|338710589|ref|XP_001915964.2| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Equus caballus]
Length = 284
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 75 PEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ---------FVDPYEAAEAQHHMNG 125
PE+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N
Sbjct: 37 PEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLSYRLVIFEDVRDAEDALYNLNR 96
Query: 126 KRFAGREISVVLAAESRKRPEEMRQRHR 153
K GR+I + A RK P +M+ + R
Sbjct: 97 KWVCGRQIEIQFAQGDRKTPGQMKSKER 124
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
N SL V N+ PE L+ FE++G V DVY+P+D Y+ E RGFAFV+F D +A +
Sbjct: 12 DNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVRFYDKRDAED 71
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+GK GR + V +A
Sbjct: 72 AMDCMDGKTMDGRVLRVAMA 91
>gi|313225812|emb|CBY07286.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VR I + RP+EL+A F +FG V+DV++P D+ T PRGFA+++F + E A
Sbjct: 5 SLFVRPIAQNVRPDELKAEFNKFGAVKDVHIPLDFRTRAPRGFAYIEF-ETMEDARNGLG 63
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
M+G GR+++V A RK P M+
Sbjct: 64 MDGMNLNGRKVNVAFAEGDRKTPGAMK 90
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGAVLDGRELRVQMA 90
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGALLDGRELRVQMA 90
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGALLDGRELRVQMA 90
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGAVLDGRELRVQMA 90
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRLLDGRELRVQMA 90
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRLLDGRELRVQMA 90
>gi|260826177|ref|XP_002608042.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
gi|229293392|gb|EEN64052.1| hypothetical protein BRAFLDRAFT_213668 [Branchiostoma floridae]
Length = 111
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ------FVDPYEA 116
SL VRN+P RP+ELR+ F ++G + DVY+P D++T PRGFA+VQ F D +A
Sbjct: 11 SLYVRNVPDGTRPDELRSLFGKYGPIVDVYIPLDHFTRHPRGFAYVQYPFLLTFEDVRDA 70
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRK 143
+A + ++ RF GRE+ + A RK
Sbjct: 71 EDAMYGLDRSRFYGRELEIQFAEGDRK 97
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K + SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F + +A
Sbjct: 10 KIEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVRFYEKRDA 69
Query: 117 AEAQHHMNGKRFAGREISVVLA 138
EA M+G+ GRE+ V +A
Sbjct: 70 EEALQEMDGRVLDGRELRVQMA 91
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRMLDGRELRVQMA 90
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGF+FV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRLLDGRELRVQMA 90
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGF+FV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGF+FV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|307106096|gb|EFN54343.1| hypothetical protein CHLNCDRAFT_135593 [Chlorella variabilis]
Length = 224
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLVRN+ D ++LR E++G V+DVY+PKDYYTG PRG AFV+F D +A +A++
Sbjct: 12 SLLVRNLAPDVSGDDLRYAAEKYGRVKDVYVPKDYYTGRPRGIAFVEFDDRRDAEDAKYG 71
Query: 123 MNGKRFAGREISVVLA 138
M+ EI+V A
Sbjct: 72 MDRSMLGSGEIAVQFA 87
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGALLDGRELRVQMA 90
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+E++ FE++G V D+Y+P+D YT E RGFAFV+F + +A +A
Sbjct: 3 SLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMER 62
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
++G GRE+ V LA RP E + RH
Sbjct: 63 LDGYVIDGREMRVQLARYG--RPNENKGRH 90
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 16 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDA 75
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 76 MDGRMLDGRELRVQMA 91
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ G + + N+P +C +++R F+RFG + +++LP D T + +GF FV FV P +A
Sbjct: 181 KDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDA 240
Query: 117 AEAQHHMNGKRFAGREISVVLAA----------ESRKRPEEMRQRHRFRGGSSYGGPRSS 166
+A + M+ K GR + V A ES+ E+ + + + G+ + S+
Sbjct: 241 VKACNEMDNKFIKGRIVHVTYAKADPYSNQQVGESKNYKEKKQNELKAKAGNQFNW--ST 298
Query: 167 YYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPG 220
Y R + + + + + S E+Y I+ ++ +E G
Sbjct: 299 LYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENG 352
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
LLV+N+P + +E+R F +G +R V LPK G+ +GFAFV++ EAA A
Sbjct: 616 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKK-VDGQNKGFAFVEYATKQEAANAMA 674
Query: 122 HMNGKRFAGREISV 135
+ F GR + +
Sbjct: 675 ALKNSHFYGRHLII 688
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P CR +ELR FE FG + ++++P D T +P+GFAF+ FV P A++A
Sbjct: 539 GRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPEHASQAFQ 598
Query: 122 HMNGKRFAGREISVV 136
+++ F GR + V+
Sbjct: 599 NLDNTIFQGRLLHVL 613
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 54 GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDP 113
G++ + L+VRNI + P+E++ F G + V LP+ Y G RGFAF++F
Sbjct: 997 GKKMKAKSNKLVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTK 1056
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
EA +A ++G GR +++ AE + E +RQ+
Sbjct: 1057 QEARDAFSALSGTHLYGRRLAMEF-AEDDESLETLRQK 1093
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ G + + N+P +C +++R F+RFG + +++LP D T + +GF FV FV P +A
Sbjct: 182 KDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDA 241
Query: 117 AEAQHHMNGKRFAGREISVVLAA----------ESRKRPEEMRQRHRFRGGSSYGGPRSS 166
+A + M+ K GR + V A ES+ E+ + + + G+ + S+
Sbjct: 242 VKACNEMDNKFIKGRIVHVTYAKADPYSNQQVGESKNYKEKKQNELKAKAGNQFNW--ST 299
Query: 167 YYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPG 220
Y R + + + + + S E+Y I+ ++ +E G
Sbjct: 300 LYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENG 353
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
LLV+N+P + +E+R F +G +R V LPK G+ +GFAFV++ EAA A
Sbjct: 604 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKK-VDGQNKGFAFVEYATKQEAANAMA 662
Query: 122 HMNGKRFAGREISV 135
+ F GR + +
Sbjct: 663 ALKNSHFYGRHLII 676
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ G + + N+P +C +++R F+RFG + +++LP D T + +GF FV FV P +A
Sbjct: 181 KDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDA 240
Query: 117 AEAQHHMNGKRFAGREISVVLAA----------ESRKRPEEMRQRHRFRGGSSYGGPRSS 166
+A + M+ K GR + V A ES+ E+ + + + G+ + S+
Sbjct: 241 VKACNEMDNKFIKGRIVHVTYAKADPYSSQQTGESKNYKEKKQNELKAKAGNQFNW--ST 298
Query: 167 YYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPG 220
Y R + + + + + S E+Y I+ ++ +E G
Sbjct: 299 LYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENG 352
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
LLV+N+P + +E+R F +G +R V LPK G+ +GFAFV++ EAA A
Sbjct: 616 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKK-VDGQNKGFAFVEYATKQEAANAMA 674
Query: 122 HMNGKRFAGREISV 135
+ F GR + +
Sbjct: 675 ALKNSHFYGRHLII 688
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ PE LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 49 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 108
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 109 MDGAVLDGRELRVQMA 124
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ G + + N+P +C +++R F+RFG + +++LP D T + +GF FV FV P +A
Sbjct: 182 KDWEEGRIYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDA 241
Query: 117 AEAQHHMNGKRFAGREISVVLAA----------ESRKRPEEMRQRHRFRGGSSYGGPRSS 166
+A + M+ K GR + V A ES+ E+ + + + G+ + S+
Sbjct: 242 VKACNEMDNKFIKGRIVHVTYAKADPYSNQQVGESKNYKEKKQNELKAKAGNQFNW--ST 299
Query: 167 YYGRYRSRSLSRSRSPHHPQGSRSRYRSRSYTPVPRQHEDYSISPRRRHIEHPG 220
Y R + + + + + S E+Y I+ ++ +E G
Sbjct: 300 LYMRQDTAVSAVAEELGMKKEEILDVNAESMAVRVALAENYVINQTKKWLEENG 353
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
LLV+N+P + +E+R F +G +R V LPK G+ +GFAFV++ EAA A
Sbjct: 604 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLPKK-VDGQNKGFAFVEYATKQEAANAMA 662
Query: 122 HMNGKRFAGREISV 135
+ F GR + +
Sbjct: 663 ALKNSHFYGRHLII 676
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR F+++G V DVY+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALDS 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAIMDGRELRVQMA 90
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A EA
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALDS 74
Query: 123 MNGKRFAGREISVVLA 138
++G+ GRE+ V +A
Sbjct: 75 LDGRMLDGRELRVQMA 90
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 23 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAEDALDA 82
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 83 MDGRMLDGRELRVQMA 98
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ PE LR FE++G V DVY+P+D Y+ E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGALLDGRELRVQMA 90
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 52 GYGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
YGR Q G SL V N+ PE+L+ FE++G V DVY+P+ YT E RGFAFV+
Sbjct: 2 NYGRAPPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVR 61
Query: 110 FVDPYEAAEAQHHMNGKRFAGREISVVLA 138
F D + +A ++G GRE+ V +A
Sbjct: 62 FYDKRDCEDAMDSLDGYILDGRELRVQMA 90
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A EA
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALDS 74
Query: 123 MNGKRFAGREISVVLA 138
++G+ GRE+ V +A
Sbjct: 75 LDGRMLDGRELRVQMA 90
>gi|426235141|ref|XP_004011549.1| PREDICTED: serine/arginine-rich splicing factor 12 [Ovis aries]
Length = 301
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ-----FVDPYEAAEAQHHMNGKRFAG 130
E+LR F R+G + DVY+P D+YT PRGFA+VQ F D +A +A +++N K G
Sbjct: 59 EDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFIFEDVRDAEDALYNLNRKWVCG 118
Query: 131 REISVVLAAESRKRPEEMRQRHR 153
R+I + A RK P +M+ + R
Sbjct: 119 RQIEIQFAQGDRKTPGQMKSKER 141
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGAVLDGRELRVQMA 90
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+L+ FER+G V DVY+P+ YT E RGFAFV+F D + +A
Sbjct: 15 SLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
++G GRE+ V +A
Sbjct: 75 LDGYMMDGRELRVQMA 90
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F D +A EA
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRRDAEEALDS 74
Query: 123 MNGKRFAGREISVVLA 138
++G+ GRE+ V +A
Sbjct: 75 LDGRMLDGRELRVQMA 90
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D YT E RGFAFV+F + +A EA
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRMLDGRELRVQMA 90
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 16 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQDALDA 75
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 76 MDGRMLDGRELRVQMA 91
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRMLDGRELRVQMA 90
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 50/80 (62%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ E+LR FE++G V DVY+PKD ++ E RGFAFV+F D + +
Sbjct: 10 EGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDRRDGED 69
Query: 119 AQHHMNGKRFAGREISVVLA 138
A H M+G+ GRE+ V LA
Sbjct: 70 AMHAMDGRMMDGRELRVQLA 89
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+R+G V D+Y+P+D+ TG+PRGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 77 LDGMRFDGRALMVQFA 92
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+L+ FER+G V DVY+P+ YT E RGFAFV+F D + +A
Sbjct: 15 SLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
++G GRE+ V +A
Sbjct: 75 LDGYMMDGRELRVQMA 90
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+R+G V D+Y+P+D+ TG+PRGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 77 LDGMRFDGRALMVQFA 92
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 72 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 131
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 132 MDGAVLDGRELRVQMA 147
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 16 SLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAQDALDA 75
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 76 MDGRMLDGRELRVQMA 91
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE LR FE++G V DVY+P+D Y+ E RGFAFV+F D +A +A
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 61 MDGALLDGRELRVQMA 76
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 52 GYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
G GR N S+ V NI R E+LR F+ FG + D+Y+P+ T +PRG+AFV+F+
Sbjct: 3 GGGRPDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFI 62
Query: 112 DPYEAAEAQHHMNGKRFAGREISVVLA 138
+ +A +A HM+G++ G+E+ LA
Sbjct: 63 NERDAEDAIKHMDGQQLNGKEVYCQLA 89
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V N+ PE+L+ FER+G V DVY+P+ YT E RGFAFV+F D + +A +
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 124 NGKRFAGREISVVLA 138
+G GRE+ V +A
Sbjct: 61 DGYMMDGRELRVQMA 75
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRMVDGRELRVQMA 90
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|448878425|gb|AGE46175.1| arginine/serine-rich splicing factor SCL33 transcript III
[Physcomitrella patens subsp. patens]
Length = 95
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 56/94 (59%), Gaps = 23/94 (24%)
Query: 25 PYYSPPRRGYGGRGRSPPRRGYGG------------------GGGGYGRRKEQNHGSLLV 66
PYYSP RRGY SPPRRGY GG G R+ + SLLV
Sbjct: 6 PYYSP-RRGYD----SPPRRGYDSPPRRSYGGRRRSPSPPPRGGRGGYGREPEPPTSLLV 60
Query: 67 RNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG 100
RNIP DC ++LR PFER+GVV+DVYLP+DYYTG
Sbjct: 61 RNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTG 94
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|156407025|ref|XP_001641345.1| predicted protein [Nematostella vectensis]
gi|156228483|gb|EDO49282.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA--FVQFVDPYEAAE 118
+ S+ VRN+ D RP++LR F ++G + DVY+P DYYT EPRGF ++ F D +A +
Sbjct: 9 NSSIYVRNLHPDTRPDDLRRMFGKYGRITDVYIPLDYYTREPRGFCYIYITFEDIRDAED 68
Query: 119 AQHHMNGKRFAGREISVVLAAESRK 143
A ++++ GRE+ V A RK
Sbjct: 69 ALYYLDRAMLLGRELEVQFAEGDRK 93
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 3 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 62
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 63 MDGAVLDGRELRVQMA 78
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|414589482|tpg|DAA40053.1| TPA: hypothetical protein ZEAMMB73_656721 [Zea mays]
Length = 110
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
EPRGF F+Q+ DP +A++A++HM+GK GREI+VV A E+RK+P ++R R +
Sbjct: 5 EPRGFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADIRAREK 57
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PR FAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
M+G GRE+ V +A R+ + R G S+GG R R S+SR P
Sbjct: 75 MDGAVLDGRELRVQMARYGRR--DLPRSSQEEPSGRSWGGRYGRRSRSPRGRHRSQSRGP 132
Query: 183 HHPQG-SRSRYRSRSYTPVPRQHEDYSISPRRR 214
+ + SRS Y Y+ P + YS SP RR
Sbjct: 133 SYSKSRSRSHYGGSGYSRSPYRRSRYSRSPYRR 165
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P ++ T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQVA 90
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++PKD TGE RGFAFV++ EA++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|313235509|emb|CBY10964.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ S+ +R I RP+E++A F+ FG ++++ +P D+ T EPRGFA+V F + A EA+
Sbjct: 10 NSSICIRPIDACIRPDEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEAR 69
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEM-RQRHRFRGGSSYGGPRSSY 167
+NG+ R++ V + ++K P EM RQ+ + R +
Sbjct: 70 DIINGRILFDRKVQVYYSNGTKKLPSEMVRQKECVKIQKQLKSTRKTV 117
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++PKD TGE RGFAFV++ EA++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGAVLDGRELRVQMA 90
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VR I RP+E++ F +G VRDV++P D+ T +PRGFA+++F +A AQ
Sbjct: 57 SLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQKK 116
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
+N R + + V A RK P +M+
Sbjct: 117 LNRTRLGDKMLHVDFAQGDRKTPGQMK 143
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++PKD TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G GRE+ V +A
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGRELRVQMA 90
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G GRE+ V +A R+ RQR
Sbjct: 75 MDGAELDGRELRVQVARYGRRDLPRSRQR 103
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++PKD TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+G GRE+ V +A R+ RQR
Sbjct: 75 MDGAELDGRELRVQVARYGRRDLPRSRQR 103
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREISVVLA 138
A M+G GRE+ V +A
Sbjct: 71 AMDAMDGAVLDGRELRVQMA 90
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LV N+ ++L F+R+G V D+Y+P+D+ TG+PRGFAFV++ EA +A
Sbjct: 19 SILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAIDG 78
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 79 LDGXRFDGRALMVQFA 94
>gi|317152646|ref|YP_004120694.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942897|gb|ADU61948.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+P +C EELRA FE +G VR V L D+ T PRGF FV+ D A EA +
Sbjct: 4 NLYVGNLPWNCTEEELRAAFEAYGEVRSVKLVNDHETDRPRGFGFVEMGDQ-GALEAVEN 62
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
+NG GR I V E+R RPE
Sbjct: 63 LNGSSLGGRSIKV---NEARPRPE 83
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+LV N+ ++L F+R+G V D+Y+P+D+ TG+PRGFAFV++ EA +A
Sbjct: 19 SILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEARDAIDG 78
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 79 LDGMRFDGRALMVQFA 94
>gi|413935498|gb|AFW70049.1| hypothetical protein ZEAMMB73_947633 [Zea mays]
Length = 143
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRG-GSS 159
EPRGF F+Q+ D +A++A++HM+GK GREI VV A E+ K+P +MR R + G G S
Sbjct: 5 EPRGFGFIQYFDTEDASDAKYHMDGKMLLGREIVVVFAEENWKKPFDMRAREKISGRGRS 64
Query: 160 YGG 162
Y G
Sbjct: 65 YDG 67
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL VR I RP+E++ F +G VRDV++P D+ T +PRGFA+++F +A AQ
Sbjct: 57 SLYVRPIDGSTRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESIEDAEYAQKK 116
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
+N R + + V A RK P +M+ +
Sbjct: 117 LNRTRLGDKMLHVDFAQGDRKTPGQMKTQ 145
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D YT E RGFAFV+F + +A EA
Sbjct: 15 SLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDS 74
Query: 123 MNGKRFAGREISVVLA 138
++G+ GRE+ V +A
Sbjct: 75 LDGRMLDGRELRVQMA 90
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P++LR FER G V D+Y+P+D ++ E RGFAFV+F D +A +A
Sbjct: 62 SLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAEDALDA 121
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 122 MDGRILDGRELRVQMA 137
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
SL V NI R +L F +FG V DVY+P+D ++ RGFAFV +
Sbjct: 3 SLKVGNISYRTRTLDLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+R+G V D+Y+P+D+ TG+PRGFAFV++ EA +A
Sbjct: 19 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 78
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 79 LDGMRFDGRALMVQFA 94
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+++G V D+++PKD TGE RGFAFV++ EA++A
Sbjct: 17 SLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAEDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAELDGRELRVQVA 90
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++PKD TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|342878293|gb|EGU79648.1| hypothetical protein FOXB_09931 [Fusarium oxysporum Fo5176]
Length = 759
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+P E+LR FERFG + +V+LP +G +GFA V F DP A EA M
Sbjct: 329 LFVRNLPYSATQEDLRETFERFGTIEEVHLPVS-NSGTSKGFALVLFTDPSGAVEAFQAM 387
Query: 124 NGKRFAGREISVVLAAESR 142
+G F GR + ++ A+ R
Sbjct: 388 DGATFQGRILHIIPASAKR 406
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ E+LR FER G V D+Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 3 SLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALDS 62
Query: 123 MNGKRFAGREISVVLA 138
++G+ GRE+ V +A
Sbjct: 63 LDGRMLDGRELRVQMA 78
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+P D + E+L A FERFG + +V++ D TG +GFAF+Q+ DP + +A
Sbjct: 303 LFVRNLPYDAQKEDLEAEFERFGNLEEVHIALDKKTGTAKGFAFIQYSDPDSSEQAFVDR 362
Query: 124 NGKRFAGREISVV 136
+G+ F GR + ++
Sbjct: 363 DGQTFQGRLLHIL 375
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
+R ++++N+P + +++RA F +G +R V +PK RGFAF +F
Sbjct: 688 ADVAKRSAARSTKIIIKNLPFETTKKDVRALFGAYGQLRSVRVPKKIDRA-ARGFAFAEF 746
Query: 111 VDPYEAAEAQHHMNGKRFAGREISV 135
EA A + GR + +
Sbjct: 747 TTAKEAQSAMDALRDTHLLGRRLVL 771
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ PE+LR FE++G V D+Y+P+D ++ E RGFAFV++
Sbjct: 3 YGRIAPDIEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRY 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D +A +A M+G + GR++ V +A
Sbjct: 63 PDKRDAEDAMDSMDGNLYDGRKLRVQMA 90
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++ V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 209 TLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFVRFHDRSDAQDAEAA 268
Query: 123 MNGKRFAGREISVVLAAESRK-RPEEMRQRHRFRGGSSYGG 162
M+G GRE+ V +A R+ P ++ R GSS+GG
Sbjct: 269 MDGAVLDGRELRVRMARYGRRDLPRSSQEEPR---GSSWGG 306
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FE++G V D+Y+P+D ++ E RGFAFV++ D +A +A
Sbjct: 15 SLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAEDAMDS 74
Query: 123 MNGKRFAGREISVVLA 138
M+G + GR++ V +A
Sbjct: 75 MDGNLYDGRKLRVQMA 90
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
++G+ GR I V A RK +E QR R + G R S S SRSP
Sbjct: 77 LDGREVDGRHIVVQFAKYGRK--DEPIQRGRI---TDTGMKRVSR---------SASRSP 122
Query: 183 HHPQGSRSRYR 193
P+ SR R
Sbjct: 123 KRPRSSRDDDR 133
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 5 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 64
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 65 MDGAELDGRELRVQVA 80
>gi|414867727|tpg|DAA46284.1| TPA: hypothetical protein ZEAMMB73_663605 [Zea mays]
Length = 494
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 38/45 (84%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
RP++LR PF +FG V+D+YLPKDYYT EPRGF F+Q+ DP +A++
Sbjct: 357 RPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASD 401
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI LD ++ RA FE+FG V L +D TG+ RGF FV F +A++A
Sbjct: 240 NFTNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDASKA 299
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+N K F G+ + V A + +R EE+R+ SY R +Y+ +L
Sbjct: 300 VEELNEKEFHGQNLYVGRAQKKHEREEELRR--------SYEAARQEKASKYQGVNLYIK 351
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R + P+
Sbjct: 352 NLDDEVDDDKLRQLFSEFGPI 372
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 75 MDGRLLDGRELRVQMA 90
>gi|428177144|gb|EKX46025.1| hypothetical protein GUITHDRAFT_70912, partial [Guillardia theta
CCMP2712]
Length = 84
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 66 VRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
VRNI ++LR F R+G V+DVY+P DYYT P+ FAFV+F++ EA +A+ M+
Sbjct: 1 VRNIGDRTDGQDLRELFGRYGTVKDVYIPIDYYTKRPKPFAFVEFINYEEARDAKEDMDR 60
Query: 126 KRFAGREISVVLAAE 140
+ F GR I VV A +
Sbjct: 61 REFQGRVIDVVFAQQ 75
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G RE+ V +A
Sbjct: 75 MDGAVLDARELRVQMA 90
>gi|59802584|gb|AAX07527.1| unknown [Prosthecobacter dejongeii]
Length = 111
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 66 VRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V N+P ELRA F +G V D++LP D+ TG PRGFAFV EA +NG
Sbjct: 9 VGNLPFTAMESELRALFNDYGTVTDMHLPMDHATGRPRGFAFVTMDSAMAMNEAITALNG 68
Query: 126 KRFAGREISVVLAAESRKRPEEMR 149
K F GR +++ + RP+E R
Sbjct: 69 KDFGGRSLTI-----NEARPKEDR 87
>gi|351709838|gb|EHB12757.1| FUS-interacting serine-arginine-rich protein 1, partial
[Heterocephalus glaber]
Length = 262
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 69 IPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
+ D R E+ R F G DVY+P D+Y PRGFA+VQF D +A + H+++ K
Sbjct: 17 VADDTRSEDSRREFGSCGPTVDVYVPLDFYIRRPRGFAYVQFEDVCDAEDVLHNLDRKWI 76
Query: 129 AGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
G + + A RK P +M+ + R SS
Sbjct: 77 CGHQTEIQFAQGDRKTPNQMKPKERRNAYSS 107
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FE++G V D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRVVDGREIMVQFA 92
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAELDGRELRVQVA 90
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAELDGRELRVQVA 90
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAELDGRELRVQVA 90
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FE++G V D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRVVDGREIMVQFA 92
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAELDGRELRVQVA 90
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++P+D TGE RGFAFV++ EA++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|297282509|ref|XP_001113147.2| PREDICTED: splicing factor, arginine/serine-rich 13A-like [Macaca
mulatta]
Length = 98
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I +
Sbjct: 10 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 69
Query: 136 VLAAESRK 143
A RK
Sbjct: 70 QFAQGDRK 77
>gi|345320496|ref|XP_001519931.2| PREDICTED: hypothetical protein LOC100090925, partial
[Ornithorhynchus anatinus]
Length = 369
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%)
Query: 74 RPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREI 133
R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I
Sbjct: 101 RSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQI 160
Query: 134 SVVLAAESRK 143
+ A RK
Sbjct: 161 EIQFAQGDRK 170
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + NI P++LR FE++G + D+++P+D YT + +GF FV+F +A A
Sbjct: 15 SLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDR 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GREI V +A
Sbjct: 75 MDGRWVDGREIRVAMA 90
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ E+LR FE++G V DVY+P+D ++ E RGFAFV+F D +A +
Sbjct: 11 EGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFAFVRFFDKRDADD 70
Query: 119 AQHHMNGKRFAGREISV 135
A M+G GRE+ V
Sbjct: 71 AMESMDGAVMDGRELRV 87
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 161 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 220
Query: 123 MNGKRFAGREISV 135
M+G GRE+ V
Sbjct: 221 MDGAELDGRELRV 233
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FE++G V DVY+P+D +T E RGFAFV++ D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDKRDAEDALDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGATLDGRELRVQMA 90
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V DV++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRVVDGREIMVQFA 92
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C ++L A F +FG + +V++P D T +P GFAFV F+ P A A
Sbjct: 607 GRLFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTGFAFVLFLMPEHAVTAFR 666
Query: 122 HMNGKRFAGREISVV 136
++G F GR + ++
Sbjct: 667 ALDGSTFQGRLLHLL 681
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L+VRN+P + +EL F FG ++ V LP+ G+ RGFAF++F+ EA +A +
Sbjct: 1065 LIVRNVPFEATRKELFDVFSPFGQLKSVRLPQKP-GGQHRGFAFIEFLTKEEAKKAFESL 1123
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRH--RFRGGSS 159
F GR + + AAE E+MR++ RF+ ++
Sbjct: 1124 KATHFYGRHLVLEWAAED-ASVEQMREKTAARFKSMTN 1160
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI D EE R FE+FG + L +D +G+ RGF FV F AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K F G+++ V A + +R EE+R+++ R S Y G
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 339
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI D EE R FE+FG + L +D +G+ RGF FV F AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K F G+++ V A + +R EE+R+++ R S Y G
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 339
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+R+G V D+Y+P+D+ TG+PRGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFAFVRYNYEDEAQDAIDG 76
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 77 LDGMRFDGRALMVQFA 92
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI D EE R FE+FG + L +D +G+ RGF FV F AA A
Sbjct: 234 NFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K F G+++ V A + +R EE+R+++ R S Y G
Sbjct: 294 VEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 339
>gi|452936|gb|AAB28794.1| 60 kda non-pathogenic specific antigen [Entamoeba histolytica, SAW
1734R, Peptide Partial, 273 aa]
Length = 273
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ G + + N+P +C +E R F+RFG + +++LP D T + +GF V FV P +A
Sbjct: 176 KDWEEGRIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDA 235
Query: 117 AEAQHHMNGKRFAGREISVVLAAES 141
+A + M+ K GR + V A S
Sbjct: 236 VKACNEMDNKFIKGRIVHVTYAKAS 260
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAGREI 133
A M+G GRE+
Sbjct: 71 AMDAMDGAVLDGREL 85
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P ++LR FE++G + +++LP D G +GF VQ+ DP AAEA H
Sbjct: 311 GRLFVRNLPYSATEDDLRKHFEQYGTLEEIHLPVDA-KGASKGFVLVQYTDPNAAAEAYH 369
Query: 122 HMNGKRFAGREISVVLAAESR 142
+++G+ F GR + ++ AA R
Sbjct: 370 NVDGEPFQGRLLHILPAAAKR 390
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 43 RRGYGGGGGGYGRRKEQ-------NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPK 95
+ + G +RKE L+V+N+P + ++R F +G +R V +PK
Sbjct: 689 KASHKGADAAEEKRKEDRAKKLAGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPK 748
Query: 96 DYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFR 155
+ RGFAF F+ EA A + GR + + A+E EE ++ + +
Sbjct: 749 -KFDHSTRGFAFADFITAREAENALEALKDTHLLGRRLVIDFASEETVDAEEEIEKMQKK 807
Query: 156 GGSSYG 161
GS
Sbjct: 808 VGSQVN 813
>gi|448878244|gb|AGE46085.1| arginine/serine-rich splicing factor SCL25B transcript II [Zea
mays]
gi|448878252|gb|AGE46089.1| arginine/serine-rich splicing factor SCL25B transcript VI [Zea
mays]
gi|448878258|gb|AGE46092.1| arginine/serine-rich splicing factor SCL25B transcript IX [Zea
mays]
Length = 84
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 27 YSP-PRRGYGGRGRSP-PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFER 84
YSP P RGY R RSP P YGG G SLLVRN+ DCRPE+LR PF +
Sbjct: 7 YSPSPPRGYRRRARSPSPHDHYGGRG-------RDLPTSLLVRNLRRDCRPEDLRRPFGQ 59
Query: 85 FGVVRDVYLPKDYYTG 100
FG V+D+YLP+DYYTG
Sbjct: 60 FGRVKDIYLPRDYYTG 75
>gi|735966|emb|CAA56649.1| surface antigen [Entamoeba histolytica]
Length = 294
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ G + + N+P +C +E R F+RFG + +++LP D T + +GF V FV P +A
Sbjct: 181 KDWEEGRIYITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLFVVPQDA 240
Query: 117 AEAQHHMNGKRFAGREISVVLA 138
+A + M+ K GR + V A
Sbjct: 241 VKACNEMDNKFIKGRIVHVTYA 262
>gi|440638008|gb|ELR07927.1| hypothetical protein GMDG_02786 [Geomyces destructans 20631-21]
Length = 805
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NIP D ++ R FE+FG V L +D G+ RGF FV F++ A+ A
Sbjct: 241 NFTNIYVKNIPADATDDQFRELFEKFGDVTSASLARDE-AGKNRGFGFVNFINHEHASAA 299
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+NGK F G+++ V A + +R EE+R+ + R S Y G
Sbjct: 300 VDELNGKDFMGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQG 345
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P ++LR FE++G + +++LP D G +GF VQ+ DP AAEA H
Sbjct: 315 GRLFVRNLPYSATEDDLRKHFEQYGALEEIHLPVDA-KGASKGFVLVQYTDPNAAAEAYH 373
Query: 122 HMNGKRFAGREISVVLAAESR 142
+++G+ F GR + ++ AA R
Sbjct: 374 NVDGEPFQGRLLHILPAAAKR 394
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 43 RRGYGGGGGGYGRRKEQ-------NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPK 95
+ + G +RKE L+V+N+P + ++R F +G +R V +PK
Sbjct: 693 KASHKGADAAEEKRKEDRAKKLAGKRTKLIVKNLPFEASKSDIRKLFGTYGQLRSVRMPK 752
Query: 96 DYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFR 155
+ RGFAF F+ EA A + GR + + A+E EE ++ + +
Sbjct: 753 -KFDHSTRGFAFADFITAREAENALEALKDTHLLGRRLVIDFASEETVDAEEEIEKMQKK 811
Query: 156 GGS 158
GS
Sbjct: 812 VGS 814
>gi|313216842|emb|CBY38074.1| unnamed protein product [Oikopleura dioica]
Length = 360
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+ S+ + I RP+E++A F+ FG ++++ +P D+ T EPRGFA+V F + A EA+
Sbjct: 10 NSSICIHPIDACIRPDEIKAEFKEFGEIKEIRIPVDFETREPRGFAYVDFEEVESAIEAR 69
Query: 121 HHMNGKRFAGREISVVLAAESRKRPEEM-RQRHRFRGGSSYGGPRSS 166
+NG+ R++ V + ++K P EM RQ+ + R +
Sbjct: 70 DIINGRILFDRKVQVYYSNGTKKLPSEMVRQKECVKIQKQLKSTRKA 116
>gi|414877624|tpg|DAA54755.1| TPA: hypothetical protein ZEAMMB73_495943 [Zea mays]
Length = 474
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 62/115 (53%), Gaps = 15/115 (13%)
Query: 92 YLPKDYYTGE--PRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
YL KD G F F+Q+ DP +A++A++HM+GK GREI+VV A E+RK+P +MR
Sbjct: 201 YLHKDNEKGNWNLEDFGFIQYFDPEDASDAKYHMDGKMLLGREIAVVFAEENRKKPADMR 260
Query: 150 QR---HRFRGGSSY-------GGPRSSYYGRYRSRSLSRSRSP---HHPQGSRSR 191
R H R Y G SY GR RSRS + SP H P+ +R
Sbjct: 261 AREKKHFKRQKLIYSCNFYLCSGRGHSYDGRLRSRSPGLNDSPGVDHGPKAEATR 315
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++ V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P + +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G RE+ V +A
Sbjct: 75 MDGAVLDERELRVRMA 90
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L + + L + L+A F ++G + +V+L KD T + RGFAF+ F P +A A M
Sbjct: 10 LFIGGLSLKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESPADANAAARDM 69
Query: 124 NGKRFAGREISVVLAAE 140
NGK G+ I V LA +
Sbjct: 70 NGKYLDGKAIKVALAIK 86
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ V N+ D E+L+A FE FG V D +LP D Y G RGF F+Q D ++ +A M
Sbjct: 198 IYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVD-YDGNARGFGFIQMSDE-DSLKAIEGM 255
Query: 124 NGKRFAGREISVVLAAESRKRPEEM--RQRHRFRGGSSYG---GPRSSYYGRYRS 173
NG F GR ++V + +RP ++ + G S+G G +G Y S
Sbjct: 256 NGVEFDGRTLNVNKSLPKGQRPAAAAPKETKLYVGNLSWGTEEGALRELFGEYGS 310
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V N+ LR F +G V D Y+P D TG+ RGFAFV + P +A A
Sbjct: 287 LYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVT-MGPDDALRAADET 345
Query: 124 NGKRFAGREISV 135
+G GR + V
Sbjct: 346 DGYELDGRILRV 357
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRVVDGREITVQFA 92
>gi|452823111|gb|EME30124.1| RNA-binding protein [Galdieria sulphuraria]
Length = 713
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+ EEL FE++G++ DV++ D T + +GFAF+ FV P AA+A
Sbjct: 295 GRLFVRNLAYSVTDEELTKLFEKYGLLSDVHVCIDSETQKAKGFAFITFVLPENAAQAMA 354
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRH---------RFRGGSSYGGPRSSYYGRYR 172
++G F GR + +L A + R E+ R+ + + + G R ++ Y
Sbjct: 355 ELDGHIFQGRLLH-ILPAMAPIRNEQERKTSNLYKDEKLAKMKQSAKLGTDRQAWSSLYM 413
Query: 173 SRSLSRSRSPHHPQGSRSRY 192
S + Q S+S+
Sbjct: 414 STDAVADSIAQNFQVSKSQV 433
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G LL+ + + E L A F ++G + +V L KD T + RGFAF+ F P +A +A
Sbjct: 7 GKLLIGGLSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAK 66
Query: 122 HMNGKRFAGREISVVLA 138
MNGK G+ I V A
Sbjct: 67 EMNGKFLDGKTIKVEQA 83
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46 Splicing
Factor
Length = 103
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAELDGRELRVQVA 90
>gi|292491403|ref|YP_003526842.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291579998|gb|ADE14455.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 91
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+P C +E+R FE FG V V L D TG+PRGF FV+ +D AAEA
Sbjct: 3 SIYVGNLPFQCSQDEIRELFEPFGAVNSVKLISDRETGKPRGFGFVE-MDHDAAAEAIEQ 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
+NG F GR + + A E RP RQ RF
Sbjct: 62 LNGTDFKGRPLRINEARERTSRPP--RQSRRF 91
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ VR +P D +L FE +G V D+Y+PK Y+ G PRGFA+V+F +A A
Sbjct: 5 SIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEK 64
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
+ G+ ++V A RK +MR+
Sbjct: 65 IPSIVILGQTLNVEWATGERKTSNDMRR 92
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D L + F ++G V D + KD TG RGF FV F +P +A EA
Sbjct: 5 DEGKLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEA 64
Query: 120 QHHMNGKRFAGREISVVLA 138
H MNG+ GR+I V LA
Sbjct: 65 LHAMNGESLDGRQIRVDLA 83
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ + EE R FE++G + L +D TG+ RGF FV FV+ AA A
Sbjct: 233 NFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAA 292
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K + G+++ V A + +R EE+R++H R S Y G
Sbjct: 293 VEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 338
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
D P D G+ +GF FV F +P EA++A MN + G+ + V LA
Sbjct: 420 DTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALA 468
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N +L V N+P +ELR F +FG + DVY+P+ + E RGFAFV+F++ +A +A
Sbjct: 5 NMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRDAEDA 64
Query: 120 QHHMNGKRFAGREISVVLAAESR 142
M G+ F GR++ V A + R
Sbjct: 65 IEGMEGQEFQGRDLRVQFAKQRR 87
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P + +T PRGFAFV+F D +A +A+
Sbjct: 271 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQDAEAA 330
Query: 123 MNGKRFAGREISVVLA 138
M+G RE+ V +A
Sbjct: 331 MDGAVLDERELRVRMA 346
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P +ELR FE++G + +++LP D +G +GF VQ+ D AAEA H
Sbjct: 315 GRLFVRNLPYTATEDELRVHFEKYGALEEIHLPLD-ASGTSKGFVLVQYEDHAAAAEAFH 373
Query: 122 HMNGKRFAGREISVVLAAESRKR 144
+++G+ F GR + ++ AA R +
Sbjct: 374 NVDGEPFQGRLLHILPAAAKRDK 396
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++V+N+P + +++R F +G +R V +PK + RGFAF +FV EA A +
Sbjct: 721 IIVKNLPFEASKKDIRTLFGTYGQLRSVRVPK-KFDNTARGFAFAEFVTAREAENAIEAL 779
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGG 157
GR + + AAE EE ++ + + G
Sbjct: 780 KDTHLLGRRLVIEFAAEDAVDAEEEIEKMQKKVG 813
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFE---RFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
SL V N+ P+ LR FE R+G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDA 74
Query: 120 QHHMNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDAMDGAVLDGRELRVQMA 93
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRMLDGREIMVQFA 92
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ + EE R FE++G + L +D TG+ RGF FV FV+ AA A
Sbjct: 233 NFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAA 292
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K + G+++ V A + +R EE+R++H R S Y G
Sbjct: 293 VEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 338
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
D P D G+ +GF FV F +P EA++A MN + G+ + V LA
Sbjct: 420 DTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALA 468
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ + N+ D EE+ F +G + DVY+P++++T RGFAFV++V+ A A
Sbjct: 59 SVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVRYVEKQSADAAIDA 118
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+ K AGR I V +A E K+P+
Sbjct: 119 MHEKEIAGRIIRVGMAEE--KKPD 140
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVEK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRNVDGREIMVQFA 92
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ ++LR F RFG V D+Y+P+D YT E RGFAFV++ EA A
Sbjct: 16 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 75
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+G + GRE+ V +A R P
Sbjct: 76 MDGHKVDGREVRVQIAKYGRPTPN 99
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRMLDGREIMVQFA 92
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P C E+++ F + G + DV P D T P+GFAFV ++ P A A
Sbjct: 399 GRLFIRNLPYTCTEEDIKELFSKHGPLSDVLFPIDTLTKRPKGFAFVTYMIPENAVTALA 458
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYR-SRSLSRSR 180
++G F GR + ++ + +++ + S GGP SS Y R + +++ + S
Sbjct: 459 QLDGHIFQGRMLHLLPSTAKKEKSD-----------SDAGGPGSSSYKRQKDAKTKALSS 507
Query: 181 SPHH 184
S H+
Sbjct: 508 SSHN 511
Score = 45.1 bits (105), Expect = 0.043, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRN+P E+R F FG ++ V LPK +G RGF FV F+ +
Sbjct: 798 KKQTGSKILVRNVPFQASVREIRELFCTFGELKTVRLPKKAAGSGSHRGFGFVDFLTKQD 857
Query: 116 AAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A +A H+ G+R V+ A++ + E +R++
Sbjct: 858 AKKAFAALCHSTHLYGRRL------VLEWADAEETVEALRRK 893
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+L+ FE++G V DVY+P+ YT + RGFAFV+F D + +A
Sbjct: 15 SLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFVRFYDKRDGEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
++G GRE+ V +A
Sbjct: 75 LDGYILDGRELRVQMA 90
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI L+ +E R FE++G + L D TG+ RGF FV FV AA+A
Sbjct: 236 NFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGFGFVNFVKHESAAKA 295
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N K + G+++ V A + +R EE+R+++
Sbjct: 296 VDELNDKDWKGQKLYVGRAQKKHEREEELRKQYE 329
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla gorilla
gorilla]
Length = 282
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T P GFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 49 GGGGYGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
GGGG R +G SL + N+ P +LR FER+G + DV++P+D Y+ + +GF
Sbjct: 4 GGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFG 63
Query: 107 FVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 142
FV+F + +A A +GK GRE+ V LA R
Sbjct: 64 FVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR 99
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI + L F+++G V D+++P+D TGE RGFAFV++ EA++A
Sbjct: 17 SLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
++ L V N+ +ELR+ F +FG V DVY+ D TG PRGFAFV P EA
Sbjct: 1 MSNSKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKI 60
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEE 147
A +NG GR ++V + RP+E
Sbjct: 61 AAEKLNGVDLGGRALTV-----NEARPKE 84
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+R+G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEAQDAIDG 76
Query: 123 MNGKRFAGREISVVLA 138
++G RF GR + V A
Sbjct: 77 LDGMRFGGRALMVQFA 92
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ + EE R FE++G + L +D TG+ RGF FV FV+ AA A
Sbjct: 233 NFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNHDSAAAA 292
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K + G+++ V A + +R EE+R++H R S Y G
Sbjct: 293 VEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 338
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
D P D G+ +GF FV F +P EA++A MN + G+ + V LA
Sbjct: 420 DTKKPTDKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALA 468
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 50/80 (62%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
++ SLLV NI ++L F+++G V D+++P+D TGE RGFAFV++ EA +
Sbjct: 13 KDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQK 72
Query: 119 AQHHMNGKRFAGREISVVLA 138
A ++G+ GREI+V A
Sbjct: 73 AVDRLDGRIVDGREITVQFA 92
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + NI P++LR FE++G + D+++P+D YT + +GF FV+F +A A
Sbjct: 291 SLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDR 350
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSS 166
M+G+ GREI V +A +RP + R R+ GGSS G RSS
Sbjct: 351 MDGRWVDGREIRVAMA--RYERPIDERSRN---GGSS--GYRSS 387
>gi|312066967|ref|XP_003136521.1| hypothetical protein LOAG_00933 [Loa loa]
Length = 345
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 67/152 (44%), Gaps = 36/152 (23%)
Query: 54 GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPR--GFAFVQF- 110
GR ++ +L VR + RP++LRA FER G VRDVY+P DYYT E R G VQ
Sbjct: 6 GRYRDDEIPTLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRVGGVGKVQAF 65
Query: 111 ---------------VDPYE----AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
V +E A +A +NG GR I V A RK EMR R
Sbjct: 66 SVSGISSTNYQANLQVQVFEFTRDAEDALRKLNGASILGRPIEVEWAEGQRKTKTEMRAR 125
Query: 152 HRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPH 183
Y YR R+ RSRSPH
Sbjct: 126 DS--------------YSSYRVRNRYRSRSPH 143
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F ++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRVVDGREITVQFA 92
>gi|296411493|ref|XP_002835465.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629249|emb|CAZ79622.1| unnamed protein product [Tuber melanosporum]
Length = 289
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 26 YYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERF 85
Y +P RG G G S G GG Y R + +L V N+ +LR FERF
Sbjct: 181 YVAPHLRGKKGAGES-----MSGTGGSYKDR--DDLATLRVTNVSEFAEESDLREMFERF 233
Query: 86 GVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
G V V+L KD TG +GFAF+ +VD +AA+A M+G
Sbjct: 234 GRVTRVFLAKDRDTGRAKGFAFISYVDRSDAAKACERMDG 273
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI D EE R FE+FG + L +D +G+ RGF FV F AA A
Sbjct: 233 NFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAA 292
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
++N K F +++ V A + +R EE+R+++ R S Y G
Sbjct: 293 VDNLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 338
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREI 133
M+G GRE+
Sbjct: 75 MDGAVLDGREL 85
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + N+ E LR F +FG + DVY+PKD + GE RGFAFV+F D +A +A
Sbjct: 14 SLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFHDKRDAGDAIDD 72
Query: 123 MNGKRFAGREISV 135
+ GK GREI V
Sbjct: 73 LAGKDLDGREIRV 85
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F ++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRVVDGREITVQFA 92
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F ++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRVVDGREITVQFA 92
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR E++G V D Y+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V +A
Sbjct: 75 MDGAVLDGRELRVQMA 90
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P C E+L+ F + G + +V P D T +P+GFAFV ++ P A A
Sbjct: 398 GRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALA 457
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
++G+ F GR + V+ SR + E+ Q G SSY
Sbjct: 458 QLDGQTFQGRVLHVM---ASRLKKEKADQGPDAPGSSSY 493
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
++Q +LVRNIP +ELR F FG ++ V LPK G RGF F+ F+ +A
Sbjct: 799 RKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDA 858
Query: 117 AEA------QHHMNGKRF 128
+A H+ G+R
Sbjct: 859 KKAFSALCHSTHLYGRRL 876
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ + EE R FE++G + + +D TG+ RGF FV FV AA A
Sbjct: 234 NFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKHESAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K + G+++ V A + +R EE+R++H R S Y G
Sbjct: 294 VEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+ C+ ++L F ++G + +V+LP D +T + +GFAFV F+ P A +A
Sbjct: 365 GRLYVRNLAYCCKEDDLEQLFTKYGTLSEVHLPIDSFTKKVKGFAFVSFMFPEHAVKAFQ 424
Query: 122 HMNGKRFAGREISVV 136
++GK + GR + ++
Sbjct: 425 ELDGKSWMGRILHIL 439
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 55 RRKEQNHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQ 109
R+K Q G +LVRNIP + + +E++ F FG ++ LP+ +G+ RGFAFV
Sbjct: 757 RKKTQVLGKASSKILVRNIPFEAKQDEVKQLFSVFGELKTARLPRKLAGSGQHRGFAFVD 816
Query: 110 FVDPYEAAEA------QHHMNGKRFA 129
F+ +A A H+ G+R
Sbjct: 817 FLSKEDAQRAFDALCHSTHLYGRRLV 842
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRAVDGRNIVVQSA 92
>gi|281427346|ref|NP_001163962.1| RNA binding motif protein 19 [Xenopus (Silurana) tropicalis]
gi|189442184|gb|AAI67335.1| Unknown (protein for MGC:135501) [Xenopus (Silurana) tropicalis]
Length = 542
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C ++L F ++G + +++ P D T +P+GFAFV F+ A +A
Sbjct: 386 GRLFVRNLPYTCNEDDLEKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHAVKAYA 445
Query: 122 HMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ +A + E
Sbjct: 446 EVDGQIFQGRMLHVLPSAAKKDEVNE 471
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G + D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVER 77
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 78 LDGRLVDGREIMVQFA 93
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 123 MNGKRFAGREISVVLAAESRK 143
++G+ GR I V A RK
Sbjct: 77 LDGREVDGRHIVVQFAKYGRK 97
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+P +ELR F +FG + DVY+P+ + E RGFAFV+F++ +A +A
Sbjct: 358 TLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKRDAEDAIDG 417
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
M G+ F GR++ V A ++RP+ R+
Sbjct: 418 MEGQEFQGRDLRVQFA--KQRRPDNPRE 443
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V DV++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRVVDGREIMVQFA 92
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 49 GGGGYGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
GGGG R +G SL + N+ P +LR FER+G + DV++P+D Y+ + +GF
Sbjct: 4 GGGGDRRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFG 63
Query: 107 FVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 142
FV+F + +A A +GK GRE+ V LA R
Sbjct: 64 FVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDR 99
>gi|302923914|ref|XP_003053775.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
gi|256734716|gb|EEU48062.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+P E+LR FE FG + +V+LP + +G +GFA V F DP A EA M
Sbjct: 312 LFVRNLPYSATEEDLRETFEGFGTLEEVHLPANK-SGTSKGFALVLFSDPSGAVEAFQAM 370
Query: 124 NGKRFAGREISVVLAAESR 142
+G F GR + ++ A+ R
Sbjct: 371 DGATFQGRILHIIPASAKR 389
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPK--DYYTGEPRGFAFVQFVDPYEAAEAQH 121
++++N+P +++R+ F +G +R V LPK DY PRGFAF FV P EA A +
Sbjct: 716 IIIKNLPFQATKKDIRSLFGTYGQLRSVRLPKKADYT---PRGFAFADFVTPREAENALN 772
Query: 122 HMNGKRFAGREISV 135
+ GR++ +
Sbjct: 773 ALRDTHLLGRKLVL 786
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+P D + ++L A FE FG + +V++P D +G +GFA++Q+ DP A A
Sbjct: 314 LFVRNLPYDVQRDDLEAEFEPFGNLEEVHIPLDKKSGSAKGFAYIQYSDPDSAERALVDR 373
Query: 124 NGKRFAGREISVV 136
+G+ F GR I ++
Sbjct: 374 DGQTFQGRLIHII 386
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 33 GYGGRG-RSPPRRGYGGGGGGYGRRK---EQNHGS----LLVRNIPLDCRPEELRAPFER 84
GY G + R + G RRK E+ S L+++N+P + +++RA
Sbjct: 675 GYTLEGHKLQIRASHKGADAAEERRKADAEKKAASAKTKLVIKNLPFEASKKDVRALLGA 734
Query: 85 FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
+G +R V +PK RGF F +F EA A + GR + +
Sbjct: 735 YGQLRSVRVPKKMDRA-ARGFGFAEFTTIKEAQSAMEALRDTHLLGRRLVI 784
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum
Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum
Liverpool]
Length = 1099
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
HG LL++N+P +ELRA E +G V + +L D T +PRGF FV FV P A A
Sbjct: 493 HGRLLIQNLPFATAVDELRALCEEYGEVAEAHLVVDEETRKPRGFGFVTFVFPEHAVAAL 552
Query: 121 HHMNGKRFAGREI 133
+NG F GR +
Sbjct: 553 PRLNGSIFQGRLL 565
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+LV+N+ +LR F +G V V +P+ + G RGFAFV F EA A +
Sbjct: 1015 VLVKNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFAFVDFATKQEAQNAVDAL 1073
Query: 124 NGKRFAGREISV 135
+G GR + +
Sbjct: 1074 SGSHLYGRRLVL 1085
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P D E+L++ F RFG + ++++ D +GFA+ QF DP A EA
Sbjct: 290 GRLFIRNLPYDTTEEDLQSEFARFGKLEELHIAFDSRHSTSKGFAYAQFFDPDSAIEAYK 349
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + VL A S+K
Sbjct: 350 QLDGKDFQGRLMH-VLPASSKK 370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P +++++ F +G +R V +PK + RGFAF FV EA A +
Sbjct: 693 IIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKF-DRTARGFAFADFVSAREAENAMDAL 751
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQR 151
GR++ + +E PEE Q+
Sbjct: 752 RNTHLLGRKLVLEFVSEEAVDPEEEIQK 779
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L F+++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKAVEK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRVVDGREIMVRFA 92
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L A F+R G V D+ +P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR+I V A
Sbjct: 77 LDGRTVDGRDIMVQFA 92
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P D E+L++ F RFG + ++++ D +GFA+ QF DP A EA
Sbjct: 290 GRLFIRNLPYDTTEEDLQSEFARFGKLEELHIAFDSRHSTSKGFAYAQFFDPDSAIEAYK 349
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + VL A S+K
Sbjct: 350 QLDGKDFQGRLMH-VLPASSKK 370
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P +++++ F +G +R V +PK + RGFAF FV EA A +
Sbjct: 693 IIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKF-DRTARGFAFADFVSACEAENAMDAL 751
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQR 151
GR++ + +E PEE Q+
Sbjct: 752 RNTHLLGRKLVLEFVSEEAVDPEEEIQK 779
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 9/98 (9%)
Query: 51 GGYGRRKEQNHG---SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF 107
GG RR + G SL + N+ P +LR FER+G + DV++P+D Y+ + +GF F
Sbjct: 4 GGGDRRAAPDIGGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGF 63
Query: 108 VQFVDPYEAAEAQHHM---NGKRFAGREISVVLAAESR 142
V+F YE +A+H M +GK GRE+ V LA R
Sbjct: 64 VRF---YERRDAEHAMDRTDGKNVDGRELRVTLAKYDR 98
>gi|378726539|gb|EHY52998.1| eukaryotic translation initiation factor 3 subunit G [Exophiala
dermatitidis NIH/UT8656]
Length = 297
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 43 RRGYGGGGGGYGRRKEQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGE 101
R+G G G G + E++ +L V N+ +ELR FERFG V V+L KD TG
Sbjct: 197 RKGAAGAGERMGGKFERDDLATLRVTNVSEMAEEQELRDLFERFGRVTRVFLAKDRDTGR 256
Query: 102 PRGFAFVQFVDPYEAAEAQHHMNG 125
+GFAF+ FVD +AA A M+G
Sbjct: 257 AKGFAFISFVDRADAARACEKMDG 280
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 48 GGGGGYGRR----KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPR 103
G GG G + SL V N+ PE+LR FER G V D+Y+P+D YT E R
Sbjct: 5 GSAGGLGGTRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESR 64
Query: 104 GFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
GFAFV+F D +A +A M+G+ GRE+ V +A
Sbjct: 65 GFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMA 99
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G + D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 77
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 78 LDGRLVDGREIMVQFA 93
>gi|60416093|gb|AAH90711.1| Rbm19 protein, partial [Danio rerio]
Length = 802
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P C E+L+ F + G + +V P D T +P+GFAFV ++ P A A
Sbjct: 399 GRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALA 458
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
++G F GR + V+ SR + E+ Q G SSY
Sbjct: 459 QLDGHTFQGRVLHVM---ASRLKKEKADQGPDAPGSSSY 494
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P D E+L++ F RFG + ++++ D +GFA+ QF DP A EA
Sbjct: 290 GRLFIRNLPYDTTEEDLQSEFARFGKLEELHVAFDSRHSTSKGFAYAQFFDPDSAIEAYK 349
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + VL A S+K
Sbjct: 350 QLDGKDFQGRLMH-VLPASSKK 370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P +++++ F +G +R V +PK + RGFAF FV EA A +
Sbjct: 693 IIIKNLPFQATKKDVQSLFGAYGQLRSVRVPKKF-DRTARGFAFADFVSAREAENAMDAL 751
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQR 151
GR++ + +E PEE Q+
Sbjct: 752 RNTHLLGRKLVLEFVSEEAVDPEEEIQK 779
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P + +T PRGFAFV+F D +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLA 138
M+G RE+ V +A
Sbjct: 75 MDGAVLDERELRVRMA 90
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L A F+R G V D+ +P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR+I V A
Sbjct: 77 LDGRTVDGRDIMVQFA 92
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ E+L F+++G + D+Y+P+D T E RGFAFV++ + +A +A
Sbjct: 19 SLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRYYEERDAEDAMDS 78
Query: 123 MNGKRFAGREISVVLA 138
M+GK GREI V +A
Sbjct: 79 MDGKVIDGREIRVAMA 94
>gi|302676924|ref|XP_003028145.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
gi|300101833|gb|EFI93242.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
Length = 743
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+ C ++L F G + V++P D T + +G A+V FV+P +A +A +
Sbjct: 237 LFVRNLAFSCTTDDLTELFSPLGALSQVHIPVDAMTKQSKGMAYVTFVNPEDAVKAYQML 296
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+ K F GR + ++ A + R + E++ + R
Sbjct: 297 DKKSFQGRILHLLPAVDRRPKAEDVTDKKR 326
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++V+N+P + +++R F G ++ V LP+ + RGFAF+ FV EA A +
Sbjct: 625 MIVKNVPFEATKKDIRELFGAHGQLKSVRLPR-KFDARARGFAFLDFVTRQEAENAMAAL 683
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQR 151
GR + + A E + E +R++
Sbjct: 684 RHTHLLGRHLVLEWAEEGEQDIEALRKK 711
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F ++G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G GREI+V A
Sbjct: 77 LDGTMVDGREITVQFA 92
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P C E+L+ F + G + +V P D T +P+GFAFV ++ P A A
Sbjct: 398 GRLFIRNMPYTCTEEDLKEVFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALA 457
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
++G F GR + V+ SR + E+ Q G SSY
Sbjct: 458 QLDGHTFQGRVLHVM---ASRLKKEKADQGPDAPGSSSY 493
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
++Q +LVRNIP +ELR F FG ++ V LPK G RGF F+ F+ +A
Sbjct: 799 RKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDA 858
Query: 117 AEA------QHHMNGKRF 128
+A H+ G+R
Sbjct: 859 KKAFSALCHSTHLYGRRL 876
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 63.9 bits (154), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C E++R F + G + +V P D T +P+GFAFV ++ P A A
Sbjct: 398 GRLFVRNLPYTCTEEDIRELFSKHGPLSEVLFPIDNLTKKPKGFAFVTYMIPENAVTALA 457
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYR 172
++ F GR + ++ + ++ PE S GGP SS Y R +
Sbjct: 458 QLDRHVFQGRMLHLLPSTVKKENPES----------SDAGGPGSSSYKRQK 498
Score = 45.1 bits (105), Expect = 0.044, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRN+P E+R F FG ++ V LPK +G RGF FV F+ +
Sbjct: 793 KKQTGSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKAAGSGNHRGFGFVDFITKQD 852
Query: 116 AAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A +A H+ G+R V+ A++ + E +R++
Sbjct: 853 AKKAFAALCHSTHLYGRRL------VLEWADAEETVEALRRK 888
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F ++G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G GREI+V A
Sbjct: 77 LDGTMVDGREITVQFA 92
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G + VRN+ + E+L F +FG + ++++P DY + + +G AF+ ++ P A +A +
Sbjct: 361 GRIFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQALN 420
Query: 122 HMNGKRFAGREISVV 136
M+GK F GR I V+
Sbjct: 421 DMDGKVFQGRLIHVL 435
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P + +E+R F +G ++ V +PK G RGF FV+F+ EA A +
Sbjct: 797 IIIKNLPFESTIKEIRKLFTAYGEIQSVRIPKKPNGGH-RGFGFVEFLTEEEAKNAMEAL 855
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQR 151
F GR + V+ AE K +E+R++
Sbjct: 856 GNSHFYGRHL-VLQYAEQDKNIDELREK 882
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV N+ ++L A F+R G V D+ +P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQKAVDK 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR+I V A
Sbjct: 77 LDGRTVDGRDIMVQFA 92
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G + D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRLVDGREIMVQFA 92
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
+EL+ F FG + DV + +D YTG+ +GF F+QF EA EA MNG AGREI V
Sbjct: 434 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 493
Query: 136 VLAAESR 142
A +S+
Sbjct: 494 SYAQDSK 500
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P C E+L+ F + G + +V P D T +P+GFAFV ++ P A A
Sbjct: 399 GRLFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTYMIPENAVSALA 458
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
++G F GR + V+ SR + E+ Q G SSY
Sbjct: 459 QLDGHTFQGRVLHVM---ASRLKKEKADQGPDAPGSSSY 494
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
++Q +LVRNIP +ELR F FG ++ V LPK G RGF F+ F+ +A
Sbjct: 800 RKQTTSKILVRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDA 859
Query: 117 AEA------QHHMNGKRF 128
+A H+ G+R
Sbjct: 860 KKAFSALCHSTHLYGRRL 877
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ PE+LR FER G V D+Y+P+D +T E RGFAFV++ D +A +A
Sbjct: 15 SLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVRYRDAEDALDA--- 71
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GRE+ V +A
Sbjct: 72 MDGRMLDGRELRVQMA 87
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C ++LR F FG++ +V+LP D + +GFAFVQFV P +A +A
Sbjct: 333 GRLFVRNLPYTCTEDDLRDLFGSFGMLSEVHLPVDDVK-KGKGFAFVQFVIPEDAGKALE 391
Query: 122 HMNGKRFAGREISVV 136
++ F GR + ++
Sbjct: 392 QLDRHAFHGRLLHII 406
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+++RNIP +E+R FG ++ V LPK + G RGFAFV F+ EA A+ +
Sbjct: 758 IIIRNIPFQATAKEIRELCSSFGQLKRVRLPKKFDGGH-RGFAFVDFLTAQEAMGAKKSL 816
Query: 124 NGKRFAGREI 133
F GR +
Sbjct: 817 ESTHFYGRHL 826
>gi|428185150|gb|EKX54003.1| hypothetical protein GUITHDRAFT_132430 [Guillardia theta CCMP2712]
Length = 162
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N L V IP E+LR FE+FG V D Y+ KD TG RGFAF+ F A++A
Sbjct: 57 NDKKLFVSGIPFALSSEDLRETFEKFGPVEDSYVVKDRETGRSRGFAFITFSSKEAASQA 116
Query: 120 QHHMNGKRFAGREISVVLAAESRKRP 145
+N GR + V A + +P
Sbjct: 117 CSALNESDLGGRTVKVSFAKDRDDQP 142
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ E+LR F R+G V DVY+P+D YT E RGFAFV++ EA A
Sbjct: 16 SLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFAFVRYPTDREADSAIRE 75
Query: 123 MNGKRFAGREISV 135
M+G+R GREI V
Sbjct: 76 MDGRRIDGREIRV 88
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G + D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVER 77
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 78 LDGRLVDGREIMVQFA 93
>gi|431915005|gb|ELK15824.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 390
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + +D + L A F ++G + +V L KD T RGFAF+ F +P +A +A
Sbjct: 8 GKLFIGGLNIDTNEKALEAVFGKYGPIIEVLLMKDRETNRSRGFAFITFENPEDAKDATK 67
Query: 122 HMNGKRFAGREISVVLA 138
MNGK G+ I V A
Sbjct: 68 DMNGKSLDGKLIKVEQA 84
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + N+ E LR F ++G + DVY+PKD Y GE RGFAFV+F D +A +A
Sbjct: 14 SLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDKRDAGDAIDQ 72
Query: 123 MNGKRFAGREISVVLAAESR 142
++G+ GREI V A R
Sbjct: 73 LDGRDIDGREIRVDYARHER 92
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + N+ E LR F ++G + DVY+PKD Y GE RGFAFV+F D +A +A
Sbjct: 14 SLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDKY-GESRGFAFVRFHDKRDAGDAIDQ 72
Query: 123 MNGKRFAGREISVVLAAESR 142
++G+ GREI V A R
Sbjct: 73 LDGRDIDGREIRVDYARHER 92
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|190348274|gb|EDK40698.2| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 54 GRRKEQNHGSLLVRNIPLDCR-PEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVD 112
G+ E+ L+VRN+P C+ PE L+ F RFG V D Y+P+ G+ GFAF+
Sbjct: 138 GKTVEKRRARLIVRNLPWSCKDPETLKKTFSRFGAVFDAYIPR-KKGGQMSGFAFITMKK 196
Query: 113 PYEAAEAQHHMNGKRFAGREISVVLAAESRK 143
A +A G + GRE++V LA E K
Sbjct: 197 QAAADKAVKESVGLKIDGREVAVDLAVEKSK 227
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
Y R +Q ++ VRNIP D + L+ F +FG V+ D TG RG AFV FV
Sbjct: 291 YKPRNKQEPYAVFVRNIPYDADQDSLKEHFSQFGDVKYALPVIDKETGLARGSAFVAFV 349
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L VR++P EEL F +F V+ + D GE RGF FV F + A
Sbjct: 43 TLFVRSVPAGTTNEELSEHFSQFVPVKHAVVVTDE-KGEGRGFGFVSFTMDDDTLTALVE 101
Query: 123 MNGKRFAGREISVVLA 138
+F GR + V +A
Sbjct: 102 SKKVKFKGRLLRVDIA 117
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 38 GRSPPR---RGYGGGGGGYGRRKEQ--NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVY 92
++PP+ + + G G +E + G L VRN+P E+L F +G + +++
Sbjct: 373 AKAPPKNSSKAWQGRTLGENEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSAYGPLSELH 432
Query: 93 LPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRH 152
P D T +P+GFAFV F+ P A +A ++G+ F GR + V+ P +++
Sbjct: 433 YPIDTLTKKPKGFAFVTFLFPEHAVKAYAEVDGQVFQGRMLHVL--------PSTIKK-- 482
Query: 153 RFRGGSSYGGPRSSYYGRYRSRSLSRSRSPHH 184
G G P SSY + ++ + S S H+
Sbjct: 483 --EAGEEAGAPGSSYKKKKDAKDKANSSSSHN 512
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F +
Sbjct: 828 RKQTTSKILVRNIPFQADLREIRELFSTFGELKTVRLPKKMAGTGRHRGFGFVDFFTKQD 887
Query: 116 AAEA------QHHMNGKRFAGR--EISVVLAAESRKRPE 146
A A H+ G+R + V L A RK E
Sbjct: 888 AKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAE 926
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +L +N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 582 ERSKTVILAKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 635
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 636 KAFRHLAYSKF 646
>gi|241627928|ref|XP_002408123.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215501127|gb|EEC10621.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 105
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 84 RFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRK 143
++G + DVY+P DYY PRGFA+VQF D +A +A + ++ RF GRE+ + A RK
Sbjct: 1 KYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYSLDWTRFYGRELEIEFAQGDRK 60
Query: 144 RPEEMRQR 151
P R R
Sbjct: 61 TPRRSRSR 68
>gi|296812975|ref|XP_002846825.1| eukaryotic translation initiation factor 3 [Arthroderma otae CBS
113480]
gi|238842081|gb|EEQ31743.1| eukaryotic translation initiation factor 3 [Arthroderma otae CBS
113480]
Length = 293
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 35 GGRGRS-----PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
GG G+S PP GG G G G+ + + +L V N+ +ELR FERFG
Sbjct: 175 GGLGQSGGSYVPPAMRKGGAGAGDKMGGKYERDDLATLRVTNVSELAEEQELRDMFERFG 234
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V V+L KD T +GFAF+ FVD +AA A M+G
Sbjct: 235 RVTRVFLAKDRETNMAKGFAFISFVDRSDAARACEKMDG 273
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F +G + +++ P D T +P+GFAFV F+ P A +A
Sbjct: 395 DSGRLFVRNLPYTSTEEDLEKLFSTYGPLSELHFPIDSLTKKPKGFAFVTFLFPEHAVKA 454
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
++G+ F GR + V+ P +R+ G P SSY + S+ + S
Sbjct: 455 YSAVDGQVFQGRMLHVL--------PSTIRK----EASEEAGAPGSSYKRKKDSKDKANS 502
Query: 180 RSPHH 184
S H+
Sbjct: 503 ASSHN 507
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 822 RKQTTSKILVRNIPFQASLREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQD 881
Query: 116 AAEA------QHHMNGKRFA 129
A A H+ G+R
Sbjct: 882 AKRAFNALCHSTHLYGRRLV 901
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +L +N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 577 ERSKTVILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFLEPLEAR 630
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 631 KAFRHLAYSKF 641
>gi|387018118|gb|AFJ51177.1| Heterogeneous nuclear ribonucleoprotein G-like [Crotalus
adamanteus]
Length = 384
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + ++ + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKSIKVEQATK 86
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 151
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ ++LR F RFG V D+Y+P+D YT E RGFAFV++ EA A
Sbjct: 16 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 75
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+G + GRE+ V A R P
Sbjct: 76 MDGHKVDGREVRVQRAKYGRPTPN 99
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G + D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 77
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 78 LDGRLVDGREIMVQFA 93
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TG+ RGFAF ++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFFRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++GK GR I V A
Sbjct: 77 LDGKNVDGRYIMVQFA 92
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 46 YGGGGGGYGRRKEQ---------NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKD 96
GGG + + Q G L +RN+P D ++LR F FG + +V++P D
Sbjct: 283 ISGGGAATEKTEAQVSTEIESIRQTGRLFLRNLPYDVSEDDLRDYFNSFGTLEEVHVPLD 342
Query: 97 YYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRK 143
TG +GFA+V F + +A A ++G+ F GR + ++ AA R+
Sbjct: 343 AKTGSGKGFAYVLFEESNDAVRAYEDLDGRIFQGRLLHIIPAAAKRE 389
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 48 GGGGGYGRRKEQN-------HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG 100
G RRKE ++++N+P + +++RA F +G +R V +PK +
Sbjct: 691 GLDAAEERRKEDKAKKAAGRQTKVIIKNLPFEATKKDIRALFGAYGQLRSVRVPK-KFDA 749
Query: 101 EPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
RGFAF F P EA A + GR++ +
Sbjct: 750 SARGFAFADFTTPREAENAMDALRNTHLLGRKLVL 784
>gi|229485954|sp|P0C8Z4.1|RMXL3_PANTR RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 992
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V + L + L+A F ++G + V+L KD T + RGFAFV F P +A A M
Sbjct: 10 LFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARDM 69
Query: 124 NGKRFAGREISVV 136
NGK G+ I V
Sbjct: 70 NGKYLDGKAIMVA 82
>gi|449662790|ref|XP_004205613.1| PREDICTED: serine/arginine-rich splicing factor 12-like [Hydra
magnipapillata]
Length = 73
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
S+ VRN+ D RPE+LR FE++G + DVY+P DYYT E RGFA++Q++
Sbjct: 11 SVFVRNVHHDVRPEDLRRVFEKYGDISDVYVPLDYYTRESRGFAYIQYL 59
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ ++LR F RFG V D+Y+P+D YT E RGFAFV++ EA A
Sbjct: 16 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 75
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+G + GRE+ V A R P
Sbjct: 76 MDGHKVDGREVRVQRAKYGRPTPN 99
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + NI P++LR FE++G + D+++P+D YT + +GF FV++ +A A
Sbjct: 15 SLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYYSRRDAEYAMDR 74
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GREI V LA
Sbjct: 75 MDGRWIDGREIRVALA 90
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris gallopavo]
Length = 239
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGR 131
D +A +A M+G GR
Sbjct: 63 HDKRDAEDAMDAMDGAVLDGR 83
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|258565855|ref|XP_002583672.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
gi|237907373|gb|EEP81774.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
Length = 772
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P + E+LR+ F RFG + ++++ D +GFA+ QFVDP A EA
Sbjct: 295 GRLFLRNLPYNTTEEDLRSLFTRFGKIEELHVAFDTRHSTSKGFAYAQFVDPDSAIEAYK 354
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++G+ F GR + +L A S+K
Sbjct: 355 ELDGRDFQGRLMH-ILPASSKK 375
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P +++++ F +G +R + +PK + RGFAF FV EA A +
Sbjct: 698 IIIKNLPFQATKKDIQSLFGAYGQLRSLRVPKK-FDRTARGFAFADFVSAREAENAMDAL 756
Query: 124 NGKRFAGREISV 135
GR + +
Sbjct: 757 RNTHLLGRRLVL 768
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ + EE R F ++G + + D TG+ RGF FV FV AA A
Sbjct: 234 NFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K F G+++ V A + +R EE+R++H R S Y G
Sbjct: 294 VEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V+N+P D E+LR FE+FG + + D TG RGF FV F + + +A
Sbjct: 340 NLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADGEKAIQA 399
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYG 169
M+ K + G+ + V +A + R E ++Q R+R G GG + +Y G
Sbjct: 400 MHLKLYGGKPLFVAVAEKRDARIERLQQ--RYRAGIPMGGFQQNYQG 444
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GRE+ V A
Sbjct: 77 LDGRLVDGREMMVQFA 92
>gi|332211654|ref|XP_003254929.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Nomascus
leucogenys]
Length = 393
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|327302826|ref|XP_003236105.1| eukaryotic translation initiation factor 3 [Trichophyton rubrum CBS
118892]
gi|326461447|gb|EGD86900.1| eukaryotic translation initiation factor 3 [Trichophyton rubrum CBS
118892]
Length = 284
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 35 GGRGRS-----PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
GG G+S PP GG G G G+ + + +L V N+ +ELR FERFG
Sbjct: 175 GGLGQSGGSYVPPAMRKGGAGVGDKMGGKYERDDLATLRVTNVSELAEEQELRDMFERFG 234
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGR 131
V V+L KD T +GFAF+ F D +AA A M+G FA +
Sbjct: 235 RVTRVFLAKDRETNMAKGFAFISFADRSDAARACDKMDGFEFAKK 279
>gi|434396627|ref|YP_007130631.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428267724|gb|AFZ33665.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 102
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V NIP + E+L + F +G V VYLP D TG RGF FV+ + E +A
Sbjct: 2 SIYVGNIPYEVTQEDLSSIFAEYGTVTRVYLPVDRETGRMRGFGFVEMSNETEEDQAIET 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGS 158
++G + GRE+ V ++ RP+E + GG+
Sbjct: 62 LDGAEWMGRELRV-----NKARPKENNNNRNYSGGN 92
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F RFG + +++ P D T +P+GFAFV F+ P A +A
Sbjct: 393 DSGRLFVRNLPYSSTEEDLEQLFSRFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 452
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 453 YAEVDGQVFQGRMLHVL 469
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 819 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMSGTGSHRGFGFVDFLTKQD 878
Query: 116 AAEAQH------HMNGKR----FAGREISV 135
A A H H+ G+R +A E+S+
Sbjct: 879 AKRAFHALCHSTHLYGRRLVLEWADSEVSL 908
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 576 ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFLEPLEAR 629
Query: 118 EAQHHM 123
A H+
Sbjct: 630 RAFRHL 635
>gi|326471199|gb|EGD95208.1| eukaryotic translation initiation factor 3 [Trichophyton tonsurans
CBS 112818]
gi|326485081|gb|EGE09091.1| eukaryotic translation initiation factor 3 [Trichophyton equinum
CBS 127.97]
Length = 284
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 35 GGRGRS-----PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
GG G+S PP GG G G G+ + + +L V N+ +ELR FERFG
Sbjct: 175 GGLGQSGGSYVPPAMRKGGAGVGDKMGGKYERDDLATLRVTNVSELAEEQELRDMFERFG 234
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGR 131
V V+L KD T +GFAF+ F D +AA A M+G FA +
Sbjct: 235 RVTRVFLAKDRETNMAKGFAFISFADRSDAARACDKMDGFEFAKK 279
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V I R ++LR F +FG + DV++P D YTG RGF FV+F + +A +A
Sbjct: 11 SIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAEDAIRD 70
Query: 123 MNGKRFAGREISVVLAAESRK 143
M+ K F G I+V A +++
Sbjct: 71 MDNKEFQGCRITVAAAMYNKE 91
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P EL+A FE +G V +V+L D + + +GFA VQF DP +A +A
Sbjct: 16 DTGRLFVRNLPYSATEAELQALFEGYGDVSEVHLVLDRASKKSKGFALVQFADPQDAVKA 75
Query: 120 QHHMNGKRFAGREISVV 136
++ F GR I ++
Sbjct: 76 HAELDASIFQGRLIHIL 92
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++VRN+ + +++ F FG V LP+ + G RGFAFV F EA A +
Sbjct: 470 VVVRNVAFEATRKDIMGLFTPFGHVNSCRLPRKF-DGTHRGFAFVDFATKQEARNAMEAV 528
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQR 151
G GR + V+ AE +E+R +
Sbjct: 529 QGAHLYGRRL-VLEWAEEEGGLDELRAK 555
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE RA FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 165 NFTNIYVKNVEQDVTDEEFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDHEAASAA 224
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 225 VEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 270
>gi|345306629|ref|XP_001510789.2| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Ornithorhynchus anatinus]
Length = 420
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 42 PRRGYGGGGGGYGRRKEQNH---GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY 98
PR YG GY K G L + + + + L A F ++G + +V L KD
Sbjct: 11 PRAFYGRASSGYNTVKMVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRE 70
Query: 99 TGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAE 140
T + RGFAFV F P +A +A MNGK G+ I V A +
Sbjct: 71 TNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATK 112
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
+E + SL VRN+ L EEL F FG + D +P+DY TG +G+ FV++ + +EA
Sbjct: 303 EEIDMSSLYVRNLSLSMTKEELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYSNSHEA 362
Query: 117 AEAQHHMNGKRFAGREISV 135
A A H+NG G+++ V
Sbjct: 363 ANAIIHLNGHLVEGKKMEV 381
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
G GR+ + +L V ++PL E+L F G + + D YTG +GF FV+F
Sbjct: 696 GNEGRQIDM--ANLYVCHLPLYITTEKLIEIFLPCGQITQARVVTDRYTGISKGFGFVRF 753
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLA 138
D Y AA A HMNG G + V +A
Sbjct: 754 ADTYSAAVALTHMNGYPLEGHILEVRIA 781
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 54 GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDP 113
G+ KE ++ +L V N+P +L F FG + + + +TG +G+ FV++ DP
Sbjct: 196 GKLKEVDNTNLYVGNLPASVGSHKLIELFLPFGRIVRSKVADECFTGLSKGYGFVKYDDP 255
Query: 114 YEAAEAQHHMNGKRFAGREISVVLA 138
+ A A + MNG+ G+ + V +A
Sbjct: 256 HSATAAINRMNGRLVDGKILEVRVA 280
>gi|91080945|ref|XP_974350.1| PREDICTED: similar to CG4806 CG4806-PA [Tribolium castaneum]
gi|270005371|gb|EFA01819.1| hypothetical protein TcasGA2_TC007421 [Tribolium castaneum]
Length = 584
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L++RN+P + E L+ F +FG V++V + K G+ G FVQF +AA+A+HH+
Sbjct: 38 LVIRNLPFEATEENLKEHFAQFGEVQEVKVLKKE-DGKLVGCGFVQFKLVQKAAKARHHL 96
Query: 124 NGKRFAGREISVVLAAESRK 143
NGK F GREI V A K
Sbjct: 97 NGKPFLGREIEVDFALAKNK 116
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 46/83 (55%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ V N+ + E +R F +GV++D+ + D TG RGFAF+ + +P EA EA M
Sbjct: 6 IYVGNLKFTLKEENIRQIFSVYGVIQDLKMIHDRETGNFRGFAFITYANPEEAEEAVTQM 65
Query: 124 NGKRFAGREISVVLAAESRKRPE 146
NG+ GR + V A + RK +
Sbjct: 66 NGQPVDGRNLKVTFAEDKRKEKQ 88
>gi|406994267|gb|EKE13283.1| hypothetical protein ACD_13C00045G0007 [uncultured bacterium]
Length = 134
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V +P +EL+ F G V + D TG+ +GF FV+ EAA+A +
Sbjct: 5 LFVAGLPFSTTQDELKTLFSESGTVVSATVIMDKMTGQSKGFGFVEMETTEEAAKAISSL 64
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPR 164
N F GR + V A K EE R R F GG SYGGPR
Sbjct: 65 NETEFGGRTLIVAEA----KPMEERRDRADF-GGRSYGGPR 100
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + N+ E+L+ F + G + DVY+P+DYYT RGFAFV+F D A +A
Sbjct: 32 SLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRFKDRTAAEDAIKE 91
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRH 152
+ K GR I+ A + RP+ R+ H
Sbjct: 92 FDQKELNGRPIACRFA--EKPRPDNPREAH 119
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
+EL+ F FG + DV + +D YTG+ +GF F+QF EA EA MNG AGREI V
Sbjct: 271 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEAMTVMNGMEVAGREIKV 330
Query: 136 VLAAESR 142
A +S+
Sbjct: 331 SYAQDSK 337
>gi|395743087|ref|XP_003780683.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein,
X-linked-like-2 [Pongo abelii]
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGHIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|282896319|ref|ZP_06304341.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198815|gb|EFA73694.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 104
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+ D E+L++ F ++G V V LP D TG PRGF FV+ + E A
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDRETGRPRGFGFVEMSNEAEENAAIDA 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ 150
+NGK F GR++ V ++ RP E R+
Sbjct: 62 LNGKEFKGRQLKV-----NKARPREERE 84
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 43/80 (53%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V NI +R F G + DVY+P+D TG RGFAFV+F+D EA +A
Sbjct: 12 SLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFIDKNEAEDAIKA 71
Query: 123 MNGKRFAGREISVVLAAESR 142
MN K GR I V A E R
Sbjct: 72 MNEKEIEGRAIRVAFAEEPR 91
>gi|18399701|ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis thaliana]
gi|16604631|gb|AAL24108.1| unknown protein [Arabidopsis thaliana]
gi|27754736|gb|AAO22811.1| unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
GG G + ++ L++RN+P +P +++ F G V DV++PK++ TG P+GFAFV+F
Sbjct: 322 GGEGSKAQK--WKLIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKF 379
Query: 111 VDPYEAAEAQHHMNGKRFAGREISV 135
+AA A NG F R I+V
Sbjct: 380 TCKKDAANAIKKFNGHMFGKRPIAV 404
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
++ V +P +L F G VR +L + + E RGFAFV+F + A
Sbjct: 20 ATVCVSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKFALQEDVNRAIE 79
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
NG GR I+V AA RP +R + G S
Sbjct: 80 LKNGSTVGGRRITVKQAAH---RPSLQERRTKAAEGIS 114
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V NI D + +R F+ FG + D+Y+P+D T RGF FV+F + +A +A
Sbjct: 15 SLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRFYEEADADKAAEK 74
Query: 123 MNGKRFAGREISVVLA 138
M+G F GR++ V A
Sbjct: 75 MDGHAFEGRDLIVQKA 90
>gi|153252068|ref|NP_055284.3| RNA-binding motif protein, X-linked-like-2 [Homo sapiens]
gi|229462965|sp|O75526.3|HNRGT_HUMAN RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|146413741|ref|XP_001482841.1| hypothetical protein PGUG_04796 [Meyerozyma guilliermondii ATCC
6260]
Length = 713
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 54 GRRKEQNHGSLLVRNIPLDCR-PEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVD 112
G+ E+ L+VRN+P C+ PE L+ F RFG V D Y+P+ G+ GFAF+
Sbjct: 138 GKTVEKRRARLIVRNLPWSCKDPETLKKTFLRFGAVFDAYIPR-KKGGQMSGFAFITMKK 196
Query: 113 PYEAAEAQHHMNGKRFAGREISVVLAAESRK 143
A +A G + GRE++V LA E K
Sbjct: 197 QAAADKAVKESVGLKIDGREVAVDLAVEKSK 227
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFV 111
Y R +Q ++ VRNIP D + L+ F +FG V+ D TG RG AFV FV
Sbjct: 291 YKPRNKQEPYAVFVRNIPYDADQDSLKEHFSQFGDVKYALPVIDKETGLARGSAFVAFV 349
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Query: 42 PRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGE 101
P+ G R+ +L VR++P EEL F +F V+ + D GE
Sbjct: 28 PKSDLATVDDGLDRK------TLFVRSVPAGTTNEELSEHFSQFVPVKHAVVVTDE-KGE 80
Query: 102 PRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 138
RGF FV F + A +F GR + V +A
Sbjct: 81 GRGFGFVSFTMDDDTLTALVESKKVKFKGRLLRVDIA 117
>gi|294659673|ref|XP_002770625.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
gi|218511736|sp|Q6BI95.2|PABP_DEBHA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|199434145|emb|CAR65959.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
Length = 627
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ +NI LD EE + FE +G + +YL KD+ G+ +GF FV F + A +A
Sbjct: 230 NFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDH-EGKSKGFGFVNFENHESAVKA 288
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K G++I V A + R+R EE+++++ R S Y G
Sbjct: 289 VDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQG 334
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L ++N+ E+L F+ FG + + D TG+ +GF FV F P EA +A
Sbjct: 336 NLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDE-TGKSKGFGFVCFSSPEEATKAITE 394
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQ------RHRFRGGSSYGG 162
MN + G+ + V LA R ++ Q + R + ++ GG
Sbjct: 395 MNQRMIYGKPLYVALAQRKDVRRSQLEQQIQARNQMRMQNAAATGG 440
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 47 GGGGGGYGRRKEQ--NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRG 104
G G GGYG Q L V N+ D E +R+ FE++G V D +LP D TG PRG
Sbjct: 111 GTGPGGYGAFNPQGREDVKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRG 170
Query: 105 FAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
FAFV + EA A + +NG GR + V
Sbjct: 171 FAFVT-MPAKEAETACNKVNGMELDGRTVRV 200
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L + N+ +LR+ F FG V DV+LP + T PRGF FV A +A M
Sbjct: 21 LYIGNLDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAKM 80
Query: 124 NGKRFAGREISVVLAAESRKRPE 146
+ + GR I V ESR R E
Sbjct: 81 DQSQLDGRTIRV---NESRPRGE 100
>gi|350534520|ref|NP_001233578.1| RNA-binding motif protein, X-linked-like-2 [Pan troglodytes]
gi|343958222|dbj|BAK62966.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
gi|343961837|dbj|BAK62506.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Pan
troglodytes]
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|8576316|gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gi|119589071|gb|EAW68665.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 47/84 (55%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ ++LR F RFG V D+Y+P+D YT E RGFAFV++ EA A
Sbjct: 16 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYYTDREADCAIRG 75
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+G + GRE+ V A R P
Sbjct: 76 MDGHKVDGREVRVQRAKYGRPTPN 99
>gi|158257974|dbj|BAF84960.1| unnamed protein product [Homo sapiens]
Length = 392
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRVVDGREITVQFA 92
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ ++LR F RFG V D+Y+P+D YT E RGFAFV++ EA A
Sbjct: 3 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 62
Query: 123 MNGKRFAGREISV 135
M+G + GRE+ V
Sbjct: 63 MDGHKVDGREVRV 75
>gi|154418572|ref|XP_001582304.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916538|gb|EAY21318.1| hypothetical protein TVAG_166930 [Trichomonas vaginalis G3]
Length = 202
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 63 SLLVRNIPLD-CRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
+L VR P++ E L + F +G V+D+Y+PKD+ +G R A+V++ D EA++A
Sbjct: 3 TLFVR--PINHVSKEFLLSRFSEYGEVKDLYIPKDFKSGRRRTIAYVKYDDKVEASKAIE 60
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEM 148
+NGK G+EI V ++E +K P+EM
Sbjct: 61 GLNGKEINGKEIYVSWSSEKQKTPDEM 87
>gi|340377347|ref|XP_003387191.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like [Amphimedon queenslandica]
Length = 288
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 30 PRRGYGGRGRSPPRRGYGGGGGGYGR-----RKEQNHGSLLVRNIPLDCRPEELRAPFER 84
P R GG+ P RG G GG G R + ++ V N+ D R +LR F R
Sbjct: 169 PTRSSGGKYVPPSLRGSDGAGGKKGELMSHSRNDDEQAAVRVTNLSEDARESDLRELFGR 228
Query: 85 FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
FG ++ V+L KD T + +GFAF+ F +A A ++NG
Sbjct: 229 FGPIQRVFLAKDRKTQQSKGFAFIHFSSKEDAQSAITNLNG 269
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI P +L F+++G V D Y+P++ G RGFAFV+F +A +A
Sbjct: 28 SLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKAMEE 87
Query: 123 MNGKRFAGREISVVLA 138
M+G+ GR I+V A
Sbjct: 88 MDGREVDGRSITVQFA 103
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ E+L+ F + G V DVY+P++ E RGFAFV+F D +A EA
Sbjct: 75 SLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRFFDRRDAEEAMDA 134
Query: 123 MNGKRFAGREISVVLAAESR 142
++G R GRE+ + +A +R
Sbjct: 135 LDGYRLDGRELRIAMAKYAR 154
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
SL V N+ E+L+ F + G V DVY+P++ E RGFAFV+F
Sbjct: 16 SLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRF 63
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
HG LL++N+P +ELRA E +G V + +L D T PRGF FV FV P A +
Sbjct: 323 HGRLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVASL 382
Query: 121 HHMNGKRFAGREI 133
+NG F GR +
Sbjct: 383 PRLNGSIFQGRIL 395
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+LVRN+ +LR F +G V V +P+ + G RGF FV F EA A +
Sbjct: 913 VLVRNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFGFVDFATKQEAQNAVEAL 971
Query: 124 NGKRFAGREISV 135
G GR + +
Sbjct: 972 TGSHLYGRRLVL 983
>gi|426367314|ref|XP_004050678.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Gorilla
gorilla gorilla]
Length = 392
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + N+ P +LR FER+G + DV++P+D Y+ + +GF FV+F + +A A
Sbjct: 19 SLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 78
Query: 123 MNGKRFAGREISVVLAAESR 142
+GK GRE+ V LA R
Sbjct: 79 TDGKLVDGRELRVTLAKYDR 98
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|444723044|gb|ELW63709.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 1033
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F ++G V +++ P D T +P+GFAFV F+ P A +A
Sbjct: 502 DSGRLFVRNLPYTSTEEDLEKLFSKYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 561
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ + ++ EE
Sbjct: 562 YAQVDGQVFQGRMLHVLPSTIKKEASEE 589
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLP-KDYYTGE--PRGFAFVQFVDPYEAAEA 119
+L ++N+ D E LR F + G+V+ + K G GF FV++ P +A +A
Sbjct: 835 TLFIKNLNFDTAEETLRKVFSKVGMVKSCSISRKKNKAGALLSMGFGFVEYKKPEQAQKA 894
Query: 120 QHHMNGKRFAGREISV 135
+ G G ++ V
Sbjct: 895 LKQLQGHVVDGHKLEV 910
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+HG LL++N+P +ELRA E +G V + +L D T PRGF FV FV P A +
Sbjct: 322 SHGRLLIQNLPFATTVDELRALCEEYGEVAETHLVVDEETQRPRGFGFVSFVFPEHAVAS 381
Query: 120 QHHMNGKRFAGREI 133
+NG F GR +
Sbjct: 382 LPRLNGSIFQGRIL 395
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+LVRN+ +LR F +G V V +P+ + G RGF FV F EA A +
Sbjct: 913 VLVRNLAFQASASDLRGLFSAYGNVTRVCIPR-QHEGRSRGFGFVDFATKQEAQNAVEAL 971
Query: 124 NGKRFAGREISV 135
G GR + +
Sbjct: 972 TGSHLYGRRLVL 983
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G + D+Y+P+D TG+ RGFAFV++ EA +A
Sbjct: 18 SLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQKAVDR 77
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 78 LDGRLVDGREIMVQFA 93
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 38 GRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDY 97
GRSPPR SL V N+ ++LR F RFG V D+Y+P+D
Sbjct: 5 GRSPPR--------------IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDP 50
Query: 98 YTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPE 146
YT E RGFAFV++ EA A M+G + GRE+ V A R P
Sbjct: 51 YTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 38 GRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDY 97
GRSPPR SL V N+ ++LR F RFG V D+Y+P+D
Sbjct: 5 GRSPPR--------------IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDP 50
Query: 98 YTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
YT E RGFAFV++ EA A M+G + GRE+ V A R P R
Sbjct: 51 YTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPNRRR 102
>gi|367045462|ref|XP_003653111.1| hypothetical protein THITE_2063817 [Thielavia terrestris NRRL 8126]
gi|347000373|gb|AEO66775.1| hypothetical protein THITE_2063817 [Thielavia terrestris NRRL 8126]
Length = 299
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 50 GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
GG YG R + +L V N+ +ELR FERFG V V+L KD TG +GFAF+
Sbjct: 209 GGKYGER--DDFATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFIS 266
Query: 110 FVDPYEAAEAQHHMNGKRF 128
F D +A +A + M+G F
Sbjct: 267 FADRNDAIKACNKMDGFGF 285
>gi|8927581|gb|AAF82129.1|AF279289_1 testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 2 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVR 61
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 62 DMNGKSLDGKAIKVAQATK 80
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++P+D TGE RGFAFV++ EA++A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRMVDGREITVQFA 92
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ EE R F ++G + + D TG+ RGF FV FV AA A
Sbjct: 234 NFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K F G+++ V A + +R EE+R++H R S Y G
Sbjct: 294 VEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma mansoni]
Length = 102
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 14/109 (12%)
Query: 38 GRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDY 97
GRSPPR SL V N+ ++LR F RFG V D+Y+P+D
Sbjct: 5 GRSPPR--------------IDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDP 50
Query: 98 YTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPE 146
YT E RGFAFV++ EA A M+G + GRE+ V A R P
Sbjct: 51 YTFESRGFAFVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYGRPTPN 99
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVER 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI+V A
Sbjct: 77 LDGRVVDGREITVQFA 92
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+ D E+L A F FG + +++P D TG +GFA+VQ+ DP A +A
Sbjct: 308 LFVRNLSYDVSYEDLEAEFSSFGNLEQIHIPLDKTTGSSKGFAYVQYTDPDSAEKALVDR 367
Query: 124 NGKRFAGREISVVLAAESRK 143
+G+ F GR I ++ A R+
Sbjct: 368 DGRTFQGRLIHILPATAKRE 387
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P + +++RA F +G +R V +PK G RGFAF F EA A +
Sbjct: 704 VIIKNLPFEATKKDVRALFGEYGQLRSVRVPKKMDRG-ARGFAFADFTTVKEAQSAMDAL 762
Query: 124 NGKRFAGREISVVLAAE----SRKRPEEMRQR 151
GR + + A E + K E+M+Q+
Sbjct: 763 KDTHLLGRRLVLDFAEEDPEDAEKEIEKMQQK 794
>gi|340521462|gb|EGR51696.1| hypothetical protein TRIREDRAFT_74774 [Trichoderma reesei QM6a]
Length = 296
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 49 GGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFV 108
GG YG R + +L V N+ +ELR FERFG V V+L KD TG +GFAF+
Sbjct: 205 GGSKYGER--DDFATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFI 262
Query: 109 QFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 142
F D +A A M+G F + V A +++
Sbjct: 263 SFADHSDAVTACQKMDGFGFKHLILRVEFAKKAQ 296
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|308491929|ref|XP_003108155.1| CRE-RBD-1 protein [Caenorhabditis remanei]
gi|308249003|gb|EFO92955.1| CRE-RBD-1 protein [Caenorhabditis remanei]
Length = 888
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 55 RRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPY 114
R K G L +RN+P + ++L+ F+++G V +V + D TG +GFA V+FV P
Sbjct: 282 REKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFPE 341
Query: 115 EAAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
A A ++G F GR + ++ E R +P E
Sbjct: 342 AAVAAYSALDGYVFKGRMMHIIAGDEKRDKPTE 374
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYT--GEPRGFAFVQFVDPYEAAEAQH 121
L+V+N+P C ++LR FE++G + D L YT G+ RGFAFV F+D A+ A
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGKISDASLK---YTKEGKFRGFAFVGFLDEGSASNAIA 61
Query: 122 HMNGKRFAGREISV 135
N F + ++V
Sbjct: 62 KSNQTFFNSKRLTV 75
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 55 RRKEQNHGS-LLVRNIPLDCRPEELRAPFERFGVVRDVYLP-KDYYTGEPRGFAFVQFVD 112
++K+Q + LLVRN+P + +E+ FE FG V+ + +P K + RGF FV F+
Sbjct: 756 QKKDQGECTKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFIS 815
Query: 113 PYEAAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
EA A H+ G+R V+ A+ + EE+R++
Sbjct: 816 ADEARRAFDALVHSTHLYGRRL------VLEWAKEDETVEELREK 854
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|71043834|ref|NP_001020834.1| RNA-binding motif protein, X chromosome [Rattus norvegicus]
gi|81907907|sp|Q4V898.1|RBMX_RAT RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; AltName: Full=RNA-binding motif protein,
X chromosome retrogene; AltName: Full=RNA-binding motif
protein, X chromosome retrogene-like; Contains: RecName:
Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|66910650|gb|AAH97479.1| RNA binding motif protein, X-linked [Rattus norvegicus]
gi|149015799|gb|EDL75123.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_b [Rattus norvegicus]
Length = 390
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|402894334|ref|XP_003910320.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Papio
anubis]
Length = 394
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|261859212|dbj|BAI46128.1| RNA binding motif protein, X-linked-like 2 [synthetic construct]
Length = 392
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|358384661|gb|EHK22258.1| hypothetical protein TRIVIDRAFT_71507 [Trichoderma virens Gv29-8]
Length = 297
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 22 YSPPYYSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAP 81
Y PP R G G R GG YG R + +L V N+ ELR
Sbjct: 189 YVPPALRGDRGGAGERM----------GGSKYGER--DDFATLRVTNVSEMAEESELRDM 236
Query: 82 FERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
FERFG V V+L KD TG +GFAF+ F D +A A + M+G F
Sbjct: 237 FERFGRVTRVFLAKDRETGMAKGFAFISFADHSDAVTACNKMDGFGF 283
>gi|342320658|gb|EGU12597.1| Ribosomal processing [Rhodotorula glutinis ATCC 204091]
Length = 1132
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G LLVRN+ D +LRA F RFG + + LP + T +PRGFAFV FV A A
Sbjct: 420 GRLLVRNLGFDITTADLRAAFARFGPIHSITLPINPSTSKPRGFAFVYFVTRSHAESAMK 479
Query: 122 HMNGKRF 128
+NG R
Sbjct: 480 AVNGTRI 486
>gi|429851529|gb|ELA26715.1| peptidase family m20 m25 m40 protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1027
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 49 GGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFV 108
GG YG R + +L V N+ +ELR FERFG V V+L KD TG +GFAF+
Sbjct: 936 GGSKYGER--DDLATLRVTNVSELAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFI 993
Query: 109 QFVDPYEAAEAQHHMNGKRFAGREISVVLAAES 141
F D +A +A M+G F + V A ++
Sbjct: 994 SFADRSDAVKACAKMDGFGFKHLILRVEFAKKA 1026
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAIER 76
Query: 123 MNGKRFAGREISV 135
++G+ GR I V
Sbjct: 77 LDGRTVDGRNIVV 89
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G + DVY+P+D +T RGFAFV+F A +A
Sbjct: 5 SLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALDA 64
Query: 123 MNGKRFAGREISVVLA 138
++G GR++ V +A
Sbjct: 65 VDGVVLDGRKLRVQMA 80
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ + LR FE++G V DVY+P++ +T PRGFAFV+F +A +A+
Sbjct: 15 TLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRSDAQDAEAA 74
Query: 123 MNGKRFAGREISVVLAAESRK 143
M+ GRE+ V +A R+
Sbjct: 75 MDRAMLDGRELRVQMALYGRR 95
>gi|326924314|ref|XP_003208374.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Meleagris gallopavo]
Length = 385
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|125572147|gb|EAZ13662.1| hypothetical protein OsJ_03579 [Oryza sativa Japonica Group]
Length = 312
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 36/58 (62%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDP 113
RK +HG + V +PL ELRA F RFG V V PK+ TG RGFAFVQFV+P
Sbjct: 23 RKLLSHGKVFVGGVPLGTSESELRAQFSRFGTVAFVGAPKNKQTGAARGFAFVQFVNP 80
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F +FG + +++ P D T +P+GFAFV F+ P A +A
Sbjct: 402 DSGRLFVRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 461
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 462 YAEVDGQVFQGRMLHVL 478
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 826 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQD 885
Query: 116 AAEA------QHHMNGKRFAGR--EISVVLAAESRKRPE 146
A A H+ G+R + V L A RK E
Sbjct: 886 AKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAE 924
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +L +N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 585 ERSKTVILAKNLPAGTLAAELQEIFGRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 638
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 639 KAFRHLAYSKF 649
>gi|126325323|ref|XP_001367196.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Monodelphis domestica]
Length = 388
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + ++ + L A F ++G + +V L KD T + RGFAF+ F P +A +A
Sbjct: 8 GKLFVGGLNIETNEKALEAVFGKYGRIVEVLLMKDRETRKSRGFAFITFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKLLDGKSIKVEQATK 86
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F +P EA +A
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDA 62
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 63 MLAMNGKSLDGRQIRVDQAGKS 84
>gi|119331082|ref|NP_001073196.1| heterogeneous nuclear ribonucleoprotein G [Gallus gallus]
gi|53130710|emb|CAG31684.1| hypothetical protein RCJMB04_9j22 [Gallus gallus]
gi|169139272|gb|ACA48585.1| RNA binding motif protein, X-linked [Gallus gallus]
Length = 385
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P +E++A FE FG V+ V++P D T +G AFV F DP A A
Sbjct: 320 GRLFIRNLPFAANEDEIQAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAFR 379
Query: 122 HMNGKRFAGREISVV 136
+G F GR + ++
Sbjct: 380 AKDGSTFQGRLLHLL 394
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+L++N+P + +++R F G ++ V LPK + RGF FV++ EA A +
Sbjct: 730 ILIKNLPFEATKKDIRDLFASQGQLKSVRLPK-KFDNSTRGFGFVEYTTVREAQAAFEAL 788
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSPH 183
GR + + + ++ EE+ Q R + S + G + R R+ + S
Sbjct: 789 KHTHLLGRHLVLQWSHAAKDSREEV-QMQRDKTKSGFVGAAAGDEVRADKRAKIKLNSAQ 847
Query: 184 HPQGSRSRYRSRS 196
R R+R
Sbjct: 848 ISDAVRKARRARD 860
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
MNGK GR+I V A +S E R R +RGGSS
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS----SENRSRG-YRGGSS 98
>gi|449267951|gb|EMC78842.1| Heterogeneous nuclear ribonucleoprotein G [Columba livia]
Length = 385
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAQDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++++T PRGFAFV+F + +A +A+
Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRRDAEDAEDA 74
Query: 123 MNGKRFAGREI 133
M+G GRE+
Sbjct: 75 MDGAELDGREL 85
>gi|354475287|ref|XP_003499861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Cricetulus griseus]
Length = 289
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|6755296|ref|NP_035382.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|262231769|ref|NP_001160095.1| RNA-binding motif protein, X chromosome [Mus musculus]
gi|81917893|sp|Q9WV02.1|RBMX_MOUSE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|5579011|emb|CAB51362.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|13277600|gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus musculus]
gi|74149379|dbj|BAE22448.1| unnamed protein product [Mus musculus]
gi|148710228|gb|EDL42174.1| RNA binding motif protein, X chromosome, isoform CRA_e [Mus
musculus]
Length = 391
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N+ ++ V+NI L+ EE R F ++G V L +D G+ RGF FV F AA+A
Sbjct: 243 NYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQ-EGKSRGFGFVNFSTHDSAAKA 301
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+E+ V A + +R EE+R+ SY R+ +Y+ +L
Sbjct: 302 VEELNGKEFRGQELYVGRAQKKHEREEELRK--------SYEAARAEKANKYQGVNLYIK 353
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R + P+
Sbjct: 354 NLADDIDDDKLRQMFSEFGPI 374
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
MNGK GR+I V A +S E R R +RGGS+
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS----SENRSRG-YRGGST 98
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P C EEL+ F + G + +V P D T +P+G+AFV ++ P A A
Sbjct: 388 GRLFIRNLPYTCTEEELQDLFSKHGPLAEVVFPIDNLTKKPKGYAFVSYMIPENAVTALA 447
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYR-SRSLSRSR 180
++G F GR + ++ P +++ + S++ GP SS Y R + +++ + S
Sbjct: 448 QLDGHIFQGRMLHLL--------PSTLKKE---KADSAHSGPGSSSYKRQKDAKNKASST 496
Query: 181 SPHH 184
S H+
Sbjct: 497 SSHN 500
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY---TGEPRGFAFVQFVDP 113
++Q +LVRN+P E+R F FG ++ V LPK TG RGF FV F+
Sbjct: 782 RKQTSSKILVRNVPFQATVREIRELFCTFGELKTVRLPKKASGTGTGPHRGFGFVDFLTK 841
Query: 114 YEAAEA------QHHMNGKRF 128
+A +A H+ G+R
Sbjct: 842 QDAKKAFSALCHSTHLYGRRL 862
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G + VRN+P EEL + FE++G + +V +P D +P+GFA + FV P A +A
Sbjct: 352 GRIFVRNLPYVVSEEELTSLFEKYGPIAEVSMPIDPILRQPKGFAVITFVMPEHAVKAYT 411
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFR 155
++G F GR + +L A+ K EE+ + F+
Sbjct: 412 ELDGTAFCGRMMH-ILPAKMEKLEEEIDEDLPFK 444
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG--EPRGFAFVQFVDPYEA 116
QN +L+RN+P +EL F FG ++ + LP+ G + RGFA FVD Y
Sbjct: 761 QNGTKILIRNVPFQANRKELHEIFRAFGEIKTLRLPQKLTVGSEQHRGFA---FVDYYSK 817
Query: 117 AEAQ 120
A+A+
Sbjct: 818 ADAK 821
>gi|224097264|ref|XP_002190045.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 1
[Taeniopygia guttata]
Length = 377
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|449498359|ref|XP_004175818.1| PREDICTED: RNA-binding motif protein, X chromosome isoform 2
[Taeniopygia guttata]
Length = 385
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|291401898|ref|XP_002717345.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
gi|291408303|ref|XP_002720376.1| PREDICTED: RNA binding motif protein, X-linked [Oryctolagus
cuniculus]
Length = 391
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|75076898|sp|Q4R813.1|HNRGT_MACFA RecName: Full=RNA-binding motif protein, X-linked-like-2; AltName:
Full=Testis-specific heterogeneous nuclear
ribonucleoprotein G-T; Short=hnRNP G-T
gi|67968804|dbj|BAE00759.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|426257491|ref|XP_004022360.1| PREDICTED: RNA-binding motif protein, X chromosome [Ovis aries]
Length = 391
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|355757746|gb|EHH61271.1| hypothetical protein EGM_19240 [Macaca fascicularis]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|291400889|ref|XP_002716811.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|395546030|ref|XP_003774897.1| PREDICTED: RNA-binding motif protein, X chromosome [Sarcophilus
harrisii]
Length = 413
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + + + L A F ++G + +V L KD T + RGFAF+ F P +A +A
Sbjct: 27 GKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAAR 86
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 87 DMNGKLLDGKSIKVEQATK 105
>gi|114052629|ref|NP_001040075.1| RNA-binding motif protein, X chromosome [Bos taurus]
gi|119907483|ref|XP_001250252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Bos
taurus]
gi|109892459|sp|Q29RT0.1|RBMX_BOVIN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|88954147|gb|AAI14041.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Bos
taurus]
gi|296480068|tpg|DAA22183.1| TPA: RNA binding motif protein, X-linked [Bos taurus]
Length = 396
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAF+ F P +A A
Sbjct: 8 GKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|361131014|gb|EHL02744.1| putative Eukaryotic translation initiation factor 3 subunit G
[Glarea lozoyensis 74030]
Length = 327
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 27 YSPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
Y PP GG + R G GG Y R + +L V N+ +ELR FERFG
Sbjct: 219 YVPPHMRNGGASSAGDRMG----GGKYER---DDLATLRVTNVSEMAEEQELRDMFERFG 271
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
V V+L KD TG +GFAF+ F + +AA+A M+G F
Sbjct: 272 RVTRVFLAKDRETGMAKGFAFISFQERTDAAKACEKMDGYGF 313
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAG 130
A M+G G
Sbjct: 71 AMDAMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNGKRFAG 130
A M+G G
Sbjct: 71 AMDAMDGAVLDG 82
>gi|301769089|ref|XP_002919961.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like
[Ailuropoda melanoleuca]
gi|281352732|gb|EFB28316.1| hypothetical protein PANDA_008640 [Ailuropoda melanoleuca]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|4104336|gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + + + L A F ++G + +V L KD T + RGFAF+ F P +A +A
Sbjct: 8 GKLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKLLDGKSIKVEQATK 86
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TG+ RGFAFV++ EA +A
Sbjct: 9 SLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHADEAQKAIER 68
Query: 123 MNGKRFAGREISVVLA 138
++GK GR I V A
Sbjct: 69 LDGKNVDGRNIVVQFA 84
>gi|125527839|gb|EAY75953.1| hypothetical protein OsI_03870 [Oryza sativa Indica Group]
Length = 312
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 36/58 (62%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDP 113
RK +HG + V +PL ELRA F RFG V V PK+ TG RGFAFVQFV+P
Sbjct: 23 RKLLSHGKVFVGGVPLGTSESELRAHFSRFGTVAFVGAPKNKQTGAARGFAFVQFVNP 80
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA---- 119
+ V +P+ ++L+ F +FG V + D T PRGF F+QF A A
Sbjct: 126 IFVGGLPVSATEKKLKEYFSKFGEVNHAIVVTDLNTKMPRGFGFIQFASEESTARALKKD 185
Query: 120 QHHMNGKRFAGREISVVL 137
+H + G+ E+S+ +
Sbjct: 186 RHFLCGQWV---EVSLAM 200
>gi|355715855|gb|AES05424.1| RNA binding motif protein, X-linked [Mustela putorius furo]
Length = 392
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 9 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 68
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 69 DMNGKSLDGKAIKVEQATK 87
>gi|327286671|ref|XP_003228053.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Anolis carolinensis]
Length = 384
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|56699409|ref|NP_002130.2| RNA-binding motif protein, X chromosome isoform 1 [Homo sapiens]
gi|206725512|ref|NP_001128678.1| RNA-binding motif protein, X chromosome [Pan troglodytes]
gi|74008547|ref|XP_866434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G isoform 6
[Canis lupus familiaris]
gi|149755726|ref|XP_001489601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Equus
caballus]
gi|397482297|ref|XP_003812367.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Pan
paniscus]
gi|410989483|ref|XP_004000991.1| PREDICTED: RNA-binding motif protein, X chromosome [Felis catus]
gi|23503093|sp|P38159.3|RBMX_HUMAN RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Glycoprotein p43; AltName: Full=Heterogeneous
nuclear ribonucleoprotein G; Short=hnRNP G; Contains:
RecName: Full=RNA-binding motif protein, X chromosome,
N-terminally processed
gi|160395526|sp|A5A6M3.1|RBMX_PANTR RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|13938569|gb|AAH07435.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|14279350|gb|AAK58567.1| RBMX [Homo sapiens]
gi|16306856|gb|AAH06550.1| RNA binding motif protein, X-linked [Homo sapiens]
gi|39545947|gb|AAR28036.1| heterogeneous nuclear ribonucleoprotein G [Homo sapiens]
gi|119608859|gb|EAW88453.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608860|gb|EAW88454.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608861|gb|EAW88455.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|119608863|gb|EAW88457.1| RNA binding motif protein, X-linked, isoform CRA_a [Homo sapiens]
gi|123993071|gb|ABM84137.1| RNA binding motif protein, X-linked [synthetic construct]
gi|124000061|gb|ABM87539.1| RNA binding motif protein, X-linked [synthetic construct]
gi|146741480|dbj|BAF62396.1| RNA binding motif protein, X-linked [Pan troglodytes verus]
gi|410266422|gb|JAA21177.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266426|gb|JAA21179.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266428|gb|JAA21180.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266430|gb|JAA21181.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266432|gb|JAA21182.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266434|gb|JAA21183.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410266436|gb|JAA21184.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348962|gb|JAA41085.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348964|gb|JAA41086.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348966|gb|JAA41087.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348968|gb|JAA41088.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348970|gb|JAA41089.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348972|gb|JAA41090.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348974|gb|JAA41091.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410348976|gb|JAA41092.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNG 125
M+G
Sbjct: 75 MDG 77
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE R FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 237 NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 297 VEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
>gi|402911572|ref|XP_003918396.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
gi|75076694|sp|Q4R7F0.1|RBMX_MACFA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G; Contains: RecName: Full=RNA-binding motif
protein, X chromosome, N-terminally processed
gi|67969238|dbj|BAE00972.1| unnamed protein product [Macaca fascicularis]
gi|380813174|gb|AFE78461.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813176|gb|AFE78462.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813178|gb|AFE78463.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813180|gb|AFE78464.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|380813182|gb|AFE78465.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383411873|gb|AFH29150.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418689|gb|AFH32558.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418691|gb|AFH32559.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418693|gb|AFH32560.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418695|gb|AFH32561.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418697|gb|AFH32562.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383418699|gb|AFH32563.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947302|gb|AFI37256.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947304|gb|AFI37257.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947306|gb|AFI37258.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947308|gb|AFI37259.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947310|gb|AFI37260.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947312|gb|AFI37261.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|384947314|gb|AFI37262.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE R FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 237 NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 297 VEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE R FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 253 NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA 312
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 313 VEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 358
>gi|346716298|ref|NP_001231025.1| heterogeneous nuclear ribonucleoprotein G [Sus scrofa]
Length = 390
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|35505506|gb|AAH57796.1| RNA binding motif protein, X-linked-like 2 [Homo sapiens]
Length = 392
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V N+ D ++LR FE FG ++ + L D TG +GFAFVQ+ P +A +A H
Sbjct: 273 LYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHC 332
Query: 124 NGKRFAGREISVVLAAE 140
NG AGR++ V + ++
Sbjct: 333 NGMELAGRQLKVGIVSD 349
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ N+P+ EL F + G V D+ L D + + +GF +++++D A H
Sbjct: 170 TVFASNLPIRASESELFEFFGKAGKVHDIRLITDRNSRKSKGFGYIEYLDKSSVPLALHQ 229
Query: 123 MNGKRFAGREISVVLAAESRKR 144
+NG + G+ + V + + R
Sbjct: 230 LNGTQCKGQTVLVQITQAEKNR 251
>gi|410227798|gb|JAA11118.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227802|gb|JAA11120.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227804|gb|JAA11121.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227806|gb|JAA11122.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227808|gb|JAA11123.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227810|gb|JAA11124.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410227812|gb|JAA11125.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE R+ FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 237 NFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 297 VEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 53 YGRRKEQ------NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
+G R+E+ + G L V + D + L F ++G + +V + KD T RGF
Sbjct: 3 WGTREEEQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFG 62
Query: 107 FVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAES 141
FV F + +A +A MNGK GR+I V A +S
Sbjct: 63 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 97
>gi|410308290|gb|JAA32745.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308292|gb|JAA32746.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308294|gb|JAA32747.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308296|gb|JAA32748.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308298|gb|JAA32749.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308300|gb|JAA32750.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308302|gb|JAA32751.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
gi|410308304|gb|JAA32752.1| RNA binding motif protein, X-linked-like 1 [Pan troglodytes]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|344297709|ref|XP_003420539.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Loxodonta
africana]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+++G V DV++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GREI V A
Sbjct: 77 LDGRVVDGREIMVQFA 92
>gi|3256007|emb|CAA80599.1| hnRNP G protein [Homo sapiens]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|403256025|ref|XP_003920702.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Saimiri
boliviensis boliviensis]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE R FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 237 NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 297 VEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
>gi|83699420|ref|NP_033059.2| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|355390287|ref|NP_001239018.1| RNA binding motif protein, X-linked-like-1 [Mus musculus]
gi|81916088|sp|Q91VM5.1|RMXL1_MOUSE RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
AltName: Full=RNA binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA binding motif
protein, X-linked-like-1, N-terminally processed
gi|15030328|gb|AAH11441.1| Rbmxrt protein [Mus musculus]
gi|26334797|dbj|BAC31099.1| unnamed protein product [Mus musculus]
gi|58476937|gb|AAH89350.1| RNA binding motif protein, X chromosome retrogene [Mus musculus]
Length = 388
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|148678911|gb|EDL10858.1| mCG7984 [Mus musculus]
Length = 388
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P EEL F ++G + +++ P D T +P+GFAF+ F+ P A +A
Sbjct: 400 DSGRLFVRNLPYTSTEEELEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKA 459
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 460 YAEVDGQVFQGRMLHVL 476
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 820 RKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGAHRGFGFVDFLTKQD 879
Query: 116 AAEA------QHHMNGKR----FAGREISV 135
A A H+ G+R +A E++V
Sbjct: 880 AKRAFNALCHSTHLYGRRLVLEWADSEVTV 909
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 583 ERSKTVMLVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 636
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 637 KAFRHLAYSKF 647
>gi|297711157|ref|XP_002832216.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Pongo abelii]
Length = 438
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 55 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 114
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 115 DMNGKSLDGKAIKVEQATK 133
>gi|285012962|ref|NP_001165510.1| heterogeneous nuclear ribonucleoprotein G [Bos taurus]
gi|348557903|ref|XP_003464758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|284080621|gb|ADB77884.1| Rbmx [Bos taurus]
gi|296471213|tpg|DAA13328.1| TPA: RNA binding motif protein, X-linked isoform 1 [Bos taurus]
gi|440895247|gb|ELR47495.1| Heterogeneous nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|65301143|ref|NP_083936.1| RNA-binding motif protein, X-linked-like-2 [Mus musculus]
gi|12838734|dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L F ++G + +V L KD T + RGFAFV F +P +A A
Sbjct: 8 GKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 60 NHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
NH + L V NI +L+ FE FG + V L KD TG RG+ FVQF DP +
Sbjct: 271 NHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQ 329
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGR 170
A EA MNG AGR I V L + + PE QR + +G S S + G+
Sbjct: 330 AREALEKMNGFDLAGRAIRVGLGND-KFTPESNAQRMQSQGASQQNFQGSMFSGQ 383
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ ++ V+ + R +EL A FE+ G V++ + KD +G +G +V+F + A
Sbjct: 174 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEESVA 233
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKR 144
A + G++ G I L + R
Sbjct: 234 PA-IQLTGQKLLGIPIIAQLTEAEKNR 259
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 31 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 90
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 91 MMAMNGKSVDGRQIRVDQAGKS 112
>gi|315041096|ref|XP_003169925.1| eukaryotic translation initiation factor 3 subunit G [Arthroderma
gypseum CBS 118893]
gi|311345887|gb|EFR05090.1| eukaryotic translation initiation factor 3 subunit G [Arthroderma
gypseum CBS 118893]
Length = 293
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 35 GGRGRS-----PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
GG G+S PP GG G G G+ + + +L V N+ +ELR FERFG
Sbjct: 175 GGLGQSGGSYVPPAMRKGGAGAGDKMGGKYERDDLATLRVTNVSELAEEQELRDMFERFG 234
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 235 RVTRVFLAKDRETNMAKGFAFISFADRSDAARACDKMDG 273
>gi|291049789|ref|NP_001166928.1| RNA binding motif protein [Monodelphis domestica]
gi|284080635|gb|ADB77891.1| RNA binding motif protein [Monodelphis domestica]
Length = 392
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKGLEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKSIKVEQATK 86
>gi|343959058|dbj|BAK63384.1| heterogeneous nuclear ribonucleoprotein G [Pan troglodytes]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI + ++L+A FE FG + V L KD G RG+ FVQF D +A EA M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDD-NGRSRGYGFVQFRDATQAREALEKM 337
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGG 162
NG AGR I V L + HRF G +++ G
Sbjct: 338 NGFDLAGRPIRVGLGNDKFTPESTANLMHRFSGQNNFQG 376
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
MNGK GR+I V A +S E R R +RGGS+
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS----SENRSRG-YRGGST 98
>gi|390474384|ref|XP_002757703.2| PREDICTED: RNA-binding motif protein, X chromosome-like, partial
[Callithrix jacchus]
Length = 391
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|354477196|ref|XP_003500808.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Cricetulus griseus]
gi|344244124|gb|EGW00228.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 388
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F +P +A +A
Sbjct: 5 DEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDA 64
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 65 MEAMNGKSVDGRQIRVDQAGKS 86
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2; Short=xCIRP2;
AltName: Full=Glycine-rich RNA-binding protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L + + D E L F ++G + +V + KD T RGF FV F +P +A +A
Sbjct: 3 DEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDA 62
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 63 MMAMNGKAVDGRQIRVDQAGKS 84
>gi|373953846|ref|ZP_09613806.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
gi|373890446|gb|EHQ26343.1| RNP-1 like RNA-binding protein [Mucilaginibacter paludis DSM 18603]
Length = 107
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ + +P EEL A F FG V+ + + KD TG+ +GF FV+ + EA EA +M
Sbjct: 3 IFIAGLPFQVEEEELTAVFGDFGHVKSLRIVKDRETGQSKGFGFVEMTNDDEAKEAIKNM 62
Query: 124 NGKRFAGREISVVLAAESRKRP 145
NG + GR ISV AE+ +P
Sbjct: 63 NGADYYGRRISV---AEAEDKP 81
>gi|402911185|ref|XP_003918220.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Papio
anubis]
Length = 719
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V + L + L+A F ++G + +V L KD T + RGFAFV F P +A A +
Sbjct: 10 LFVGGLNLKTDEKALKAEFVKYGRIINVLLMKDRETNKSRGFAFVTFESPADAEAAARDL 69
Query: 124 NGKRFAGREISVVLAAE 140
NGK G+ I V A +
Sbjct: 70 NGKYLDGKAIKVAGAIK 86
>gi|149015800|gb|EDL75124.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_c [Rattus norvegicus]
Length = 289
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|5579009|emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
gi|74228065|dbj|BAE37998.1| unnamed protein product [Mus musculus]
gi|148710226|gb|EDL42172.1| RNA binding motif protein, X chromosome, isoform CRA_c [Mus
musculus]
Length = 289
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|327286673|ref|XP_003228054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Anolis carolinensis]
Length = 374
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ D EE R FE++G + L +D TG+ RGF FV F D A+ A
Sbjct: 237 NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N G+++ V A + +R EE+R+++ R S Y G
Sbjct: 297 VEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQG 342
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
+EL+ F FG + DV + +D YTG+ +GF F+QF EA EA MNG AGREI V
Sbjct: 603 QELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQFHKASEAIEALTVMNGMEVAGREIKV 662
Query: 136 VLAAESR 142
A +S+
Sbjct: 663 GYAQDSK 669
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL + N+ P +LR F+R+G + DV++P+D Y+ + +GF FV+F + +A A
Sbjct: 19 SLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 78
Query: 123 MNGKRFAGREISVVLAAESR 142
+GK GRE+ V LA R
Sbjct: 79 TDGKLVDGRELRVTLAKYDR 98
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI ++L+ FE FG + V L KD TG RG+ FVQF DP +A EA M
Sbjct: 270 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEKM 328
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYY 168
NG AGR I V L + RF+G + GG + S +
Sbjct: 329 NGFDLAGRPIRVGLGNDKFTPESTANLLQRFQGQNHSGGSQGSAF 373
>gi|395860828|ref|XP_003802706.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Otolemur
garnettii]
Length = 391
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAF+ F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|357017693|gb|AET50875.1| hypothetical protein [Eimeria tenella]
Length = 415
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%)
Query: 49 GGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFV 108
G G R++ + +L + N+PL C ELR FE G V+D + + + E RGFAF+
Sbjct: 93 GSGARPRQRGGDTDTLYISNLPLRCGALELRRIFEEVGEVKDCRIVNNPVSRESRGFAFL 152
Query: 109 QFVDPYEAAEAQHHMNGKRFAG 130
FVDP AA A H + K G
Sbjct: 153 SFVDPSHAAVAIEHFDNKTIFG 174
>gi|296478475|tpg|DAA20590.1| TPA: RNA binding motif protein 19 [Bos taurus]
Length = 825
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F R+G V +++ P D T +P+GFAFV F+ P A +A
Sbjct: 361 DSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 420
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 421 YAEVDGQVFQGRMLHVL 437
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 544 ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 597
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 598 KAFRHLAYSKF 608
>gi|417410380|gb|JAA51664.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 398
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 9 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 68
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 69 DMNGKSLDGKAIKVEQATK 87
>gi|356517718|ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
Length = 273
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V NI +L F FG V V + KD +T RG AFVQFV ++A +A
Sbjct: 64 TLYVSNIDYSLTNSDLHTLFSTFGRVARVTVLKDRHTRLSRGVAFVQFVSRHDAHDAAAQ 123
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQR 151
M+GK GR ++ +AA++ + PE +R+R
Sbjct: 124 MDGKVLNGRTLAASIAADNGRAPEFIRKR 152
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI + ++L+A FE FG + V L KD G RG+ FVQF D +A EA M
Sbjct: 275 LYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDD-NGRSRGYGFVQFRDATQAREALEKM 333
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGG 162
NG AGR I V L + HRF G +++ G
Sbjct: 334 NGFDLAGRPIRVGLGNDKFTPESTANLMHRFSGQNNFQG 372
>gi|225681498|gb|EEH19782.1| eukaryotic translation initiation factor 3 subunit p42/p44
[Paracoccidioides brasiliensis Pb03]
Length = 323
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 33 GYGGRGRSPPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
G GG PP GG G G+ + + +L V N+ +E+R FERFG V
Sbjct: 211 GAGGNSYVPPHLRKGGAAAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVT 270
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 271 RVFLAKDRETNMAKGFAFISFQDRSDAARACEKMDG 306
>gi|380811822|gb|AFE77786.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
gi|383417591|gb|AFH32009.1| heterogeneous nuclear ribonucleoprotein G isoform 1 [Macaca
mulatta]
Length = 289
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|296236539|ref|XP_002763369.1| PREDICTED: RNA-binding motif protein, X chromosome [Callithrix
jacchus]
Length = 289
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|297824993|ref|XP_002880379.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326218|gb|EFH56638.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 51 GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
GG G + ++ L++RN+P +P +++ F G V DV++PK++ TG P+GFAFV+F
Sbjct: 304 GGEGSKAQK--WKLIIRNLPFQAKPSDIKEVFSAVGFVWDVFIPKNFETGLPKGFAFVKF 361
Query: 111 VDPYEAAEAQHHMNGKRFAGREISV 135
+A A NG F R I+V
Sbjct: 362 TCKKDAENAIQMFNGHMFGKRPIAV 386
Score = 44.3 bits (103), Expect = 0.059, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 3/104 (2%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
+ Q+ ++ V +P +L F G VR YL + + E RGFAFV F P +
Sbjct: 14 KSPQSATTVCVSGLPYSITNAQLEEAFSEVGPVRRCYLITNKGSNEHRGFAFVTFALPED 73
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
A NG F GR I+V ++ RP +R + G S
Sbjct: 74 VNRAIELKNGSTFGGRRITV---KQATNRPSLKERRTKAVQGIS 114
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 12/111 (10%)
Query: 55 RRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPY 114
+ E +L +RNIP D EE++ F FG V ++L + T P G AF++F
Sbjct: 537 QENEHFERTLFIRNIPFDVTKEEVKQKFAVFGEVESLFLVLNKVTKRPEGTAFLKFKKAD 596
Query: 115 EAAEAQHHMN-----GKRFAGREISVVLAAESR-------KRPEEMRQRHR 153
+ A N G GR+++V+ A + K+ EE HR
Sbjct: 597 ASVAAISAANTASGVGVLLKGRQLNVMRAVGKKAAHDIELKKTEEKNVDHR 647
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|351715732|gb|EHB18651.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 356
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D +GE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFAFVRYKHVDEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G GR+I+V A
Sbjct: 77 LDGMTIDGRQIAVQFA 92
>gi|296217449|ref|XP_002755014.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Callithrix
jacchus]
Length = 394
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKTLDGKAIKVAQATK 86
>gi|47086837|ref|NP_997763.1| RNA-binding motif protein, X chromosome [Danio rerio]
gi|82241461|sp|Q7ZWA3.1|RBMX_DANRE RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|29436819|gb|AAH49509.1| RNA binding motif protein, X-linked [Danio rerio]
gi|47846286|emb|CAG30733.1| RNA binding motif protein [Danio rerio]
gi|48735158|gb|AAH71326.1| RNA binding motif protein, X-linked [Danio rerio]
Length = 379
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F +FG + +V L KD T + RGFAFV + +P +A +A
Sbjct: 8 GKLFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKPLDGKPIKVEQATK 86
>gi|226288637|gb|EEH44149.1| eukaryotic translation initiation factor 3 subunit G
[Paracoccidioides brasiliensis Pb18]
Length = 288
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 33 GYGGRGRSPPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
G GG PP GG G G+ + + +L V N+ +E+R FERFG V
Sbjct: 176 GAGGNSYVPPHLRKGGAAAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVT 235
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 236 RVFLAKDRETNMAKGFAFISFQDRSDAARACEKMDG 271
>gi|156045113|ref|XP_001589112.1| hypothetical protein SS1G_09745 [Sclerotinia sclerotiorum 1980]
gi|238686685|sp|A7EWN6.1|EIF3G_SCLS1 RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|154694140|gb|EDN93878.1| hypothetical protein SS1G_09745 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 288
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 36 GRGRS---PPRRGYGGGGGGY----GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVV 88
G G+S PP GG GG G+ + + +L V N+ +ELR FERFG V
Sbjct: 175 GAGKSSYVPPHLRNGGAAGGERMGGGKFERDDLATLRVTNVSEMAEEQELRDMFERFGRV 234
Query: 89 RDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD TG +GFAF+ F + +AA+A M+G
Sbjct: 235 TRVFLAKDRETGLAKGFAFISFQERSDAAKACEKMDG 271
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRNI EE R F+++G + +V++ D TG+ +GF +VQF P +A EA
Sbjct: 349 GRLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTRTGKSKGFVYVQFKQPKDAVEAYK 408
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
++ + F GR + ++ P E ++ HR
Sbjct: 409 SLDKQIFQGRLLHIL--------PAEAKKDHRL 433
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 48 GGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF 107
GG G K ++++N+P + +++ F FG ++ V +PK + RGFAF
Sbjct: 738 GGQSKGGASKTNKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKK-FDKSARGFAF 796
Query: 108 VQFVDPYEAAEAQHHMNGKRFAGREISV 135
V+FV EA A + G GR + +
Sbjct: 797 VEFVLLKEAENAMDQLEGVHLLGRRLVM 824
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI ++ EE F ++G + L KD G+P+GF FV FVD AA+A
Sbjct: 229 NFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDA-EGKPKGFGFVNFVDHNAAAKA 287
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+NGK F + + V A + +R EE+++++
Sbjct: 288 VEELNGKEFKSQALYVGRAQKKYERAEELKKQYE 321
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L ++N+ E+L+ F +G + + +D G +GF FV F P EA +A
Sbjct: 335 NLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQ-EGNSKGFGFVCFSSPEEATKAMTE 393
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRG 156
N + AG+ + V +A R ++ Q+ + R
Sbjct: 394 KNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARN 427
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G++ ++N+ + L F FG V + D G RGF FV F + +A +A
Sbjct: 138 GNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDE-NGNSRGFGFVHFKEESDAKDAIE 196
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQ 150
+NG G E+ V + + R ++ +
Sbjct: 197 AVNGMLMNGLEVYVAMHVPKKDRISKLEE 225
>gi|71012413|ref|XP_758493.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
gi|74702789|sp|Q4PC17.1|MRD1_USTMA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46098151|gb|EAK83384.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
Length = 858
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P +E+ A FE FG V+ V++P D T +G AFV F DP A A
Sbjct: 314 GRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYR 373
Query: 122 HMNGKRFAGREISVV-------LAAESRKRPEEMRQ 150
+G F GR + ++ LA K+ ++Q
Sbjct: 374 AKDGSTFQGRLLHLLPAVNKDALAETGSKKTATLKQ 409
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+L++N+P + ++R F G ++ V LPK + RGF FV++ EA A +
Sbjct: 721 ILIKNLPFEATKRDIRDLFSSQGQLKSVRLPK-KFDNTTRGFGFVEYSTVREAQSAMEAL 779
Query: 124 NGKRFAGREISVV---LAAESRKRPEEMRQRHR 153
GR + + LA+ ++++ + R + +
Sbjct: 780 KHTHLLGRHLVLQWSHLASSTQQQVDMQRSKTK 812
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNGKRFAGREISVVLAAES 141
D +A +A M+G G + AA S
Sbjct: 63 HDKRDAEDAMDAMDGA-VPGLAADLATAARS 92
>gi|149015798|gb|EDL75122.1| similar to heterogeneous nuclear ribonucleoprotein G - human,
isoform CRA_a [Rattus norvegicus]
Length = 306
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|391347243|ref|XP_003747874.1| PREDICTED: cleavage stimulation factor subunit 2-like [Metaseiulus
occidentalis]
Length = 422
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ S+ V NIP D E+L+ FE G V + L D TG+P+G+ F +F D A
Sbjct: 14 EKSACSVFVGNIPYDATEEQLKTIFEEVGPVVNFRLVYDRETGKPKGYGFCEFKDQETAM 73
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGP 163
A ++N GR + V AA R + EE++ + + YGGP
Sbjct: 74 SAMRNLNSFEIGGRALRVDHAASERNK-EELKALY-----AQYGGP 113
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI D +E R FE+FG V L +D G+PRGF FV F A +A
Sbjct: 238 NFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQ-EGKPRGFGFVNFTTHEAAFKA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+E+ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 297 VEDLNGKDFRGQELYVGRAQKKHEREEELRK--------SYEAARLEKANKYQGVNLYIK 348
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R + P+
Sbjct: 349 NLDDDVDDEKLRQMFAEFGPI 369
>gi|53792441|dbj|BAD53349.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 407
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 48 GGGGGYGR-RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
GG G R RK +HG + V +PL ELRA F RFG V V PK+ TG RGFA
Sbjct: 14 GGEGEIVRGRKLLSHGKVFVGGVPLGTSESELRAHFSRFGTVAFVGAPKNKQTGAARGFA 73
Query: 107 FVQFVDP 113
FVQFV+P
Sbjct: 74 FVQFVNP 80
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 39 RSPPR---RGYGGGGGGYGRRKEQ--NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYL 93
+ PP+ + + G G +E + G L VRN+P E+L F R+G + +++
Sbjct: 378 KGPPKNSTKAWQGRTLGENEEEEDLADSGRLFVRNLPYTSSEEDLEKIFSRYGPLSELHY 437
Query: 94 PKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVV 136
P D T +P+GFAFV F+ P A +A ++G+ F GR + V+
Sbjct: 438 PIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVL 480
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 829 RKQTTSKILVRNIPFQADRREIRELFSTFGELKTVRLPKKMAGTGTHRGFGFVDFLSKQD 888
Query: 116 AAEA------QHHMNGKR----FAGREISVVLAAESRKRPE 146
A A H+ G+R +A E+S L A RK E
Sbjct: 889 AKRAFNALCHSTHLYGRRLVLEWADSEVS--LQALRRKTAE 927
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F +FG + V LP+ T A V+F++P EA
Sbjct: 587 ERSKTVMLVKNLPAGTLAAELQEIFGQFGSLGRVLLPEGGVT------AIVEFLEPLEAR 640
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 641 KAFRHLAYSKF 651
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L + + + +LR F+++G +R+ ++ D +G RGF FV F DP +A +A M
Sbjct: 16 LFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQDAIDQM 75
Query: 124 NGKRFAGREISVVLAAESRKR 144
GK GR I V A + R
Sbjct: 76 TGKELCGRSIRVSHAVKQTDR 96
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P E+L F ++G + +++ P D T +P+GFAF+ ++ P A +A
Sbjct: 78 GRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYA 137
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEM 148
M+G+ F GR + ++ + + + E++
Sbjct: 138 EMDGQVFQGRMMHLLPSTIKKLKIEDI 164
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 490 KKQKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQD 549
Query: 116 AAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A +A H+ G+R V+ A++ + E +R+R
Sbjct: 550 AKKAFNALCHSTHLYGRRL------VLEWADTEETVEALRRR 585
>gi|351705539|gb|EHB08458.1| Heterogeneous nuclear ribonucleoprotein G [Heterocephalus glaber]
Length = 326
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFA V F P +A EA
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIMEVLLMKDQETNKSRGFAIVTFESPADAKEATR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|148710225|gb|EDL42171.1| RNA binding motif protein, X chromosome, isoform CRA_b [Mus
musculus]
Length = 301
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L +RN+P E+L F +FG + +++ P D T +P+GFAFV F+ P A A
Sbjct: 402 DSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRA 461
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 462 YAEVDGQVFQGRMLHVL 478
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 808 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD 867
Query: 116 AAEA------QHHMNGKR----FAGREISV 135
A A H+ G+R +A E+S+
Sbjct: 868 AKRAFQALCHSTHLYGRRLVLEWADSEVSL 897
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+FV+P EA
Sbjct: 585 ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFVEPLEAR 638
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 639 KAFRHLAYSKF 649
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
MNGK GR+I V A +S E R R +RGGS+
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS----SENRSRG-YRGGSA 98
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|403300126|ref|XP_003940808.1| PREDICTED: RNA binding motif protein, X-linked-like-1-like, partial
[Saimiri boliviensis boliviensis]
Length = 268
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus glaber]
Length = 167
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 60.8 bits (146), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 50/86 (58%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C ++L F ++G + +++ P D T +P+GFAFV F+ A +A
Sbjct: 386 GRLFVRNLPYSCTEDDLDKLFSKYGPISEIHFPIDSLTKKPKGFAFVTFLITEHAVKAYA 445
Query: 122 HMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ +A ++ E
Sbjct: 446 EVDGQIFQGRLLHVLPSAAKKEEVNE 471
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRN+P E+R F FG ++ V LPK TG RGF FV FV +
Sbjct: 792 KKQQSSKILVRNVPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQD 851
Query: 116 AAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A A H+ G+R V+ AE+ E +R++
Sbjct: 852 AKRAFSALCHSTHLYGRRL------VLEWAETEDSVETLRRK 887
>gi|213407694|ref|XP_002174618.1| translation initiation factor eIF3g [Schizosaccharomyces japonicus
yFS275]
gi|212002665|gb|EEB08325.1| translation initiation factor eIF3g [Schizosaccharomyces japonicus
yFS275]
Length = 281
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 49 GGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFV 108
GG +R+ + +L V N+ D R +ELR F RFG ++ V+L KD TG +GFAFV
Sbjct: 188 GGDSLFKRERDDSATLRVTNLSDDTREDELRDLFRRFGGIQRVFLAKDKETGRAKGFAFV 247
Query: 109 QFVDPYEAAEAQHHMNG 125
+ D A +A+ ++G
Sbjct: 248 SYYDRESAVKARDRLDG 264
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L A F ++G + +V L KD T + RGFAF+ F P +A A
Sbjct: 8 GKLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix jacchus]
Length = 172
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In Cytotoxic
Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 48 GGGGGYGRRKEQ-NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
G G G++K+ NH + V ++ + E+++A F FG + D + KD TG+ +G+
Sbjct: 1 GSSGSSGQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYG 60
Query: 107 FVQFVDPYEAAEAQHHMNGKRFAGREI 133
FV F + ++A A M G+ GR+I
Sbjct: 61 FVSFFNKWDAENAIQQMGGQWLGGRQI 87
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHMNG 125
D +A +A M+G
Sbjct: 63 HDKRDAEDAMDAMDG 77
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P +E+++ FE FG V+ V++P D T +G AF+ F DP A A
Sbjct: 329 GRLFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKASKGLAFISFTDPAHALAAFR 388
Query: 122 HMNGKRFAGREISVV--------LAAESRKRPEEMRQ 150
+G F GR + ++ AAE K+P ++Q
Sbjct: 389 AKDGSTFQGRLLHLLPAVNKESPTAAED-KKPATLKQ 424
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+LV+N+P + +++R F G+V+ V LPK + RGFAFV++ EA A +
Sbjct: 739 ILVKNLPFEATKKDIRDLFSSQGLVKSVRLPK-KFDNSTRGFAFVEYTTVREAQAAMEAL 797
Query: 124 NGKRFAGREISVVLAAESRKRPEEMR-QRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRSP 182
GR + + + + EE+ QR++ + G G + + LS +
Sbjct: 798 KHTHLLGRHLVLQWSKTATTAEEEVEMQRNKTKSGYVAAGEAETLGNKQGKIKLSTMQIN 857
Query: 183 HHPQGSRSR 191
+ +RSR
Sbjct: 858 EAVRKARSR 866
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L +RN+P E+L F +FG + +++ P D T +P+GFAFV F+ P A A
Sbjct: 390 DSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRA 449
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 450 YAEVDGQVFQGRMLHVL 466
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 814 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD 873
Query: 116 AAEA------QHHMNGKR----FAGREISV 135
A A H+ G+R +A E+S+
Sbjct: 874 AKRAFQALCHSTHLYGRRLVLEWADSEVSL 903
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+FV+P EA
Sbjct: 573 ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFVEPLEAR 626
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 627 KAFRHLAYSKF 637
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V NI ++L+ F+++G + DVY+P+D GE RG+AFV++ D +A +A
Sbjct: 8 SLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDR-RGESRGYAFVRYHDRRDAEDAMDC 66
Query: 123 MNGKRFAGREISVVLA 138
++GK F GRE+ VV+A
Sbjct: 67 VHGKNFDGRELRVVMA 82
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRNI EE R F+++G + +V++ D TG+ +GF +VQF P +A EA
Sbjct: 349 GRLFVRNILYTSTEEEFRTLFQKYGSLEEVHIAVDTRTGKSKGFVYVQFKQPKDAVEAYK 408
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRF 154
++ + F GR + ++ P E ++ HR
Sbjct: 409 SLDKQIFQGRLLHIL--------PAEAKKDHRL 433
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 48 GGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF 107
GG G K ++++N+P + +++ F FG ++ V +PK + RGFAF
Sbjct: 738 GGQSKGGASKTNKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKK-FDKSARGFAF 796
Query: 108 VQFVDPYEAAEAQHHMNGKRFAGREISV 135
V+FV EA A + G GR + +
Sbjct: 797 VEFVLLKEAENAMDQLEGVHLLGRRLVM 824
>gi|405963583|gb|EKC29145.1| Putative RNA-binding protein 19 [Crassostrea gigas]
Length = 878
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+ +C E+L F +FG + +V+L D T + RG+AF+ F+ P A A
Sbjct: 372 GRLFVRNLAYNCTQEDLEELFGKFGPIAEVHLSIDTITKKIRGYAFILFMMPEHAVRAYE 431
Query: 122 HMNGKRFAGREISVV 136
++G F GR + ++
Sbjct: 432 ELDGTIFMGRMLHIL 446
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDY-YTGEPRGFAFVQFVD------PYEA 116
+LVRNIP + + +E+ F+ FG ++ V LPK TG RGF FV F+ ++A
Sbjct: 781 ILVRNIPFEAKKQEIYELFKVFGELKFVRLPKKMGGTGSHRGFGFVDFLTRQDAKRAFDA 840
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+ G+R V+ AES + +++R++
Sbjct: 841 LCHSTHLYGRRL------VLEWAESAEDLDQLRKK 869
>gi|355715636|gb|AES05391.1| RNA binding motif protein 19 [Mustela putorius furo]
Length = 823
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L +RN+P E+L F +FG + +++ P D T +P+GFAFV F+ P A A
Sbjct: 404 DSGRLFIRNLPYTSTEEDLEQLFSKFGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVRA 463
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 464 YAEVDGQVFQGRMLHVL 480
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+FV+P EA
Sbjct: 587 ERSKTVILVKNVPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFVEPLEAR 640
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 641 KAFRHLAYSKF 651
>gi|344247055|gb|EGW03159.1| Heterogeneous nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 384
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ V N+ D E+L F G V DV++ KD +G PRGFAFV P E A +
Sbjct: 1 MYVGNLSFDATQEDLEGLFSAHGTVTDVFILKDRESGRPRGFAFVSMETPEEMNAAIEAL 60
Query: 124 NGKRFAGREISV 135
NG+ F GR +++
Sbjct: 61 NGEEFMGRNLTI 72
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI + +E R FE++G V L +D TG+ RGF FV F +A++A
Sbjct: 240 NFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKA 299
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+N K F G+ + V A + +R EE+R+ SY R +Y+ +L
Sbjct: 300 VQELNEKEFHGQNLYVGRAQKKHEREEELRK--------SYEAARQEKASKYQGVNLYIK 351
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R + P+
Sbjct: 352 NLDDEVDDEKLRQLFSEFGPI 372
>gi|310798289|gb|EFQ33182.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 298
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 49 GGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFV 108
GG YG R + +L V N+ +ELR FERFG V V+L KD TG +GFAF+
Sbjct: 207 GGSKYGER--DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGLAKGFAFI 264
Query: 109 QFVDPYEAAEAQHHMNG 125
F D +A +A M+G
Sbjct: 265 SFADRGDAVKAAAKMDG 281
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|295671551|ref|XP_002796322.1| eukaryotic translation initiation factor 3 RNA-binding subunit
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226283302|gb|EEH38868.1| eukaryotic translation initiation factor 3 RNA-binding subunit
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 288
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 33 GYGGRGRSPPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
G GG PP GG G G+ + + +L V N+ +E+R FERFG V
Sbjct: 176 GAGGNSYVPPHLRKGGAAAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVT 235
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 236 RVFLAKDRETNMAKGFAFISFQDRSDAARACEKMDG 271
>gi|448878350|gb|AGE46138.1| arginine/serine-rich splicing factor SCL25B transcript III [Sorghum
bicolor]
Length = 81
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGE 101
YG R SLLVRN+ DCRPE+LR PF +FG ++D+YLP+DYYTG
Sbjct: 28 YGGRGRDLPTSLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGN 76
>gi|148237346|ref|NP_001084981.1| RNA-binding motif protein, X chromosome [Xenopus laevis]
gi|82236857|sp|Q6IRQ4.1|RBMX_XENLA RecName: Full=RNA-binding motif protein, X chromosome; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G;
Short=hnRNP G
gi|47682580|gb|AAH70649.1| MGC82187 protein [Xenopus laevis]
Length = 370
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G V +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
+NGK G+ I V A +
Sbjct: 68 ELNGKALDGKPIKVEQATK 86
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|542850|pir||S41766 heterogeneous nuclear ribonucleoprotein G - human
Length = 437
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|367022312|ref|XP_003660441.1| hypothetical protein MYCTH_2314155 [Myceliophthora thermophila ATCC
42464]
gi|347007708|gb|AEO55196.1| hypothetical protein MYCTH_2314155 [Myceliophthora thermophila ATCC
42464]
Length = 295
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 27 YSPP--RRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFER 84
Y PP R G G+G GG YG R + +L V N+ +ELR FER
Sbjct: 188 YIPPALRAGAAGQGERM--------GGKYGER--DDLATLRVTNVSEMAEEQELREMFER 237
Query: 85 FGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
FG V V+L KD TG +GFAF+ + D +A +A + M+G
Sbjct: 238 FGRVTRVFLAKDRDTGLAKGFAFISYADREDAIKACNKMDG 278
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 51 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 110
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 111 MMAMNGKSVDGRQIRVDQAGKS 132
>gi|148684912|gb|EDL16859.1| mCG120440 [Mus musculus]
Length = 366
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + L+ + L F ++G + +V L KD T + RGFAFV F +P +A A
Sbjct: 39 GKLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAAR 98
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 99 DMNGKSLDGKAIKVAQATK 117
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F +P +A +A
Sbjct: 5 DEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDA 64
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 65 MEAMNGKSVDGRQIRVDQAGKS 86
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|116196004|ref|XP_001223814.1| hypothetical protein CHGG_04600 [Chaetomium globosum CBS 148.51]
gi|121937877|sp|Q2H0U6.1|EIF3G_CHAGB RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|88180513|gb|EAQ87981.1| hypothetical protein CHGG_04600 [Chaetomium globosum CBS 148.51]
Length = 303
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 41 PP--RRGYGGG-----GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYL 93
PP R G GG GG YG R + +L V N+ +ELR FERFG V V+L
Sbjct: 197 PPAMRAGAGGAQGERMGGKYGER--DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFL 254
Query: 94 PKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
KD TG +GFAF+ + D +A +A + M+G F
Sbjct: 255 AKDRDTGMAKGFAFISYADRDDAVKACNKMDGFGF 289
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRNVDGRNIMVQFA 92
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F ++G + +++ P D T +P+GFAFV F+ P A +A
Sbjct: 374 DSGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFVTFMMPEHAVKA 433
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ + ++ EE
Sbjct: 434 YAGVDGQVFQGRMLHVLPSTIKKEASEE 461
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 801 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD 860
Query: 116 AAEA------QHHMNGKRFAGR--EISVVLAAESRKRPE 146
A A H+ G+R + V L A RK E
Sbjct: 861 AKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAE 899
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L+V+N+P + E R FE FG + D L K G+ R F F+ F EA A +H
Sbjct: 4 LIVKNLPNGMKEERFRQLFEAFGTLTDCSL-KFTKDGKFRKFGFIGFKSEDEARTALNHF 62
Query: 124 N 124
N
Sbjct: 63 N 63
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +L +N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 557 ERSKTVILAKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFLEPLEAR 610
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 611 KAFRHLAYSKF 621
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ E+L FE++G V DVY+P+D YT E +GFAFV++ + +A +A
Sbjct: 13 SLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAEDAIDS 72
Query: 123 MNGKRFAGREISVVLA 138
M+G GRE+ V A
Sbjct: 73 MDGAVLDGRELRVQTA 88
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|154298414|ref|XP_001549630.1| eukaryotic translation initiation factor 3, subunit 4 [Botryotinia
fuckeliana B05.10]
gi|229463755|sp|A6SGN8.1|EIF3G_BOTFB RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|347840767|emb|CCD55339.1| similar to eukaryotic translation initiation factor 3 subunit g
[Botryotinia fuckeliana]
Length = 288
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 36 GRGRS---PPRRGYGGGGGGY----GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVV 88
G G+S PP GG GG G+ + + +L V N+ +ELR FERFG V
Sbjct: 175 GAGKSSYVPPHLRNGGTAGGERMGGGKFERDDLATLRVTNVSEMAEEQELRDMFERFGRV 234
Query: 89 RDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD TG +GFAF+ F + +AA+A M+G
Sbjct: 235 TRVFLAKDRETGLAKGFAFISFQERSDAAKACEKMDG 271
>gi|432099499|gb|ELK28647.1| Heterogeneous nuclear ribonucleoprotein G-like 1 [Myotis davidii]
Length = 535
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 177 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 236
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 237 DMNGKSLDGKAIKVEQATK 255
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+P +ELR F +G V V L D TG PRGF FV D +AA A
Sbjct: 3 SIYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMSDT-DAASAIEA 61
Query: 123 MNGKRFAGREISVVLAAESRKRP 145
++GK F GR + V A E ++RP
Sbjct: 62 LDGKDFGGRNLRVNEAQERKERP 84
>gi|224105333|ref|XP_002313773.1| predicted protein [Populus trichocarpa]
gi|222850181|gb|EEE87728.1| predicted protein [Populus trichocarpa]
Length = 974
Score = 60.5 bits (145), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L++RN+P +P E++ FE G V DV++P + TG +GFAFV+F +A A
Sbjct: 282 LIIRNLPFKAKPNEIKGVFESAGCVWDVFVPHNSETGLSKGFAFVKFTCKQDAENAIQKF 341
Query: 124 NGKRFAGREISV 135
NG++F R I+V
Sbjct: 342 NGQKFGKRPIAV 353
Score = 38.1 bits (87), Expect = 4.7, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V ++P +L F G +R ++ + E RGF FVQF +A A
Sbjct: 20 TLFVSSLPYSFTKSQLEETFSDVGPIRRCFMVTQKGSTEHRGFGFVQFALKDDANRAIEI 79
Query: 123 MNGKRFAGREISV 135
NG GR+I+V
Sbjct: 80 KNGSSVGGRKIAV 92
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+N+ + EE R FE++G + + +D TG+ RGF F F+ AA A
Sbjct: 234 NFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFFYFLKHESAAAA 293
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRH---RFRGGSSYGG 162
+N K + G+++ V A + +R EE+R++H R S Y G
Sbjct: 294 VEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQG 339
>gi|198424821|ref|XP_002130575.1| PREDICTED: similar to RNA binding motif protein 28 [Ciona
intestinalis]
Length = 819
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
RK L++RN+ C +EL++ F+RFG + +V +P G+ RGFAFVQF E
Sbjct: 214 RKSSKKSRLIIRNLSFFCTEDELKSEFKRFGKITEVKIPV-KPDGKKRGFAFVQFSHVLE 272
Query: 116 AAEAQHHMNGKRFAGREISV 135
A +A +N GR+++V
Sbjct: 273 AGKAIKEVNMSEIKGRKVAV 292
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA--- 119
++ +RN+ + EL+ E+FG + + + TG P+G AFVQF EA +
Sbjct: 407 TVFIRNLSYESEEAELKIVMEKFGDINYCKIVINKATGLPKGSAFVQFATKEEAEKCIEA 466
Query: 120 -QHHMNGKRFAGREISVVLA---AESRK 143
Q ++ GR++ V LA AES K
Sbjct: 467 PQISLD-----GRDLFVTLATTRAESTK 489
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|361124073|gb|EHK96194.1| putative Multiple RNA-binding domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 763
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 61 HGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQ 120
+G L VRN+P ++LR FE FG + +++L D +G +GF VQ+ +P AAEA
Sbjct: 234 NGRLFVRNLPYTATEDDLRNHFEPFGPLEEIHLAVDA-SGTSKGFLLVQYSNPESAAEAF 292
Query: 121 HHMNGKRFAGREISVVLAAESRK 143
H ++G+ F GR + ++ AA R+
Sbjct: 293 HQLDGEPFQGRLLHILPAANKRE 315
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 43 RRGYGGGGGGYGRRKEQ-------NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPK 95
+ + G RRKE ++++N+P + +++R F +G +R V +PK
Sbjct: 613 KASHKGVDAAEERRKEDRAKKISGKRTKIIIKNLPFEASKKDIRTLFGTYGQLRSVRMPK 672
Query: 96 DYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFR 155
+ RGFAF F+ EA A + GR + + AAE EE +R + +
Sbjct: 673 -KFDHSARGFAFADFITAREAENALEALKDTHLLGRRLVLEFAAEDSIDAEEEIERMQKK 731
Query: 156 GGSSY 160
GS
Sbjct: 732 VGSQV 736
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 55 RRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRG-FAFVQFVDP 113
+++E+ S+LV+N P EELR FE FG V V +P P G A V+F P
Sbjct: 410 KKRERGDTSILVKNFPYGMTLEELRKMFEEFGQVLRVLMP-------PTGTIAIVEFAQP 462
Query: 114 YEA 116
A
Sbjct: 463 THA 465
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ ++LR F RFG V D+Y+P+D T E RGFAFV++ EA A
Sbjct: 16 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFAFVRYCTDREADCAIRG 75
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
M+G + GRE+ V A R P
Sbjct: 76 MDGHKVDGREVRVQRAKYGRPTPN 99
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+P D +L F +FG V ++++ D + +GFA+VQ+++P A +A +
Sbjct: 303 LFVRNLPYDASESDLEPVFSKFGKVEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKEL 362
Query: 124 NGKRFAGREISVVLAA 139
+GK F GR + ++ AA
Sbjct: 363 DGKHFQGRLMHILPAA 378
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++++N+P +++R+ F +G +R V +PK + RGF F FV EA A +
Sbjct: 704 IIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS-ARGFGFADFVSAREAENAMDAL 762
Query: 124 NGKRFAGREISVVLAAESRKRPEE 147
GR + + A E PE+
Sbjct: 763 KNTHLLGRRLVLEFANEEAVDPEQ 786
>gi|413955615|gb|AFW88264.1| hypothetical protein ZEAMMB73_484317, partial [Zea mays]
Length = 148
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYT 99
SLLVRN+ DCRP++LR PF +FG V+D+YLPKDYYT
Sbjct: 111 SLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYT 147
>gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKNIKVEQATK 86
>gi|312371125|gb|EFR19385.1| hypothetical protein AND_22609 [Anopheles darlingi]
Length = 377
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V NIP D E L+ F G+V + L D TG+P+G+ F ++ D A A +
Sbjct: 17 SVFVGNIPYDATEEALKEIFCEVGLVMSMKLVYDRETGKPKGYGFCEYKDKETALSAMRN 76
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYG 161
+NG F GR + V A + R E H R S YG
Sbjct: 77 LNGYVFGGRPLRVDNACTEKSRLEMAALLHGPRAESPYG 115
>gi|115384864|ref|XP_001208979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196671|gb|EAU38371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 38/65 (58%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
E LRA FE+FG V + + KD TG RGF FV F P EA A + +N + F GR I V
Sbjct: 43 ESLRAGFEKFGTVDNAIVVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQEFDGRIIRV 102
Query: 136 VLAAE 140
A+E
Sbjct: 103 DFASE 107
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|4098582|gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L + F ++G + +V L KD T + RGFAF+ F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKSIKVEQATK 86
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|406697498|gb|EKD00757.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1039
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N G L VRN+ ++++A FE++G + DV++P + TGEP G AFV F DP A A
Sbjct: 490 NTGRLFVRNLAFVATADDIKAHFEKYGPIVDVHMPVSHSTGEPLGTAFVLFRDPNNALSA 549
Query: 120 QHHMNGKRFAGREISVVLAAESRKRP 145
+ ++ F GR + V+ R RP
Sbjct: 550 RQSLDKTTFQGRLLHVL---PGRARP 572
Score = 38.5 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG-----EPRGFAFVQFVDPYEAAE 118
LLV+N+P + +++RA F +G ++ + +P+ RGFAF++F EA
Sbjct: 913 LLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAEAQR 972
Query: 119 AQHHMNGKRFAGREI 133
A + GR +
Sbjct: 973 AMDALKHTHLLGRHL 987
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F ++G + +++ P D T +P+GFAFV F+ P A +A
Sbjct: 406 DSGRLFVRNLPYTSTEEDLEKIFSKYGPLSELHYPIDSLTKKPKGFAFVSFMFPEHAVKA 465
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 466 YAEVDGQVFQGRMLHVL 482
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 833 RKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFLTKQD 892
Query: 116 AAEA------QHHMNGKRFAGR--EISVVLAAESRKRPE 146
A A H+ G+R + V L A RK E
Sbjct: 893 AKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAE 931
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 589 ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFLEPLEAR 642
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 643 KAFRHLAYSKF 653
>gi|297829752|ref|XP_002882758.1| hypothetical protein ARALYDRAFT_897406 [Arabidopsis lyrata subsp.
lyrata]
gi|297328598|gb|EFH59017.1| hypothetical protein ARALYDRAFT_897406 [Arabidopsis lyrata subsp.
lyrata]
Length = 139
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 27 YSP-PRRGYGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERF 85
YSP P R YG R RSP Y G R SLLVRN+ DCR ++LR PF RF
Sbjct: 7 YSPSPPRSYGRRYRSPSPVDYYRG------RSRDPPTSLLVRNLRHDCRQDDLRRPFGRF 60
Query: 86 GVVRDVYLPKDYYTG 100
G ++D+YLP++YYTG
Sbjct: 61 GRLKDIYLPRNYYTG 75
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +
Sbjct: 11 EGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAED 70
Query: 119 AQHHMNG 125
A M+G
Sbjct: 71 AMDAMDG 77
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 60 NHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
NH + L V NI +L+ FE FG + V L KD TG RG+ FVQF DP +
Sbjct: 271 NHAAPFHRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQ 329
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYG 169
A EA MNG AGR I V L + + P+ QR + +G + SS+ G
Sbjct: 330 AREALEKMNGFDLAGRAIRVGLGND-KFTPDSSAQRLQSQGANQQNFQGSSFSG 382
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V+ + R +EL A FE+ G V++ + KD +G +G +V+F + A A
Sbjct: 179 TIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKNEDSVAPA-IQ 237
Query: 123 MNGKRFAGREISVVLAAESRKR 144
+ G++ G I L + R
Sbjct: 238 LTGQKLLGIPIIAQLTEAEKNR 259
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|448878238|gb|AGE46082.1| arginine/serine-rich splicing factor SCL25A transcript II [Zea
mays]
Length = 80
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYT 99
SLLVRN+ DCRP++LR PF +FG V+D+YLPKDYYT
Sbjct: 40 SLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYT 76
>gi|46446527|ref|YP_007892.1| nucleic acid-binding protein [Candidatus Protochlamydia amoebophila
UWE25]
gi|46400168|emb|CAF23617.1| probable nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 112
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ V N+ E+L+A FE FG V + D TG+ +GF FV+ +A A +
Sbjct: 4 IFVGNLSWKTSEEQLKAHFEAFGKVVSAKIVTDQMTGKSKGFGFVEMESANDAENAIREL 63
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGG----SSYGGPRSSYY 168
NGK R + V LA E R R E R+ F GG SS+GG R S Y
Sbjct: 64 NGKPLVDRSLRVSLAQE-RDRSER-REPRSFGGGDRDRSSFGGDRRSNY 110
>gi|401888739|gb|EJT52690.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1040
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+ ++++A FE+FG + DV++P + TGEP G AFV F DP A A+
Sbjct: 493 GRLFVRNLAFVATADDIKAHFEKFGPIVDVHMPVSHSTGEPLGTAFVLFRDPNNALSARQ 552
Query: 122 HMNGKRFAGREISVVLAAESRKRP 145
++ F GR + V+ R RP
Sbjct: 553 SLDKTTFQGRLLHVL---PGRARP 573
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTG-----EPRGFAFVQFVDPYEAAE 118
LLV+N+P + +++RA F +G ++ + +P+ RGFAF++F EA
Sbjct: 914 LLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAEAQR 973
Query: 119 AQHHMNGKRFAGREI 133
A + GR +
Sbjct: 974 AMDALKHTHLLGRHL 988
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N+ ++ ++N+ D +E R FE++G V + +D TG+ RGF F+ F AA+A
Sbjct: 238 NYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAAKA 297
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N + G+E+ V A + +R EE+R+ +
Sbjct: 298 VEELNSREIHGQELYVGRAQKKHEREEELRKSYE 331
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|402860841|ref|XP_003894827.1| PREDICTED: RNA-binding motif protein, X chromosome-like [Papio
anubis]
Length = 391
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDQKINKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|302661181|ref|XP_003022260.1| hypothetical protein TRV_03582 [Trichophyton verrucosum HKI 0517]
gi|291186199|gb|EFE41642.1| hypothetical protein TRV_03582 [Trichophyton verrucosum HKI 0517]
Length = 314
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 35 GGRGRS-----PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
GG G+S PP GG G G G+ + + +L V N+ +ELR FERFG
Sbjct: 175 GGLGQSGGSYVPPAMRKGGAGVGDKMGGKYERDDLATLRVTNVSELAEEQELRDMFERFG 234
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
V V+L KD T +GFAF+ F D +AA A M+G +
Sbjct: 235 RVTRVFLAKDRETNMAKGFAFISFADRSDAARACDKMDGCKL 276
>gi|302509834|ref|XP_003016877.1| hypothetical protein ARB_05170 [Arthroderma benhamiae CBS 112371]
gi|291180447|gb|EFE36232.1| hypothetical protein ARB_05170 [Arthroderma benhamiae CBS 112371]
Length = 314
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 35 GGRGRS-----PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFG 86
GG G+S PP GG G G G+ + + +L V N+ +ELR FERFG
Sbjct: 175 GGLGQSGGSYVPPAMRKGGAGVGDKMGGKYERDDLATLRVTNVSELAEEQELRDMFERFG 234
Query: 87 VVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
V V+L KD T +GFAF+ F D +AA A M+G +
Sbjct: 235 RVTRVFLAKDRETNMAKGFAFISFADRSDAARACDKMDGCKL 276
>gi|82802777|gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|182412766|ref|YP_001817832.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
gi|177839980|gb|ACB74232.1| RNP-1 like RNA-binding protein [Opitutus terrae PB90-1]
Length = 117
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
++ L V N+ EELR+ F +FG V DVY+ D TG PRGFAFV EA
Sbjct: 1 MSNSKLYVGNLSFKTTEEELRSAFGQFGSVTDVYVAMDKMTGRPRGFAFVTMGTAEEAKA 60
Query: 119 AQHHMNGKRFAGREISVVLAAESRKRPEEMR 149
A +NG GR+++V + RP+E R
Sbjct: 61 AAEKLNGTDLGGRQLTV-----NEARPKEER 86
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
MNGK GR+I V A +S E R R +RGGS+
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS----SENRSRG-YRGGST 98
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D E L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C EEL+ F + G + +++ P D T + +GFAF+ ++ P A A
Sbjct: 413 GRLFVRNLPYTCTEEELKELFAKHGPLSELHFPIDSLTKKTKGFAFITYMIPENAVAALA 472
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRS 181
++G F GR + ++ + +++ + S G P SS Y R + S
Sbjct: 473 QLDGHVFQGRMLHLLPSTVKKEKADP----------SDAGAPGSSSYKRQKDAKTKALSS 522
Query: 182 PHH 184
H
Sbjct: 523 NSH 525
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +L RNIP ELR F FG ++ V LPK +G RGF F+ FV ++
Sbjct: 813 KKQTGTKILARNIPFQASVRELRELFCTFGELKTVRLPKKAAGSGNHRGFGFIDFVTKHD 872
Query: 116 AAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A +A H+ G+R V+ A++ + E +R++
Sbjct: 873 AKKAFDALCHSTHLYGRRL------VLEWADAEETVEALRRK 908
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P EEL F R+G + +++ P D T +P+GFAFV F+ P A A
Sbjct: 402 DSGRLFVRNLPYTSTEEELEQLFSRYGPLSELHYPIDGLTKKPKGFAFVTFMFPEHAVRA 461
Query: 120 QHHMNGKRFAGREISVV 136
++G+ F GR + V+
Sbjct: 462 YAEVDGQVFQGRMLHVL 478
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 829 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGSHRGFGFVDFLTKQD 888
Query: 116 AAEA------QHHMNGKRFAGR--EISVVLAAESRKRPE 146
A A H+ G+R + V L A RK E
Sbjct: 889 AKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAE 927
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 585 ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGVT------AIVEFLEPLEAR 638
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 639 KAFRHLAYSKF 649
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+ + PE+L A F ++G V+ V LP D TG RGFAFV+ E A
Sbjct: 2 SIYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAIDA 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGG 162
++G + GR + V ++ +P E R R G+S GG
Sbjct: 62 LDGAEWMGRNMKV-----NKAKPREDRGSSDGRRGNSNGG 96
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|157823451|ref|NP_001100890.1| RNA-binding motif protein, X chromosome retrogene-like [Rattus
norvegicus]
gi|71152131|sp|P84586.1|RMXRL_RAT RecName: Full=RNA-binding motif protein, X chromosome
retrogene-like; AltName: Full=Heterogeneous nuclear
ribonucleoprotein G retrogene-like; Short=hnRNP G;
AltName: Full=RNA-binding motif protein, X chromosome
retrogene; Contains: RecName: Full=RNA-binding motif
protein, X chromosome retrogene-like, N-terminally
processed
gi|149037963|gb|EDL92323.1| RNA binding motif protein, X chromosome retrogene (predicted)
[Rattus norvegicus]
Length = 388
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|410913463|ref|XP_003970208.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Takifugu rubripes]
Length = 391
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKNIKVEQATK 86
>gi|82802775|gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|82802771|gb|ABB92436.1| RBM1 [Pan troglodytes]
gi|82802773|gb|ABB92437.1| RBM1 [Gorilla gorilla]
Length = 385
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 89
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
+ V N+ + E +R F +G ++D+ + D TG RGFAF+ + P EA EA M
Sbjct: 6 IYVGNLKFSLKEENIRQIFSVYGAIQDLKMIHDRETGNFRGFAFITYASPSEAEEAVAQM 65
Query: 124 NGKRFAGREISVVLAAESRKRPE 146
NG+ GR + V A + RK +
Sbjct: 66 NGQPIDGRNLKVTFAEDKRKEKQ 88
>gi|1749496|dbj|BAA13806.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 129
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 50 GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
G +R+ + +L V N+ D R EELR F RFG ++ VYL KD TG +GFAFV
Sbjct: 37 GDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVS 96
Query: 110 FVDPYEAAEAQHHMNG 125
+ D A +A+ ++G
Sbjct: 97 YYDRDCAIKARDRLDG 112
>gi|2951777|dbj|BAA25105.1| translation initiation factor 3 [Schizosaccharomyces pombe]
Length = 280
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 50 GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
G +R+ + +L V N+ D R EELR F RFG ++ VYL KD TG +GFAFV
Sbjct: 188 GDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVS 247
Query: 110 FVDPYEAAEAQHHMNG 125
+ D A +A+ ++G
Sbjct: 248 YYDRDCAIKARDRLDG 263
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI L+ EE R F ++G V L +D G+ RGF FV F AA+A
Sbjct: 244 NFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDS-EGKSRGFGFVNFTTHECAAKA 302
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+++ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 303 VEELNGKEFRGQDLYVGRAQKKHEREEELRK--------SYEAARLEKANKYQGVNLYIK 354
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R Y P+
Sbjct: 355 NLADDIDDDKLRQMFSEYGPI 375
>gi|82802769|gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L + + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 38 GRSPPRR--GYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPK 95
G PP R G G RR+E+N S+ V N+ D R ++LR F FG + +Y+
Sbjct: 178 GYVPPSRRAGATMADGDSMRRREEN--SVRVTNLSEDTREDDLRELFSPFGPISRIYIAY 235
Query: 96 DYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAA 139
D TGE RGFAFV FV +AA A ++G + + V AA
Sbjct: 236 DRETGESRGFAFVNFVHREDAARAVQKLDGHGYDNLILRVEFAA 279
>gi|410913465|ref|XP_003970209.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Takifugu rubripes]
Length = 383
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQFFSKYGRIAEVLLMKDRETNKSRGFAFVTFESPSDAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKNIKVEQATK 86
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
RK+ NH + V ++ D LR+ F +FG V D + KD TG+PRG+ FV + +E
Sbjct: 85 RKDTNHYHIFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDSATGKPRGYGFVSYQFKHE 144
Query: 116 AAEAQHHMNGKRFAGREI 133
A A MNG GR I
Sbjct: 145 AENAMQSMNGAWLGGRNI 162
>gi|149244924|ref|XP_001527005.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449399|gb|EDK43655.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 795
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 64 LLVRNIPLDCR-PEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
L++RN+P C+ P+EL+ F R+G V D Y+PK G+ GFAFV A A
Sbjct: 154 LIIRNLPWSCKKPDELKKIFSRYGAVFDAYVPK-KKGGQMCGFAFVVMKKIAAAERAVKE 212
Query: 123 MNGKRFAGREISVVLAAESRK 143
G + GRE++V A E K
Sbjct: 213 CQGLKIDGREVAVDFAVEKSK 233
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 26/52 (50%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
Q S+ VRNIP D L+ FE FG V+ D TG RG AFV F
Sbjct: 357 QEAFSIFVRNIPYDADESSLKEHFESFGPVKYALPVIDKETGLARGSAFVAF 408
>gi|82802779|gb|ABB92440.1| RBM1 [Chlorocebus sabaeus]
Length = 385
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+P + +++ F+ +G ++ V+LP D TG+ RGFAFV+ P E A+A
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAA 61
Query: 123 MNGKRFAGREISVVLAAESRKRP 145
++G ++ GRE+ V A E +P
Sbjct: 62 LDGAQWMGRELKVNQAREREPKP 84
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F +P EA +A
Sbjct: 3 DEGKLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDA 62
Query: 120 QHHMNGKRFAGREISV 135
MNGK GR+I V
Sbjct: 63 MLAMNGKSLDGRQIRV 78
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%)
Query: 54 GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDP 113
G+ KE N +L V N+P +L F FG + + D +TG +G+ FVQ+ DP
Sbjct: 221 GKLKEGNGTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFVQYSDP 280
Query: 114 YEAAEAQHHMNGKRFAGREISVVLA 138
AAEA HMNG+ GR + V LA
Sbjct: 281 RYAAEAIKHMNGRMVEGRMLEVRLA 305
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
KE + ++ V+N+PL ++L F +G V + DY +G +G+ FV+F DP++A
Sbjct: 418 KEVDMSNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISKGYGFVKFSDPHDA 477
Query: 117 AEAQHHMNGKRFAGREISV 135
A A +NG GR+I V
Sbjct: 478 AHAVIELNGCLVEGRKILV 496
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 54 GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDP 113
G KE + L V N+PL ++L F +G V V + +D+ TG +G+ FV++ DP
Sbjct: 311 GSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDP 370
Query: 114 YEAAEAQHHMNGKRFAGREISVVLAAES 141
AA A +NG G+++ V +AA S
Sbjct: 371 QHAAHAIFQLNGHLIEGKKMEVRVAAVS 398
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISV 135
++L F G + + D +TG +GF FV+F D Y AA A HMNG G ++V
Sbjct: 828 DKLIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFADAYSAATAITHMNGYPLDGHMLAV 887
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
KE + +L V NIP +L F FG + + + +G+ FV+F D + A
Sbjct: 515 KEIDMSNLYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQS-NNSSKGYGFVKFADSHCA 573
Query: 117 AEAQHHMNGKRFAGREISVVLA 138
AEA MNG G ISV +A
Sbjct: 574 AEAVAMMNGALIEGETISVRVA 595
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 60 NHGS-LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
N GS L V N+ + +LR FER+G ++ + D T E RGFAFV + +P +A +
Sbjct: 105 NQGSSLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAED 164
Query: 119 AQHHMNGKRFAGREISV 135
+ +NG G+EI V
Sbjct: 165 SLSKLNGYDLLGKEIRV 181
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G + VRN+ +++ A F++FG + +V+L D T +P+GFAFV F+ P A +A
Sbjct: 322 DTGRIFVRNLSYTVTEDDIEALFKKFGPISEVHLSIDKITRKPKGFAFVSFMFPEHAIKA 381
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSS 166
++GK GR + ++ A E+ ++ F+ +SS
Sbjct: 382 FSELDGKLLQGRLLHLIPAKAKNSEEEDAQKPMSFKDKKEAEQKKSS 428
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 9/114 (7%)
Query: 55 RRKEQNHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQ 109
+RK+ + G +LVRNIP + +EL+ F FG +RD+ LPK TG RGFAFV
Sbjct: 726 KRKKTDLGKESTKILVRNIPFEATKKELQELFSVFGTLRDIRLPKKMAGTGRHRGFAFVD 785
Query: 110 FVDPYEAAEA-QHHMNGKRFAGREISVVLAAESRKRPEEMRQR---HRFRGGSS 159
F+ +A A Q GR + + A+ + + +R++ H +GG S
Sbjct: 786 FLTKNDAKRAFQALCQSTHLYGRRLVLEWASSDDQEVDTLRKKTADHFLQGGPS 839
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGF-AFVQFVDPYEA 116
E++ +LV+N+P P+E+R F +FG + V LP P G A V+F +P EA
Sbjct: 503 ERSKTVILVKNLPAKTHPDEIRDAFAKFGTLSRVVLP-------PWGVCALVEFQEPSEA 555
>gi|19112519|ref|NP_595727.1| translation initiation factor eIF3g [Schizosaccharomyces pombe
972h-]
gi|6016322|sp|P78795.2|EIF3G_SCHPO RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|3006180|emb|CAA18400.1| translation initiation factor eIF3g [Schizosaccharomyces pombe]
Length = 282
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 50 GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
G +R+ + +L V N+ D R EELR F RFG ++ VYL KD TG +GFAFV
Sbjct: 190 GDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVS 249
Query: 110 FVDPYEAAEAQHHMNG 125
+ D A +A+ ++G
Sbjct: 250 YYDRDCAIKARDRLDG 265
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 53 YGRRKEQ------NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFA 106
+G R+E+ + G L V + D + L F ++G + +V + KD T RGF
Sbjct: 3 WGTREEEQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFG 62
Query: 107 FVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAES 141
FV F + +A +A MNGK GR+I V A +S
Sbjct: 63 FVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKS 97
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F R+G V +++ P D T +P+GFAFV F+ P A +A
Sbjct: 403 DSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 462
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ + ++ E+
Sbjct: 463 YAEVDGQVFQGRMLHVLPSTIKKEASED 490
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 814 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQD 873
Query: 116 AAEA------QHHMNGKR----FAGREISVVLAAESRKRPEEMRQ 150
A A H+ G+R +A E+S L A RK E +
Sbjct: 874 AKRAFNALCHSTHLYGRRLVLEWADSEVS--LPALRRKTAEHFHE 916
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 586 ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 639
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 640 KAFRHLAYSKF 650
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 51/88 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F R+G V +++ P D T +P+GFAFV F+ P A +A
Sbjct: 361 DSGRLFVRNLPYTSSEEDLEKLFSRYGPVSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 420
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ + ++ E+
Sbjct: 421 YAEVDGQVFQGRMLHVLPSTIKKEASED 448
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 787 RKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKLTGTGTHRGFGFVDFLTKQD 846
Query: 116 AAEA------QHHMNGKR----FAGREISVVLAAESRKRPEEMRQ 150
A A H+ G+R +A E+S L A RK E +
Sbjct: 847 AKRAFNALCHSTHLYGRRLVLEWADSEVS--LPALRRKTAEHFHE 889
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 544 ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 597
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 598 KAFRHLAYSKF 608
>gi|332809466|ref|XP_003339040.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|332809468|ref|XP_003308251.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 [Pan
troglodytes]
gi|426330271|ref|XP_004026144.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 3
[Gorilla gorilla gorilla]
gi|426330273|ref|XP_004026145.1| PREDICTED: kynurenine--oxoglutarate transaminase 3 isoform 4
[Gorilla gorilla gorilla]
Length = 391
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|291384550|ref|XP_002708825.1| PREDICTED: RNA binding motif protein, X-linked-like [Oryctolagus
cuniculus]
Length = 359
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNPETDEKALEAAFGKYGRIIEVLLMKDRETSKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Query: 48 GGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAF 107
GG G + K + G ++V+N+P + +++ F FG ++ V +PK + RGFAF
Sbjct: 724 GGSTGTSKSKGKQSGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPK-KFDKSARGFAF 782
Query: 108 VQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEE----MRQRHRFRGGS-SYGG 162
++F+ P EA A + G GR + + A E EE M Q+ R + + YG
Sbjct: 783 IEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQEEAVNAEEEISRMTQKARKQMATREYGA 842
Query: 163 PRSS 166
+ +
Sbjct: 843 LKKA 846
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RNI + ++ F FG + +V++ D TG+ +GFA++ F DP +A +A
Sbjct: 324 GRLFLRNILYNSTEQDFERLFSPFGELEEVHIAIDTRTGQSKGFAYILFKDPKDAVQAYI 383
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++ + F GR + +LAA+++K
Sbjct: 384 ELDKQIFQGRLLH-ILAADAKK 404
>gi|448878240|gb|AGE46083.1| arginine/serine-rich splicing factor SCL25A transcript III [Zea
mays]
Length = 77
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYT 99
SLLVRN+ DCRP++LR PF +FG V+D+YLPKDYYT
Sbjct: 40 SLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYT 76
>gi|21361809|ref|NP_062556.2| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|242117971|ref|NP_001156008.1| RNA binding motif protein, X-linked-like-1 [Homo sapiens]
gi|74760797|sp|Q96E39.1|RMXL1_HUMAN RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
gi|15277908|gb|AAH12942.1| Cysteine conjugate-beta lyase 2 [Homo sapiens]
gi|57997143|emb|CAI46148.1| hypothetical protein [Homo sapiens]
gi|119593561|gb|EAW73155.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|119593562|gb|EAW73156.1| hCG23341, isoform CRA_b [Homo sapiens]
gi|208967733|dbj|BAG72512.1| cysteine conjugate-beta lyase 2 [synthetic construct]
Length = 390
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|158292144|ref|XP_313699.3| AGAP004414-PA [Anopheles gambiae str. PEST]
gi|157017295|gb|EAA09129.3| AGAP004414-PA [Anopheles gambiae str. PEST]
Length = 390
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V NIP D E L+ F G+V + L D TG+P+G+ F ++ D A A +
Sbjct: 17 SVFVGNIPYDATEEALKEIFCEVGLVLSMKLVYDRETGKPKGYGFCEYKDKETALSAMRN 76
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYG 161
+NG F GR + V A + R E H R S YG
Sbjct: 77 LNGYVFGGRPLRVDNACTEKSRMEMAALLHVNRAESPYG 115
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V+NIP EE++A FE FG V DV LP GE RGFAFV+F D A +A +M
Sbjct: 194 LYVKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEVPGENRGFAFVKFADLESATKA--YM 251
Query: 124 NGKRFAGREISVVLAAESRKRPE 146
F GR + + A+S PE
Sbjct: 252 TSVIFEGRHLQL---AQSEPEPE 271
>gi|297279100|ref|XP_002801676.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 1
[Macaca mulatta]
gi|297279102|ref|XP_002801677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like isoform 2
[Macaca mulatta]
Length = 391
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI + ++L+A FE FG + V L KD G RG+ FVQF D +A EA M
Sbjct: 285 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDD-NGRSRGYGFVQFRDAGQAREALEKM 343
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYG 169
NG AGR I V L + H+F G + G S++ G
Sbjct: 344 NGFDLAGRPIRVGLGNDKFTPESTANLMHKFSGNNQGGFQGSAFSG 389
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 35 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 94
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 95 MMAMNGKSVDGRQIRVDQAGKS 116
>gi|225554798|gb|EEH03093.1| eukaryotic translation initiation factor 3 [Ajellomyces capsulatus
G186AR]
Length = 299
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 33 GYGGRGRSPPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
G GG PP GG G G+ + + +L V N+ +E+R FERFG V
Sbjct: 187 GAGGSSYVPPHLRKGGASAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVT 246
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 247 RVFLAKDRETNMAKGFAFISFQDRSDAARACEKMDG 282
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|432877561|ref|XP_004073160.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 2
[Oryzias latipes]
Length = 380
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKPIKVEQATK 86
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana) tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana) tropicalis]
Length = 166
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + + E L F ++G V +V + KD + RGF FV F +P +A +A
Sbjct: 4 DEGKLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|374253685|sp|D4AE41.1|RMXL1_RAT RecName: Full=RNA binding motif protein, X-linked-like-1; AltName:
Full=Heterogeneous nuclear ribonucleoprotein G-like 1;
Contains: RecName: Full=RNA binding motif protein,
X-linked-like-1, N-terminally processed
Length = 388
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 60 NHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
NH + L V NI +L+ FE FG + V L KD TG RG+ FVQF DP +
Sbjct: 273 NHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQ 331
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYG 169
A EA MNG AGR I V L + + P+ QR + +G + + S + G
Sbjct: 332 AREALEKMNGFDLAGRAIRVGLGND-KFTPDSNAQRMQSQGANQHNFQGSLFSG 384
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ ++ V+ + R +EL A FE+ G V++ + KD +G +G +V+F A
Sbjct: 176 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDSVA 235
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKR 144
A + G++ G I L + R
Sbjct: 236 PA-IQLTGQKLLGIPIIAQLTEAEKNR 261
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 60 NHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
NH + L V NI +L+ FE FG + V L KD TG RG+ FVQF DP +
Sbjct: 269 NHAAPFHRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQ 327
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGR 170
A EA MNG AGR I V L + + P+ QR + G + SS+ G+
Sbjct: 328 AREALEKMNGFDLAGRAIRVGLGND-KFTPDSSAQRSQGHGANQQNFQGSSFSGQ 381
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V+ + R +EL A FE+ G V++ + KD +G +G +V+F A A
Sbjct: 177 TIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEESVAPA-IQ 235
Query: 123 MNGKRFAGREISVVLAAESRKR 144
+ G++ G I L + R
Sbjct: 236 LTGQKLLGIPIIAQLTEAEKNR 257
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P E+L F ++G + +++ P D T +P+GFAF+ F+ P A +A
Sbjct: 441 GRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYS 500
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRS 181
++G+ F GR + V+ + ++ E+ S+ G SSY + ++ + S S
Sbjct: 501 EVDGQVFQGRMLHVLPSTIKKEASED---------ASALGS--SSYKKKKEAQDKANSAS 549
Query: 182 PHH 184
H+
Sbjct: 550 SHN 552
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 866 RKQTTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQD 925
Query: 116 AAEA------QHHMNGKRFA 129
A A H+ G+R
Sbjct: 926 AKRAFNALCHSTHLYGRRLV 945
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 622 ERSKTVILVKNLPAGTLAAELQETFGRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 675
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 676 KAFRHLAYSKF 686
>gi|240276830|gb|EER40341.1| eukaryotic translation initiation factor 3 [Ajellomyces capsulatus
H143]
gi|325095132|gb|EGC48442.1| eukaryotic translation initiation factor 3 [Ajellomyces capsulatus
H88]
Length = 288
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 33 GYGGRGRSPPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
G GG PP GG G G+ + + +L V N+ +E+R FERFG V
Sbjct: 176 GAGGSSYVPPHLRKGGASAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVT 235
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 236 RVFLAKDRETNMAKGFAFISFQDRSDAARACEKMDG 271
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 60 NHGS----LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
NH + L V NI +L+ FE FG + V L KD TG RG+ FVQF DP +
Sbjct: 274 NHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQ 332
Query: 116 AAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYG 169
A EA MNG AGR I V L + + P+ QR + +G + + S + G
Sbjct: 333 AREALEKMNGFDLAGRAIRVGLGND-KFTPDSNAQRMQSQGANQHNFQGSLFSG 385
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ ++ V+ + R +EL A FE+ G V++ + KD +G +G +V+F A
Sbjct: 177 ERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKSEDAVA 236
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKR 144
A + G++ G I L + R
Sbjct: 237 PA-IQLTGQKLLGIPIIAQLTEAEKNR 262
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V N+P E++RA FE +G V V L D TG PRGF FV+ D A EA +
Sbjct: 4 NIYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETGRPRGFGFVEMEDQ-GALEAIEN 62
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
++GK F GR + V E+R RPE
Sbjct: 63 LDGKDFGGRNLKV---NEARPRPE 83
>gi|154272443|ref|XP_001537074.1| hypothetical protein HCAG_08183 [Ajellomyces capsulatus NAm1]
gi|150409061|gb|EDN04517.1| hypothetical protein HCAG_08183 [Ajellomyces capsulatus NAm1]
Length = 288
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 33 GYGGRGRSPPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVR 89
G GG PP GG G G+ + + +L V N+ +E+R FERFG V
Sbjct: 176 GAGGSSYVPPHLRKGGASAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVT 235
Query: 90 DVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
V+L KD T +GFAF+ F D +AA A M+G
Sbjct: 236 RVFLAKDRETNMAKGFAFISFQDRSDAARACEKMDG 271
>gi|432877559|ref|XP_004073159.1| PREDICTED: RNA-binding motif protein, X chromosome-like isoform 1
[Oryzias latipes]
Length = 386
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQYFSKYGRIVEVILMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKPIKVEQATK 86
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 25 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 84
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 85 MMAMNGKSVDGRQIRVDQAGKS 106
>gi|353558839|sp|C8V330.1|EIF3G_EMENI RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|259479801|tpe|CBF70356.1| TPA: Eukaryotic translation initiation factor 3 subunit G
(eIF3g)(Translation initiation factor eIF3 p33 subunit
homolog)(eIF3 p33 homolog)(Eukaryotic translation
initiation factor 3 RNA-binding subunit)(eIF-3
RNA-binding subunit)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B0B3] [Aspergillus
nidulans FGSC A4]
Length = 289
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 41 PPRRGYGGGGGG---YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDY 97
PP G GGG G+ ++ + +L V N+ +ELR FERFG V V+L +D
Sbjct: 185 PPHLRKGAAGGGERMAGKYEKDDLATLRVTNVSELAEEQELRDLFERFGRVTRVFLARDR 244
Query: 98 YTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
T +GFAF+ F D +AA A M+G
Sbjct: 245 ETQRAKGFAFISFADRSDAARACDKMDG 272
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F ++G + +++ P D T +P+GFAFV ++ P A +A
Sbjct: 389 DSGRLFVRNLPYTSTEEDLEKIFAKYGPLSEIHYPIDGLTKKPKGFAFVTYMFPEHAVKA 448
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + VL + +K P E
Sbjct: 449 FAEVDGQVFQGRMLH-VLPSTIKKEPSE 475
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYEA 116
+Q +LVRNIP +E+R F FG ++ V LPK TG RGF FV F+ +A
Sbjct: 815 KQKTSKILVRNIPFQANKQEIRELFSTFGELKTVRLPKKMTGTGPHRGFGFVDFLTKQDA 874
Query: 117 AEA------QHHMNGKRFA 129
A H+ G+R
Sbjct: 875 KRAFNALCHSTHLYGRRLV 893
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V I R ++LR F +FG + DV++P D YTG RGF FV+F + +A +A
Sbjct: 512 SVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAEDAIRD 571
Query: 123 MNGKRFAGREISVVLA 138
M+ K F G I+V A
Sbjct: 572 MDNKEFQGNRITVAAA 587
>gi|431891348|gb|ELK02224.1| Heterogeneous nuclear ribonucleoprotein G [Pteropus alecto]
Length = 278
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+
Sbjct: 121 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAEDAEAA 180
Query: 123 MNGKRF 128
M+G
Sbjct: 181 MDGAEL 186
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L VRN+P E+L F R+G + +++ P D T +P+GFAFV F+ P A +A
Sbjct: 358 DSGRLFVRNLPYTSSEEDLEKLFSRYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKA 417
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ + ++ E+
Sbjct: 418 YAEVDGQVFQGRMLHVLPSTVKKEASED 445
Score = 47.4 bits (111), Expect = 0.007, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 783 RKQTTSKILVRNIPFQADSHEIRELFSTFGELKTVRLPKKVTGTGTHRGFGFVDFLTKQD 842
Query: 116 AAEA------QHHMNGKR----FAGREISVVLAAESRKRPEEMRQ 150
A A H+ G+R +A E+S L A RK E +
Sbjct: 843 AKRAFNALCHSTHLYGRRLVLEWADSEVS--LQALRRKTAEHFHE 885
Score = 38.5 bits (88), Expect = 3.4, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +LV+N+P EL+ F RFG + V LP+ T A V+F++P EA
Sbjct: 541 ERSKTVILVKNLPAGTLAAELQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 594
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 595 KAFRHLAYSKF 605
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P + ++L A F RFG + + ++ D +GFA++Q+V+ A EA
Sbjct: 275 GRLFIRNLPYNASEDDLNAAFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDAAIEAYK 334
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + +L A S+K
Sbjct: 335 QLDGKDFQGRLMH-ILPASSKK 355
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 46 YGGGGGGYGRRKEQNH-------GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY 98
+ G RR+E N ++++N+P +++ + F +G +R V +PK +
Sbjct: 654 HKGMDAAEQRRREDNTKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KF 712
Query: 99 TGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
RGFAF FV EA A + GR + + +E PE+
Sbjct: 713 DRTARGFAFADFVSSREAENAMDALRNTHLLGRRLVLEFVSEEATDPED 761
>gi|448878344|gb|AGE46135.1| arginine/serine-rich splicing factor SCL25A transcript III
[Sorghum bicolor]
Length = 78
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 32/37 (86%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYT 99
SLLVRN+ DCRP++LR PF +FG V+D+YLPKDYYT
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYT 74
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
Q G ++VRNI D + L+ F++FG + V +P RGF F++F EA +
Sbjct: 27 QKEGKVIVRNIQFDLKEPHLKKEFQKFGTIVAVNVPIKNENNLNRGFGFIEFSTKEEAQK 86
Query: 119 AQHHMNGKRFAGREISVVLAAE 140
A MNG+++ GR VLA E
Sbjct: 87 AIDGMNGQKYKGR----VLAVE 104
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|237840719|ref|XP_002369657.1| hypothetical protein TGME49_008970 [Toxoplasma gondii ME49]
gi|211967321|gb|EEB02517.1| hypothetical protein TGME49_008970 [Toxoplasma gondii ME49]
gi|221482873|gb|EEE21204.1| serine/arginine rich splicing factor, putative [Toxoplasma gondii
GT1]
gi|221503334|gb|EEE29032.1| polyadenylate-binding protein, putative [Toxoplasma gondii VEG]
Length = 309
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%)
Query: 50 GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
G G G + + S++ R + ++LR F R V+DVY+P Y T +PRGFAF++
Sbjct: 108 GSGSGEQNKHRRYSVVARGVDRSATQDDLRKFFGRCSDVKDVYIPLHYKTKQPRGFAFIE 167
Query: 110 FVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEM 148
F + + + G F GR + + A EEM
Sbjct: 168 FETEWAMVKVLKQLQGVEFLGRRLMLEEAEGEPSTAEEM 206
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P + ++L A F RFG + + ++ D +GFA++Q+V+ A EA
Sbjct: 275 GRLFIRNLPYNASEDDLNATFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDAAIEAYK 334
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + +L A S+K
Sbjct: 335 QLDGKDFQGRLMH-ILPASSKK 355
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 46 YGGGGGGYGRRKEQNH-------GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY 98
+ G RR+E N ++++N+P +++ + F +G +R V +PK +
Sbjct: 654 HKGMDASEQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KF 712
Query: 99 TGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
RGFAF FV EA A + GR + + +E PE+
Sbjct: 713 DRTARGFAFADFVSSREAENAMDALRNTHLLGRRLVLEFVSEEATDPED 761
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L + + D + L F ++GV+ +V++ ++ T RGF FV F +P +A +A
Sbjct: 3 DEGKLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDA 62
Query: 120 QHHMNGKRFAGREISV 135
MNGK GR I V
Sbjct: 63 LEGMNGKSVDGRTIRV 78
>gi|308450796|ref|XP_003088431.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
gi|308247287|gb|EFO91239.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
Length = 901
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 51/93 (54%)
Query: 55 RRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPY 114
R K G L +RN+P + ++L+ F+++G V +V + D TG +GFA V+FV P
Sbjct: 296 REKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGSCKGFAIVEFVFPE 355
Query: 115 EAAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
A A ++G F GR + ++ E R +P E
Sbjct: 356 AAVAAYSALDGYVFKGRMMHIIAGDEKRDKPTE 388
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L+V+N+P C ++LR FE++G + D L K G+ RGFAFV F+D A+ A
Sbjct: 14 LIVKNLPSTCTEQQLRKFFEKYGKISDASL-KYTKEGKFRGFAFVGFLDEGSASNAIAKS 72
Query: 124 NGKRFAGREISV 135
N F + ++V
Sbjct: 73 NQTFFNSKRLTV 84
Score = 44.3 bits (103), Expect = 0.060, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 55 RRKEQNHGS-LLVRNIPLDCRPEELRAPFERFGVVRDVYLP-KDYYTGEPRGFAFVQFVD 112
++K+Q + LLVRN+P + +E+ FE FG V+ + +P K + RGF FV F+
Sbjct: 769 QKKDQGECTKLLVRNLPFEASIKEVETLFETFGAVKTIRIPRKPGQKQQHRGFGFVDFIS 828
Query: 113 PYEAAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
EA A H+ G+R V+ A+ + EE+R++
Sbjct: 829 ADEARRAFDALVHSTHLYGRRL------VLEWAKEDETVEELREK 867
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L FER+G V DV+ P+D TG+ RGFAFV++ EA +A
Sbjct: 17 SLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFAFVRYKYADEAQKAIDR 76
Query: 123 MNGKRFAGREISVVLA 138
++G+ GR I V A
Sbjct: 77 LDGRDVDGRNIMVQFA 92
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 73 CRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGRE 132
R ++LR F +FG + DV++P D YTG RGF FV+F + +A +A M+ K F G
Sbjct: 764 VRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAEDAIRDMDNKEFQGNR 823
Query: 133 ISVVLA 138
I+V A
Sbjct: 824 ITVAAA 829
>gi|2625130|gb|AAB86639.1| heterogeneous nuclear ribonucleoprotein G [Mus musculus]
Length = 388
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P + ++L A F RFG + + ++ D +GFA++Q+V+ A EA
Sbjct: 276 GRLFIRNLPYNASEDDLSATFSRFGKIEETHVATDTRHSTSKGFAYIQYVESDAAIEAYK 335
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + +L A S+K
Sbjct: 336 QLDGKDFQGRLMH-ILPASSKK 356
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 46 YGGGGGGYGRRKEQNH-------GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY 98
+ G RRKE N ++++N+P +++ + F +G +R V +PK +
Sbjct: 655 HKGMDAAEQRRKEDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KF 713
Query: 99 TGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
RGFAF FV EA A + GR + + +E PE+
Sbjct: 714 DHTARGFAFADFVSSREAENAMDALRNTHLLGRRLVLEFVSEEATDPED 762
>gi|261192142|ref|XP_002622478.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis SLH14081]
gi|239589353|gb|EEQ71996.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis SLH14081]
gi|239615073|gb|EEQ92060.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis ER-3]
gi|327349815|gb|EGE78672.1| eukaryotic translation initiation factor 3 [Ajellomyces
dermatitidis ATCC 18188]
Length = 288
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 41 PPRRGYGGGGGGY---GRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDY 97
PP GG G G G+ + + +L V N+ +E+R FERFG V V+L KD
Sbjct: 184 PPHLRKGGAGAGERMGGKYERDDLATLRVTNVSELAEEQEIRDMFERFGRVTRVFLAKDR 243
Query: 98 YTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
T +GFAF+ F D +AA A M+G
Sbjct: 244 ETNMAKGFAFISFQDRSDAARACEKMDG 271
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c [Taeniopygia
guttata]
Length = 175
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|119608862|gb|EAW88456.1| RNA binding motif protein, X-linked, isoform CRA_b [Homo sapiens]
Length = 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISV 135
MNGK G+ I V
Sbjct: 68 DMNGKSLDGKAIKV 81
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 28 SPPRRGYGGRGRSPPRRGYGGGGGGYGRRKEQ--NHGSLLVRNIPLDCRPEELRAPFERF 85
SP +G RG +P + G G +E + G L VRN+P E+L F +F
Sbjct: 370 SPMAKGPQKRGTTP----WQGRTLGDNEEEEDLADSGRLFVRNLPYTSTEEDLEKLFSKF 425
Query: 86 GVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRP 145
G + +++ P D +P+GFAFV F+ P A +A ++G+ F GR + V+ + ++
Sbjct: 426 GPLSEIHYPIDSLIKKPKGFAFVTFMFPEHAVKAYTEVDGQVFQGRMLHVLPSTIKKEAS 485
Query: 146 EE 147
E+
Sbjct: 486 ED 487
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 826 KKQTTSKILVRNIPFQADSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD 885
Query: 116 AAEA------QHHMNGKRF 128
A A H+ G+R
Sbjct: 886 AKRAFNALCHSTHLYGRRL 904
>gi|108744011|gb|ABG02278.1| heterogeneous nuclear ribonucleoprotein G [Haplochromis burtoni]
Length = 391
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKPIKVEQATK 86
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1 [Taeniopygia
guttata]
Length = 171
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P E+L F ++G + +++ P D T +P+GFAF+ ++ P A +A
Sbjct: 414 GRLFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDRLTKKPKGFAFITYMIPEHAVKAYA 473
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEM 148
M+G+ F GR + ++ + + + E++
Sbjct: 474 EMDGQVFQGRMMHLLPSTIKKLKIEDI 500
Score = 46.6 bits (109), Expect = 0.013, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYEAAEA--- 119
+LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +A +A
Sbjct: 833 ILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQDAKKAFNA 892
Query: 120 ---QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+ G+R V+ A++ + E +R+R
Sbjct: 893 LCHSTHLYGRRL------VLEWADTEETVEALRRR 921
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
+ + G L VRN+P ++L F++ G + +V++P D T +PRG A+V F+ P AA
Sbjct: 323 QDDTGRLFVRNLPFSASEDDLYKLFKKHGDISEVHIPIDRETKKPRGMAYVTFMLPEVAA 382
Query: 118 EAQHHMNGKRFAGREISVVLAAESRKRP 145
+A ++G F GR + ++ A + RP
Sbjct: 383 QAHAALDGSIFQGRLLHIMPAKMAPVRP 410
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++LV+N+ + E+R F FG ++ V +PK G RGFAFV F+ EA A
Sbjct: 746 TILVKNVAFEATKAEIRELFATFGQLKSVRVPKKM-DGRARGFAFVDFITKQEAKNAFQS 804
Query: 123 MNGKRFAGREISV 135
+ GR + +
Sbjct: 805 LQDTHLYGRHLVL 817
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 56 RKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYE 115
+ E++ +LV+NIP + EELR F +FG V V LP R A +++++P E
Sbjct: 511 KVERSKTMILVKNIPHQTKLEELRDMFSKFGSVSRVILP------PARTLALIEYLEPSE 564
Query: 116 A 116
A
Sbjct: 565 A 565
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|449544221|gb|EMD35195.1| hypothetical protein CERSUDRAFT_116663 [Ceriporiopsis subvermispora
B]
Length = 788
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+ C EEL+ F +G + V++P D T +P+G A+V F P A A
Sbjct: 258 GRLFLRNLSYTCTDEELKQLFSPYGEIAQVHIPVDPLTKQPKGLAYVTFAQPSSAVAAFE 317
Query: 122 HMNGKRFAGREISVVLAAESRKRPEE 147
++ F GR + V+ A + R + +E
Sbjct: 318 ALDKASFQGRLLHVLPAVDRRGKEKE 343
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
++V+N+P + +++R F ++ V LP+ + RGFAF++F EAA A +
Sbjct: 675 MIVKNVPFEATKKDIRELFSAHAQLKSVRLPR-KFDHRARGFAFLEFTTHAEAARAYATL 733
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGG 162
GR + V+ AE + + +RQ + G YGG
Sbjct: 734 RHTHLLGRHL-VLEWAEDTQDIDALRQ----KAGVGYGG 767
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L +RN+P + ++L A F RFG + + ++ D +GFA++Q+V+ A EA
Sbjct: 285 GRLFIRNLPYNASEDDLSAAFSRFGKIEETHVAIDTRHSTSKGFAYIQYVESDAAIEAYK 344
Query: 122 HMNGKRFAGREISVVLAAESRK 143
++GK F GR + +L A S+K
Sbjct: 345 QLDGKDFQGRLMH-ILPASSKK 365
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 46 YGGGGGGYGRRKEQNH-------GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY 98
+ G RR+E N ++++N+P +++ + F +G +R V +PK +
Sbjct: 664 HKGMDAAEQRRREDNAKKASAKRTKIIIKNLPFQATKKDIWSLFAAYGQLRSVRVPK-KF 722
Query: 99 TGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEE 147
RGFAF FV EA A + GR + + +E PE+
Sbjct: 723 DRTARGFAFADFVSSREAENAMDALRNTHLLGRRLVLEFVSEEATDPED 771
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|345567860|gb|EGX50762.1| hypothetical protein AOL_s00054g848 [Arthrobotrys oligospora ATCC
24927]
Length = 130
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 36/63 (57%)
Query: 78 LRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVL 137
LR FE FGVV D + KD TG RGF FV+F + EA AQ MN F GR I V
Sbjct: 18 LRQKFEEFGVVEDAIVVKDRDTGRSRGFGFVRFSNDDEATAAQEAMNDAEFDGRRIRVDK 77
Query: 138 AAE 140
A++
Sbjct: 78 ASD 80
>gi|158339748|ref|YP_001520755.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158340644|ref|YP_001521812.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309989|gb|ABW31605.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310885|gb|ABW32498.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+ D +E++A F +G V +V++PKD TG RGFAFV+ + E ++A
Sbjct: 2 SIYVGNLSYDVTQDEIQAVFAEYGAVSNVHVPKDRETGRMRGFAFVELGNDAEESKAIEE 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGG 162
+ G + GR + V ++ RP R RG +++ G
Sbjct: 62 LEGAEWMGRTLKV-----NKARP-----RENNRGNNNFSG 91
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI ++L+ FE FG + V L K+ G +G+ FVQF+DP +A EA M
Sbjct: 322 LYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEE-AGRSKGYGFVQFIDPTQAKEALEKM 380
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYY 168
NG AGR I V L + RF GG + + S +
Sbjct: 381 NGFELAGRPIRVGLGNDKFTPESTQSLLQRFGGGQANAHAQGSSF 425
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V+ + R EL+ FE+ G V D + KD +G +G +V+F + E+ +
Sbjct: 222 TVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEFKEE-ESVQKAIA 280
Query: 123 MNGKRFAGREISVVLAAESRKR 144
+ G++ G I L + R
Sbjct: 281 LTGQKLLGIPIIAQLTEAEKNR 302
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 69 IPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF 128
IP C E++R F +G + VY+P D P+GFAFV F P AA+A +NG+ F
Sbjct: 267 IPSMCTEEKIRELFSLYGEITSVYVPVDE-NEVPKGFAFVNFAKPECAAKAVEELNGRDF 325
Query: 129 AGREISVVLAAESRKRPEEMRQR 151
G+ + V A + +R E+R++
Sbjct: 326 EGKSLYVGRAQKKAEREAELRRK 348
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L VRN+P D E LR F FG + + +D G RGF FV F P EA +A
Sbjct: 364 NLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDD-KGVSRGFGFVCFSTPEEATKAVTE 422
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPR 164
MNGK + + V LA R ++ + R ++ GG R
Sbjct: 423 MNGKMMGKKPLYVCLAQRKEIRQAQLEAQ---RIAAAAGGLR 461
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P C EEL+ F + G + +++ P D T + +GFAF+ ++ P A A
Sbjct: 415 GRLFVRNLPYTCTEEELKELFTKHGPLSEMHFPIDSLTKKSKGFAFITYMIPENAVAALA 474
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRSRS 181
++G F GR + ++ P +++ + S G P SS Y R + S
Sbjct: 475 QLDGHIFQGRMLHLL--------PSTIKKE---KADSDAGAPGSSSYKRQKDAKTKALSS 523
Query: 182 PHH 184
H
Sbjct: 524 NSH 526
Score = 46.2 bits (108), Expect = 0.016, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYEAAEA--- 119
LLVRNIP ELR F FG ++ V LPK TG RGF F+ FV +A +A
Sbjct: 849 LLVRNIPFQASVRELRELFCTFGELKTVRLPKKAAGTGNHRGFGFIDFVTKQDAKKAFDA 908
Query: 120 ---QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
H+ G+R V+ A++ + E +R++
Sbjct: 909 LCHSTHLYGRRL------VLEWADAEETVEALRRK 937
>gi|171690620|ref|XP_001910235.1| hypothetical protein [Podospora anserina S mat+]
gi|170945258|emb|CAP71369.1| unnamed protein product [Podospora anserina S mat+]
Length = 303
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 50 GGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQ 109
GG YG R + +L V N+ ELR FERFG V V+L KD TG +GFAF+
Sbjct: 213 GGKYGER--DDLATLRVTNVSEMAEENELRDMFERFGRVTRVFLAKDRDTGLAKGFAFIS 270
Query: 110 FVDPYEAAEAQHHMNG 125
F D +A +A M+G
Sbjct: 271 FADRGDAVKACAKMDG 286
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|348515473|ref|XP_003445264.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Oreochromis niloticus]
Length = 391
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKPIKVEQATK 86
>gi|392585482|gb|EIW74821.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 834
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L +RN+ C EE+R F+ FG + V++P D T +P+G A+V F + A A +
Sbjct: 295 LFLRNLTFSCTEEEIREHFQPFGNISQVHIPLDSSTRKPKGVAYVTFSEGASALSAYESL 354
Query: 124 NGKRFAGREISVVLAAESRKRPEE 147
+ K F GR + ++ A + +PE+
Sbjct: 355 DKKSFQGRVLHILPAVDRIPKPEQ 378
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Query: 34 YGGRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYL 93
+ GRG+ + G G GR + ++V+N+P + +++R F G ++ V L
Sbjct: 691 FAGRGQEEVGQ-EGKGASSKGRTTK-----MIVKNVPFEASKKDIRELFGAHGQLKSVRL 744
Query: 94 PKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
PK + RGFAF++F+ EA A + GR + + A E + R
Sbjct: 745 PK-KFDSRSRGFAFLEFLTRQEAENAYAALRHTHLLGRHLVLQWAEEDGATDVDAL---R 800
Query: 154 FRGGSSYGG 162
+ G +GG
Sbjct: 801 AKAGVGFGG 809
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + + + L F FG + +V + KD T RGF F+ F DP A++A
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMR 65
Query: 122 HMNGKRFAGREISVVLAAES 141
MNG+ GR+I V A +S
Sbjct: 66 AMNGESLDGRQIRVDHAGKS 85
>gi|356542361|ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 958
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 43 RRGYGGGG------GGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKD 96
R+ GGG GG G + ++ L+VRN+P + E+R F G V DV++P+
Sbjct: 252 RKEIGGGNIWVRQLGGEGSKTQK--WKLIVRNLPFKAKENEIRDMFSSAGCVWDVFIPQK 309
Query: 97 YYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 142
T +GFAFV+F +A +A +NG +FA R I+V A +
Sbjct: 310 TNTDLSKGFAFVKFTCKQDAEKAIQKLNGSKFAKRLIAVDWAVSKK 355
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
KE +L V N+P +L F G VR ++ + + RGF +VQF +A
Sbjct: 13 KEHCSSTLFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQKGSAQHRGFGYVQFAVEEDA 72
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A NG GR+I VV A R EE + +
Sbjct: 73 NRAIELKNGTSVEGRKI-VVKHAMPRPPCEERQSK 106
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI + EE R F +FG V L +D G+ RGF FV F AA+A
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQ-EGKTRGFGFVNFTTHEAAAQA 297
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+++ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 298 VDELNGKDFRGQDLYVGRAQKKHEREEELRK--------SYEAARLEKANKYQGVNLYIK 349
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R Y P+
Sbjct: 350 NLGDDVDDDKLRAMFSEYGPI 370
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G +++V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MAGMNGKTVDGRQIRVDQAGKS 85
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L VRN+P E+L F ++G + D++ P D T +P+GFAFV ++ P A +A
Sbjct: 406 GRLFVRNLPFTSTEEDLEKIFSKYGPLSDIHFPIDRLTKKPKGFAFVTYMIPEHAVKAYA 465
Query: 122 HMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSY 160
++G+ F GR + ++ S R E+++ G SSY
Sbjct: 466 ELDGQVFQGRMMHLL---PSTIRKEKIKDADA-EGSSSY 500
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 821 KKQTTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFLTKQD 880
Query: 116 AAEA------QHHMNGKRFAGREISVVLAAESRKRPEEMRQR 151
A +A H+ G+R V+ A++ + E +R++
Sbjct: 881 AKKAFNALCHSTHLYGRRL------VLEWADTEETVEALRRK 916
>gi|355749288|gb|EHH53687.1| hypothetical protein EGM_14374, partial [Macaca fascicularis]
Length = 148
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L +RN + R ++L F R+G + DVY+P D+YT PRG A+VQ D +A +A H++
Sbjct: 10 LFIRNGANNSRFKDLWHEFGRYGPIVDVYVPLDFYTHCPRGVAYVQLEDVRDAEDALHNL 69
Query: 124 NGKRFAGREISV 135
+ K G ++ +
Sbjct: 70 DRKWICGCQMRI 81
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+ D E+L++ F ++G V V LP D TG PRGF FV E A
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDA 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
+NG + GR++ V ++ RP E R
Sbjct: 62 LNGAEWMGRQLKV-----NKARPREER 83
>gi|229367606|gb|ACQ58783.1| Heterogeneous nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 289
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLNTETTEKALEQYFSKYGGIVEVILMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKPIKVEQATK 86
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SLLV NI ++L F+R+G V D+++P+D TGE RGFAFV++ EA +A
Sbjct: 17 SLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYSDEAQKAIER 76
Query: 123 MNGKRFAGREISV 135
++G+ GR I V
Sbjct: 77 LDGRAVDGRNIVV 89
>gi|293346666|ref|XP_002726404.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 441
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI + +E R FE++G + L D TG+ RGF FV +++ +A +A
Sbjct: 240 NFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAYKA 299
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
+N F G+++ V A + +R EE+R+++
Sbjct: 300 VDELNDSDFHGQKLYVGRAQKKHEREEELRKQYE 333
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI + EE R F +FG V L +D G+ RGF FV F AA+A
Sbjct: 239 NFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQ-EGKSRGFGFVNFTTHEAAAQA 297
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+++ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 298 VDELNGKDFRGQDLYVGRAQKKHEREEELRK--------SYEAARLEKANKYQGVNLYIK 349
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R Y P+
Sbjct: 350 NLGDDVDDDKLRAMFSEYGPI 370
>gi|356546384|ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
Length = 956
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 49 GGGGYGRRKEQNHGS------LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEP 102
GGG R+ GS L++RN+P + E+R F G V DV++P+ TG
Sbjct: 256 GGGNVWARQLGGEGSKTQKWKLIIRNLPFKAKDNEIRDMFSSAGYVWDVFIPQKPDTGLS 315
Query: 103 RGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 142
+GFAFV+F +A +A +NG +FA R I+V A +
Sbjct: 316 KGFAFVKFTCKQDAEKAIQKLNGSKFAKRLIAVDWAVSKK 355
Score = 42.7 bits (99), Expect = 0.18, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
KE +L V N+P +L F + G VR ++ + + RGF +VQF +A
Sbjct: 13 KEHCPSTLFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQHRGFGYVQFAVEEDA 72
Query: 117 AEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSS 159
A NG GR+I V A + P E RQ + G +
Sbjct: 73 NRAIELKNGTSVEGRKIVVKHAMP--RPPREERQSKPNQAGKT 113
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 14/120 (11%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI + ++L+A FE FG + V L KD G RG+ FVQF D +A EA M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE-NGRSRGYGFVQFRDAGQAREALEKM 337
Query: 124 NGKRFAGREISVVL---------AAESRKRPEEMRQRHRFRGGSSYG----GPRSSYYGR 170
NG AGR I V L A +R Q F+G + G GP+SS + R
Sbjct: 338 NGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQNQNFQGSAFSGSGGRGPQSSTFDR 397
>gi|392347178|ref|XP_003749751.1| PREDICTED: RNA binding motif protein, X-linked-like 1 [Rattus
norvegicus]
Length = 446
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + ++ L KD T + RGFAFV F P +A +
Sbjct: 8 GKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVEQATK 86
>gi|302422622|ref|XP_003009141.1| eukaryotic translation initiation factor 3 subunit G [Verticillium
albo-atrum VaMs.102]
gi|261352287|gb|EEY14715.1| eukaryotic translation initiation factor 3 subunit G [Verticillium
albo-atrum VaMs.102]
Length = 297
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVD 112
+G R + +L V N+ +ELR FERFG V V+L KD TG +GFAF+ FVD
Sbjct: 210 FGER--DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFVD 267
Query: 113 PYEAAEAQHHMNG 125
+A +A M+G
Sbjct: 268 RSDAVKACAKMDG 280
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 53 YGRRKEQNHG--SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQF 110
YGR G SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F
Sbjct: 3 YGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
Query: 111 VDPYEAAEAQHHM 123
D +A +A M
Sbjct: 63 HDKRDAEDAMDAM 75
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A
Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 74
Query: 123 MNG 125
M+G
Sbjct: 75 MDG 77
>gi|145252642|ref|XP_001397834.1| eukaryotic translation initiation factor 3 subunit G [Aspergillus
niger CBS 513.88]
gi|224488022|sp|A2R7Z2.1|EIF3G_ASPNC RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|134083387|emb|CAK97380.1| unnamed protein product [Aspergillus niger]
Length = 288
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 30 PRRGYGGRGRS---PPRRGYGGGGGG---YGRRKEQNHGSLLVRNIPLDCRPEELRAPFE 83
P G G G S PP G GGG G+ ++ + +L V N+ ELR FE
Sbjct: 170 PAAGALGAGTSSYVPPHLRKGAAGGGERMAGKYEKDDLATLRVTNVSELAEEGELRDLFE 229
Query: 84 RFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
RFG V V+L +D T +GFAF+ F D +AA A M+G
Sbjct: 230 RFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACEKMDG 271
>gi|346970301|gb|EGY13753.1| eukaryotic translation initiation factor 3 subunit G [Verticillium
dahliae VdLs.17]
Length = 297
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 53 YGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVD 112
+G R + +L V N+ +ELR FERFG V V+L KD TG +GFAF+ FVD
Sbjct: 210 FGER--DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRETGMAKGFAFISFVD 267
Query: 113 PYEAAEAQHHMNG 125
+A +A M+G
Sbjct: 268 RSDAVKACAKMDG 280
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+ LR FE++G + DVY+P+D T E RGFAF++F + A +A
Sbjct: 14 SIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFIRFCYKHHAEDALGA 73
Query: 123 MNGKRFAGREISVVLA 138
++G G E+ V LA
Sbjct: 74 LDGILLDGHELQVQLA 89
>gi|350633722|gb|EHA22087.1| hypothetical protein ASPNIDRAFT_126136 [Aspergillus niger ATCC
1015]
Length = 281
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 30 PRRGYGGRGRS---PPRRGYGGGGGG---YGRRKEQNHGSLLVRNIPLDCRPEELRAPFE 83
P G G G S PP G GGG G+ ++ + +L V N+ ELR FE
Sbjct: 163 PAAGALGAGTSSYVPPHLRKGAAGGGERMAGKYEKDDLATLRVTNVSELAEEGELRDLFE 222
Query: 84 RFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNG 125
RFG V V+L +D T +GFAF+ F D +AA A M+G
Sbjct: 223 RFGRVTRVFLARDRETQRAKGFAFISFADRSDAARACEKMDG 264
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI D E+ R FE+FG V L +D G+ RGF FV F A +A
Sbjct: 238 NFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQ-EGKTRGFGFVNFTTHEAAFKA 296
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+++ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 297 VEELNGKDFRGQDLYVGRAQKKHEREEELRK--------SYEAARLEKANKYQGVNLYIK 348
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R + P+
Sbjct: 349 NLDDDVDDEKLRQMFAEFGPI 369
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N ++ V+NI + +E R FE+FG V L +D G+ RGF FV F AA+A
Sbjct: 240 NFTNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQ-EGKTRGFGFVNFTTHEAAAKA 298
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
+NGK F G+++ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 299 VDDLNGKDFRGQDLYVGRAQKKHEREEELRR--------SYEAARLEKANKYQGVNLYIK 350
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R Y P+
Sbjct: 351 NLGDDVDDEKLRAMFSEYGPI 371
>gi|398398892|ref|XP_003852903.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
gi|339472785|gb|EGP87879.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
Length = 770
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L VRN+P + + E+L+A F +G + +V++P D TG +GF ++QF +P A +A
Sbjct: 249 LFVRNLPFNVQKEDLQAEFASYGNLEEVHVPLDPKTGAGKGFGYIQFSNPDSAEQAFVDR 308
Query: 124 NGKRFAGREISVV 136
+G+ F GR + V+
Sbjct: 309 DGQTFQGRLLHVL 321
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
LL++N+P + +++RA F +G +R V +PK + RGFAF F EA A +
Sbjct: 650 LLIKNLPFEATKKDVRALFGAYGQLRSVRVPKKMNSA-ARGFAFADFTTVKEAQSAMEAL 708
Query: 124 NGKRFAGREISVVLAAE----SRKRPEEMRQR 151
GR + + A+E + E+M+Q+
Sbjct: 709 RDTHLLGRRLVIDFASEDPEDAEAEIEKMQQK 740
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 42/80 (52%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V N+P D EE+ A F G V +V+ P T P GFAFV FV P A A +
Sbjct: 16 LYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLGFAFVTFVLPTAAEAATASL 75
Query: 124 NGKRFAGREISVVLAAESRK 143
+G F GR +SV A + RK
Sbjct: 76 DGASFRGRALSVAAAEKQRK 95
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K+ + L+VRN+ +++ FE FG ++ V LPK + G RGFAFV+F +P +A
Sbjct: 377 KKTSKTKLVVRNLAFAVVVNDVKQLFEAFGALKKVRLPK-RFDGRHRGFAFVEFTNPRDA 435
Query: 117 AEAQHHMNGKRFAGREISV 135
A A+ + GR + +
Sbjct: 436 AAARSSLKSAHLYGRHLVI 454
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 44 RGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPR 103
RGY RR S+LV+N+P D ELR F GVV DV L R
Sbjct: 180 RGYDLDADARSRR------SVLVKNLPADASAAELRKMFAPHGVVHDVLL------APSR 227
Query: 104 GFAFVQFVDPYEAAEAQHHMNGKRF 128
A V+F +P EA A + +RF
Sbjct: 228 TTAVVEFEEPSEARAAFKKLAYRRF 252
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
SL V N+ E+L+ F+++G + D+Y+P+D T E RGFAFV+F + +A +A
Sbjct: 17 SLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDC 76
Query: 123 MNGKRFAGREISVVLA 138
M+ GRE+ V +A
Sbjct: 77 MDRHLLDGREVRVQMA 92
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L V + D + L F ++G + +V + KD T RGF FV F + +A +A
Sbjct: 4 DEGKLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDA 63
Query: 120 QHHMNGKRFAGREISVVLAAES 141
MNGK GR+I V A +S
Sbjct: 64 MMAMNGKSVDGRQIRVDQAGKS 85
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 38 GRSPPRRGYGGGGGGYGRRKEQ----NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYL 93
R PP+ G G +E+ + G L VRN+ E+L F +G + +++
Sbjct: 372 ARGPPKSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHY 431
Query: 94 PKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPEEMRQRHR 153
P D T +P+GFAFV F+ P A +A ++G+ F GR + V+ + ++ +E
Sbjct: 432 PIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVLPSTIKKEASQEA----- 486
Query: 154 FRGGSSYGGPRSSYYGRYRSRSLSRSRSPHH 184
P SSY + + + S S H+
Sbjct: 487 -------NAPGSSYKKKKEAMDKANSSSSHN 510
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 819 KKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQD 878
Query: 116 AAEA------QHHMNGKRF 128
A +A H+ G+R
Sbjct: 879 AKKAFNALCHSTHLYGRRL 897
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + + + L F FG + +V + KD T RGF F+ F +P A++A
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 122 HMNGKRFAGREISVVLAAES 141
MNG+ GR+I V A +S
Sbjct: 66 AMNGESLDGRQIRVDHAGKS 85
>gi|427417097|ref|ZP_18907280.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425759810|gb|EKV00663.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 91
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V N+ D E++ A F +G V+ V+LP D TG PRGFAFV+ E A
Sbjct: 2 SIYVGNLSYDATQEDINAVFAEYGTVQRVHLPTDRETGRPRGFAFVEMSSEDEETSAIEA 61
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
++G + GR++ V ++ RP E R
Sbjct: 62 LDGAEWMGRDLRV-----NKARPREQR 83
>gi|395815171|ref|XP_003781108.1| PREDICTED: RNA-binding motif protein, X-linked-like-2 [Otolemur
garnettii]
Length = 393
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L A F ++G + +V L KD T + RGFAFV F P +A A
Sbjct: 8 GKLFIGGLNPETDEKALEAAFGKYGRIVEVLLMKDRETSKSRGFAFVTFESPADAKAAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 DMNGKSLDGKAIKVAQATK 86
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 49 GGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFV 108
G G +K+ +G ++V+N+P + +++ F FG ++ V +PK + RGFAFV
Sbjct: 725 GNAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFV 783
Query: 109 QFVDPYEAAEAQHHMNGKRFAGR 131
+FV P EA A + G GR
Sbjct: 784 EFVLPKEAENAMDQLQGVHLLGR 806
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
K Q G L +RNI ++ + F +G +++V++ D TG +GFA+V F P EA
Sbjct: 320 KIQKTGRLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEA 379
Query: 117 AEAQHHMNGKRFAGREISVVLAAESR 142
+A ++ + F GR + ++ A E +
Sbjct: 380 VQAYIELDKQIFQGRLLHILAADEMK 405
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V N+ + EELR+ FE FG V V + +D TG RGFAFV+ D A A
Sbjct: 2 NIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAE 61
Query: 123 MNGKRFAGREISV 135
MNGK GR + V
Sbjct: 62 MNGKDLKGRNLVV 74
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + D + L F FG + +V + KD T RGF F+ F +P A++A
Sbjct: 6 GKLFVGGLNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMR 65
Query: 122 HMNGKRFAGREISVVLAAES 141
MNG+ GR+I V A +S
Sbjct: 66 AMNGESVDGRQIRVDHAGKS 85
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
N+ ++ ++NI L+ EE R F ++G + L +D G+PRGF FV + AA+
Sbjct: 247 NYTNVYIKNINLEVTEEEFREFFSKWGEITSSTLARDA-EGKPRGFGFVNYSTHASAAKC 305
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEEMRQRHRFRGGSSYGGPRSSYYGRYRSRSLSRS 179
MNGK + G+E+ V A + +R EE+R+ SY R +Y+ +L
Sbjct: 306 VEEMNGKEWRGQELYVGRAQKKHEREEELRK--------SYEAARLEKQNKYQGVNLYIK 357
Query: 180 RSPHHPQGSRSRYRSRSYTPV 200
+ R + P+
Sbjct: 358 NLSDEVDDEKLRAMFAEFGPI 378
>gi|336257891|ref|XP_003343767.1| hypothetical protein SMAC_04425 [Sordaria macrospora k-hell]
gi|380091605|emb|CCC10737.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 344
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V I E+ FE++G V + KD +TGE RGF FV+ V P +A A+
Sbjct: 75 NLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMVTPEQAQAAKDG 134
Query: 123 MNGKRFAGREISVVLAAESRKR 144
+ G+ GR +S+ +A +R R
Sbjct: 135 LQGEVIEGRTLSIEMARRARPR 156
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans ND132]
Length = 87
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
++ V N+P E++RA FE FG V V L D TG PRGF FV+ +D A A
Sbjct: 4 NIYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETGRPRGFGFVE-MDDQGALAAIES 62
Query: 123 MNGKRFAGREISVVLAAESRKRPE 146
++G F GR + V E+R RPE
Sbjct: 63 LDGSDFGGRNLKV---NEARPRPE 83
>gi|339239767|ref|XP_003375809.1| FUS-interacting serine-arginine-rich protein 1 [Trichinella
spiralis]
gi|316975513|gb|EFV58946.1| FUS-interacting serine-arginine-rich protein 1 [Trichinella
spiralis]
Length = 84
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
Q + SL +RN+P + R +ELRA F ++G VRDVY+P DYYT P Q D A +
Sbjct: 6 QPNVSLYIRNVPYEARDDELRAMFSKYGPVRDVYIPLDYYTRRP------QLKD---AED 56
Query: 119 AQHHMNGKRFAGREISVVLAAESRK 143
A + ++ R+ G ++ V A RK
Sbjct: 57 ALYALDRVRYHGSDLEVEFAKGDRK 81
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 190
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L V + + + L F FG + +V + KD T RGF F+ F +P A++A
Sbjct: 6 GKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMR 65
Query: 122 HMNGKRFAGREISVVLAAES 141
MNG+ GR+I V A +S
Sbjct: 66 AMNGESLDGRQIRVDHAGKS 85
>gi|332870645|ref|XP_003319027.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 1 [Pan troglodytes]
Length = 497
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLA------AESRKRP 145
A MNGK G+ I V A ++ R+RP
Sbjct: 62 KNAAKDMNGKSLDGKAIKVEQAKKPSFQSDCRRRP 96
>gi|332870647|ref|XP_003319028.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J-like isoform 2 [Pan troglodytes]
Length = 460
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLA------AESRKRP 145
A MNGK G+ I V A ++ R+RP
Sbjct: 62 KNAAKDMNGKSLDGKAIKVEQAKKPSFQSDCRRRP 96
>gi|156554617|ref|XP_001604889.1| PREDICTED: RNA-binding protein 45-like isoform 1 [Nasonia
vitripennis]
gi|345493454|ref|XP_003427077.1| PREDICTED: RNA-binding protein 45-like isoform 2 [Nasonia
vitripennis]
Length = 489
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 76 EELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRF--AGREI 133
EELR FE+FG + D+++ KD TGE +G ++++ +AA A MNGK GR I
Sbjct: 40 EELRKAFEKFGNIEDIWVVKDRNTGENKGVTYIKYAKTSQAAFALEEMNGKMLSSVGRPI 99
Query: 134 SVVLAA 139
V++A+
Sbjct: 100 KVMIAS 105
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 51/88 (57%)
Query: 60 NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEA 119
+ G L +RN+P E+L+ F +FG + +++ P D T +P+GFAFV F+ P A A
Sbjct: 403 DSGRLFIRNLPYTSTEEDLQRLFSKFGPLSELHYPIDSLTKKPKGFAFVTFIFPEHAVRA 462
Query: 120 QHHMNGKRFAGREISVVLAAESRKRPEE 147
++G+ F GR + V+ + ++ E+
Sbjct: 463 YAEVDGQVFQGRMLHVLPSTIKKEASED 490
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
++Q +LVRNIP E++ F FG ++ V LPK TG RGF FV F+ +
Sbjct: 829 RKQTTSKILVRNIPFQADKREIQELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQD 888
Query: 116 AAEA------QHHMNGKR----FAGREISVVLAAESRKRPEEMRQ 150
A A H+ G+R +A E+S L A RK E +
Sbjct: 889 AKRAFQALCHSTHLYGRRLVLEWADSEVS--LQALRRKTAEHFHE 931
>gi|114691838|ref|XP_001139951.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes]
gi|114691958|ref|XP_001136088.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 3 [Pan troglodytes verus]
gi|410060470|ref|XP_003949299.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J [Pan troglodytes verus]
Length = 497
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLAAE 140
A MNGK G+ I V A +
Sbjct: 62 KNAAKDMNGKSLDGKAIKVEQAKK 85
>gi|389635291|ref|XP_003715298.1| eukaryotic translation initiation factor 3 subunit G [Magnaporthe
oryzae 70-15]
gi|351647631|gb|EHA55491.1| eukaryotic translation initiation factor 3 subunit G [Magnaporthe
oryzae 70-15]
Length = 324
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 59 QNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAE 118
+ +L V N+ +ELR FERFG V V+L KD TG +GFAF+ F D +A +
Sbjct: 241 DDLATLRVTNVSEMAEEQELRDMFERFGRVTRVFLAKDRDTGLAKGFAFISFADREDAVK 300
Query: 119 AQHHMNGKRF 128
A + M+G F
Sbjct: 301 ACNKMDGWGF 310
>gi|259155082|ref|NP_001158783.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
gi|223647384|gb|ACN10450.1| Heterogeneous nuclear ribonucleoprotein G [Salmo salar]
Length = 290
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G L + + + + L F ++G + +V L KD T + RGFAFV F P +A +A
Sbjct: 8 GKLFIGGLDTETNEKALEKHFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAAR 67
Query: 122 HMNGKRFAGREISVVLAAE 140
MNGK G+ I V A +
Sbjct: 68 EMNGKSLDGKPIKVEQATK 86
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHM 123
L V NI + ++L+A FE FG + V L KD G RG+ FVQF D +A EA M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDE-NGRSRGYGFVQFRDAGQAREALEKM 337
Query: 124 NGKRFAGREISVVLAAESRKRPEEMRQRHRFRG------GSSYG-----GPRSSYYGR 170
NG AGR I V L + RF G GS++ GP+SS + R
Sbjct: 338 NGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQNQSFQGSAFSGAGGRGPQSSTFDR 395
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 36 GRGRSPPRRGYGGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPK 95
GRGR RR G E++ ++ V+ + R EL+ FE+ G V + + K
Sbjct: 152 GRGRDDDRREPKRDGTPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVK 211
Query: 96 DYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKR 144
D + +G +V+F + +A + G++ G + V + + R
Sbjct: 212 DRISQRSKGVGYVEFKNEESVTQA-LQLTGQKLLGIPVIVQVTEAEKNR 259
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
+L V I D +LR FE +G +R V + KD TG+PRG+AFV+F + A
Sbjct: 105 TLFVSRINYDTTESKLRREFETYGKIRKVTIVKDVATGKPRGYAFVEFDRERDMHTAYKS 164
Query: 123 MNGKRFAGREISVVL 137
+GK+ GR + V +
Sbjct: 165 ADGKKIDGRRVLVDV 179
>gi|242013547|ref|XP_002427466.1| RNA binding motif protein, putative [Pediculus humanus corporis]
gi|212511852|gb|EEB14728.1| RNA binding motif protein, putative [Pediculus humanus corporis]
Length = 846
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 62 GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQH 121
G + +RN+P EL+ FE++G V + LP D +T +P+GF V ++ P A +A +
Sbjct: 334 GRIFIRNLPYTVTENELKEVFEKYGPVIEFILPIDSFTRKPKGFGIVTYLIPEHACKAYN 393
Query: 122 HMNGKRFAGREISVV 136
++G F+GR + ++
Sbjct: 394 ELDGTIFSGRMLHLL 408
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 64 LLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQF 110
+LVRN+P E+ F+ FG ++ + LPK +G RGF FV++
Sbjct: 749 ILVRNVPFQATKREIGDLFKVFGEIKAIRLPKKLVGSGSHRGFCFVEY 796
>gi|47225344|emb|CAG09844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 570
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 63 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHH 122
S+ V NIP + E+L+ F G+V L D TG+P+G+ F ++ D A A +
Sbjct: 27 SVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 86
Query: 123 MNGKRFAGREISVVLAAESRKRPEEMR 149
+NG+ F+GR + V AA S K EE++
Sbjct: 87 LNGREFSGRALRVDNAA-SEKNKEELK 112
>gi|54633344|ref|NP_001006121.1| RNA-binding motif protein, Y chromosome, family 1 member B [Homo
sapiens]
gi|190360159|sp|A6NDE4.2|RBY1B_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member B
Length = 496
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLAAE 140
A MNGK G+ I V A +
Sbjct: 62 KNAAKDMNGKSLHGKAIKVEQAKK 85
>gi|56090533|ref|NP_001006120.2| RNA-binding motif protein, Y chromosome, family 1 member D [Homo
sapiens]
gi|190360153|sp|P0C7P1.1|RBY1D_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member D
Length = 496
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLAAE 140
A MNGK G+ I V A +
Sbjct: 62 KNAAKDMNGKSLHGKAIKVEQAKK 85
>gi|114691840|ref|XP_001139693.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes]
gi|114691960|ref|XP_001135842.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
F/J isoform 1 [Pan troglodytes verus]
Length = 460
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKTLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLA------AESRKRP 145
A MNGK G+ I V A ++ R+RP
Sbjct: 62 KNAAKDMNGKSLDGKAIKVEQAKKPSFQSDGRRRP 96
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 38 GRSPPRRGYGGGGGGYGRRKEQ----NHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYL 93
R PP+ G G +E+ + G L VRN+ E+L F +G + +++
Sbjct: 10 ARGPPKSTTPWQGRTLGENEEEEDLADSGRLFVRNLSYTSSEEDLEKLFSAYGPLSELHY 69
Query: 94 PKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVV 136
P D T +P+GFAFV F+ P A +A ++G+ F GR + V+
Sbjct: 70 PIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRMLHVL 112
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 57 KEQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYY-TGEPRGFAFVQFVDPYE 115
K+Q +LVRNIP E+R F FG ++ V LPK TG RGF FV F+ +
Sbjct: 457 KKQTTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQD 516
Query: 116 AAEA------QHHMNGKR----FAGREISV 135
A +A H+ G+R +A E++V
Sbjct: 517 AKKAFNALCHSTHLYGRRLVLEWADSEVTV 546
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 58 EQNHGSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAA 117
E++ +L +N+P E++ F RFG + V LP+ T A V+F++P EA
Sbjct: 218 ERSKTVILAKNLPAGTLAAEIQETFSRFGSLGRVLLPEGGIT------AIVEFLEPLEAR 271
Query: 118 EAQHHMNGKRF 128
+A H+ +F
Sbjct: 272 KAFRHLAYSKF 282
>gi|4826974|ref|NP_005049.1| RNA-binding motif protein, Y chromosome, family 1 member A1 [Homo
sapiens]
gi|378522864|sp|P0DJD3.1|RBY1A_HUMAN RecName: Full=RNA-binding motif protein, Y chromosome, family 1
member A1; AltName: Full=RNA-binding motif protein 1;
AltName: Full=RNA-binding motif protein 2; AltName:
Full=Y chromosome RNA recognition motif 1; Short=hRBMY
gi|452367|emb|CAA53659.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 58 EQNH-GSLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEA 116
E +H G L + + + + L+A F + G + +V L KD T + RGFAF+ F +P +A
Sbjct: 3 EADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADA 61
Query: 117 AEAQHHMNGKRFAGREISVVLAAE 140
A MNGK G+ I V A +
Sbjct: 62 KNAAKDMNGKSLHGKAIKVEQAKK 85
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,656,865,152
Number of Sequences: 23463169
Number of extensions: 283068739
Number of successful extensions: 1358931
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11047
Number of HSP's successfully gapped in prelim test: 13999
Number of HSP's that attempted gapping in prelim test: 1209828
Number of HSP's gapped (non-prelim): 110354
length of query: 299
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 158
effective length of database: 9,050,888,538
effective search space: 1430040389004
effective search space used: 1430040389004
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 76 (33.9 bits)