BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043447
(65 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224130614|ref|XP_002328333.1| predicted protein [Populus trichocarpa]
gi|222838048|gb|EEE76413.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 30/37 (81%)
Query: 29 RMIGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
R+I QPLIFDHAAQFF +D RF +LVD WLE+GLV
Sbjct: 140 RVIDPQPLIFDHAAQFFTVSDPRFSELVDDWLEKGLV 176
>gi|18396966|ref|NP_566235.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|6175169|gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana]
gi|15215628|gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana]
gi|28416461|gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis thaliana]
gi|332640593|gb|AEE74114.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 486
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 29 RMIGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
R+I Q LIFDHAAQFF +DSRF KLVD WLE+GLV
Sbjct: 135 RIIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGLV 171
>gi|297828968|ref|XP_002882366.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297328206|gb|EFH58625.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/37 (72%), Positives = 30/37 (81%)
Query: 29 RMIGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
R+I Q LIFDHAAQFF +DSRF KLVD WLE+GLV
Sbjct: 135 RIIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGLV 171
>gi|255580905|ref|XP_002531271.1| conserved hypothetical protein [Ricinus communis]
gi|223529104|gb|EEF31084.1| conserved hypothetical protein [Ricinus communis]
Length = 467
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 48/111 (43%)
Query: 3 RRRSSYGSPRRSALKKAVTRVELWL----------------------------------- 27
R++SSYG+ RRS LKK ++ ++
Sbjct: 59 RKKSSYGTSRRSVLKKTFSQEQVNFSFPVSDDPHVGIIGGGMAGLVCAVNLEKRGVKSTV 118
Query: 28 ---------GRM----IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
GRM I QPL+FDHAAQFF +D +F +LVD WLE+GL+
Sbjct: 119 FDTGNHGLGGRMGTRVIDPQPLVFDHAAQFFTVSDPQFAQLVDGWLEKGLI 169
>gi|225463946|ref|XP_002268010.1| PREDICTED: uncharacterized protein LOC100241002 [Vitis vinifera]
Length = 467
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 28/37 (75%)
Query: 29 RMIGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
RMI Q LIFDHAAQFF D RF +LVD WLE+GLV
Sbjct: 116 RMIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLV 152
>gi|296087896|emb|CBI35179.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 28/37 (75%)
Query: 29 RMIGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
RMI Q LIFDHAAQFF D RF +LVD WLE+GLV
Sbjct: 116 RMIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLV 152
>gi|147823105|emb|CAN66332.1| hypothetical protein VITISV_000600 [Vitis vinifera]
Length = 463
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 28/37 (75%)
Query: 29 RMIGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
RMI Q LIFDHAAQFF D RF +LVD WLE+GLV
Sbjct: 4 RMIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGLV 40
>gi|242086110|ref|XP_002443480.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
gi|241944173|gb|EES17318.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
Length = 507
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 10 SPRRSALKKAVTRVELWL--------GRMI-----GSQPLIFDHAAQFFMPNDSRFRKLV 56
+P SA + + WL GRM G + L+FDHAAQFF +D RF+ +V
Sbjct: 117 TPATSAGGRLTAQARYWLMQGMHGLGGRMATRFVDGGEQLVFDHAAQFFTASDERFQSMV 176
Query: 57 DCWLERGLV 65
D WL+RGLV
Sbjct: 177 DEWLDRGLV 185
>gi|449483109|ref|XP_004156495.1| PREDICTED: uncharacterized protein LOC101226129 [Cucumis sativus]
Length = 536
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 48/111 (43%)
Query: 3 RRRSSYGSPRRSALKKAVTRVELWL----------------------------------- 27
RR+SSYG+ RRS LKK + ++
Sbjct: 69 RRKSSYGTSRRSILKKTFNQEQVTFTSALSDDPLIAIIGGGMAGIMCALSLEKRGVRSTV 128
Query: 28 ---------GRM----IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
GRM +G +PL+FDHAAQFF D++F +LVD WL LV
Sbjct: 129 FDTGIHGLGGRMGTRSLGPEPLMFDHAAQFFTVTDNQFAQLVDGWLAADLV 179
>gi|449443231|ref|XP_004139383.1| PREDICTED: uncharacterized protein LOC101219713 [Cucumis sativus]
Length = 545
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 48/111 (43%)
Query: 3 RRRSSYGSPRRSALKKAVTRVELWL----------------------------------- 27
RR+SSYG+ RRS LKK + ++
Sbjct: 69 RRKSSYGTSRRSILKKTFNQEQVTFTSALSDDPLIAIIGGGMAGIMCALSLEKRGVRSTV 128
Query: 28 ---------GRM----IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
GRM +G +PL+FDHAAQFF D++F +LVD WL LV
Sbjct: 129 FDTGIHGLGGRMGTRSLGPEPLMFDHAAQFFTVTDNQFAQLVDGWLAADLV 179
>gi|414868815|tpg|DAA47372.1| TPA: hypothetical protein ZEAMMB73_111446 [Zea mays]
Length = 210
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 32 GSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
G + L+FDHAAQFF +D RF++LV+ WL+RGLV
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLV 151
>gi|357116570|ref|XP_003560053.1| PREDICTED: uncharacterized protein LOC100824134 [Brachypodium
distachyon]
Length = 477
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQFF +D RF+KLV+ W+ERGLV
Sbjct: 125 LVFDHAAQFFTASDERFQKLVEEWVERGLV 154
>gi|414868817|tpg|DAA47374.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 266
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 32 GSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
G + L+FDHAAQFF +D RF++LV+ WL+RGLV
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLV 151
>gi|414868816|tpg|DAA47373.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 384
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 32 GSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
G + L+FDHAAQFF +D RF++LV+ WL+RGLV
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLV 151
>gi|226530158|ref|NP_001140386.1| uncharacterized protein LOC100272440 [Zea mays]
gi|223973745|gb|ACN31060.1| unknown [Zea mays]
Length = 505
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 32 GSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
G + L+FDHAAQFF +D RF++LV+ WL+RGLV
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGLV 151
>gi|326493132|dbj|BAJ85027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQFF +D RF+KLVD W+E+GL
Sbjct: 118 LVFDHAAQFFTASDRRFQKLVDEWVEKGLA 147
>gi|108862915|gb|ABG22072.1| expressed protein [Oryza sativa Japonica Group]
Length = 456
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 14/71 (19%)
Query: 9 GSPRRSALKKA--------------VTRVELWLGRMIGSQPLIFDHAAQFFMPNDSRFRK 54
G R+SA+KK+ TR G Q L+FDHAAQFF +D RF++
Sbjct: 63 GFSRQSAIKKSFHQEQGMHGLGGRMATRAIAAAGDQQQQQQLVFDHAAQFFTASDERFKR 122
Query: 55 LVDCWLERGLV 65
+VD W+++GLV
Sbjct: 123 VVDEWMDKGLV 133
>gi|115489414|ref|NP_001067194.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|77556443|gb|ABA99239.1| expressed protein [Oryza sativa Japonica Group]
gi|113649701|dbj|BAF30213.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|215701342|dbj|BAG92766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 497
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQFF +D RF+++VD W+++GLV
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLV 174
>gi|125537277|gb|EAY83765.1| hypothetical protein OsI_38983 [Oryza sativa Indica Group]
Length = 497
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQFF +D RF+++VD W+++GLV
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGLV 174
>gi|222617407|gb|EEE53539.1| hypothetical protein OsJ_36748 [Oryza sativa Japonica Group]
Length = 481
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQFF +D RF+++VD W+++GLV
Sbjct: 129 LVFDHAAQFFTASDERFKRVVDEWMDKGLV 158
>gi|168008463|ref|XP_001756926.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691797|gb|EDQ78157.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L FDHAAQ+F +D +FRKLVD W++ G V
Sbjct: 91 LTFDHAAQYFTVSDPKFRKLVDRWIDEGAV 120
>gi|302804250|ref|XP_002983877.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
gi|300148229|gb|EFJ14889.1| hypothetical protein SELMODRAFT_119146 [Selaginella moellendorffii]
Length = 434
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQ+F D F+KLVD WL G V
Sbjct: 86 LVFDHAAQYFTVKDPMFQKLVDQWLSEGAV 115
>gi|302754734|ref|XP_002960791.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
gi|300171730|gb|EFJ38330.1| hypothetical protein SELMODRAFT_73844 [Selaginella moellendorffii]
Length = 434
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L+FDHAAQ+F D F+KLVD WL G V
Sbjct: 86 LVFDHAAQYFTVKDPMFQKLVDQWLSEGAV 115
>gi|283779092|ref|YP_003369847.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
gi|283437545|gb|ADB15987.1| DNA photolyase FAD-binding protein [Pirellula staleyi DSM 6068]
Length = 824
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 33 SQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
S+ L FDH AQ+F D R ++L + W E+G++
Sbjct: 524 SEGLAFDHGAQYFTARDERVQRLAESWAEQGII 556
>gi|354566242|ref|ZP_08985415.1| amine oxidase [Fischerella sp. JSC-11]
gi|353546750|gb|EHC16198.1| amine oxidase [Fischerella sp. JSC-11]
Length = 327
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 37 IFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
IFD+ AQ+F D +F+ LV+ W++ G+V
Sbjct: 60 IFDYGAQYFTAQDPKFQALVNSWIQEGIV 88
>gi|406832394|ref|ZP_11091988.1| DNA photolyase FAD-binding protein [Schlesneria paludicola DSM
18645]
Length = 368
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGL 64
L FDH AQ+F D F LV W+ERG+
Sbjct: 88 LEFDHGAQYFTVTDPLFEPLVQSWIERGI 116
>gi|297624962|ref|YP_003706396.1| amine oxidase [Truepera radiovictrix DSM 17093]
gi|297166142|gb|ADI15853.1| amine oxidase [Truepera radiovictrix DSM 17093]
Length = 333
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 31 IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERG 63
+G+ DH AQ+F D+RFR+ V+ WL G
Sbjct: 51 MGASETPVDHGAQYFTARDARFREQVEAWLAEG 83
>gi|114707631|ref|ZP_01440526.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
gi|114536875|gb|EAU40004.1| putative transmembrane protein [Fulvimarina pelagi HTCC2506]
Length = 282
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 19/30 (63%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L FDH AQFF D RF K V+ W+E G V
Sbjct: 13 LQFDHGAQFFTARDPRFAKRVEGWVEAGHV 42
>gi|307110486|gb|EFN58722.1| hypothetical protein CHLNCDRAFT_16675, partial [Chlorella
variabilis]
Length = 406
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 28 GRMIGSQP-LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
G + G+ P L+FDHA Q+F F+++VD W G+V
Sbjct: 60 GSLRGAPPGLLFDHACQYFTATHPSFQQIVDEWQAAGVV 98
>gi|87306827|ref|ZP_01088973.1| amine oxidase, flavin-containing [Blastopirellula marina DSM
3645]
gi|87290200|gb|EAQ82088.1| amine oxidase, flavin-containing [Blastopirellula marina DSM
3645]
Length = 326
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 36 LIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
L FDH AQ+F D RF++ V+ W+ G++
Sbjct: 46 LHFDHGAQYFTARDPRFQRQVEAWVAAGVI 75
>gi|417302748|ref|ZP_12089836.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
gi|327540991|gb|EGF27547.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica WH47]
Length = 837
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 38 FDHAAQFFMPNDSRFRKLVDCWLERGLV 65
FDH AQ+F D RF + V W+++GLV
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLV 548
>gi|440716033|ref|ZP_20896552.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
gi|436438979|gb|ELP32478.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SWK14]
Length = 837
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 38 FDHAAQFFMPNDSRFRKLVDCWLERGLV 65
FDH AQ+F D RF + V W+++GLV
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLV 548
>gi|444915214|ref|ZP_21235350.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
gi|444713796|gb|ELW54688.1| amine oxidase, flavin-containing [Cystobacter fuscus DSM 2262]
Length = 338
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 38 FDHAAQFFMPNDSRFRKLVDCWLERGLV 65
FDH AQ+F D F++ V+ W+E+G+
Sbjct: 63 FDHGAQYFTARDEGFQRQVETWVEQGIA 90
>gi|32475803|ref|NP_868797.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH 1]
gi|32446346|emb|CAD76174.1| probable deoxyribodipyrimidine photolyase [Rhodopirellula baltica
SH 1]
Length = 837
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 38 FDHAAQFFMPNDSRFRKLVDCWLERGLV 65
FDH AQ+F D RF + V W+++GLV
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLV 548
>gi|421612943|ref|ZP_16054037.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
gi|408496253|gb|EKK00818.1| deoxyribodipyrimidine photolyase [Rhodopirellula baltica SH28]
Length = 837
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 38 FDHAAQFFMPNDSRFRKLVDCWLERGLV 65
FDH AQ+F D RF + V W+++GLV
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLV 548
>gi|449136587|ref|ZP_21771963.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
gi|448884760|gb|EMB15236.1| deoxyribodipyrimidine photolyase [Rhodopirellula europaea 6C]
Length = 837
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 38 FDHAAQFFMPNDSRFRKLVDCWLERGLV 65
FDH AQ+F D RF + V W+++GLV
Sbjct: 521 FDHGAQYFTVRDDRFARHVRSWIQQGLV 548
>gi|260802418|ref|XP_002596089.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
gi|229281343|gb|EEN52101.1| hypothetical protein BRAFLDRAFT_118054 [Branchiostoma floridae]
Length = 401
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 31 IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
+G + +FDH+AQ+F +D+RF K+V +G V
Sbjct: 55 VGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAV 89
>gi|406907712|gb|EKD48458.1| hypothetical protein ACD_64C00303G0001 [uncultured bacterium]
Length = 675
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 6 SSYGSPRRSALKKAVTR-VELWLGRMIGSQPLIFDHAAQFFMPNDSRF 52
SS S +S + A+T +L++GR G++PL F+ A FF DS+F
Sbjct: 69 SSMTSTVKSDAEWAITEYADLYIGRNQGNEPLYFEDATSFFKFEDSKF 116
>gi|260802416|ref|XP_002596088.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
gi|229281342|gb|EEN52100.1| hypothetical protein BRAFLDRAFT_118055 [Branchiostoma floridae]
Length = 401
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 31 IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
+G + +FDH+AQ+F +D+RF K+V +G V
Sbjct: 55 VGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAV 89
>gi|383763945|ref|YP_005442927.1| hypothetical protein CLDAP_29900 [Caldilinea aerophila DSM 14535
= NBRC 104270]
gi|381384213|dbj|BAM01030.1| hypothetical protein CLDAP_29900 [Caldilinea aerophila DSM 14535
= NBRC 104270]
Length = 340
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 39 DHAAQFFMPNDSRFRKLVDCWLERGLV 65
DH AQFF D+RF + V+ WL G++
Sbjct: 60 DHGAQFFTVRDARFGRFVEQWLSEGII 86
>gi|315500506|ref|YP_004089308.1| amine oxidase [Asticcacaulis excentricus CB 48]
gi|315418518|gb|ADU15157.1| amine oxidase [Asticcacaulis excentricus CB 48]
Length = 314
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 37 IFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
+FDH AQ+F D RF VD W GL
Sbjct: 54 LFDHGAQYFTVRDPRFVSQVDAWTHEGLA 82
>gi|260802390|ref|XP_002596075.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
gi|229281329|gb|EEN52087.1| hypothetical protein BRAFLDRAFT_118062 [Branchiostoma floridae]
Length = 276
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 31 IGSQPLIFDHAAQFFMPNDSRFRKLVDCWLERGLV 65
+G + +FDH+AQ+F +D+RF K+V +G V
Sbjct: 55 VGGKTFLFDHSAQYFTVSDNRFAKIVSFLHAKGAV 89
>gi|294055434|ref|YP_003549092.1| fumarate reductase/succinate dehydrogenase flavoprotein
domain-containing protein [Coraliomargarita akajimensis
DSM 45221]
gi|293614767|gb|ADE54922.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
protein [Coraliomargarita akajimensis DSM 45221]
Length = 326
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 39 DHAAQFFMPNDSRFRKLVDCWLERGLV 65
DH AQFF + RFR VD WL G++
Sbjct: 55 DHGAQFFTVREQRFRGYVDEWLNAGVI 81
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.139 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 984,134,232
Number of Sequences: 23463169
Number of extensions: 28068055
Number of successful extensions: 66412
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 66352
Number of HSP's gapped (non-prelim): 61
length of query: 65
length of database: 8,064,228,071
effective HSP length: 37
effective length of query: 28
effective length of database: 7,196,090,818
effective search space: 201490542904
effective search space used: 201490542904
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)