Query 043449
Match_columns 118
No_of_seqs 201 out of 1086
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:29:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043449.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043449hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9c_A Caffeic acid O-methyltr 99.9 1.5E-23 5E-28 155.7 10.1 112 6-117 132-243 (364)
2 4a6d_A Hydroxyindole O-methylt 99.9 3E-24 1E-28 158.8 5.2 108 8-116 110-220 (353)
3 3reo_A (ISO)eugenol O-methyltr 99.9 3E-23 1E-27 154.1 10.0 113 5-117 133-245 (368)
4 1fp1_D Isoliquiritigenin 2'-O- 99.8 7.1E-21 2.4E-25 141.1 10.2 111 7-117 140-251 (372)
5 3lst_A CALO1 methyltransferase 99.8 2.6E-21 8.8E-26 142.4 7.4 106 7-113 117-222 (348)
6 1zg3_A Isoflavanone 4'-O-methy 99.8 6.1E-21 2.1E-25 140.8 7.8 109 7-117 121-235 (358)
7 3gwz_A MMCR; methyltransferase 99.8 3E-21 1E-25 143.2 5.8 109 7-116 135-243 (369)
8 1fp2_A Isoflavone O-methyltran 99.8 8.6E-21 3E-25 139.7 7.8 107 8-116 120-229 (352)
9 3i53_A O-methyltransferase; CO 99.8 2.4E-21 8.1E-26 141.5 4.3 105 10-115 104-209 (332)
10 2ip2_A Probable phenazine-spec 99.8 6.1E-20 2.1E-24 133.9 6.1 101 12-115 107-207 (334)
11 1qzz_A RDMB, aclacinomycin-10- 99.7 1E-18 3.4E-23 129.1 6.0 105 10-115 117-222 (374)
12 1tw3_A COMT, carminomycin 4-O- 99.7 1.8E-18 6.3E-23 127.2 6.9 104 11-115 120-223 (360)
13 3dp7_A SAM-dependent methyltra 99.7 3.4E-18 1.2E-22 126.5 7.3 106 7-116 109-220 (363)
14 1x19_A CRTF-related protein; m 99.7 1.4E-16 4.8E-21 117.4 8.5 96 9-115 131-230 (359)
15 2r3s_A Uncharacterized protein 99.7 3.4E-16 1.1E-20 113.8 8.7 101 8-115 103-205 (335)
16 3mcz_A O-methyltransferase; ad 99.6 3.3E-15 1.1E-19 109.5 7.5 98 10-115 120-219 (352)
17 1jg1_A PIMT;, protein-L-isoasp 98.3 1.1E-07 3.8E-12 65.8 0.9 51 63-115 80-131 (235)
18 1ve3_A Hypothetical protein PH 98.3 2.7E-07 9.3E-12 62.8 2.4 39 75-115 38-77 (227)
19 3dtn_A Putative methyltransfer 98.2 2.3E-06 7.9E-11 58.6 6.0 51 65-115 34-85 (234)
20 2qe6_A Uncharacterized protein 98.2 9.4E-07 3.2E-11 62.9 4.2 42 75-116 77-122 (274)
21 3e05_A Precorrin-6Y C5,15-meth 98.2 2.5E-06 8.6E-11 57.4 5.4 50 65-115 31-81 (204)
22 4dzr_A Protein-(glutamine-N5) 98.2 3.1E-06 1E-10 56.8 5.3 51 66-116 21-72 (215)
23 1yb2_A Hypothetical protein TA 98.1 1.8E-06 6E-11 61.1 4.0 50 65-115 101-152 (275)
24 1i9g_A Hypothetical protein RV 98.1 4.5E-06 1.5E-10 58.7 5.7 99 15-115 37-141 (280)
25 3hm2_A Precorrin-6Y C5,15-meth 98.1 2E-06 6.8E-11 56.3 3.6 49 66-115 17-66 (178)
26 3fzg_A 16S rRNA methylase; met 98.1 1.1E-06 3.6E-11 60.2 2.2 42 74-115 48-90 (200)
27 3b3j_A Histone-arginine methyl 98.1 2.6E-06 9E-11 65.2 4.4 103 8-115 87-197 (480)
28 2fca_A TRNA (guanine-N(7)-)-me 98.1 3E-06 1E-10 57.9 3.8 41 75-115 38-79 (213)
29 3mb5_A SAM-dependent methyltra 98.1 2.1E-06 7.1E-11 59.7 3.0 52 63-115 82-135 (255)
30 1yzh_A TRNA (guanine-N(7)-)-me 98.0 3.9E-06 1.3E-10 57.0 3.9 41 75-115 41-82 (214)
31 3jwh_A HEN1; methyltransferase 98.0 3.3E-06 1.1E-10 57.3 3.4 42 74-115 28-70 (217)
32 3g07_A 7SK snRNA methylphospha 98.0 4.1E-06 1.4E-10 59.8 4.0 42 75-116 46-88 (292)
33 3ege_A Putative methyltransfer 98.0 1.6E-05 5.4E-10 55.6 6.9 51 64-117 24-75 (261)
34 4gek_A TRNA (CMO5U34)-methyltr 98.0 4.4E-06 1.5E-10 59.1 3.9 43 74-116 69-114 (261)
35 3dlc_A Putative S-adenosyl-L-m 98.0 3.7E-06 1.3E-10 56.5 3.3 48 65-115 35-83 (219)
36 2p35_A Trans-aconitate 2-methy 98.0 5.7E-06 2E-10 57.3 4.3 50 65-115 24-74 (259)
37 3gjy_A Spermidine synthase; AP 98.0 2.5E-06 8.7E-11 62.3 2.5 40 77-116 91-131 (317)
38 3dxy_A TRNA (guanine-N(7)-)-me 98.0 5.1E-06 1.7E-10 57.2 3.8 40 75-114 34-74 (218)
39 3vc1_A Geranyl diphosphate 2-C 98.0 1.5E-05 5E-10 57.2 6.4 60 55-115 97-157 (312)
40 3mq2_A 16S rRNA methyltransfer 98.0 1E-05 3.5E-10 54.9 5.3 40 73-112 25-65 (218)
41 3jwg_A HEN1, methyltransferase 98.0 3.7E-06 1.3E-10 57.1 3.0 42 74-115 28-70 (219)
42 1nkv_A Hypothetical protein YJ 98.0 1.3E-05 4.3E-10 55.5 5.5 50 64-115 26-76 (256)
43 3ckk_A TRNA (guanine-N(7)-)-me 97.9 5.9E-06 2E-10 57.5 3.6 41 74-114 45-86 (235)
44 3ou2_A SAM-dependent methyltra 97.9 2E-05 6.9E-10 52.9 6.2 50 64-115 35-85 (218)
45 3dh0_A SAM dependent methyltra 97.9 5.5E-06 1.9E-10 56.1 3.4 51 64-115 27-79 (219)
46 3mgg_A Methyltransferase; NYSG 97.9 9.8E-06 3.3E-10 56.8 4.7 43 73-115 35-78 (276)
47 2pwy_A TRNA (adenine-N(1)-)-me 97.9 5.2E-06 1.8E-10 57.5 3.1 70 44-115 63-138 (258)
48 3hem_A Cyclopropane-fatty-acyl 97.9 1.1E-05 3.7E-10 57.5 4.8 49 65-115 63-112 (302)
49 1vl5_A Unknown conserved prote 97.9 8.3E-06 2.8E-10 56.8 4.0 53 60-115 23-76 (260)
50 3bkw_A MLL3908 protein, S-aden 97.9 1.5E-05 5.1E-10 54.5 5.1 50 64-115 33-83 (243)
51 2vdv_E TRNA (guanine-N(7)-)-me 97.9 8.4E-06 2.9E-10 56.7 3.8 41 74-114 48-89 (246)
52 3dli_A Methyltransferase; PSI- 97.9 2.6E-05 8.9E-10 53.7 6.1 48 67-116 33-81 (240)
53 3g5l_A Putative S-adenosylmeth 97.9 1.6E-05 5.6E-10 55.0 5.1 49 65-115 35-84 (253)
54 3orh_A Guanidinoacetate N-meth 97.9 5.1E-06 1.8E-10 57.6 2.3 41 75-116 60-101 (236)
55 4dcm_A Ribosomal RNA large sub 97.9 1.9E-05 6.4E-10 58.7 5.4 50 65-115 213-263 (375)
56 3g5t_A Trans-aconitate 3-methy 97.9 2.7E-05 9.2E-10 55.4 6.0 42 74-115 35-78 (299)
57 3tfw_A Putative O-methyltransf 97.9 1.3E-06 4.4E-11 61.1 -1.0 42 74-115 62-105 (248)
58 3bus_A REBM, methyltransferase 97.9 2.5E-05 8.4E-10 54.6 5.6 49 64-114 51-100 (273)
59 3f4k_A Putative methyltransfer 97.9 2.1E-05 7.1E-10 54.4 5.2 49 66-115 37-86 (257)
60 3adn_A Spermidine synthase; am 97.9 5.8E-06 2E-10 59.6 2.4 42 75-116 83-125 (294)
61 3gu3_A Methyltransferase; alph 97.8 1.7E-05 5.9E-10 56.1 4.7 42 73-114 20-63 (284)
62 3ujc_A Phosphoethanolamine N-m 97.8 1.3E-05 4.5E-10 55.5 3.9 49 65-115 46-95 (266)
63 2plw_A Ribosomal RNA methyltra 97.8 3.9E-05 1.3E-09 51.2 6.0 45 65-109 12-58 (201)
64 3kkz_A Uncharacterized protein 97.8 1.9E-05 6.7E-10 55.1 4.6 42 73-115 44-86 (267)
65 1jsx_A Glucose-inhibited divis 97.8 1.5E-05 5.1E-10 53.5 3.7 40 76-115 66-106 (207)
66 2yxd_A Probable cobalt-precorr 97.8 2.7E-05 9.1E-10 50.8 4.8 47 66-115 27-74 (183)
67 3cc8_A Putative methyltransfer 97.8 1.9E-05 6.6E-10 53.3 4.2 48 64-115 23-71 (230)
68 1o54_A SAM-dependent O-methylt 97.8 3.1E-05 1.1E-09 54.6 5.3 51 64-115 102-154 (277)
69 3g89_A Ribosomal RNA small sub 97.8 1.4E-05 4.7E-10 56.1 3.3 42 74-115 79-121 (249)
70 2ozv_A Hypothetical protein AT 97.8 1.8E-05 6.2E-10 55.6 3.9 43 73-115 34-77 (260)
71 1fbn_A MJ fibrillarin homologu 97.8 2E-05 6.9E-10 54.1 4.0 41 73-113 72-113 (230)
72 1iy9_A Spermidine synthase; ro 97.8 8.1E-06 2.8E-10 58.1 2.0 42 75-116 75-117 (275)
73 2pjd_A Ribosomal RNA small sub 97.8 1.3E-05 4.4E-10 58.5 3.1 51 64-115 186-237 (343)
74 3p2e_A 16S rRNA methylase; met 97.8 2.3E-05 7.7E-10 54.2 4.2 34 75-108 24-57 (225)
75 1m6y_A S-adenosyl-methyltransf 97.8 2.9E-05 9.8E-10 56.2 4.8 51 64-115 16-67 (301)
76 2o57_A Putative sarcosine dime 97.7 3E-05 1E-09 54.9 4.7 49 64-114 68-121 (297)
77 3njr_A Precorrin-6Y methylase; 97.7 3.4E-05 1.1E-09 52.3 4.7 47 66-115 47-94 (204)
78 1nv8_A HEMK protein; class I a 97.7 1.5E-05 5.3E-10 56.9 3.1 39 76-115 124-163 (284)
79 2esr_A Methyltransferase; stru 97.7 4E-05 1.4E-09 50.2 4.9 41 74-115 30-71 (177)
80 3kr9_A SAM-dependent methyltra 97.7 1.3E-05 4.5E-10 55.8 2.5 41 75-115 15-56 (225)
81 3iv6_A Putative Zn-dependent a 97.7 2.5E-05 8.6E-10 55.5 4.0 50 63-115 34-84 (261)
82 1kpg_A CFA synthase;, cyclopro 97.7 3.3E-05 1.1E-09 54.4 4.6 49 65-115 55-104 (287)
83 1pjz_A Thiopurine S-methyltran 97.7 3.4E-05 1.1E-09 52.2 4.4 45 68-115 16-61 (203)
84 2b3t_A Protein methyltransfera 97.7 4.3E-05 1.5E-09 53.9 5.1 41 75-115 109-150 (276)
85 1xdz_A Methyltransferase GIDB; 97.7 1.7E-05 5.7E-10 54.9 2.8 42 74-115 69-111 (240)
86 2avd_A Catechol-O-methyltransf 97.7 1.1E-05 3.8E-10 55.0 1.9 43 73-115 67-111 (229)
87 3bkx_A SAM-dependent methyltra 97.7 2.1E-05 7.2E-10 55.0 3.3 43 65-108 34-77 (275)
88 2h00_A Methyltransferase 10 do 97.7 1.4E-05 4.7E-10 55.6 2.3 41 75-115 65-106 (254)
89 3ntv_A MW1564 protein; rossman 97.7 2E-05 6.7E-10 54.4 3.0 43 73-115 69-112 (232)
90 1xxl_A YCGJ protein; structura 97.7 3.7E-05 1.3E-09 53.0 4.5 48 64-114 11-59 (239)
91 2xvm_A Tellurite resistance pr 97.7 5.1E-05 1.7E-09 50.3 4.8 48 65-115 23-71 (199)
92 3mti_A RRNA methylase; SAM-dep 97.7 2.2E-05 7.5E-10 51.9 3.0 41 73-115 20-61 (185)
93 2yxe_A Protein-L-isoaspartate 97.7 4.7E-05 1.6E-09 51.4 4.7 50 65-115 68-119 (215)
94 2nyu_A Putative ribosomal RNA 97.7 0.00011 3.7E-09 48.7 6.3 44 66-109 13-65 (196)
95 2fk8_A Methoxy mycolic acid sy 97.7 4.3E-05 1.5E-09 54.7 4.6 50 64-115 80-130 (318)
96 3ccf_A Cyclopropane-fatty-acyl 97.7 4.4E-05 1.5E-09 53.7 4.6 48 65-115 48-96 (279)
97 1xtp_A LMAJ004091AAA; SGPP, st 97.7 1.7E-05 6E-10 54.6 2.4 49 65-115 84-133 (254)
98 3uwp_A Histone-lysine N-methyl 97.7 5.6E-05 1.9E-09 57.2 5.2 49 65-114 164-213 (438)
99 2cmg_A Spermidine synthase; tr 97.7 4.4E-05 1.5E-09 54.1 4.3 41 75-117 72-113 (262)
100 3gnl_A Uncharacterized protein 97.7 2.5E-05 8.6E-10 55.0 3.0 41 75-115 21-62 (244)
101 3bwc_A Spermidine synthase; SA 97.6 2.6E-05 9E-10 56.2 3.1 43 74-116 94-137 (304)
102 2gpy_A O-methyltransferase; st 97.6 3.9E-05 1.3E-09 52.6 3.9 42 74-115 53-95 (233)
103 1xj5_A Spermidine synthase 1; 97.6 1.8E-05 6.1E-10 58.0 2.3 43 74-116 119-162 (334)
104 1u2z_A Histone-lysine N-methyl 97.6 8.1E-05 2.8E-09 56.4 5.9 49 65-114 233-282 (433)
105 1dus_A MJ0882; hypothetical pr 97.6 5.6E-05 1.9E-09 49.6 4.5 48 65-115 43-91 (194)
106 3duw_A OMT, O-methyltransferas 97.6 3.3E-05 1.1E-09 52.5 3.4 42 74-115 57-100 (223)
107 2pt6_A Spermidine synthase; tr 97.6 1.7E-05 5.8E-10 57.7 2.0 42 75-116 116-158 (321)
108 3ggd_A SAM-dependent methyltra 97.6 8.1E-05 2.8E-09 51.2 5.3 41 73-115 54-95 (245)
109 3tma_A Methyltransferase; thum 97.6 4.6E-05 1.6E-09 55.8 4.2 52 63-115 192-245 (354)
110 3eey_A Putative rRNA methylase 97.6 3.1E-05 1E-09 51.6 3.1 43 73-115 20-64 (197)
111 3lec_A NADB-rossmann superfami 97.6 2.4E-05 8.4E-10 54.6 2.6 41 75-115 21-62 (230)
112 1inl_A Spermidine synthase; be 97.6 1.9E-05 6.4E-10 56.8 2.0 42 75-116 90-132 (296)
113 2o07_A Spermidine synthase; st 97.6 1.9E-05 6.5E-10 57.0 2.0 43 74-116 94-137 (304)
114 2fyt_A Protein arginine N-meth 97.6 6.5E-05 2.2E-09 54.9 4.9 49 65-115 55-103 (340)
115 1mjf_A Spermidine synthase; sp 97.6 1.8E-05 6.1E-10 56.4 1.8 40 75-115 75-115 (281)
116 3tr6_A O-methyltransferase; ce 97.6 4E-05 1.4E-09 52.1 3.4 41 75-115 64-106 (225)
117 1wzn_A SAM-dependent methyltra 97.6 0.00019 6.6E-09 49.4 7.0 47 66-115 33-80 (252)
118 1o9g_A RRNA methyltransferase; 97.6 4.4E-05 1.5E-09 53.0 3.6 41 75-115 51-94 (250)
119 3ftd_A Dimethyladenosine trans 97.6 6.3E-05 2.2E-09 52.9 4.4 51 64-116 21-72 (249)
120 2fhp_A Methylase, putative; al 97.6 0.00012 4.1E-09 48.0 5.5 42 73-115 42-84 (187)
121 1qam_A ERMC' methyltransferase 97.6 8.3E-05 2.9E-09 51.9 4.9 49 64-115 20-69 (244)
122 2i7c_A Spermidine synthase; tr 97.6 2.9E-05 9.9E-10 55.4 2.6 43 74-116 77-120 (283)
123 4htf_A S-adenosylmethionine-de 97.6 6.7E-05 2.3E-09 52.8 4.5 38 76-115 69-107 (285)
124 2b2c_A Spermidine synthase; be 97.6 2.3E-05 8E-10 56.9 2.1 42 75-116 108-150 (314)
125 1uir_A Polyamine aminopropyltr 97.6 3E-05 1E-09 56.1 2.7 42 75-116 77-119 (314)
126 3hnr_A Probable methyltransfer 97.6 4.4E-05 1.5E-09 51.6 3.4 48 65-115 36-84 (220)
127 4hg2_A Methyltransferase type 97.6 8.7E-05 3E-09 52.3 4.9 41 75-117 39-80 (257)
128 1ws6_A Methyltransferase; stru 97.6 4.4E-05 1.5E-09 49.4 3.1 39 75-115 41-80 (171)
129 2yqz_A Hypothetical protein TT 97.6 0.00011 3.7E-09 50.8 5.2 40 73-114 37-77 (263)
130 3pfg_A N-methyltransferase; N, 97.6 6.8E-05 2.3E-09 52.2 4.1 39 75-115 50-89 (263)
131 3e23_A Uncharacterized protein 97.6 0.00011 3.8E-09 49.3 5.0 41 73-115 41-82 (211)
132 3c3p_A Methyltransferase; NP_9 97.6 4.2E-05 1.4E-09 51.6 2.9 41 75-115 56-98 (210)
133 3cgg_A SAM-dependent methyltra 97.5 7.7E-05 2.6E-09 49.0 4.0 47 65-115 38-85 (195)
134 3lbf_A Protein-L-isoaspartate 97.5 0.00012 4.2E-09 49.1 5.1 48 65-115 68-116 (210)
135 2bm8_A Cephalosporin hydroxyla 97.5 8.6E-05 2.9E-09 51.5 4.4 40 76-115 82-126 (236)
136 3lpm_A Putative methyltransfer 97.5 6.4E-05 2.2E-09 52.5 3.8 42 73-115 46-89 (259)
137 2b25_A Hypothetical protein; s 97.5 0.00012 4E-09 53.1 5.2 50 65-115 96-147 (336)
138 2aot_A HMT, histamine N-methyl 97.5 0.00011 3.8E-09 52.1 5.0 40 75-114 52-98 (292)
139 3uzu_A Ribosomal RNA small sub 97.5 5.1E-05 1.7E-09 54.3 3.2 50 65-115 33-85 (279)
140 1l3i_A Precorrin-6Y methyltran 97.5 0.00011 3.6E-09 48.2 4.6 47 66-115 25-72 (192)
141 3e8s_A Putative SAM dependent 97.5 5.7E-05 1.9E-09 50.9 3.3 48 65-115 43-91 (227)
142 3i9f_A Putative type 11 methyl 97.5 1.8E-05 6.1E-10 51.5 0.7 46 67-115 10-56 (170)
143 3fpf_A Mtnas, putative unchara 97.5 7.1E-05 2.4E-09 54.2 3.8 44 73-116 120-164 (298)
144 2nxc_A L11 mtase, ribosomal pr 97.5 6.7E-05 2.3E-09 52.5 3.6 61 50-115 98-159 (254)
145 3thr_A Glycine N-methyltransfe 97.5 5E-05 1.7E-09 53.6 3.0 47 65-114 48-95 (293)
146 3u81_A Catechol O-methyltransf 97.5 6.7E-05 2.3E-09 51.1 3.4 41 75-115 58-100 (221)
147 3g2m_A PCZA361.24; SAM-depende 97.5 7E-05 2.4E-09 53.2 3.6 49 63-115 72-121 (299)
148 2p7i_A Hypothetical protein; p 97.5 5.9E-05 2E-09 51.4 3.1 39 75-115 42-81 (250)
149 3ocj_A Putative exported prote 97.5 2.6E-05 8.7E-10 55.8 1.2 43 73-115 116-160 (305)
150 1dl5_A Protein-L-isoaspartate 97.5 0.00012 4.3E-09 52.7 4.7 50 65-115 66-117 (317)
151 2hnk_A SAM-dependent O-methylt 97.5 9.9E-05 3.4E-09 50.9 3.9 42 74-115 59-102 (239)
152 2yvl_A TRMI protein, hypotheti 97.5 0.00022 7.5E-09 48.9 5.6 72 41-115 54-130 (248)
153 2pxx_A Uncharacterized protein 97.5 7.2E-05 2.5E-09 50.0 3.1 41 74-115 41-82 (215)
154 1vbf_A 231AA long hypothetical 97.5 0.00018 6.1E-09 49.0 5.1 48 65-115 61-109 (231)
155 2ipx_A RRNA 2'-O-methyltransfe 97.5 9.6E-05 3.3E-09 50.7 3.7 36 73-108 75-111 (233)
156 3grz_A L11 mtase, ribosomal pr 97.4 0.00012 4E-09 49.1 4.0 40 75-115 60-100 (205)
157 3bxo_A N,N-dimethyltransferase 97.4 7.5E-05 2.6E-09 50.9 3.0 40 74-115 39-79 (239)
158 4fsd_A Arsenic methyltransfera 97.4 8.2E-05 2.8E-09 55.0 3.3 41 75-115 83-125 (383)
159 4e2x_A TCAB9; kijanose, tetron 97.4 0.00014 4.7E-09 54.1 4.6 51 63-116 96-147 (416)
160 1ej0_A FTSJ; methyltransferase 97.4 0.00045 1.5E-08 44.3 6.5 45 65-109 12-57 (180)
161 3r3h_A O-methyltransferase, SA 97.4 6.5E-05 2.2E-09 52.3 2.6 41 75-115 60-102 (242)
162 3c3y_A Pfomt, O-methyltransfer 97.4 0.00027 9.2E-09 48.9 5.7 42 74-115 69-112 (237)
163 3sm3_A SAM-dependent methyltra 97.4 0.00011 3.8E-09 49.7 3.7 39 75-115 30-69 (235)
164 3q87_B N6 adenine specific DNA 97.4 0.00016 5.6E-09 47.4 4.2 34 76-112 24-58 (170)
165 1p91_A Ribosomal RNA large sub 97.4 8.2E-05 2.8E-09 51.9 2.9 41 74-114 84-125 (269)
166 1zx0_A Guanidinoacetate N-meth 97.4 8E-05 2.7E-09 51.2 2.8 40 75-115 60-100 (236)
167 1yub_A Ermam, rRNA methyltrans 97.4 9.3E-05 3.2E-09 51.5 3.1 50 64-116 19-69 (245)
168 1sui_A Caffeoyl-COA O-methyltr 97.4 0.0001 3.5E-09 51.5 3.2 42 74-115 78-121 (247)
169 1zq9_A Probable dimethyladenos 97.4 0.00016 5.6E-09 51.5 4.3 48 64-114 18-66 (285)
170 3l8d_A Methyltransferase; stru 97.4 0.00019 6.6E-09 48.9 4.5 40 75-116 53-93 (242)
171 3a27_A TYW2, uncharacterized p 97.4 9.2E-05 3.2E-09 52.4 2.9 43 73-115 117-160 (272)
172 2pbf_A Protein-L-isoaspartate 97.4 0.00027 9.3E-09 48.0 5.2 43 73-115 78-126 (227)
173 3fut_A Dimethyladenosine trans 97.4 0.00018 6.2E-09 51.3 4.4 46 65-114 38-84 (271)
174 2qm3_A Predicted methyltransfe 97.4 0.0001 3.4E-09 54.5 3.1 41 75-116 172-213 (373)
175 3p9n_A Possible methyltransfer 97.4 0.00015 5.1E-09 48.1 3.7 40 75-115 44-84 (189)
176 3dr5_A Putative O-methyltransf 97.4 0.0002 6.9E-09 49.2 4.4 40 76-115 57-98 (221)
177 3m70_A Tellurite resistance pr 97.3 0.00013 4.3E-09 51.5 3.3 48 65-115 111-159 (286)
178 1qyr_A KSGA, high level kasuga 97.3 0.00023 7.7E-09 50.2 4.6 50 64-116 11-61 (252)
179 3d2l_A SAM-dependent methyltra 97.3 0.00018 6E-09 49.1 4.0 38 75-115 33-71 (243)
180 3bgv_A MRNA CAP guanine-N7 met 97.3 0.00022 7.5E-09 51.0 4.6 40 75-115 34-74 (313)
181 1nt2_A Fibrillarin-like PRE-rR 97.3 0.00036 1.2E-08 47.5 5.3 36 73-108 55-90 (210)
182 3h2b_A SAM-dependent methyltra 97.3 0.00012 4.3E-09 48.8 3.0 38 76-115 42-80 (203)
183 1g8a_A Fibrillarin-like PRE-rR 97.3 0.00012 4.2E-09 49.8 2.9 39 73-111 71-111 (227)
184 3tqs_A Ribosomal RNA small sub 97.3 0.00013 4.3E-09 51.6 3.0 48 64-114 19-67 (255)
185 3cbg_A O-methyltransferase; cy 97.3 0.00016 5.3E-09 49.9 3.4 41 75-115 72-114 (232)
186 2ex4_A Adrenal gland protein A 97.3 9.8E-05 3.3E-09 50.8 2.3 40 75-115 79-119 (241)
187 1ne2_A Hypothetical protein TA 97.3 0.00014 4.9E-09 48.6 3.0 41 74-115 50-91 (200)
188 3gru_A Dimethyladenosine trans 97.3 0.00031 1E-08 50.7 4.9 49 63-114 39-88 (295)
189 3m33_A Uncharacterized protein 97.3 0.00014 4.9E-09 49.6 3.1 39 75-115 48-87 (226)
190 3ofk_A Nodulation protein S; N 97.3 0.00015 5.2E-09 48.8 3.1 41 73-115 49-90 (216)
191 1y8c_A S-adenosylmethionine-de 97.3 0.00022 7.7E-09 48.5 3.7 39 75-115 37-76 (246)
192 2ift_A Putative methylase HI07 97.2 0.00017 5.9E-09 48.6 3.0 39 76-115 54-93 (201)
193 2y1w_A Histone-arginine methyl 97.2 0.00025 8.7E-09 51.8 4.1 48 65-114 41-88 (348)
194 3bzb_A Uncharacterized protein 97.2 0.00025 8.6E-09 50.3 3.9 41 74-115 78-120 (281)
195 3evz_A Methyltransferase; NYSG 97.2 0.00021 7.2E-09 48.6 3.4 42 73-115 53-96 (230)
196 2qfm_A Spermine synthase; sper 97.2 0.00014 4.9E-09 53.9 2.6 41 75-116 188-229 (364)
197 3q7e_A Protein arginine N-meth 97.2 0.00018 6.2E-09 52.6 3.1 40 75-115 66-105 (349)
198 1wy7_A Hypothetical protein PH 97.2 0.00025 8.4E-09 47.5 3.5 41 74-115 48-89 (207)
199 3lcc_A Putative methyl chlorid 97.2 0.00018 6.1E-09 49.2 2.8 37 77-115 68-105 (235)
200 2fpo_A Methylase YHHF; structu 97.2 0.00021 7.1E-09 48.2 3.0 39 76-115 55-94 (202)
201 1i1n_A Protein-L-isoaspartate 97.2 0.00025 8.6E-09 48.1 3.4 42 74-115 76-119 (226)
202 3gdh_A Trimethylguanosine synt 97.2 0.00021 7.3E-09 49.0 3.0 39 75-115 78-117 (241)
203 3dou_A Ribosomal RNA large sub 97.2 0.00054 1.8E-08 46.0 4.9 43 65-109 15-57 (191)
204 3tm4_A TRNA (guanine N2-)-meth 97.2 0.00024 8.2E-09 52.5 3.4 43 73-115 215-258 (373)
205 2gb4_A Thiopurine S-methyltran 97.2 0.00019 6.6E-09 50.4 2.8 38 75-114 68-106 (252)
206 2h1r_A Dimethyladenosine trans 97.1 0.00023 7.7E-09 51.2 2.9 49 64-115 32-81 (299)
207 2frn_A Hypothetical protein PH 97.1 0.00022 7.4E-09 50.6 2.7 40 75-115 125-165 (278)
208 1g6q_1 HnRNP arginine N-methyl 97.1 0.00021 7.1E-09 51.9 2.5 40 75-115 38-77 (328)
209 2avn_A Ubiquinone/menaquinone 97.1 0.00028 9.6E-09 49.1 3.1 39 75-115 54-93 (260)
210 2ih2_A Modification methylase 97.1 0.00072 2.5E-08 50.0 5.4 49 65-114 30-80 (421)
211 2kw5_A SLR1183 protein; struct 97.1 0.00024 8.1E-09 47.3 2.4 36 78-115 32-68 (202)
212 3giw_A Protein of unknown func 97.1 0.00053 1.8E-08 49.1 4.2 42 75-116 78-123 (277)
213 3opn_A Putative hemolysin; str 97.1 0.0015 5E-08 45.3 6.4 47 65-113 27-75 (232)
214 1r18_A Protein-L-isoaspartate( 97.1 0.00038 1.3E-08 47.5 3.3 43 73-115 82-131 (227)
215 1ixk_A Methyltransferase; open 97.0 0.00053 1.8E-08 49.5 4.1 66 48-114 92-159 (315)
216 1ri5_A MRNA capping enzyme; me 97.0 0.00041 1.4E-08 48.7 3.2 41 74-115 63-104 (298)
217 3ajd_A Putative methyltransfer 97.0 0.00047 1.6E-08 48.7 3.4 46 68-114 77-124 (274)
218 4df3_A Fibrillarin-like rRNA/T 97.0 0.00038 1.3E-08 48.6 2.7 50 65-114 65-118 (233)
219 4azs_A Methyltransferase WBDD; 97.0 0.00055 1.9E-08 53.2 3.7 39 75-115 66-105 (569)
220 3r0q_C Probable protein argini 96.9 0.00072 2.5E-08 50.0 4.0 41 73-114 61-101 (376)
221 3o4f_A Spermidine synthase; am 96.9 0.00045 1.5E-08 49.9 2.8 43 74-116 82-125 (294)
222 2wa2_A Non-structural protein 96.9 0.0013 4.6E-08 46.8 4.8 36 73-111 80-115 (276)
223 3htx_A HEN1; HEN1, small RNA m 96.9 0.00048 1.6E-08 56.3 2.7 41 75-115 721-763 (950)
224 2p8j_A S-adenosylmethionine-de 96.8 0.00054 1.8E-08 45.7 2.3 41 74-115 22-63 (209)
225 2oxt_A Nucleoside-2'-O-methylt 96.8 0.0016 5.6E-08 46.0 4.8 35 73-110 72-106 (265)
226 3frh_A 16S rRNA methylase; met 96.8 0.001 3.6E-08 46.9 3.6 40 73-115 103-143 (253)
227 3ldu_A Putative methylase; str 96.7 0.0017 5.8E-08 48.3 4.7 34 63-97 184-217 (385)
228 2vdw_A Vaccinia virus capping 96.7 0.00065 2.2E-08 48.8 2.3 39 76-115 49-88 (302)
229 2zfu_A Nucleomethylin, cerebra 96.7 0.0029 9.9E-08 42.4 5.4 37 66-107 58-94 (215)
230 3k0b_A Predicted N6-adenine-sp 96.7 0.0018 6.3E-08 48.3 4.7 36 63-99 190-225 (393)
231 3hp7_A Hemolysin, putative; st 96.7 0.0039 1.3E-07 44.9 6.1 46 65-112 75-122 (291)
232 2g72_A Phenylethanolamine N-me 96.7 0.00028 9.6E-09 49.8 -0.0 39 75-114 71-110 (289)
233 1uwv_A 23S rRNA (uracil-5-)-me 96.7 0.0012 4.3E-08 49.6 3.5 47 66-115 278-325 (433)
234 2r6z_A UPF0341 protein in RSP 96.6 0.0013 4.4E-08 46.4 3.2 40 67-109 76-115 (258)
235 1af7_A Chemotaxis receptor met 96.6 0.00084 2.9E-08 47.8 2.1 41 76-116 106-155 (274)
236 2i62_A Nicotinamide N-methyltr 96.6 0.00022 7.6E-09 49.2 -1.1 40 74-114 55-95 (265)
237 2igt_A SAM dependent methyltra 96.5 0.0014 4.9E-08 47.7 3.1 39 75-115 153-192 (332)
238 3dmg_A Probable ribosomal RNA 96.5 0.0012 4.1E-08 49.1 2.6 39 75-115 233-272 (381)
239 3lcv_B Sisomicin-gentamicin re 96.5 0.00023 7.9E-09 50.9 -1.3 41 74-114 131-172 (281)
240 2gs9_A Hypothetical protein TT 96.5 0.0012 4.3E-08 44.0 2.4 35 75-114 36-72 (211)
241 3ldg_A Putative uncharacterize 96.5 0.0032 1.1E-07 46.9 4.7 36 63-99 183-218 (384)
242 2yxl_A PH0851 protein, 450AA l 96.5 0.0026 8.9E-08 48.1 4.2 46 67-113 252-299 (450)
243 1wg8_A Predicted S-adenosylmet 96.4 0.0032 1.1E-07 45.2 4.3 50 63-115 11-61 (285)
244 1sqg_A SUN protein, FMU protei 96.4 0.0015 5.1E-08 49.0 2.5 45 68-113 240-285 (429)
245 1vlm_A SAM-dependent methyltra 96.3 0.0018 6E-08 43.8 2.4 33 76-114 48-81 (219)
246 4hc4_A Protein arginine N-meth 96.3 0.002 6.8E-08 48.0 2.8 39 76-115 84-122 (376)
247 2dul_A N(2),N(2)-dimethylguano 96.3 0.002 7E-08 47.8 2.7 40 76-115 48-88 (378)
248 3c6k_A Spermine synthase; sper 96.2 0.0022 7.7E-08 47.8 2.7 41 75-116 205-246 (381)
249 2oyr_A UPF0341 protein YHIQ; a 96.1 0.0078 2.7E-07 42.5 4.8 43 64-109 76-120 (258)
250 3id6_C Fibrillarin-like rRNA/T 96.1 0.011 3.9E-07 41.0 5.5 43 65-107 64-109 (232)
251 2f8l_A Hypothetical protein LM 96.1 0.0021 7.3E-08 46.7 1.8 41 75-115 130-176 (344)
252 2p41_A Type II methyltransfera 96.0 0.0054 1.8E-07 44.2 3.5 32 73-107 80-111 (305)
253 3m6w_A RRNA methylase; rRNA me 95.9 0.0056 1.9E-07 46.7 3.5 47 67-114 94-142 (464)
254 4dmg_A Putative uncharacterize 95.9 0.0049 1.7E-07 46.0 3.1 38 76-115 215-253 (393)
255 2a14_A Indolethylamine N-methy 95.8 0.00084 2.9E-08 46.9 -1.3 39 75-114 55-94 (263)
256 3k6r_A Putative transferase PH 95.8 0.004 1.4E-07 44.5 2.2 41 74-115 124-165 (278)
257 2as0_A Hypothetical protein PH 95.8 0.0058 2E-07 45.2 3.1 40 75-115 217-257 (396)
258 2jjq_A Uncharacterized RNA met 95.8 0.0071 2.4E-07 45.5 3.6 39 75-115 290-329 (425)
259 3ll7_A Putative methyltransfer 95.7 0.0066 2.3E-07 45.7 3.1 38 76-115 94-132 (410)
260 3c0k_A UPF0064 protein YCCW; P 95.7 0.0065 2.2E-07 45.0 3.1 40 75-115 220-260 (396)
261 2yx1_A Hypothetical protein MJ 95.7 0.0051 1.7E-07 44.7 2.4 38 75-115 195-233 (336)
262 1wxx_A TT1595, hypothetical pr 95.7 0.0047 1.6E-07 45.6 2.2 39 75-115 209-248 (382)
263 2b78_A Hypothetical protein SM 95.6 0.0065 2.2E-07 45.0 2.7 41 74-115 211-252 (385)
264 3v97_A Ribosomal RNA large sub 95.6 0.015 5E-07 46.5 4.8 33 63-96 179-211 (703)
265 2okc_A Type I restriction enzy 95.4 0.01 3.5E-07 44.7 3.2 49 65-114 162-224 (445)
266 3b5i_A S-adenosyl-L-methionine 95.3 0.014 4.7E-07 43.4 3.5 34 76-109 53-101 (374)
267 3bt7_A TRNA (uracil-5-)-methyl 95.2 0.02 6.9E-07 42.0 4.3 37 77-115 215-252 (369)
268 1rjd_A PPM1P, carboxy methyl t 95.2 0.029 9.8E-07 41.0 5.0 39 75-113 97-135 (334)
269 3m4x_A NOL1/NOP2/SUN family pr 95.2 0.011 3.7E-07 45.1 2.7 47 67-114 98-146 (456)
270 3sso_A Methyltransferase; macr 95.0 0.021 7.1E-07 43.1 3.8 32 76-107 217-255 (419)
271 2efj_A 3,7-dimethylxanthine me 94.8 0.022 7.4E-07 42.5 3.5 33 76-108 53-102 (384)
272 2b9e_A NOL1/NOP2/SUN domain fa 94.8 0.024 8.1E-07 40.9 3.6 45 69-114 97-143 (309)
273 2frx_A Hypothetical protein YE 94.7 0.032 1.1E-06 42.6 4.2 40 75-114 117-158 (479)
274 3tka_A Ribosomal RNA small sub 94.7 0.069 2.3E-06 39.3 5.7 52 63-115 46-99 (347)
275 3v97_A Ribosomal RNA large sub 94.0 0.038 1.3E-06 44.1 3.5 40 75-115 539-579 (703)
276 3ua3_A Protein arginine N-meth 94.0 0.079 2.7E-06 42.6 5.2 49 37-92 378-426 (745)
277 3gcz_A Polyprotein; flavivirus 93.9 0.074 2.5E-06 38.1 4.5 42 65-107 81-122 (282)
278 4gqb_A Protein arginine N-meth 93.9 0.06 2.1E-06 42.7 4.3 67 37-110 323-396 (637)
279 2zig_A TTHA0409, putative modi 93.9 0.039 1.3E-06 39.3 3.0 38 75-114 235-273 (297)
280 3evf_A RNA-directed RNA polyme 93.2 0.11 3.9E-06 37.0 4.4 36 66-102 66-101 (277)
281 3iht_A S-adenosyl-L-methionine 92.9 0.83 2.8E-05 30.1 7.9 58 47-107 15-72 (174)
282 3axs_A Probable N(2),N(2)-dime 92.9 0.051 1.7E-06 40.6 2.4 40 76-115 53-94 (392)
283 2py6_A Methyltransferase FKBM; 92.5 0.21 7.3E-06 37.2 5.3 39 74-112 225-266 (409)
284 1m6e_X S-adenosyl-L-methionnin 92.2 0.053 1.8E-06 40.1 1.7 36 74-109 50-101 (359)
285 3s1s_A Restriction endonucleas 92.1 0.13 4.5E-06 42.1 3.8 42 73-114 319-364 (878)
286 2ar0_A M.ecoki, type I restric 92.0 0.08 2.7E-06 41.0 2.5 48 66-114 161-227 (541)
287 2k4m_A TR8_protein, UPF0146 pr 91.7 0.17 5.9E-06 33.0 3.5 32 75-107 35-67 (153)
288 1i4w_A Mitochondrial replicati 90.9 0.33 1.1E-05 35.7 4.7 32 76-107 59-90 (353)
289 1zkd_A DUF185; NESG, RPR58, st 90.7 0.57 1.9E-05 34.9 5.8 37 74-110 79-122 (387)
290 3eld_A Methyltransferase; flav 90.3 0.23 8E-06 35.8 3.4 35 73-107 79-113 (300)
291 3p8z_A Mtase, non-structural p 90.2 0.41 1.4E-05 33.8 4.4 43 65-108 69-111 (267)
292 2xyq_A Putative 2'-O-methyl tr 90.1 0.35 1.2E-05 34.6 4.1 34 73-108 61-101 (290)
293 3lkz_A Non-structural protein 89.2 0.41 1.4E-05 34.7 3.9 43 65-108 85-127 (321)
294 4auk_A Ribosomal RNA large sub 88.2 0.34 1.2E-05 36.0 3.0 33 74-108 210-242 (375)
295 3khk_A Type I restriction-modi 87.9 0.17 5.9E-06 39.2 1.4 38 77-114 246-299 (544)
296 1g60_A Adenine-specific methyl 87.2 0.5 1.7E-05 32.8 3.3 38 75-114 212-250 (260)
297 3lkd_A Type I restriction-modi 87.0 0.27 9.1E-06 38.2 2.0 40 75-114 221-264 (542)
298 3iei_A Leucine carboxyl methyl 86.6 1.9 6.4E-05 31.4 6.2 78 35-113 48-129 (334)
299 3vrd_B FCCB subunit, flavocyto 86.4 0.66 2.2E-05 33.7 3.7 31 77-107 3-35 (401)
300 2qy6_A UPF0209 protein YFCK; s 84.5 0.87 3E-05 31.8 3.4 33 75-107 60-104 (257)
301 2uyo_A Hypothetical protein ML 84.4 1.7 6E-05 31.1 5.1 38 75-114 102-140 (310)
302 4f3n_A Uncharacterized ACR, CO 80.9 3.1 0.00011 31.5 5.4 56 44-107 114-174 (432)
303 3hyw_A Sulfide-quinone reducta 79.7 1.8 6E-05 32.0 3.7 31 77-107 3-35 (430)
304 3mag_A VP39; methylated adenin 77.9 1.6 5.6E-05 31.4 2.9 33 75-107 60-96 (307)
305 4eqs_A Coenzyme A disulfide re 73.3 4.6 0.00016 29.9 4.5 30 78-107 2-33 (437)
306 2px2_A Genome polyprotein [con 73.2 3.3 0.00011 29.4 3.4 31 65-96 64-94 (269)
307 1u6z_A Exopolyphosphatase; alp 70.2 3.2 0.00011 31.8 3.1 20 66-86 129-148 (513)
308 3mdq_A Exopolyphosphatase; str 69.6 3.7 0.00013 29.4 3.1 20 66-86 122-142 (315)
309 3fpz_A Thiazole biosynthetic e 67.0 5.2 0.00018 28.1 3.5 29 79-107 68-98 (326)
310 2q7x_A UPF0052 protein SP_1565 66.6 5.1 0.00017 29.1 3.3 26 77-102 5-32 (326)
311 3c4a_A Probable tryptophan hyd 65.5 6.3 0.00021 28.3 3.7 31 78-108 2-34 (381)
312 2zwa_A Leucine carboxyl methyl 65.3 5.2 0.00018 31.5 3.5 39 75-113 107-153 (695)
313 1m6i_A Programmed cell death p 64.6 6.4 0.00022 29.6 3.7 32 76-107 11-44 (493)
314 3kkj_A Amine oxidase, flavin-c 64.3 5.1 0.00017 25.8 2.8 29 79-107 5-33 (336)
315 3iwa_A FAD-dependent pyridine 62.1 9.9 0.00034 28.2 4.3 33 77-109 4-38 (472)
316 4hb9_A Similarities with proba 61.5 6.2 0.00021 28.1 3.0 30 78-107 3-32 (412)
317 2p0y_A Hypothetical protein LP 60.2 4.5 0.00015 29.6 2.1 28 75-102 9-38 (341)
318 3c4n_A Uncharacterized protein 59.6 8.4 0.00029 28.0 3.5 32 77-108 37-70 (405)
319 3sx6_A Sulfide-quinone reducta 58.0 8.2 0.00028 28.4 3.2 31 77-107 5-38 (437)
320 3lzw_A Ferredoxin--NADP reduct 57.9 7.8 0.00027 26.7 3.0 32 77-108 8-39 (332)
321 3oc4_A Oxidoreductase, pyridin 57.7 10 0.00034 28.0 3.7 33 77-109 3-37 (452)
322 2wk1_A NOVP; transferase, O-me 57.4 14 0.00047 26.1 4.2 32 75-106 106-142 (282)
323 4gcm_A TRXR, thioredoxin reduc 57.0 8 0.00027 26.7 2.9 30 79-108 9-38 (312)
324 4g6h_A Rotenone-insensitive NA 56.9 8.8 0.0003 29.1 3.3 32 76-107 42-73 (502)
325 1ges_A Glutathione reductase; 56.8 11 0.00038 27.8 3.8 32 77-108 5-36 (450)
326 2pyx_A Tryptophan halogenase; 56.0 5.9 0.0002 30.0 2.2 33 77-109 8-52 (526)
327 1vpt_A VP39; RNA CAP, poly(A) 55.3 7.6 0.00026 28.4 2.5 31 77-107 77-111 (348)
328 2xdo_A TETX2 protein; tetracyc 55.0 13 0.00044 26.7 3.8 32 77-108 27-58 (398)
329 3h28_A Sulfide-quinone reducta 54.9 9 0.00031 28.0 3.0 31 77-107 3-35 (430)
330 3ab1_A Ferredoxin--NADP reduct 54.9 9.2 0.00031 27.0 3.0 31 77-107 15-45 (360)
331 2aqj_A Tryptophan halogenase, 54.6 8.3 0.00028 29.2 2.8 33 77-109 6-41 (538)
332 2e4g_A Tryptophan halogenase; 54.5 9 0.00031 29.2 3.0 34 76-109 25-61 (550)
333 3cb2_A Gamma-1-tubulin, tubuli 54.4 32 0.0011 26.2 6.0 37 65-101 124-165 (475)
334 4fk1_A Putative thioredoxin re 53.8 9.7 0.00033 26.3 2.9 29 79-107 9-37 (304)
335 3h8l_A NADH oxidase; membrane 53.8 7.6 0.00026 28.1 2.4 32 77-108 2-36 (409)
336 3ics_A Coenzyme A-disulfide re 53.8 12 0.00042 28.6 3.7 34 76-109 36-71 (588)
337 2zbw_A Thioredoxin reductase; 53.1 11 0.00037 26.1 3.1 31 77-107 6-36 (335)
338 2hqm_A GR, grase, glutathione 52.4 10 0.00036 28.2 3.0 32 77-108 12-43 (479)
339 3nix_A Flavoprotein/dehydrogen 52.3 13 0.00045 26.7 3.5 32 77-108 6-37 (421)
340 2vou_A 2,6-dihydroxypyridine h 52.2 11 0.00037 27.1 3.0 32 77-108 6-37 (397)
341 3hi0_A Putative exopolyphospha 51.7 8.3 0.00028 29.5 2.4 11 76-86 141-151 (508)
342 3cer_A Possible exopolyphospha 51.7 9.1 0.00031 27.7 2.5 15 75-89 146-160 (343)
343 2r9z_A Glutathione amide reduc 51.6 11 0.00038 28.0 3.1 32 77-108 5-36 (463)
344 3bed_A PTS system, IIA compone 51.6 5.7 0.00019 25.0 1.3 47 67-114 56-104 (142)
345 3e1t_A Halogenase; flavoprotei 51.5 14 0.00049 27.7 3.7 33 77-109 8-40 (512)
346 3ufb_A Type I restriction-modi 51.4 18 0.00062 27.7 4.3 30 66-96 209-238 (530)
347 3dme_A Conserved exported prot 51.2 11 0.00037 26.3 2.8 31 78-108 6-36 (369)
348 3fbs_A Oxidoreductase; structu 51.1 12 0.00042 25.1 3.1 30 78-107 4-33 (297)
349 3f8d_A Thioredoxin reductase ( 51.1 12 0.00042 25.5 3.1 31 77-107 16-46 (323)
350 1t6c_A Exopolyphosphatase; alp 50.9 8.7 0.0003 27.5 2.3 12 75-86 138-149 (315)
351 1pdo_A Mannose permease; phosp 50.9 8.1 0.00028 24.0 1.9 47 67-113 52-100 (135)
352 3ct6_A PTS-dependent dihydroxy 50.6 4.8 0.00016 25.2 0.8 36 74-111 59-94 (131)
353 3c96_A Flavin-containing monoo 50.5 13 0.00043 26.9 3.1 31 78-108 6-37 (410)
354 2vvp_A Ribose-5-phosphate isom 50.1 7.4 0.00025 25.4 1.6 34 82-115 67-100 (162)
355 2vvr_A Ribose-5-phosphate isom 49.7 7 0.00024 25.2 1.5 34 82-115 64-97 (149)
356 2x3n_A Probable FAD-dependent 49.5 13 0.00044 26.6 3.0 31 77-107 7-37 (399)
357 3ic9_A Dihydrolipoamide dehydr 49.5 15 0.00053 27.4 3.6 31 78-108 10-40 (492)
358 3ryc_A Tubulin alpha chain; al 49.4 16 0.00054 27.7 3.6 37 65-101 124-165 (451)
359 2cdu_A NADPH oxidase; flavoenz 49.4 17 0.00059 26.7 3.8 31 78-108 2-34 (452)
360 3atr_A Conserved archaeal prot 49.4 13 0.00043 27.4 3.0 31 78-108 8-38 (453)
361 3itj_A Thioredoxin reductase 1 49.0 10 0.00035 26.1 2.4 32 76-107 22-53 (338)
362 1k0i_A P-hydroxybenzoate hydro 49.0 9.2 0.00031 27.3 2.2 32 78-109 4-35 (394)
363 1fec_A Trypanothione reductase 48.8 9.1 0.00031 28.7 2.2 29 78-106 5-34 (490)
364 2weu_A Tryptophan 5-halogenase 48.2 7.9 0.00027 29.0 1.8 32 78-109 4-38 (511)
365 1zk7_A HGII, reductase, mercur 48.0 17 0.00057 26.9 3.5 32 77-108 5-36 (467)
366 3klj_A NAD(FAD)-dependent dehy 48.0 17 0.00058 26.4 3.5 33 75-107 8-40 (385)
367 3cgv_A Geranylgeranyl reductas 48.0 13 0.00045 26.3 2.9 32 78-109 6-37 (397)
368 3qj4_A Renalase; FAD/NAD(P)-bi 47.6 15 0.00053 25.7 3.2 31 78-108 3-36 (342)
369 3cty_A Thioredoxin reductase; 47.5 15 0.00051 25.3 3.1 32 77-108 17-48 (319)
370 4a5l_A Thioredoxin reductase; 47.4 11 0.00036 25.9 2.2 29 79-107 7-35 (314)
371 3cvo_A Methyltransferase-like 47.2 12 0.00043 25.0 2.5 37 75-114 30-67 (202)
372 3he8_A Ribose-5-phosphate isom 47.2 8.6 0.00029 24.8 1.6 34 82-115 63-96 (149)
373 3rp8_A Flavoprotein monooxygen 46.9 15 0.00053 26.3 3.1 32 77-108 24-55 (407)
374 1z6n_A Hypothetical protein PA 46.7 54 0.0018 20.8 6.2 80 34-115 11-101 (167)
375 4dna_A Probable glutathione re 46.7 19 0.00064 26.6 3.6 31 78-108 7-37 (463)
376 1onf_A GR, grase, glutathione 46.6 14 0.00047 27.8 2.9 31 78-108 4-34 (500)
377 3ntd_A FAD-dependent pyridine 46.4 18 0.00063 27.3 3.6 32 77-108 2-35 (565)
378 3ono_A Ribose/galactose isomer 46.3 8.3 0.00028 26.4 1.5 34 82-115 72-105 (214)
379 1o1x_A Ribose-5-phosphate isom 46.1 7.8 0.00027 25.1 1.3 34 82-115 75-108 (155)
380 3alj_A 2-methyl-3-hydroxypyrid 45.9 16 0.00054 26.1 3.0 32 77-108 12-43 (379)
381 3oz2_A Digeranylgeranylglycero 45.8 15 0.00051 25.7 2.9 29 79-107 7-35 (397)
382 2q7v_A Thioredoxin reductase; 45.7 17 0.00057 25.1 3.1 32 77-108 9-40 (325)
383 2bcg_G Secretory pathway GDP d 45.7 18 0.0006 26.8 3.3 32 77-108 12-43 (453)
384 4dgk_A Phytoene dehydrogenase; 45.6 11 0.00037 27.9 2.2 33 77-109 2-34 (501)
385 4dyq_A Gene 1 protein; GP1, oc 45.6 6.5 0.00022 24.6 0.8 53 16-68 19-77 (140)
386 3nrn_A Uncharacterized protein 45.3 16 0.00055 26.4 3.0 31 78-108 2-32 (421)
387 1xdi_A RV3303C-LPDA; reductase 45.3 17 0.00059 27.1 3.3 31 78-108 4-37 (499)
388 4ebb_A Dipeptidyl peptidase 2; 45.2 28 0.00097 26.2 4.4 26 76-101 127-153 (472)
389 2wpf_A Trypanothione reductase 45.1 12 0.00041 28.1 2.4 30 77-106 8-38 (495)
390 3kd9_A Coenzyme A disulfide re 45.0 22 0.00074 26.1 3.7 32 77-108 4-37 (449)
391 3c5y_A Ribose/galactose isomer 45.0 9.1 0.00031 26.5 1.5 34 82-115 89-122 (231)
392 3dje_A Fructosyl amine: oxygen 44.8 16 0.00053 26.6 2.9 33 77-109 7-40 (438)
393 2ppw_A Conserved domain protei 44.8 7.8 0.00027 26.6 1.1 34 82-115 73-106 (216)
394 1ryi_A Glycine oxidase; flavop 44.7 15 0.00052 25.9 2.8 32 77-108 18-49 (382)
395 3o0h_A Glutathione reductase; 44.6 15 0.00053 27.3 2.9 31 78-108 28-58 (484)
396 1nhp_A NADH peroxidase; oxidor 44.6 22 0.00074 26.1 3.7 31 78-108 2-34 (447)
397 2o2z_A Hypothetical protein; s 44.6 6.7 0.00023 28.5 0.8 26 77-102 5-32 (323)
398 1ps9_A 2,4-dienoyl-COA reducta 44.2 26 0.00088 27.4 4.2 31 77-107 374-404 (671)
399 3urh_A Dihydrolipoyl dehydroge 44.1 16 0.00054 27.2 2.9 30 78-107 27-56 (491)
400 3s5p_A Ribose 5-phosphate isom 44.0 10 0.00035 24.9 1.6 34 82-115 84-117 (166)
401 2bto_A Tubulin btuba; bacteria 43.4 20 0.0007 27.2 3.4 36 65-100 126-166 (473)
402 2btq_B Tubulin btubb; structur 43.4 21 0.00072 26.7 3.4 44 66-109 124-175 (426)
403 1t0c_A Insulin; type I beta-tu 43.1 2.8 9.5E-05 19.0 -0.9 10 80-89 10-19 (31)
404 1rp0_A ARA6, thiazole biosynth 43.0 24 0.00083 24.2 3.5 31 78-108 41-72 (284)
405 1fl2_A Alkyl hydroperoxide red 43.0 26 0.00088 23.9 3.7 29 78-106 3-31 (310)
406 3ka7_A Oxidoreductase; structu 42.8 16 0.00056 26.2 2.7 31 78-108 2-32 (425)
407 1trb_A Thioredoxin reductase; 42.8 20 0.00068 24.5 3.1 31 77-107 6-36 (320)
408 3ph3_A Ribose-5-phosphate isom 42.7 9.4 0.00032 25.1 1.3 34 82-115 83-116 (169)
409 3gwf_A Cyclohexanone monooxyge 42.6 25 0.00084 26.9 3.8 31 77-107 9-40 (540)
410 3uox_A Otemo; baeyer-villiger 42.5 18 0.0006 27.7 3.0 32 77-108 10-41 (545)
411 3ryc_B Tubulin beta chain; alp 42.5 21 0.00073 27.0 3.3 45 65-109 122-174 (445)
412 2q0l_A TRXR, thioredoxin reduc 42.3 19 0.00067 24.5 3.0 31 78-108 3-34 (311)
413 4a9w_A Monooxygenase; baeyer-v 41.9 19 0.00066 24.8 2.9 31 78-108 5-35 (357)
414 1ojt_A Surface protein; redox- 41.7 20 0.00067 26.7 3.1 30 78-107 8-37 (482)
415 2qae_A Lipoamide, dihydrolipoy 41.3 20 0.00069 26.5 3.1 31 78-108 4-34 (468)
416 1pqw_A Polyketide synthase; ro 40.9 28 0.00096 22.2 3.5 35 73-108 36-72 (198)
417 3d1c_A Flavin-containing putat 40.9 21 0.00071 25.0 3.0 32 77-108 5-37 (369)
418 2fsj_A Hypothetical protein TA 40.8 10 0.00034 27.3 1.3 10 77-86 192-201 (346)
419 3dgh_A TRXR-1, thioredoxin red 40.8 19 0.00063 26.8 2.8 29 78-106 11-39 (483)
420 2gv8_A Monooxygenase; FMO, FAD 40.5 29 0.001 25.4 3.8 33 76-108 6-40 (447)
421 3nyc_A D-arginine dehydrogenas 40.1 23 0.0008 24.8 3.1 32 76-108 9-40 (381)
422 2eq6_A Pyruvate dehydrogenase 40.0 22 0.00074 26.3 3.1 31 78-108 8-38 (464)
423 2g1u_A Hypothetical protein TM 39.9 62 0.0021 19.8 4.9 39 76-115 19-59 (155)
424 1vdc_A NTR, NADPH dependent th 39.9 17 0.00059 25.1 2.4 31 77-107 9-39 (333)
425 3ihm_A Styrene monooxygenase A 39.8 17 0.00059 26.6 2.5 31 77-107 23-53 (430)
426 4gde_A UDP-galactopyranose mut 39.8 20 0.0007 26.4 2.9 29 79-107 13-42 (513)
427 4em8_A Ribose 5-phosphate isom 39.8 11 0.00036 24.3 1.1 34 82-115 69-102 (148)
428 2c0c_A Zinc binding alcohol de 39.7 65 0.0022 22.9 5.5 34 73-107 161-196 (362)
429 3l8k_A Dihydrolipoyl dehydroge 39.6 20 0.00068 26.5 2.8 29 78-106 6-34 (466)
430 2xve_A Flavin-containing monoo 39.6 22 0.00076 26.4 3.1 32 77-108 3-40 (464)
431 2qa1_A PGAE, polyketide oxygen 39.5 26 0.00089 26.4 3.4 34 74-107 9-42 (500)
432 3qfa_A Thioredoxin reductase 1 39.5 20 0.00068 27.1 2.8 30 78-107 34-63 (519)
433 1sez_A Protoporphyrinogen oxid 39.4 29 0.001 25.6 3.7 32 77-108 14-45 (504)
434 3k7p_A Ribose 5-phosphate isom 39.4 14 0.00046 24.6 1.6 34 82-115 87-120 (179)
435 3g3e_A D-amino-acid oxidase; F 39.2 22 0.00074 24.9 2.8 32 78-109 2-39 (351)
436 4ap3_A Steroid monooxygenase; 38.9 22 0.00074 27.3 3.0 31 77-107 22-52 (549)
437 3r9u_A Thioredoxin reductase; 38.9 15 0.00051 25.0 1.9 32 77-108 5-37 (315)
438 3k7m_X 6-hydroxy-L-nicotine ox 38.8 19 0.00066 25.9 2.6 30 78-107 3-32 (431)
439 3lad_A Dihydrolipoamide dehydr 38.7 16 0.00056 27.0 2.2 30 79-108 6-35 (476)
440 3ps9_A TRNA 5-methylaminomethy 38.6 28 0.00095 27.2 3.6 31 77-107 273-303 (676)
441 2dkh_A 3-hydroxybenzoate hydro 38.6 25 0.00086 27.4 3.3 31 77-107 33-64 (639)
442 3pvc_A TRNA 5-methylaminomethy 38.6 28 0.00096 27.3 3.6 31 77-107 265-295 (689)
443 1yvv_A Amine oxidase, flavin-c 38.4 22 0.00077 24.4 2.8 31 78-108 4-34 (336)
444 2dph_A Formaldehyde dismutase; 38.4 48 0.0017 23.9 4.7 46 68-114 179-226 (398)
445 2oln_A NIKD protein; flavoprot 38.3 23 0.00079 25.2 2.9 32 78-109 6-37 (397)
446 2cul_A Glucose-inhibited divis 38.2 26 0.00088 23.2 3.0 31 78-108 5-35 (232)
447 4b1b_A TRXR, thioredoxin reduc 38.1 28 0.00097 26.7 3.5 28 79-106 45-72 (542)
448 2ivd_A PPO, PPOX, protoporphyr 38.0 28 0.00096 25.5 3.4 33 76-108 16-48 (478)
449 2gqf_A Hypothetical protein HI 38.0 22 0.00076 25.9 2.8 30 79-108 7-36 (401)
450 1cjc_A Protein (adrenodoxin re 38.0 33 0.0011 25.5 3.8 31 77-107 7-39 (460)
451 2gf3_A MSOX, monomeric sarcosi 37.9 23 0.00078 25.0 2.8 32 78-109 5-36 (389)
452 4dvj_A Putative zinc-dependent 37.8 19 0.00064 25.8 2.3 38 75-112 171-211 (363)
453 3dk9_A Grase, GR, glutathione 37.8 23 0.00079 26.2 2.9 31 78-108 22-52 (478)
454 3da1_A Glycerol-3-phosphate de 37.7 30 0.001 26.5 3.6 30 79-108 21-50 (561)
455 3lov_A Protoporphyrinogen oxid 37.6 30 0.001 25.3 3.5 31 77-107 5-37 (475)
456 1boo_A Protein (N-4 cytosine-s 37.4 45 0.0015 23.6 4.3 33 75-109 252-284 (323)
457 3v76_A Flavoprotein; structura 37.4 23 0.00078 26.1 2.8 31 78-108 29-59 (417)
458 3fg2_P Putative rubredoxin red 37.3 30 0.001 25.0 3.4 31 77-107 2-34 (404)
459 2qa2_A CABE, polyketide oxygen 37.2 24 0.00083 26.5 3.0 33 75-107 11-43 (499)
460 2ppv_A Uncharacterized protein 37.1 7.2 0.00025 28.4 0.0 26 77-102 5-32 (332)
461 2a8x_A Dihydrolipoyl dehydroge 36.9 25 0.00085 25.9 3.0 31 78-108 5-35 (464)
462 1v59_A Dihydrolipoamide dehydr 36.9 26 0.00089 25.9 3.1 30 78-107 7-36 (478)
463 2yqu_A 2-oxoglutarate dehydrog 36.8 26 0.0009 25.7 3.1 31 78-108 3-33 (455)
464 1zmd_A Dihydrolipoyl dehydroge 36.8 26 0.00089 25.9 3.1 32 77-108 7-38 (474)
465 2yg5_A Putrescine oxidase; oxi 36.6 26 0.00088 25.5 3.0 31 77-107 6-36 (453)
466 1lvl_A Dihydrolipoamide dehydr 36.6 18 0.00061 26.8 2.1 31 78-108 7-37 (458)
467 3dgz_A Thioredoxin reductase 2 36.4 24 0.00081 26.3 2.8 30 78-107 8-37 (488)
468 2bry_A NEDD9 interacting prote 36.4 31 0.0011 25.9 3.5 33 76-108 92-124 (497)
469 3ihg_A RDME; flavoenzyme, anth 36.3 33 0.0011 25.8 3.6 32 77-108 6-37 (535)
470 2ywl_A Thioredoxin reductase r 36.3 33 0.0011 21.4 3.1 30 78-107 3-32 (180)
471 3sgw_A Ribose 5-phosphate isom 36.2 16 0.00056 24.3 1.6 34 82-115 95-128 (184)
472 1ebd_A E3BD, dihydrolipoamide 35.8 26 0.00089 25.7 2.9 31 78-108 5-35 (455)
473 1d5t_A Guanine nucleotide diss 35.8 32 0.0011 25.2 3.4 32 77-108 7-38 (433)
474 3aap_A Ectonucleoside triphosp 35.2 12 0.00041 27.3 0.9 13 76-88 141-153 (353)
475 3ces_A MNMG, tRNA uridine 5-ca 34.8 26 0.00091 27.8 2.9 31 77-107 29-59 (651)
476 1xhc_A NADH oxidase /nitrite r 34.3 35 0.0012 24.4 3.3 32 76-108 8-39 (367)
477 3mt1_A Putative carboxynorsper 34.1 14 0.00048 26.8 1.2 12 77-88 191-202 (365)
478 3h1q_A Ethanolamine utilizatio 34.0 16 0.00056 24.7 1.5 11 76-86 140-150 (272)
479 3qwb_A Probable quinone oxidor 34.0 32 0.0011 24.1 3.0 39 73-112 146-187 (334)
480 1wly_A CAAR, 2-haloacrylate re 33.8 1.2E+02 0.004 21.1 6.4 36 73-109 143-180 (333)
481 2vdc_G Glutamate synthase [NAD 33.7 26 0.00088 26.1 2.6 33 76-108 122-154 (456)
482 2b9w_A Putative aminooxidase; 33.6 35 0.0012 24.5 3.2 31 77-107 7-38 (424)
483 3vc3_A Beta-cyanoalnine syntha 33.4 83 0.0028 22.5 5.2 43 64-107 183-227 (344)
484 3v3t_A Cell division GTPase FT 33.3 69 0.0024 23.6 4.7 40 64-103 80-124 (360)
485 2i0z_A NAD(FAD)-utilizing dehy 33.2 29 0.001 25.5 2.8 31 78-108 28-58 (447)
486 1dxl_A Dihydrolipoamide dehydr 33.0 28 0.00095 25.6 2.7 32 77-108 7-38 (470)
487 2x8g_A Thioredoxin glutathione 33.0 30 0.001 26.4 3.0 32 76-107 107-138 (598)
488 3i33_A Heat shock-related 70 k 32.6 17 0.00059 26.2 1.5 10 77-86 216-225 (404)
489 2r0c_A REBC; flavin adenine di 32.5 31 0.001 26.2 2.9 31 77-107 27-57 (549)
490 2jae_A L-amino acid oxidase; o 32.4 38 0.0013 24.9 3.4 34 75-108 10-43 (489)
491 1y0p_A Fumarate reductase flav 32.4 30 0.001 26.4 2.8 31 78-108 128-158 (571)
492 3i3l_A Alkylhalidase CMLS; fla 32.0 30 0.001 26.8 2.8 32 77-108 24-55 (591)
493 2vvm_A Monoamine oxidase N; FA 32.0 33 0.0011 25.3 2.9 31 77-107 40-70 (495)
494 1i8t_A UDP-galactopyranose mut 31.9 35 0.0012 24.4 3.0 30 78-107 3-32 (367)
495 3qfu_A 78 kDa glucose-regulate 31.9 18 0.00062 25.9 1.5 10 77-86 208-217 (394)
496 4at0_A 3-ketosteroid-delta4-5a 31.8 29 0.00099 26.0 2.6 37 73-109 38-74 (510)
497 2zxi_A TRNA uridine 5-carboxym 31.7 32 0.0011 27.3 2.9 30 78-107 29-58 (637)
498 3lfh_A Manxa, phosphotransfera 31.7 16 0.00054 23.1 1.0 39 75-114 63-103 (144)
499 2gmh_A Electron transfer flavo 31.6 24 0.00083 27.1 2.2 31 78-108 37-73 (584)
500 4gni_A Putative heat shock pro 31.6 17 0.00059 26.3 1.3 11 76-86 206-216 (409)
No 1
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.90 E-value=1.5e-23 Score=155.66 Aligned_cols=112 Identities=59% Similarity=1.103 Sum_probs=103.8
Q ss_pred ccCcchhhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCC
Q 043449 6 SREINVVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGG 85 (118)
Q Consensus 6 ~~~~~~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg 85 (118)
..++.+++.|.+|.+++|+|+++|+..+|.++|+|+.++|+..+.|+++|...+......+++.++++++..+|||||||
T Consensus 132 ~~~~~~~~~~~~L~~~~r~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G 211 (364)
T 3p9c_A 132 NQDKVLMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLLELYHGFEGLGTLVDVGGG 211 (364)
T ss_dssp HTSHHHHGGGGGHHHHHHHCSCHHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCT
T ss_pred hcCHHHHHHHhCHHHHHhhCCChHHHhcCCCHHHHHHhCHHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 35677899999999999999999999999999999999999999999999999887778888888768888999999999
Q ss_pred CcHHHHHHHHHCCCCcEEEeechHHhhhCCCC
Q 043449 86 IGASLNMIISKYPSIKGINFDLPHVIQDAPAY 117 (118)
Q Consensus 86 ~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~ 117 (118)
+|.++..+++++|+++++++|+|++++.+++.
T Consensus 212 ~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~ 243 (364)
T 3p9c_A 212 VGATVAAIAAHYPTIKGVNFDLPHVISEAPQF 243 (364)
T ss_dssp TSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC
T ss_pred CCHHHHHHHHHCCCCeEEEecCHHHHHhhhhc
Confidence 99999999999999999999999999998763
No 2
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.89 E-value=3e-24 Score=158.78 Aligned_cols=108 Identities=23% Similarity=0.311 Sum_probs=100.0
Q ss_pred CcchhhccCchHHHHhcCCchhhhccCC---CcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecC
Q 043449 8 EINVVWGRYHLKDAVLEGGIPFNMAYGM---NTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGG 84 (118)
Q Consensus 8 ~~~~~~~w~~L~~~vr~g~~~f~~~~g~---~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGG 84 (118)
.+..|+.|.+|.+++|+|+++|+..+|. ++|+++.++|+....|+++|...+....+.+++.++ |++..+||||||
T Consensus 110 ~~~~~~~~~~L~~~vr~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~-~~~~~~v~DvGg 188 (353)
T 4a6d_A 110 GRTSYRCWGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD-LSVFPLMCDLGG 188 (353)
T ss_dssp HHTHHHHHTTHHHHHHHTSCCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSC-GGGCSEEEEETC
T ss_pred CHHHHHHHHHHHHHHhcCCChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcC-cccCCeEEeeCC
Confidence 4567899999999999999999999874 679999999999999999999998888889999999 999999999999
Q ss_pred CCcHHHHHHHHHCCCCcEEEeechHHhhhCCC
Q 043449 85 GIGASLNMIISKYPSIKGINFDLPHVIQDAPA 116 (118)
Q Consensus 85 g~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~ 116 (118)
|+|.++.+++++||+++++++|+|+|++.|++
T Consensus 189 G~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~ 220 (353)
T 4a6d_A 189 GAGALAKECMSLYPGCKITVFDIPEVVWTAKQ 220 (353)
T ss_dssp TTSHHHHHHHHHCSSCEEEEEECHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCceeEeccCHHHHHHHHH
Confidence 99999999999999999999999999988753
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.89 E-value=3e-23 Score=154.10 Aligned_cols=113 Identities=65% Similarity=1.077 Sum_probs=104.1
Q ss_pred cccCcchhhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecC
Q 043449 5 ASREINVVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGG 84 (118)
Q Consensus 5 ~~~~~~~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGG 84 (118)
+..++.++..|.+|.+++|+|+++|+..+|.++|+|+.++|+..+.|+++|...+......+++.+++|++..+||||||
T Consensus 133 ~~~~~~~~~~~~~l~~~~r~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~vlDvG~ 212 (368)
T 3reo_A 133 LATDKVLLEPWFYLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGG 212 (368)
T ss_dssp HHTCHHHHGGGGGHHHHHHHCSCHHHHHSSSCHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTTCSEEEEETC
T ss_pred HhcCHHHHhhhhchHHHHhcCCCHHHHHhCCCHHHHHhhCHHHHHHHHHHHHhhhhhHHHHHHHhcccccCCCEEEEeCC
Confidence 34567889999999999999999999999999999999999999999999999988777888888876888899999999
Q ss_pred CCcHHHHHHHHHCCCCcEEEeechHHhhhCCCC
Q 043449 85 GIGASLNMIISKYPSIKGINFDLPHVIQDAPAY 117 (118)
Q Consensus 85 g~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~ 117 (118)
|+|.++..+++++|+++++++|+|++++.+++.
T Consensus 213 G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~ 245 (368)
T 3reo_A 213 GTGAVASMIVAKYPSINAINFDLPHVIQDAPAF 245 (368)
T ss_dssp TTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC
T ss_pred CcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhc
Confidence 999999999999999999999999999998764
No 4
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.84 E-value=7.1e-21 Score=141.14 Aligned_cols=111 Identities=46% Similarity=0.772 Sum_probs=88.2
Q ss_pred cCcchhhccCchHHHHhcC-CchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCC
Q 043449 7 REINVVWGRYHLKDAVLEG-GIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGG 85 (118)
Q Consensus 7 ~~~~~~~~w~~L~~~vr~g-~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg 85 (118)
.++.+++.|.+|.+++|+| +++|+.++|.++|+|+.++|+..+.|+.+|...+....+.+++.++.+++..+|||||||
T Consensus 140 ~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~~vLDvG~G 219 (372)
T 1fp1_D 140 CYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGG 219 (372)
T ss_dssp TCHHHHHHHTTHHHHHHSCC--------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCSEEEEETCT
T ss_pred cCchHHHHHHHHHHHHHcCCCChhHHHhCCCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhhccCCCCEEEEeCCC
Confidence 3456788999999999999 899999999999999999999999999999998887777888888657888999999999
Q ss_pred CcHHHHHHHHHCCCCcEEEeechHHhhhCCCC
Q 043449 86 IGASLNMIISKYPSIKGINFDLPHVIQDAPAY 117 (118)
Q Consensus 86 ~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~ 117 (118)
+|.++..+++++|+++++++|+|.+++.++++
T Consensus 220 ~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~ 251 (372)
T 1fp1_D 220 SGRNLELIISKYPLIKGINFDLPQVIENAPPL 251 (372)
T ss_dssp TSHHHHHHHHHCTTCEEEEEECHHHHTTCCCC
T ss_pred CcHHHHHHHHHCCCCeEEEeChHHHHHhhhhc
Confidence 99999999999999999999999999988763
No 5
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.84 E-value=2.6e-21 Score=142.43 Aligned_cols=106 Identities=20% Similarity=0.283 Sum_probs=99.5
Q ss_pred cCcchhhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCC
Q 043449 7 REINVVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGI 86 (118)
Q Consensus 7 ~~~~~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~ 86 (118)
.++.+++.|.+|.+++|+|+++|+..+|.++|+|+.++|+..+.|.++|...+....+.+++.++ |++..+|||||||+
T Consensus 117 ~~~~~~~~~~~l~~~l~~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vLDvG~G~ 195 (348)
T 3lst_A 117 TDTMFWTMSHRVASALGPERPAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAEHLILARAGD-FPATGTVADVGGGR 195 (348)
T ss_dssp TSHHHHHHHHTHHHHTCTTCCCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHHHHSC-CCSSEEEEEETCTT
T ss_pred cCHHHHHHHHHHHHHHhcCCChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHHHhCC-ccCCceEEEECCcc
Confidence 45567899999999999999999999999999999999999999999999998888888999999 99999999999999
Q ss_pred cHHHHHHHHHCCCCcEEEeechHHhhh
Q 043449 87 GASLNMIISKYPSIKGINFDLPHVIQD 113 (118)
Q Consensus 87 G~~~~~l~~~~P~l~~~v~Dlp~vi~~ 113 (118)
|.++..+++++|+++++++|+|+++..
T Consensus 196 G~~~~~l~~~~p~~~~~~~D~~~~~~~ 222 (348)
T 3lst_A 196 GGFLLTVLREHPGLQGVLLDRAEVVAR 222 (348)
T ss_dssp SHHHHHHHHHCTTEEEEEEECHHHHTT
T ss_pred CHHHHHHHHHCCCCEEEEecCHHHhhc
Confidence 999999999999999999999999873
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.83 E-value=6.1e-21 Score=140.81 Aligned_cols=109 Identities=28% Similarity=0.406 Sum_probs=98.7
Q ss_pred cCcchhhccCchHHHHhcC--CchhhhccCCCcccccccCchHHH--HHHHHHHhcchhhHHHHHHhc--CCCCCCceEE
Q 043449 7 REINVVWGRYHLKDAVLEG--GIPFNMAYGMNTYEYHGKDPRYNK--IFNNGMFSHSTITMKKFLENY--KGFEGLKSVV 80 (118)
Q Consensus 7 ~~~~~~~~w~~L~~~vr~g--~~~f~~~~g~~~~e~~~~~p~~~~--~F~~~M~~~~~~~~~~~~~~~--~~~~~~~~vv 80 (118)
.++.+++.|.+|.+++|+| +++|+.++|.++|+|+.++|+..+ .|+.+|...+.... .+++.+ + |++..+||
T Consensus 121 ~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~-~~~~~~vl 198 (358)
T 1zg3_A 121 LHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFK-LVLQENKRV-FEGLESLV 198 (358)
T ss_dssp TSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGHHHHHHHHHHHHHHHHTHH-HHHHHTHHH-HHTCSEEE
T ss_pred cCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhhhhHHHHHHHHhcccHHHH-HHHHhcchh-ccCCCEEE
Confidence 3466789999999999999 789999999999999999999999 99999999887666 778888 5 77789999
Q ss_pred EecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCCCC
Q 043449 81 DVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAPAY 117 (118)
Q Consensus 81 DvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~~ 117 (118)
|||||+|.++..+++++|+++++++|+|.+++.++++
T Consensus 199 DvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~ 235 (358)
T 1zg3_A 199 DVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN 235 (358)
T ss_dssp EETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCC
T ss_pred EECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccC
Confidence 9999999999999999999999999999999988753
No 7
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.83 E-value=3e-21 Score=143.20 Aligned_cols=109 Identities=25% Similarity=0.454 Sum_probs=100.8
Q ss_pred cCcchhhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCC
Q 043449 7 REINVVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGI 86 (118)
Q Consensus 7 ~~~~~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~ 86 (118)
.++..++.|.+|.+++|+|+++|...+|.++|+|+.++|+..+.|+.+|...+....+.+++.++ +++..+|||||||+
T Consensus 135 ~~~~~~~~~~~l~~~l~~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~vlDvG~G~ 213 (369)
T 3gwz_A 135 AAPWHWRAWEQLTHSVRTGEASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEAGQVAAAYD-FSGAATAVDIGGGR 213 (369)
T ss_dssp HSHHHHHHHHTHHHHHHHSSCSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CTTCSEEEEETCTT
T ss_pred CCHHHHHHHHhHHHHHhCCCChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHHHHhCC-CccCcEEEEeCCCc
Confidence 34457889999999999999999999999999999999999999999999998887888999999 99999999999999
Q ss_pred cHHHHHHHHHCCCCcEEEeechHHhhhCCC
Q 043449 87 GASLNMIISKYPSIKGINFDLPHVIQDAPA 116 (118)
Q Consensus 87 G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~ 116 (118)
|.++..+++++|+++++++|+|.+++.|++
T Consensus 214 G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 243 (369)
T 3gwz_A 214 GSLMAAVLDAFPGLRGTLLERPPVAEEARE 243 (369)
T ss_dssp SHHHHHHHHHCTTCEEEEEECHHHHHHHHH
T ss_pred cHHHHHHHHHCCCCeEEEEcCHHHHHHHHH
Confidence 999999999999999999999999987653
No 8
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.83 E-value=8.6e-21 Score=139.70 Aligned_cols=107 Identities=32% Similarity=0.577 Sum_probs=98.3
Q ss_pred CcchhhccCchHHHHh-cCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhc--CCCCCCceEEEecC
Q 043449 8 EINVVWGRYHLKDAVL-EGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENY--KGFEGLKSVVDVGG 84 (118)
Q Consensus 8 ~~~~~~~w~~L~~~vr-~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~--~~~~~~~~vvDvGG 84 (118)
++.+++.|.+|.+++| +|+++|+.++|.++|+|+.++|+..+.|..+|...+....+. ++.+ + +++..+||||||
T Consensus 120 ~~~~~~~~~~L~~~l~~~g~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~-~~~~~~~-~~~~~~vlDvG~ 197 (352)
T 1fp2_A 120 DPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLA-LRDCDFV-FDGLESIVDVGG 197 (352)
T ss_dssp CHHHHHGGGGHHHHHTCSSCCHHHHHHSSCHHHHHHHCHHHHHHHHHHHHHTHHHHHHH-HHTCHHH-HTTCSEEEEETC
T ss_pred CchHHHHHHHHHHHHHhcCCChHHHHcCCCHHHHHHhChHHHHHHHHHHHhcchhhhhH-HHhcccc-cccCceEEEeCC
Confidence 5567899999999999 999999999999999999999999999999999988876666 7777 5 778899999999
Q ss_pred CCcHHHHHHHHHCCCCcEEEeechHHhhhCCC
Q 043449 85 GIGASLNMIISKYPSIKGINFDLPHVIQDAPA 116 (118)
Q Consensus 85 g~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~ 116 (118)
|+|.++..+++++|+++++++|+|.+++.+++
T Consensus 198 G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 229 (352)
T 1fp2_A 198 GTGTTAKIICETFPKLKCIVFDRPQVVENLSG 229 (352)
T ss_dssp TTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC
T ss_pred CccHHHHHHHHHCCCCeEEEeeCHHHHhhccc
Confidence 99999999999999999999999999999876
No 9
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.83 E-value=2.4e-21 Score=141.51 Aligned_cols=105 Identities=26% Similarity=0.418 Sum_probs=97.3
Q ss_pred chh-hccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcH
Q 043449 10 NVV-WGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGA 88 (118)
Q Consensus 10 ~~~-~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~ 88 (118)
..+ +.|.+|.+++++|+++|+..+|.++|+|+.++|+..+.|..+|...+....+.+++.++ |++..+|||||||+|.
T Consensus 104 ~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~ 182 (332)
T 3i53_A 104 GRGDLGFVELAHSIRTGQPAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYD-WAALGHVVDVGGGSGG 182 (332)
T ss_dssp HHHGGGGGGHHHHHHHSSCSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGGSSC-CGGGSEEEEETCTTSH
T ss_pred hHHHHHHHHhHHHHhcCCCHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHHhCC-CCCCCEEEEeCCChhH
Confidence 456 89999999999999999999999999999999999999999999988776777888888 8888999999999999
Q ss_pred HHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 89 SLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 89 ~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
++..+++++|+++++++|+|.+++.|+
T Consensus 183 ~~~~l~~~~p~~~~~~~D~~~~~~~a~ 209 (332)
T 3i53_A 183 LLSALLTAHEDLSGTVLDLQGPASAAH 209 (332)
T ss_dssp HHHHHHHHCTTCEEEEEECHHHHHHHH
T ss_pred HHHHHHHHCCCCeEEEecCHHHHHHHH
Confidence 999999999999999999999998775
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.79 E-value=6.1e-20 Score=133.92 Aligned_cols=101 Identities=28% Similarity=0.423 Sum_probs=94.1
Q ss_pred hhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHH
Q 043449 12 VWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLN 91 (118)
Q Consensus 12 ~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~ 91 (118)
++.|.+|.+++|+|+++|+..+|.++|+|+.++|+..+.|+.+| ..+....+.+++.++ +++ .+|+|||||+|.++.
T Consensus 107 ~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~ 183 (334)
T 2ip2_A 107 HAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPRLLD-FRG-RSFVDVGGGSGELTK 183 (334)
T ss_dssp HHHTTTHHHHHHHCCCHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHHHHSC-CTT-CEEEEETCTTCHHHH
T ss_pred hhHHHHHHHHHhcCCChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHHHhCC-CCC-CEEEEeCCCchHHHH
Confidence 38899999999999999999999999999999999999999999 888777788888898 888 999999999999999
Q ss_pred HHHHHCCCCcEEEeechHHhhhCC
Q 043449 92 MIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 92 ~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
.+++++|+++++++|+|.+++.++
T Consensus 184 ~l~~~~p~~~~~~~D~~~~~~~a~ 207 (334)
T 2ip2_A 184 AILQAEPSARGVMLDREGSLGVAR 207 (334)
T ss_dssp HHHHHCTTCEEEEEECTTCTHHHH
T ss_pred HHHHHCCCCEEEEeCcHHHHHHHH
Confidence 999999999999999998887764
No 11
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.75 E-value=1e-18 Score=129.07 Aligned_cols=105 Identities=23% Similarity=0.334 Sum_probs=97.0
Q ss_pred chh-hccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcH
Q 043449 10 NVV-WGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGA 88 (118)
Q Consensus 10 ~~~-~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~ 88 (118)
..+ ..|.+|.+++++|+++|+..+|.++|+++.++|+..+.|..+|...+....+.+++.++ +.+..+|+|||||+|.
T Consensus 117 ~~~~~~~~~l~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~vlDvG~G~G~ 195 (374)
T 1qzz_A 117 SHADLAFTGLLDVVRTGRPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAYD-WSAVRHVLDVGGGNGG 195 (374)
T ss_dssp HHHHGGGGGHHHHHHHSCCSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTHHHHHTSC-CTTCCEEEEETCTTSH
T ss_pred hhHHHHHHHHHHHHhcCCChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhhHhHHHHHHHhCC-CCCCCEEEEECCCcCH
Confidence 456 89999999999999999999999999999999999999999999888777778888888 8888999999999999
Q ss_pred HHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 89 SLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 89 ~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
++..+++++|+++++.+|+|.+++.++
T Consensus 196 ~~~~l~~~~~~~~~~~~D~~~~~~~a~ 222 (374)
T 1qzz_A 196 MLAAIALRAPHLRGTLVELAGPAERAR 222 (374)
T ss_dssp HHHHHHHHCTTCEEEEEECHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEeCHHHHHHHH
Confidence 999999999999999999999888764
No 12
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.74 E-value=1.8e-18 Score=127.19 Aligned_cols=104 Identities=20% Similarity=0.357 Sum_probs=96.6
Q ss_pred hhhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHH
Q 043449 11 VVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASL 90 (118)
Q Consensus 11 ~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~ 90 (118)
.+..|.+|.+++++|+++|+..+|.++|+++..+|+..+.|..+|...+....+.+++.++ +.+..+|+|||||+|.++
T Consensus 120 ~~~~~~~l~~~l~~g~~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~ 198 (360)
T 1tw3_A 120 ADISFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYD-WTNVRHVLDVGGGKGGFA 198 (360)
T ss_dssp HGGGGGGHHHHHHHCCCCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHHHSC-CTTCSEEEEETCTTSHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHHHhCC-CccCcEEEEeCCcCcHHH
Confidence 6789999999999999999999999999999999999999999999888877778888898 888899999999999999
Q ss_pred HHHHHHCCCCcEEEeechHHhhhCC
Q 043449 91 NMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 91 ~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
..+++++|+++++.+|+|.+++.++
T Consensus 199 ~~l~~~~~~~~~~~~D~~~~~~~a~ 223 (360)
T 1tw3_A 199 AAIARRAPHVSATVLEMAGTVDTAR 223 (360)
T ss_dssp HHHHHHCTTCEEEEEECTTHHHHHH
T ss_pred HHHHHhCCCCEEEEecCHHHHHHHH
Confidence 9999999999999999998888764
No 13
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.74 E-value=3.4e-18 Score=126.52 Aligned_cols=106 Identities=22% Similarity=0.209 Sum_probs=87.6
Q ss_pred cCcchhhccCchHHHHhcCCchhhhccC--CCcccccccCchHHH----HHHHHHHhcchhhHHHHHHhcCCCCCCceEE
Q 043449 7 REINVVWGRYHLKDAVLEGGIPFNMAYG--MNTYEYHGKDPRYNK----IFNNGMFSHSTITMKKFLENYKGFEGLKSVV 80 (118)
Q Consensus 7 ~~~~~~~~w~~L~~~vr~g~~~f~~~~g--~~~~e~~~~~p~~~~----~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vv 80 (118)
..+.+|++|.+|.+++|+|++++...+| .++|+++.++|+..+ .|+.+|...+. ..+++.+. ..+..+||
T Consensus 109 ~~~~~~~~~~~L~~~lr~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~---~~~l~~~~-~~~~~~vl 184 (363)
T 3dp7_A 109 NHDVNYQGLFHLEEALLNGRPEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYSDQSF---GKALEIVF-SHHPKRLL 184 (363)
T ss_dssp HHHTTHHHHTTHHHHHHHSSCGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHHHHTTCCCC---HHHHHHHG-GGCCSEEE
T ss_pred ecHHhhhhHHHHHHHHhcCCCccccccCchHhHHHHHhhCHHHHHHHHHHHHHHhhhhhH---HHHHHHhc-ccCCCEEE
Confidence 3456789999999999999999998998 689999999998776 36777665432 23344444 35678999
Q ss_pred EecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCCC
Q 043449 81 DVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAPA 116 (118)
Q Consensus 81 DvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~~ 116 (118)
|||||+|.++..+++++|+++++++|+|++++.|++
T Consensus 185 DvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~ 220 (363)
T 3dp7_A 185 DIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRK 220 (363)
T ss_dssp EESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHH
T ss_pred EeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHH
Confidence 999999999999999999999999999999987653
No 14
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.67 E-value=1.4e-16 Score=117.37 Aligned_cols=96 Identities=21% Similarity=0.348 Sum_probs=87.5
Q ss_pred cchhhccCchHHHHhcCCchhhhccCCCcccccccCch---HHHHHHHHHHhcch-hhHHHHHHhcCCCCCCceEEEecC
Q 043449 9 INVVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPR---YNKIFNNGMFSHST-ITMKKFLENYKGFEGLKSVVDVGG 84 (118)
Q Consensus 9 ~~~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~---~~~~F~~~M~~~~~-~~~~~~~~~~~~~~~~~~vvDvGG 84 (118)
+.+++.|.+|.+++|+|++ |+++.++|+ ..+.|..+|...+. ...+.+++.++ +.+..+||||||
T Consensus 131 ~~~~~~~~~L~~~l~~g~~----------~~~~~~~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~-~~~~~~vLDvG~ 199 (359)
T 1x19_A 131 FLADDFYMGLSQAVRGQKN----------FKGQVPYPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK-LDGVKKMIDVGG 199 (359)
T ss_dssp HHHHHTGGGHHHHHTTSCC----------CCCSSCSSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCC-CTTCCEEEEESC
T ss_pred HHHHHHHHHHHHHHhcCCC----------CcccccCchhhHHHHHHHHHHHHhccchhHHHHHHhcC-CCCCCEEEEECC
Confidence 5678899999999998875 788889999 99999999999988 77788899998 888899999999
Q ss_pred CCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 85 GIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 85 g~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
|+|.++..+++++|+++++++|+|.+++.++
T Consensus 200 G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 230 (359)
T 1x19_A 200 GIGDISAAMLKHFPELDSTILNLPGAIDLVN 230 (359)
T ss_dssp TTCHHHHHHHHHCTTCEEEEEECGGGHHHHH
T ss_pred cccHHHHHHHHHCCCCeEEEEecHHHHHHHH
Confidence 9999999999999999999999999988765
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.65 E-value=3.4e-16 Score=113.79 Aligned_cols=101 Identities=16% Similarity=0.096 Sum_probs=90.5
Q ss_pred CcchhhccCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCC--CCCceEEEecCC
Q 043449 8 EINVVWGRYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGF--EGLKSVVDVGGG 85 (118)
Q Consensus 8 ~~~~~~~w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~--~~~~~vvDvGGg 85 (118)
++..++.|.+|.+++++|+++|+ + |+++.++|+..+.|..+|..........+++.++ + .+..+|+|||||
T Consensus 103 ~~~~~~~~~~l~~~l~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vlDvG~G 175 (335)
T 2r3s_A 103 SPMITNGFNDLTAAVLKGGTAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIAQLVN-ENKIEPLKVLDISAS 175 (335)
T ss_dssp CHHHHGGGTTHHHHHHHTSCCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHHHHHT-C--CCCSEEEEETCT
T ss_pred chhhHHHHHhHHHHHhcCCCCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHHHHHHhcc-cccCCCCEEEEECCC
Confidence 44788999999999999998775 3 8999999999999999999988877778888888 8 788999999999
Q ss_pred CcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 86 IGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 86 ~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+|.++..+++++|+.+++.+|++.+++.++
T Consensus 176 ~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 205 (335)
T 2r3s_A 176 HGLFGIAVAQHNPNAEIFGVDWASVLEVAK 205 (335)
T ss_dssp TCHHHHHHHHHCTTCEEEEEECHHHHHHHH
T ss_pred cCHHHHHHHHHCCCCeEEEEecHHHHHHHH
Confidence 999999999999999999999998887664
No 16
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.58 E-value=3.3e-15 Score=109.50 Aligned_cols=98 Identities=21% Similarity=0.294 Sum_probs=80.9
Q ss_pred chhhccCchHHHHhcCCch-hhhccCCCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCC-CceEEEecCCCc
Q 043449 10 NVVWGRYHLKDAVLEGGIP-FNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEG-LKSVVDVGGGIG 87 (118)
Q Consensus 10 ~~~~~w~~L~~~vr~g~~~-f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~-~~~vvDvGGg~G 87 (118)
..++.|.+|.+++|+|++. |+.. .++.++|+..+.|..+|...... ...+++.++ +.+ ..+|||||||+|
T Consensus 120 ~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~~~~-~~~~l~~~~-~~~~~~~vlDvG~G~G 191 (352)
T 3mcz_A 120 LQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRLSQP-MVDVVSELG-VFARARTVIDLAGGHG 191 (352)
T ss_dssp TTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHHHHH-HHHHHHTCG-GGTTCCEEEEETCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhhhhh-HHHHHHhCC-CcCCCCEEEEeCCCcC
Confidence 4688999999999999864 3322 12367899999999999984332 236788888 877 899999999999
Q ss_pred HHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 88 ASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 88 ~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
.++..+++++|+++++++|+|++++.++
T Consensus 192 ~~~~~l~~~~p~~~~~~~D~~~~~~~a~ 219 (352)
T 3mcz_A 192 TYLAQVLRRHPQLTGQIWDLPTTRDAAR 219 (352)
T ss_dssp HHHHHHHHHCTTCEEEEEECGGGHHHHH
T ss_pred HHHHHHHHhCCCCeEEEEECHHHHHHHH
Confidence 9999999999999999999999887764
No 17
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.31 E-value=1.1e-07 Score=65.76 Aligned_cols=51 Identities=18% Similarity=0.235 Sum_probs=41.2
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+++.++ .....+|+|||||+|.++..+++..| .+++..|. |..++.|+
T Consensus 80 ~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~ 131 (235)
T 1jg1_A 80 VAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAK 131 (235)
T ss_dssp HHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHH
T ss_pred HHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHH
Confidence 344556566 66678999999999999999999998 88999996 77776654
No 18
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.29 E-value=2.7e-07 Score=62.77 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=33.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++.| +++..|+ |.+++.++
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~ 77 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAR 77 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHH
Confidence 367999999999999999999988 8888898 77776654
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.23 E-value=2.3e-06 Score=58.60 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=40.7
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++......+..+|+|||||+|.++..+++++|..+++..|+ |..++.++
T Consensus 34 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 85 (234)
T 3dtn_A 34 VSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAK 85 (234)
T ss_dssp HHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 3444444123468999999999999999999999999999998 77776654
No 20
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.23 E-value=9.4e-07 Score=62.93 Aligned_cols=42 Identities=24% Similarity=0.498 Sum_probs=37.3
Q ss_pred CCceEEEecCCC---cHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGI---GASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~---G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
+..+|||||||+ |.++..+.+.+|+.+++.+|+ |.+++.|++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~ 122 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRA 122 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHH
Confidence 457999999999 999988889999999999999 888887653
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.18 E-value=2.5e-06 Score=57.44 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=42.2
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.++...+ .....+|+|||||+|.++..+++..|..+++..|. |..++.++
T Consensus 31 ~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~ 81 (204)
T 3e05_A 31 VTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIR 81 (204)
T ss_dssp HHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHH
T ss_pred HHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 3455556 66678999999999999999999999999999998 77776654
No 22
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.15 E-value=3.1e-06 Score=56.78 Aligned_cols=51 Identities=24% Similarity=0.244 Sum_probs=35.2
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
+++.++......+|+|+|||+|.++..+++.+|+.+++.+|+ |..++.+++
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~ 72 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARR 72 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------
T ss_pred HHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHH
Confidence 444444125678999999999999999999999999999998 788887765
No 23
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.13 E-value=1.8e-06 Score=61.14 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=38.9
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|+|||+|.++..+++. +|..+++.+|+ |..++.++
T Consensus 101 ~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 152 (275)
T 1yb2_A 101 YIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAM 152 (275)
T ss_dssp -----CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHH
T ss_pred HHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHH
Confidence 4455555 667789999999999999999998 89999999998 77776554
No 24
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.11 E-value=4.5e-06 Score=58.74 Aligned_cols=99 Identities=13% Similarity=0.078 Sum_probs=63.1
Q ss_pred cCchHHHHhcCCchhhhccCCCcccccccCchHHHHHHHHHHhcchh----hHHHHHHhcCCCCCCceEEEecCCCcHHH
Q 043449 15 RYHLKDAVLEGGIPFNMAYGMNTYEYHGKDPRYNKIFNNGMFSHSTI----TMKKFLENYKGFEGLKSVVDVGGGIGASL 90 (118)
Q Consensus 15 w~~L~~~vr~g~~~f~~~~g~~~~e~~~~~p~~~~~F~~~M~~~~~~----~~~~~~~~~~~~~~~~~vvDvGGg~G~~~ 90 (118)
|..+......|++......+..-+.++...|... .+...|...... ....++...+ .....+|+|+|||+|.++
T Consensus 37 ~g~~~~~~~ig~~~g~~v~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~ 114 (280)
T 1i9g_A 37 RGSIAHDAVIGLEQGSVVKSSNGALFLVLRPLLV-DYVMSMPRGPQVIYPKDAAQIVHEGD-IFPGARVLEAGAGSGALT 114 (280)
T ss_dssp TEEEEHHHHTTCCTTEEEECSSCCEEEEECCCHH-HHHTTSCSCSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHH
T ss_pred CceEEHHHhcCCCCceEEEecCCcEEEEeCCCHH-HHHhhccccceeecHHHHHHHHHHcC-CCCCCEEEEEcccccHHH
Confidence 4444444444555444433333334444556554 344555544433 2334556666 667789999999999999
Q ss_pred HHHHHH-CCCCcEEEeec-hHHhhhCC
Q 043449 91 NMIISK-YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 91 ~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..++++ .|..+++.+|. |..++.|+
T Consensus 115 ~~l~~~~~~~~~v~~vD~~~~~~~~a~ 141 (280)
T 1i9g_A 115 LSLLRAVGPAGQVISYEQRADHAEHAR 141 (280)
T ss_dssp HHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 999996 68899999998 77776654
No 25
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.11 E-value=2e-06 Score=56.33 Aligned_cols=49 Identities=14% Similarity=0.246 Sum_probs=40.7
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+++.++ .....+|+|||||+|.++..+++++|..+++..|. |..++.++
T Consensus 17 ~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~ 66 (178)
T 3hm2_A 17 AISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERIL 66 (178)
T ss_dssp HHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHH
T ss_pred HHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 444455 56678999999999999999999999999999998 66776654
No 26
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.10 E-value=1.1e-06 Score=60.25 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=36.6
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|+|||+|.++..++...|+.+.+..|. +..++.++
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar 90 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLS 90 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHH
Confidence 3578999999999999999999999999999998 66666554
No 27
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.09 E-value=2.6e-06 Score=65.22 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=45.2
Q ss_pred CcchhhccCchHHHHhcCCchhhhccC--------CCcccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceE
Q 043449 8 EINVVWGRYHLKDAVLEGGIPFNMAYG--------MNTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSV 79 (118)
Q Consensus 8 ~~~~~~~w~~L~~~vr~g~~~f~~~~g--------~~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~v 79 (118)
++..+..|.++.+.+++|.+... ..+ ...+++..........+.... .+......+++.++ ..+..+|
T Consensus 87 ~~~~~~~~~~ll~~~~~~~pl~~-i~~~r~~~~~~~~~~~~y~~~~~~~~~L~d~~--~t~~~~~~il~~l~-~~~~~~V 162 (480)
T 3b3j_A 87 TPHDFCSFYNILKTCRGHTLERS-VFSERTEESSAVQYFQFYGYLSQQQNMMQDYV--RTGTYQRAILQNHT-DFKDKIV 162 (480)
T ss_dssp ----------------------------------CCEEEEGGGCSCHHHHHHHHHH--HHHHHHHHHHHTGG-GTTTCEE
T ss_pred CHHHHHHHHHHHHHHHcCCcHHH-HHhhhhhhhchhhHHHHHhhhccchhhhcChH--hHHHHHHHHHHhhh-hcCCCEE
Confidence 44556677777777776655221 121 123343333222111111111 11112334555555 4456799
Q ss_pred EEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 80 VDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 80 vDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+|||||+|.++..+++ .|..+++..|+.++++.|+
T Consensus 163 LDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~ 197 (480)
T 3b3j_A 163 LDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAE 197 (480)
T ss_dssp EEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHH
T ss_pred EEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHH
Confidence 9999999999998887 6888999999977665543
No 28
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.06 E-value=3e-06 Score=57.93 Aligned_cols=41 Identities=27% Similarity=0.361 Sum_probs=35.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++.+|+.+++..|. |..++.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~ 79 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAV 79 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHH
Confidence 357899999999999999999999999999998 66666543
No 29
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.05 E-value=2.1e-06 Score=59.70 Aligned_cols=52 Identities=13% Similarity=0.115 Sum_probs=43.2
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...++...+ .....+|+|+|||+|.++..+++. .|..+++.+|+ |..++.|+
T Consensus 82 ~~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~ 135 (255)
T 3mb5_A 82 AALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAW 135 (255)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHH
T ss_pred HHHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHH
Confidence 334556666 667789999999999999999999 89999999998 77777654
No 30
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.03 E-value=3.9e-06 Score=57.05 Aligned_cols=41 Identities=29% Similarity=0.373 Sum_probs=36.1
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++.+|+.+++..|. |..++.|+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~ 82 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYAL 82 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHH
Confidence 357899999999999999999999999999998 77776653
No 31
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.02 E-value=3.3e-06 Score=57.31 Aligned_cols=42 Identities=19% Similarity=0.268 Sum_probs=36.4
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|.++..++++.|..+++..|+ |..++.++
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~ 70 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQ 70 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999999999999999998 77776653
No 32
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.01 E-value=4.1e-06 Score=59.81 Aligned_cols=42 Identities=21% Similarity=0.360 Sum_probs=37.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||+|.++..+++++|..+++.+|+ |..++.|++
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~ 88 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQ 88 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 468999999999999999999999999999998 777877653
No 33
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.01 E-value=1.6e-05 Score=55.60 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=41.2
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPAY 117 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~~ 117 (118)
..+.+.++ .....+|+|||||+|.++..+++ |..+++..|+ |..++.+++.
T Consensus 24 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~ 75 (261)
T 3ege_A 24 NAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH 75 (261)
T ss_dssp HHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC
T ss_pred HHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc
Confidence 34555565 56678999999999999999998 7889999998 7778777653
No 34
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.00 E-value=4.4e-06 Score=59.14 Aligned_cols=43 Identities=23% Similarity=0.270 Sum_probs=36.7
Q ss_pred CCCceEEEecCCCcHHHHHHHHHC--CCCcEEEeec-hHHhhhCCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKY--PSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~--P~l~~~v~Dl-p~vi~~a~~ 116 (118)
....+|+|||||+|.++..++++. |+++++..|+ |..++.|++
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~ 114 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRR 114 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHH
Confidence 456799999999999999999985 6789999998 788877653
No 35
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.00 E-value=3.7e-06 Score=56.53 Aligned_cols=48 Identities=17% Similarity=0.285 Sum_probs=38.2
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .... +|+|||||+|.++..++++ |..+++..|+ |..++.++
T Consensus 35 ~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~ 83 (219)
T 3dlc_A 35 NIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIAL 83 (219)
T ss_dssp HHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHH
Confidence 4455555 4434 9999999999999999999 8899999998 77776553
No 36
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.99 E-value=5.7e-06 Score=57.27 Aligned_cols=50 Identities=20% Similarity=0.310 Sum_probs=41.2
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..+++++|..+++..|+ |..++.++
T Consensus 24 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~ 74 (259)
T 2p35_A 24 DLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAA 74 (259)
T ss_dssp HHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 4555555 55678999999999999999999999999999998 66666553
No 37
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.99 E-value=2.5e-06 Score=62.26 Aligned_cols=40 Identities=15% Similarity=0.313 Sum_probs=36.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
.+|+|||||.|.++..+++.+|+.++++.|+ |.+++.|++
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~ 131 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSRE 131 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHH
Confidence 4899999999999999999999999999998 888888764
No 38
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.98 E-value=5.1e-06 Score=57.22 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=35.2
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
...+|+|||||+|.++..+++++|+.+++..|. |..++.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a 74 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGAC 74 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHH
Confidence 457899999999999999999999999999998 6666554
No 39
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.98 E-value=1.5e-05 Score=57.24 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=43.3
Q ss_pred HHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 55 MFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 55 M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+..........+++.++......+|+|||||+|.++..+++++ ..+++.+|+ |..++.|+
T Consensus 97 ~~~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~ 157 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGN 157 (312)
T ss_dssp HHHHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 4333333334455555434567899999999999999999986 678999998 77776654
No 40
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.98 E-value=1e-05 Score=54.87 Aligned_cols=40 Identities=23% Similarity=0.225 Sum_probs=34.9
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhh
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQ 112 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~ 112 (118)
.....+|+|||||+|.++..+++.+|..+++..|+ |..++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~ 65 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRME 65 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGH
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHH
Confidence 45568999999999999999999999999999998 55444
No 41
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.98 E-value=3.7e-06 Score=57.08 Aligned_cols=42 Identities=24% Similarity=0.339 Sum_probs=36.6
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+..+|+|||||+|.++..++++.|..+++..|+ |..++.++
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~ 70 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAK 70 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence 3467999999999999999999999999999998 77776654
No 42
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.96 E-value=1.3e-05 Score=55.48 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=40.3
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++..+ .....+|+|||||+|.++..+++++ ..+++..|+ |..++.++
T Consensus 26 ~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~ 76 (256)
T 1nkv_A 26 ATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAK 76 (256)
T ss_dssp HHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHH
Confidence 34555566 6677899999999999999999998 678999998 77766653
No 43
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.94 E-value=5.9e-06 Score=57.52 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=35.3
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.+..+|||||||+|.++..+++.+|+.+++..|+ +.+++.|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A 86 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYV 86 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHH
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHH
Confidence 3457899999999999999999999999999998 6666544
No 44
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.94 E-value=2e-05 Score=52.95 Aligned_cols=50 Identities=16% Similarity=0.126 Sum_probs=38.4
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++.+.......+|+|||||+|.++..++++ ..+++..|+ |..++.++
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~ 85 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAG 85 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHG
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHH
Confidence 344444443455679999999999999999999 668999998 77777654
No 45
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.94 E-value=5.5e-06 Score=56.06 Aligned_cols=51 Identities=24% Similarity=0.280 Sum_probs=42.4
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++.++ .....+|+|||||+|.++..+++.. |..+++..|. |..++.++
T Consensus 27 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 79 (219)
T 3dh0_A 27 EKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAW 79 (219)
T ss_dssp HHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH
Confidence 45666666 6777899999999999999999997 8899999998 77776553
No 46
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.94 E-value=9.8e-06 Score=56.81 Aligned_cols=43 Identities=23% Similarity=0.447 Sum_probs=37.8
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..+++.+|..+++..|. |..++.++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 78 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAR 78 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 56678999999999999999999999999999998 77766543
No 47
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.93 E-value=5.2e-06 Score=57.52 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=50.5
Q ss_pred CchHHHHHHHHHHhcchhh----HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeec-hHHhhhCC
Q 043449 44 DPRYNKIFNNGMFSHSTIT----MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 44 ~p~~~~~F~~~M~~~~~~~----~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+|... .|...|....... ...+++..+ .....+|+|+|||+|.++..+++. .|..+++.+|. |..++.++
T Consensus 63 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~ 138 (258)
T 2pwy_A 63 RPTLE-EYLLHMKRSATPTYPKDASAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAE 138 (258)
T ss_dssp CCCHH-HHHHHSCCSSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCCHH-HHhhcCccccccccchHHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 45443 3445554443322 234566666 777789999999999999999999 78999999997 77776654
No 48
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.93 E-value=1.1e-05 Score=57.53 Aligned_cols=49 Identities=18% Similarity=0.381 Sum_probs=40.6
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..++++++ .+++..|+ |..++.|+
T Consensus 63 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~ 112 (302)
T 3hem_A 63 LALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDK 112 (302)
T ss_dssp HHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHH
T ss_pred HHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHH
Confidence 4556666 66778999999999999999999988 89999998 77776654
No 49
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=97.92 E-value=8.3e-06 Score=56.75 Aligned_cols=53 Identities=25% Similarity=0.337 Sum_probs=41.6
Q ss_pred hhhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 60 TITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
......+++.++ .....+|+|||||+|.++..++++.+ +++..|+ |..++.++
T Consensus 23 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~ 76 (260)
T 1vl5_A 23 GSDLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVAR 76 (260)
T ss_dssp CCCHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHH
Confidence 334455666666 66778999999999999999999986 8899997 66766543
No 50
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.91 E-value=1.5e-05 Score=54.54 Aligned_cols=50 Identities=18% Similarity=0.133 Sum_probs=38.2
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+.+.++ .....+|+|||||+|.++..++++.+ .+++..|. |..++.++
T Consensus 33 ~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~ 83 (243)
T 3bkw_A 33 PALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARAR 83 (243)
T ss_dssp HHHHHHSC-CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHH
T ss_pred HHHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHH
Confidence 44556666 55678999999999999999998833 37888998 67766654
No 51
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.90 E-value=8.4e-06 Score=56.68 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=35.6
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.+..+|+|||||+|.++..+++.+|+.+++.+|. +.+++.+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a 89 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYV 89 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHH
Confidence 3567899999999999999999999999999996 6666544
No 52
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.89 E-value=2.6e-05 Score=53.66 Aligned_cols=48 Identities=25% Similarity=0.416 Sum_probs=35.8
Q ss_pred HHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 67 LENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
....+......+|+|||||+|.++..+++. ..+++..|+ |..++.+++
T Consensus 33 ~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~ 81 (240)
T 3dli_A 33 RRYIPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEG 81 (240)
T ss_dssp GGGGGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHT
T ss_pred HHHHhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHh
Confidence 333332445689999999999999999998 557888998 666666543
No 53
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.89 E-value=1.6e-05 Score=54.95 Aligned_cols=49 Identities=20% Similarity=0.234 Sum_probs=38.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+.+.++ .....+|+|||||+|.++..++++.+. +++..|+ |..++.++
T Consensus 35 ~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~ 84 (253)
T 3g5l_A 35 ELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAK 84 (253)
T ss_dssp HHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHH
T ss_pred HHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHH
Confidence 4455555 446789999999999999999999775 8999998 77776654
No 54
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.87 E-value=5.1e-06 Score=57.65 Aligned_cols=41 Identities=15% Similarity=0.080 Sum_probs=34.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||.|..+..+++..|. +.+..|+ |.+++.|++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~ 101 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRD 101 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHH
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHH
Confidence 4579999999999999999988875 6788887 888887753
No 55
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.87 E-value=1.9e-05 Score=58.69 Aligned_cols=50 Identities=22% Similarity=0.287 Sum_probs=41.3
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|+|||+|.++..+++++|..+++..|. |..++.++
T Consensus 213 ~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar 263 (375)
T 4dcm_A 213 FFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSR 263 (375)
T ss_dssp HHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHH
Confidence 3556665 44458999999999999999999999999999998 77776654
No 56
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.87 E-value=2.7e-05 Score=55.40 Aligned_cols=42 Identities=31% Similarity=0.348 Sum_probs=36.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|.++..+++++ |..+++..|+ |..++.|+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 78 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAE 78 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Confidence 457899999999999999999997 8999999998 77776654
No 57
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.86 E-value=1.3e-06 Score=61.12 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=36.7
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
.+..+|+|||||+|..+..++++.| ..+++.+|+ |..++.|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 105 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVAR 105 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHH
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3468999999999999999999998 889999998 77776654
No 58
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=97.86 E-value=2.5e-05 Score=54.58 Aligned_cols=49 Identities=16% Similarity=0.290 Sum_probs=40.0
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
..+++..+ .....+|+|||||+|.++..+++++ ..+++..|+ |..++.+
T Consensus 51 ~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a 100 (273)
T 3bus_A 51 DEMIALLD-VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQA 100 (273)
T ss_dssp HHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHH
Confidence 44566666 6677899999999999999999987 689999998 6666554
No 59
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.86 E-value=2.1e-05 Score=54.42 Aligned_cols=49 Identities=16% Similarity=0.221 Sum_probs=38.4
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+++.+.......+|+|||||+|.++..++++.|. +++..|+ |..++.++
T Consensus 37 ~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~ 86 (257)
T 3f4k_A 37 AVSFINELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFN 86 (257)
T ss_dssp HHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHH
Confidence 3444432556679999999999999999999986 9999998 66666543
No 60
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.85 E-value=5.8e-06 Score=59.56 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=36.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
+..+|+|||||+|..+..+++..|..+++..|+ |.+++.|++
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~ 125 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQ 125 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHH
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 468999999999999999999878889999998 888887654
No 61
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.84 E-value=1.7e-05 Score=56.11 Aligned_cols=42 Identities=21% Similarity=0.268 Sum_probs=36.3
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhhC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQDA 114 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a 114 (118)
..+..+|+|||||+|.++..+++.+|. .+++..|+ |..++.+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a 63 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEA 63 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHH
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 556789999999999999999999995 89999998 6666544
No 62
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.84 E-value=1.3e-05 Score=55.48 Aligned_cols=49 Identities=24% Similarity=0.468 Sum_probs=39.4
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..+++++ ..+++..|+ |..++.++
T Consensus 46 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~ 95 (266)
T 3ujc_A 46 KILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMAN 95 (266)
T ss_dssp HHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHH
Confidence 4445555 5667899999999999999999998 789999998 66666554
No 63
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.83 E-value=3.9e-05 Score=51.21 Aligned_cols=45 Identities=20% Similarity=0.196 Sum_probs=36.6
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCC--CCcEEEeechH
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYP--SIKGINFDLPH 109 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P--~l~~~v~Dlp~ 109 (118)
.+.+.|..+....+|+|||||+|.++..+++++| ..+++.+|+.+
T Consensus 12 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 12 ELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 3555565235567999999999999999999998 68899999854
No 64
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.82 E-value=1.9e-05 Score=55.13 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=35.9
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..+++. |..+++..|+ |..++.++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~ 86 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFN 86 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHH
Confidence 456789999999999999999998 8889999998 77666543
No 65
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.80 E-value=1.5e-05 Score=53.49 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=35.3
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|.++..+++.+|..+++..|. |..++.++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~ 106 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLR 106 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 57999999999999999999999999999998 66666543
No 66
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.80 E-value=2.7e-05 Score=50.81 Aligned_cols=47 Identities=21% Similarity=0.157 Sum_probs=37.5
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+.+.++ .....+|+|||||+|.++..+++ +..+++..|. |..++.++
T Consensus 27 ~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~ 74 (183)
T 2yxd_A 27 SIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTK 74 (183)
T ss_dssp HHHHHC-CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHH
T ss_pred HHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHH
Confidence 444455 55667999999999999999998 8889999997 66666543
No 67
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.80 E-value=1.9e-05 Score=53.31 Aligned_cols=48 Identities=23% Similarity=0.313 Sum_probs=37.3
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++.++ ....+|+|||||+|.++..+++. + .+++..|. |..++.++
T Consensus 23 ~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~ 71 (230)
T 3cc8_A 23 PNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAK 71 (230)
T ss_dssp HHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHH
T ss_pred HHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHH
Confidence 44555544 35679999999999999999998 5 88999998 66666554
No 68
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.79 E-value=3.1e-05 Score=54.58 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=42.3
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..++...+ .....+|+|+|||+|.++..++++ .|..+++.+|. |..++.|+
T Consensus 102 ~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 154 (277)
T 1o54_A 102 SFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAE 154 (277)
T ss_dssp HHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHH
T ss_pred HHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH
Confidence 34566666 667789999999999999999999 78999999998 77776654
No 69
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=97.79 E-value=1.4e-05 Score=56.11 Aligned_cols=42 Identities=19% Similarity=0.193 Sum_probs=36.0
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|..++.++..+|+.+++..|. +..++.++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~ 121 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVE 121 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 3567999999999999999999999999999996 66665543
No 70
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.78 E-value=1.8e-05 Score=55.65 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=37.4
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|+|||+|.++..+++++|..+++.+|+ |..++.|+
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~ 77 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFAR 77 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 44567999999999999999999999999999998 77776654
No 71
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.78 E-value=2e-05 Score=54.13 Aligned_cols=41 Identities=7% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhh
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQD 113 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~ 113 (118)
.....+|+|||||+|.++..+++.+|..+++..|. |..++.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~ 113 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRE 113 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHH
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHH
Confidence 45667999999999999999999999888999998 555544
No 72
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.78 E-value=8.1e-06 Score=58.12 Aligned_cols=42 Identities=26% Similarity=0.341 Sum_probs=36.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
+..+|+|||||+|.++.++++..|..+++++|+ |.+++.|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~ 117 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKK 117 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHH
Confidence 457999999999999999998878889999998 888887654
No 73
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.77 E-value=1.3e-05 Score=58.54 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=41.1
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++.++ .....+|+|||||+|.++..+++++|+.+++..|. |..++.++
T Consensus 186 ~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~ 237 (343)
T 2pjd_A 186 QLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASR 237 (343)
T ss_dssp HHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHH
T ss_pred HHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 44566665 44457899999999999999999999999999998 66666553
No 74
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.77 E-value=2.3e-05 Score=54.16 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=31.2
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
...+|+|||||+|.++..+++++|..+++..|+-
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s 57 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPV 57 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCC
Confidence 4578999999999999999999999999999984
No 75
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.76 E-value=2.9e-05 Score=56.21 Aligned_cols=51 Identities=25% Similarity=0.349 Sum_probs=42.0
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++.++ .....+|||+|||+|..+..+++++|..+++.+|. |..++.|+
T Consensus 16 ~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~ 67 (301)
T 1m6y_A 16 REVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAE 67 (301)
T ss_dssp HHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 34555555 55668999999999999999999999889999998 77777654
No 76
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=97.75 E-value=3e-05 Score=54.89 Aligned_cols=49 Identities=12% Similarity=0.289 Sum_probs=38.6
Q ss_pred HHHHHhc----CCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 64 KKFLENY----KGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 64 ~~~~~~~----~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
..+++.+ + .....+|+|||||+|.++..+++++ ..+++..|+ |..++.+
T Consensus 68 ~~l~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a 121 (297)
T 2o57_A 68 EWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRN 121 (297)
T ss_dssp HHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHH
T ss_pred HHHHHHhhhccC-CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHH
Confidence 3455555 4 6677899999999999999999987 458999998 6666554
No 77
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.75 E-value=3.4e-05 Score=52.34 Aligned_cols=47 Identities=17% Similarity=0.158 Sum_probs=38.3
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
++..++ .....+|+|||||+|.++..+++. ..+++.+|+ |..++.|+
T Consensus 47 ~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~ 94 (204)
T 3njr_A 47 TLAALA-PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQ 94 (204)
T ss_dssp HHHHHC-CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHhcC-CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHH
Confidence 444555 666789999999999999999998 788999998 77776654
No 78
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.74 E-value=1.5e-05 Score=56.90 Aligned_cols=39 Identities=23% Similarity=0.264 Sum_probs=35.0
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|.++..+++. |+.+++..|+ |..++.|+
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~ 163 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIAR 163 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHH
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Confidence 468999999999999999999 9999999998 77777664
No 79
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.74 E-value=4e-05 Score=50.19 Aligned_cols=41 Identities=12% Similarity=-0.015 Sum_probs=34.6
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|+|||+|.++..++++ +..+++.+|+ |..++.++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~ 71 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQ 71 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHH
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHH
Confidence 35679999999999999999987 7778999998 77776654
No 80
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.73 E-value=1.3e-05 Score=55.82 Aligned_cols=41 Identities=15% Similarity=0.017 Sum_probs=35.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.+++.+++..|..+++..|. |..++.|+
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~ 56 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV 56 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 457899999999999999999999999999998 66666654
No 81
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.73 E-value=2.5e-05 Score=55.46 Aligned_cols=50 Identities=10% Similarity=0.068 Sum_probs=39.1
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+++..+ .....+|+|||||+|.++..++++ ..+++..|+ |..++.|+
T Consensus 34 ~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar 84 (261)
T 3iv6_A 34 RENDIFLEN-IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLA 84 (261)
T ss_dssp HHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHH
Confidence 344556566 666789999999999999999987 457899998 66776654
No 82
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.73 E-value=3.3e-05 Score=54.40 Aligned_cols=49 Identities=20% Similarity=0.307 Sum_probs=38.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..++++++. +++..|+ |..++.++
T Consensus 55 ~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~ 104 (287)
T 1kpg_A 55 LALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQ 104 (287)
T ss_dssp HHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHH
T ss_pred HHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHH
Confidence 4555555 666789999999999999999988764 9999998 66666543
No 83
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.73 E-value=3.4e-05 Score=52.21 Aligned_cols=45 Identities=7% Similarity=0.007 Sum_probs=36.1
Q ss_pred HhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 68 ENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 68 ~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+. .....+|+|||||+|..+..++++ ..+++..|+ |..++.|+
T Consensus 16 ~~l~-~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~ 61 (203)
T 1pjz_A 16 SSLN-VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYF 61 (203)
T ss_dssp HHHC-CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHH
T ss_pred Hhcc-cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHH
Confidence 3344 556689999999999999999997 568999998 67777654
No 84
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.72 E-value=4.3e-05 Score=53.91 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=35.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++.+|+.+++..|. |..++.++
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~ 150 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQ 150 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHH
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 356899999999999999999999999999998 67666554
No 85
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.71 E-value=1.7e-05 Score=54.91 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=36.1
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|..+..+++..|+.+++.+|. |..++.++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~ 111 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLE 111 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 4567999999999999999999999999999998 66666543
No 86
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.71 E-value=1.1e-05 Score=55.02 Aligned_cols=43 Identities=14% Similarity=0.114 Sum_probs=36.4
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
..+..+|+|||||+|..+..+++..| ..+++..|. |..++.|+
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 111 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGR 111 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHH
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 34567999999999999999999988 789999998 77766554
No 87
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=97.71 E-value=2.1e-05 Score=54.99 Aligned_cols=43 Identities=14% Similarity=0.275 Sum_probs=36.7
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeech
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDLP 108 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dlp 108 (118)
.+++.++ .....+|+|||||+|.++..+++++ |+.+++..|+-
T Consensus 34 ~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s 77 (275)
T 3bkx_A 34 AIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIA 77 (275)
T ss_dssp HHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSS
T ss_pred HHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECC
Confidence 4556666 6677899999999999999999996 88999999984
No 88
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.71 E-value=1.4e-05 Score=55.57 Aligned_cols=41 Identities=12% Similarity=0.154 Sum_probs=35.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++++|..+++.+|+ |..++.|+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~ 106 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAK 106 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 356899999999999999999999999999998 77776654
No 89
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.70 E-value=2e-05 Score=54.39 Aligned_cols=43 Identities=23% Similarity=0.298 Sum_probs=37.3
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+..+|+|||||+|..+..+++..|..+++.+|+ |..++.|+
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~ 112 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAK 112 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHH
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 34568999999999999999999999999999998 77777654
No 90
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.70 E-value=3.7e-05 Score=52.96 Aligned_cols=48 Identities=17% Similarity=0.259 Sum_probs=38.7
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
..+++..+ .....+|+|||||+|.++..+++..+ +++..|+ |..++.+
T Consensus 11 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a 59 (239)
T 1xxl_A 11 GLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVA 59 (239)
T ss_dssp HHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHH
T ss_pred chHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHH
Confidence 34566666 77788999999999999999999876 7888897 6666654
No 91
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.69 E-value=5.1e-05 Score=50.26 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=38.1
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+.+.++ .....+|+|||||+|.++..+++. ..+++..|. |..++.++
T Consensus 23 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 71 (199)
T 2xvm_A 23 EVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVE 71 (199)
T ss_dssp HHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 4555566 555679999999999999999988 668999998 77776553
No 92
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.69 E-value=2.2e-05 Score=51.85 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=34.6
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..++++ ..+++.+|+ |..++.|+
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~ 61 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTS 61 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHH
Confidence 345679999999999999999988 788999998 77777654
No 93
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.68 E-value=4.7e-05 Score=51.36 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=39.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++..+ .....+|+|||||+|.++..+++.. |+.+++..|. |..++.++
T Consensus 68 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~ 119 (215)
T 2yxe_A 68 MMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAE 119 (215)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHH
T ss_pred HHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 3455555 5667899999999999999999998 7789999997 66666543
No 94
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.68 E-value=0.00011 Score=48.71 Aligned_cols=44 Identities=23% Similarity=0.154 Sum_probs=35.3
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC---------CcEEEeechH
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPS---------IKGINFDLPH 109 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~---------l~~~v~Dlp~ 109 (118)
+.+.+..+....+|+|||||+|.++..++++++. .+++..|+-+
T Consensus 13 l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~ 65 (196)
T 2nyu_A 13 VNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLH 65 (196)
T ss_dssp HHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSC
T ss_pred HHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechh
Confidence 4445552455689999999999999999999875 7899999754
No 95
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=97.68 E-value=4.3e-05 Score=54.70 Aligned_cols=50 Identities=14% Similarity=0.333 Sum_probs=39.6
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++.++ .....+|+|||||+|.++..+++++ ..+++..|+ |..++.++
T Consensus 80 ~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~ 130 (318)
T 2fk8_A 80 DLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCE 130 (318)
T ss_dssp HHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHH
Confidence 34555555 6667899999999999999999987 569999998 77666553
No 96
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.68 E-value=4.4e-05 Score=53.71 Aligned_cols=48 Identities=19% Similarity=0.239 Sum_probs=38.6
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..+++ |..+++..|+ |..++.++
T Consensus 48 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~ 96 (279)
T 3ccf_A 48 DLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKAR 96 (279)
T ss_dssp HHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHH
T ss_pred HHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHH
Confidence 4555555 56678999999999999999998 7889999998 66666543
No 97
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.68 E-value=1.7e-05 Score=54.63 Aligned_cols=49 Identities=20% Similarity=0.377 Sum_probs=38.5
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..++++. ..+++..|. |..++.++
T Consensus 84 ~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~ 133 (254)
T 1xtp_A 84 NFIASLP-GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAK 133 (254)
T ss_dssp HHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHH
T ss_pred HHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHH
Confidence 4555555 5567899999999999999999987 557889997 77776654
No 98
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.67 E-value=5.6e-05 Score=57.22 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=39.1
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.+++..+ .....+|+|||||+|.+++.+++.++.-+++..|+ |..++.|
T Consensus 164 ~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelA 213 (438)
T 3uwp_A 164 QMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYA 213 (438)
T ss_dssp HHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 4455555 66778999999999999999999988777999998 4555544
No 99
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.65 E-value=4.4e-05 Score=54.08 Aligned_cols=41 Identities=12% Similarity=0.001 Sum_probs=36.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPAY 117 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~~ 117 (118)
...+|+|||||+|.++.++++. + .+++..|+ |.+++.|+++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~ 113 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISF 113 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTT
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHH
Confidence 4579999999999999999998 8 89999998 8899988763
No 100
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.65 E-value=2.5e-05 Score=55.05 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=35.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.+++.+++..|..+++..|. |..++.|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~ 62 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQ 62 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 457899999999999999999999999999998 66666654
No 101
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.65 E-value=2.6e-05 Score=56.16 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=37.0
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
....+|+|||||.|.++..+++..|..+++..|+ |.+++.+++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~ 137 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQ 137 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 3457999999999999999999888889999998 788876653
No 102
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.65 E-value=3.9e-05 Score=52.62 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=36.4
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|..+..+++.+|..+++.+|. |..++.|+
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~ 95 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAH 95 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHH
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 3457999999999999999999999999999998 77766554
No 103
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.65 E-value=1.8e-05 Score=58.01 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=37.5
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
....+|+|||||+|..+..+++..|..+++..|+ |.+++.|++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~ 162 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQ 162 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 3568999999999999999999888899999998 788877653
No 104
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.65 E-value=8.1e-05 Score=56.42 Aligned_cols=49 Identities=8% Similarity=0.194 Sum_probs=39.1
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.+++..+ .....+|+|||||+|.++..+++.+|..+++.+|+ |..++.|
T Consensus 233 ~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A 282 (433)
T 1u2z_A 233 DVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT 282 (433)
T ss_dssp HHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 3455555 66678999999999999999999999888999998 4454444
No 105
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.64 E-value=5.6e-05 Score=49.63 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=38.3
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.+. .....+|+|||||+|.++..+++. ..+++..|+ |..++.++
T Consensus 43 ~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~ 91 (194)
T 1dus_A 43 ILVENVV-VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAK 91 (194)
T ss_dssp HHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHH
T ss_pred HHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 4555555 566789999999999999999998 778999998 66666543
No 106
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.64 E-value=3.3e-05 Score=52.52 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=36.4
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
.+..+|+|||||+|..+..++++.| +.+++..|+ |..++.|+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 100 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIAR 100 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3468999999999999999999998 789999998 77776654
No 107
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.64 E-value=1.7e-05 Score=57.74 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=36.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||+|.++..+++..|..+++..|+ |.+++.|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~ 158 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKI 158 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 457999999999999999999888899999998 888877653
No 108
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.64 E-value=8.1e-05 Score=51.17 Aligned_cols=41 Identities=20% Similarity=0.391 Sum_probs=34.0
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..+++..+ +++..|. |..++.++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~ 95 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAA 95 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHH
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHH
Confidence 34567899999999999999999998 7888887 66776653
No 109
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.63 E-value=4.6e-05 Score=55.75 Aligned_cols=52 Identities=19% Similarity=0.018 Sum_probs=43.4
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
+..++...+ |....+|+|+|||+|.+++.++... |+.+++..|. |..++.|+
T Consensus 192 a~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~ 245 (354)
T 3tma_A 192 AQALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAR 245 (354)
T ss_dssp HHHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHH
T ss_pred HHHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHH
Confidence 344555556 8778899999999999999999998 9999999998 77777664
No 110
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=97.63 E-value=3.1e-05 Score=51.62 Aligned_cols=43 Identities=21% Similarity=0.281 Sum_probs=35.9
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|+|||+|.++..++++. |..+++.+|+ |..++.|+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 64 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTT 64 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 3456799999999999999999996 7789999998 67776654
No 111
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.63 E-value=2.4e-05 Score=54.65 Aligned_cols=41 Identities=15% Similarity=-0.034 Sum_probs=35.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+..+|+|||+|+|.+++.+++..|..+++..|. |..++.|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~ 62 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSAL 62 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 457899999999999999999999999999998 66666654
No 112
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.62 E-value=1.9e-05 Score=56.80 Aligned_cols=42 Identities=29% Similarity=0.383 Sum_probs=36.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||+|.++..+++..|..+++..|+ |.+++.+++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~ 132 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARK 132 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHH
Confidence 347999999999999999999888899999998 788876653
No 113
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.62 E-value=1.9e-05 Score=57.05 Aligned_cols=43 Identities=21% Similarity=0.329 Sum_probs=37.5
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
....+|+|||||+|.++..+++..|..+++..|+ |.+++.|++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~ 137 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKK 137 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 3568999999999999999999888899999998 888877653
No 114
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.62 E-value=6.5e-05 Score=54.91 Aligned_cols=49 Identities=22% Similarity=0.189 Sum_probs=37.1
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
.+.+... ..+..+|+|||||+|.++..++++ +..+++..|..++++.|+
T Consensus 55 ~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~ 103 (340)
T 2fyt_A 55 FIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAM 103 (340)
T ss_dssp HHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHH
T ss_pred HHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHH
Confidence 3444444 455679999999999999999987 556899999866666553
No 115
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.62 E-value=1.8e-05 Score=56.42 Aligned_cols=40 Identities=23% Similarity=0.336 Sum_probs=35.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++. |..+++..|+ |.+++.|+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar 115 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSK 115 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHH
Confidence 4578999999999999999998 8889999998 88887765
No 116
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.61 E-value=4e-05 Score=52.10 Aligned_cols=41 Identities=24% Similarity=0.149 Sum_probs=35.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|..+..+++++| ..+++.+|. |..++.|+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 106 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAK 106 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Confidence 457999999999999999999998 789999998 66666554
No 117
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.61 E-value=0.00019 Score=49.38 Aligned_cols=47 Identities=15% Similarity=0.283 Sum_probs=36.1
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+++... ..+..+|+|||||+|.++..+++. ..+++..|+ |..++.++
T Consensus 33 ~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~ 80 (252)
T 1wzn_A 33 IFKEDA-KREVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVAR 80 (252)
T ss_dssp HHHHTC-SSCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 344343 345679999999999999999987 568999998 77776654
No 118
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.60 E-value=4.4e-05 Score=53.02 Aligned_cols=41 Identities=22% Similarity=0.144 Sum_probs=36.2
Q ss_pred CCceEEEecCCCcHHHHHHHHH--CCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISK--YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~--~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++. +|..+++..|+ |..++.|+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~ 94 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAA 94 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHH
Confidence 4578999999999999999998 88889999998 78877765
No 119
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.60 E-value=6.3e-05 Score=52.86 Aligned_cols=51 Identities=27% Similarity=0.468 Sum_probs=39.8
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
..+++..+ .....+|+|||||+|.++..++++ +..+++..|+ |..++.+++
T Consensus 21 ~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~ 72 (249)
T 3ftd_A 21 KKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKS 72 (249)
T ss_dssp HHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTT
T ss_pred HHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHh
Confidence 34556666 666789999999999999999987 5678888998 667766554
No 120
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.59 E-value=0.00012 Score=48.02 Aligned_cols=42 Identities=14% Similarity=0.017 Sum_probs=34.3
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|+|||+|.++..+++ .+..+++..|+ |..++.|+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~ 84 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIK 84 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHH
T ss_pred hcCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHH
Confidence 34567999999999999999887 56678999998 77776654
No 121
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.59 E-value=8.3e-05 Score=51.88 Aligned_cols=49 Identities=10% Similarity=0.262 Sum_probs=38.1
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++..+ .....+|+|||||+|.++..++++. .+++..|+ |..++.++
T Consensus 20 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~ 69 (244)
T 1qam_A 20 DKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTE 69 (244)
T ss_dssp HHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHH
T ss_pred HHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHH
Confidence 44555555 5667899999999999999999996 67888887 66665543
No 122
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.59 E-value=2.9e-05 Score=55.41 Aligned_cols=43 Identities=21% Similarity=0.189 Sum_probs=37.2
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
....+|+|||||.|..+..+++..|..+++..|+ |.+++.+++
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~ 120 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKI 120 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 3457999999999999999999888899999998 888877653
No 123
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.59 E-value=6.7e-05 Score=52.85 Aligned_cols=38 Identities=29% Similarity=0.392 Sum_probs=32.5
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|.++..+++. ..+++..|+ |..++.|+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 107 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAK 107 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHH
Confidence 569999999999999999998 678999998 77776654
No 124
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.59 E-value=2.3e-05 Score=56.92 Aligned_cols=42 Identities=26% Similarity=0.290 Sum_probs=37.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||+|..+..+++..|..+++..|+ |.+++.|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~ 150 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKK 150 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHH
Confidence 457999999999999999999888899999998 888887653
No 125
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.59 E-value=3e-05 Score=56.14 Aligned_cols=42 Identities=29% Similarity=0.401 Sum_probs=36.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||+|.++..+++..|..+++..|+ |.+++.|++
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~ 119 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKR 119 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHH
Confidence 457999999999999999999888889999998 788877653
No 126
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.59 E-value=4.4e-05 Score=51.57 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=36.6
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.+. .....+|+|||||+|.++..++++ ..+++..|. |..++.++
T Consensus 36 ~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 84 (220)
T 3hnr_A 36 DILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAK 84 (220)
T ss_dssp HHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHH
T ss_pred HHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHH
Confidence 3444443 345679999999999999999998 668999998 66666553
No 127
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.58 E-value=8.7e-05 Score=52.35 Aligned_cols=41 Identities=17% Similarity=0.135 Sum_probs=34.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPAY 117 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~~ 117 (118)
...+|+|||||+|.++..+++... +++..|+ |..++.|++.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~~ 80 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALRH 80 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCCC
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhhc
Confidence 347899999999999999998864 6788897 7788888764
No 128
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.57 E-value=4.4e-05 Score=49.39 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=33.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..++++.++ ++..|. |..++.++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~ 80 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLK 80 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHH
Confidence 4578999999999999999999877 899998 77776654
No 129
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.56 E-value=0.00011 Score=50.78 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=32.9
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.....+|+|||||+|.++..++++ ..+++..|. |..++.+
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a 77 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVF 77 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence 556789999999999999999987 567888997 6666554
No 130
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.56 E-value=6.8e-05 Score=52.15 Aligned_cols=39 Identities=21% Similarity=0.312 Sum_probs=32.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+..+|+|||||+|.++..++++.+ +++..|+ |..++.|+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~ 89 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIAR 89 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHH
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHH
Confidence 458999999999999999999864 6888898 77777654
No 131
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.55 E-value=0.00011 Score=49.34 Aligned_cols=41 Identities=15% Similarity=0.275 Sum_probs=33.6
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..++++ ..+++..|. |..++.++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 82 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEAS 82 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHH
Confidence 445679999999999999999988 568899998 66666553
No 132
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.55 E-value=4.2e-05 Score=51.62 Aligned_cols=41 Identities=20% Similarity=0.191 Sum_probs=35.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
+..+|+|||||+|..+..+++..| ..+++.+|. |..++.|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 98 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHAR 98 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 457999999999999999999998 789999998 77776654
No 133
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.54 E-value=7.7e-05 Score=48.97 Aligned_cols=47 Identities=19% Similarity=0.292 Sum_probs=35.3
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.+. ....+|+|||||.|.++..+++. ..+++..|. |..++.++
T Consensus 38 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~ 85 (195)
T 3cgg_A 38 RLIDAMA--PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAK 85 (195)
T ss_dssp HHHHHHS--CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhc--cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHH
Confidence 3444442 35679999999999999999988 568888897 66665543
No 134
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.54 E-value=0.00012 Score=49.11 Aligned_cols=48 Identities=13% Similarity=0.157 Sum_probs=38.4
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++..+ .....+|+|||||+|.++..+++. ..+++..|. |..++.++
T Consensus 68 ~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~ 116 (210)
T 3lbf_A 68 RMTELLE-LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQAR 116 (210)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHH
Confidence 4455566 667789999999999999999998 678899998 76666554
No 135
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.54 E-value=8.6e-05 Score=51.52 Aligned_cols=40 Identities=20% Similarity=0.096 Sum_probs=34.3
Q ss_pred CceEEEecCCCcHHHHHHHHH----CCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISK----YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~----~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|..+..+++. .|..+++..|+ |..++.|+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 478999999999999999998 79999999998 66666553
No 136
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.54 E-value=6.4e-05 Score=52.52 Aligned_cols=42 Identities=12% Similarity=0.210 Sum_probs=35.8
Q ss_pred CC-CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FE-GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~-~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.. ...+|+|+|||+|.++..++++.+. +++.+|+ |..++.|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~ 89 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAK 89 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHH
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHH
Confidence 55 6789999999999999999999876 8999998 67766654
No 137
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.54 E-value=0.00012 Score=53.12 Aligned_cols=50 Identities=16% Similarity=0.167 Sum_probs=40.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.++...+ .....+|+|||||+|.++..+++. .|+.+++.+|+ |..++.|+
T Consensus 96 ~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~ 147 (336)
T 2b25_A 96 MILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAK 147 (336)
T ss_dssp HHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 3555566 666789999999999999999998 58899999998 76666554
No 138
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.53 E-value=0.00011 Score=52.10 Aligned_cols=40 Identities=18% Similarity=0.267 Sum_probs=29.5
Q ss_pred CCceEEEecCCCcHHHH----HHHHHCCCCcE--EEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLN----MIISKYPSIKG--INFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~----~l~~~~P~l~~--~v~Dl-p~vi~~a 114 (118)
...+|+|||||+|.++. .++.++|+.++ +..|. +..++.|
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a 98 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKY 98 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHH
Confidence 34689999999997654 45667788864 89997 5666544
No 139
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.53 E-value=5.1e-05 Score=54.33 Aligned_cols=50 Identities=18% Similarity=0.274 Sum_probs=38.3
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC--CcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPS--IKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~--l~~~v~Dl-p~vi~~a~ 115 (118)
.+++..+ .....+|+|||||+|.++..++++.+. .+++.+|+ |..++.++
T Consensus 33 ~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~ 85 (279)
T 3uzu_A 33 AIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLE 85 (279)
T ss_dssp HHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHH
T ss_pred HHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHH
Confidence 3555555 666789999999999999999998765 55788887 66666543
No 140
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.53 E-value=0.00011 Score=48.19 Aligned_cols=47 Identities=19% Similarity=0.183 Sum_probs=37.3
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+++..+ .....+|+|+|||+|.++..+++.. .+++..|. |..++.++
T Consensus 25 ~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~ 72 (192)
T 1l3i_A 25 IMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTE 72 (192)
T ss_dssp HHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHH
T ss_pred HHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHH
Confidence 344455 5667899999999999999999988 78899998 66666543
No 141
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.53 E-value=5.7e-05 Score=50.87 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=36.7
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.+. .....+|+|||||+|.++..+++. ..+++..|+ |..++.++
T Consensus 43 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 91 (227)
T 3e8s_A 43 AILLAIL-GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAAR 91 (227)
T ss_dssp HHHHHHH-HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhh-cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHH
Confidence 3444444 344589999999999999999998 568899998 66666654
No 142
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.52 E-value=1.8e-05 Score=51.53 Aligned_cols=46 Identities=20% Similarity=0.155 Sum_probs=36.6
Q ss_pred HHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 67 LENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
++.++ .....+|+|||||+|.++..++++.. +++..|. |..++.++
T Consensus 10 ~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~ 56 (170)
T 3i9f_A 10 LPNIF-EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVK 56 (170)
T ss_dssp HHHHH-SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHH
T ss_pred HHhcC-cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHH
Confidence 34444 56678999999999999999999984 8899998 66666553
No 143
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.52 E-value=7.1e-05 Score=54.17 Aligned_cols=44 Identities=16% Similarity=0.249 Sum_probs=37.3
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
.....+|+|||||+|.++..++.+.|+.+++..|+ |+.++.|++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~ 164 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRK 164 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHH
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHH
Confidence 45678999999999988877777888999999998 888887764
No 144
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=97.51 E-value=6.7e-05 Score=52.53 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=39.3
Q ss_pred HHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 50 IFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 50 ~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.|..+....+......+... .....+|+|+|||+|.++..+++..+ +++..|. |..++.++
T Consensus 98 ~fgtg~~~tt~~~~~~l~~~---~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~ 159 (254)
T 2nxc_A 98 AFGTGHHETTRLALKALARH---LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAE 159 (254)
T ss_dssp ----CCSHHHHHHHHHHHHH---CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHh---cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHH
Confidence 35554444444333333322 23457999999999999999999876 8899998 76666554
No 145
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.51 E-value=5e-05 Score=53.57 Aligned_cols=47 Identities=21% Similarity=0.248 Sum_probs=35.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.+.+.++ .....+|+|||||+|.++..++++.+ +++..|+ |..++.|
T Consensus 48 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a 95 (293)
T 3thr_A 48 WLLGLLR-QHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYA 95 (293)
T ss_dssp HHHHHHH-HTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHH
T ss_pred HHHHHhc-ccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHH
Confidence 3444444 34567999999999999999999844 8899998 6666655
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.50 E-value=6.7e-05 Score=51.12 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=35.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
+..+|+|||||+|..+..++++.| +.+++.+|+ |..++.|+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 100 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQ 100 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHH
Confidence 468999999999999999999875 889999998 77777654
No 147
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.50 E-value=7e-05 Score=53.22 Aligned_cols=49 Identities=12% Similarity=0.162 Sum_probs=37.6
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+++.++ .. ..+|+|||||+|.++..++++ ..+++.+|+ |..++.++
T Consensus 72 ~~~~~~~~~-~~-~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 121 (299)
T 3g2m_A 72 AREFATRTG-PV-SGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFR 121 (299)
T ss_dssp HHHHHHHHC-CC-CSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHH
T ss_pred HHHHHHhhC-CC-CCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHH
Confidence 445555555 32 349999999999999999998 568899998 77777654
No 148
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.50 E-value=5.9e-05 Score=51.43 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=31.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++.+ +++..|+ |..++.|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~ 81 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQ 81 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHH
Confidence 456899999999999999999887 5777887 66665543
No 149
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=97.49 E-value=2.6e-05 Score=55.77 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=36.7
Q ss_pred CCCCceEEEecCCCcHHHHHHH-HHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMII-SKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~-~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..++ +.+|..+++.+|+ |..++.++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 160 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGAT 160 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHH
Confidence 4456889999999999999996 7789999999998 77776654
No 150
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.48 E-value=0.00012 Score=52.69 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=39.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a~ 115 (118)
.+++..+ .....+|+|||||.|.++..+++..+. .+++..|+ |..++.|+
T Consensus 66 ~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 117 (317)
T 1dl5_A 66 LFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK 117 (317)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence 4455555 666789999999999999999999884 78999997 66666554
No 151
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.46 E-value=9.9e-05 Score=50.85 Aligned_cols=42 Identities=24% Similarity=0.223 Sum_probs=35.9
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|..+..+++..| ..+++..|. |..++.|+
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 102 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVAR 102 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3467999999999999999999998 689999998 77766654
No 152
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.46 E-value=0.00022 Score=48.93 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=48.2
Q ss_pred cccCchHHHHHHHHHHhcch----hhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 41 HGKDPRYNKIFNNGMFSHST----ITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 41 ~~~~p~~~~~F~~~M~~~~~----~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+...|.........+...+. .....++...+ .....+|+|+|+|+|.++..++++ ..+++..|. |..++.|+
T Consensus 54 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~ 130 (248)
T 2yvl_A 54 EVYRPTLEEIILLGFERKTQIIYPKDSFYIALKLN-LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQ 130 (248)
T ss_dssp EEECCCHHHHHHHTSCCSSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHH
T ss_pred EEeCCCHHHHHHhcCcCCCCcccchhHHHHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHH
Confidence 34455554444444444322 12234555555 666789999999999999999999 778999997 66665543
No 153
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.46 E-value=7.2e-05 Score=50.00 Aligned_cols=41 Identities=12% Similarity=0.027 Sum_probs=33.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|.++..++++.+. +++..|. |..++.++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~ 82 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQ 82 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHH
Confidence 34578999999999999999999776 8899998 66666543
No 154
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.46 E-value=0.00018 Score=49.00 Aligned_cols=48 Identities=19% Similarity=0.302 Sum_probs=37.5
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++..+ .....+|+|||||+|.++..+++.. .+++..|. |..++.++
T Consensus 61 ~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~ 109 (231)
T 1vbf_A 61 FMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYAS 109 (231)
T ss_dssp HHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHH
T ss_pred HHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHH
Confidence 4455555 5667899999999999999999987 67888887 66666543
No 155
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.46 E-value=9.6e-05 Score=50.67 Aligned_cols=36 Identities=11% Similarity=0.159 Sum_probs=31.8
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeech
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDLP 108 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dlp 108 (118)
.....+|+|||||+|.++..+++++ |..+++.+|+-
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s 111 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFS 111 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECC
Confidence 4556799999999999999999997 78899999983
No 156
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.44 E-value=0.00012 Score=49.09 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=33.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++ .+..+++..|. |..++.|+
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~ 100 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAE 100 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHH
Confidence 457999999999999999776 57789999998 77776654
No 157
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.44 E-value=7.5e-05 Score=50.87 Aligned_cols=40 Identities=20% Similarity=0.382 Sum_probs=33.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+..+|+|||||+|.++..++++.+ +++..|+ |..++.++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~ 79 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHAR 79 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHH
Confidence 3467999999999999999999987 7888998 77776654
No 158
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.43 E-value=8.2e-05 Score=55.04 Aligned_cols=41 Identities=22% Similarity=0.254 Sum_probs=35.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++.+ |..+++..|+ |..++.|+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~ 125 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVAR 125 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHH
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHH
Confidence 45789999999999999999997 8899999998 77776654
No 159
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.43 E-value=0.00014 Score=54.07 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=39.6
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+++.++ .....+|+|||||+|.++..++++. .+++..|. +..++.|++
T Consensus 96 ~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~ 147 (416)
T 4e2x_A 96 ARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKARE 147 (416)
T ss_dssp HHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHT
T ss_pred HHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHH
Confidence 445666666 6677899999999999999999874 48899998 566666543
No 160
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.43 E-value=0.00045 Score=44.33 Aligned_cols=45 Identities=22% Similarity=0.231 Sum_probs=35.2
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeechH
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDLPH 109 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dlp~ 109 (118)
.+.+.+.......+|+|||||+|.++..+++.+ |+.+++..|+.+
T Consensus 12 ~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~ 57 (180)
T 1ej0_A 12 EIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP 57 (180)
T ss_dssp HHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc
Confidence 344445423456799999999999999999995 778999999754
No 161
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.42 E-value=6.5e-05 Score=52.35 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=34.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
+..+|+|||||+|..+..++++.| +.+++.+|+ |..++.|+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~ 102 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAH 102 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSH
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 467999999999999999999997 789999997 66665554
No 162
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.42 E-value=0.00027 Score=48.88 Aligned_cols=42 Identities=21% Similarity=0.143 Sum_probs=36.2
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
.+..+|+|||+|+|..+..++++.| +.+++..|. |..++.|+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 112 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGL 112 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 4568999999999999999999988 789999998 77776654
No 163
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.42 E-value=0.00011 Score=49.72 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=33.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++ ..+++..|+ |..++.++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 69 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAE 69 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 5679999999999999999998 668999998 66666553
No 164
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.41 E-value=0.00016 Score=47.43 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=29.3
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhh
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQ 112 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~ 112 (118)
..+|+|||||+|.++..++++. +++..|+ |..++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~ 58 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALE 58 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHH
T ss_pred CCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHh
Confidence 4699999999999999999988 8888998 55554
No 165
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.40 E-value=8.2e-05 Score=51.89 Aligned_cols=41 Identities=24% Similarity=0.415 Sum_probs=35.0
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
....+|+|||||+|.++..++++.|..+++..|. |..++.|
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a 125 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAA 125 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHH
Confidence 3467899999999999999999999999999998 5655554
No 166
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.40 E-value=8e-05 Score=51.17 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=32.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++..+. +++..|+ |..++.|+
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~~-~v~gvD~s~~~l~~a~ 100 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLR 100 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCEE-EEEEEECCHHHHHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHhcCCC-eEEEEcCCHHHHHHHH
Confidence 4578999999999999999665443 7899998 67776654
No 167
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.40 E-value=9.3e-05 Score=51.45 Aligned_cols=50 Identities=12% Similarity=0.276 Sum_probs=39.8
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
..+++..+ .....+|+|||||+|.++..++++. .+++..|+ |..++.+++
T Consensus 19 ~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~ 69 (245)
T 1yub_A 19 NQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSE 69 (245)
T ss_dssp HHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSC
T ss_pred HHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHH
Confidence 44556666 6667899999999999999999985 77899998 667776654
No 168
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.38 E-value=0.0001 Score=51.49 Aligned_cols=42 Identities=19% Similarity=0.127 Sum_probs=36.0
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
.+..+|+|||||+|..+..++++.| +.+++.+|. |..++.|+
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~ 121 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL 121 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3467999999999999999999998 789999998 67666554
No 169
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.38 E-value=0.00016 Score=51.54 Aligned_cols=48 Identities=19% Similarity=0.391 Sum_probs=37.3
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
..+++..+ .....+|+|||||+|.++..++++.. +++.+|+ |..++.+
T Consensus 18 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a 66 (285)
T 1zq9_A 18 NSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAEL 66 (285)
T ss_dssp HHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHH
T ss_pred HHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHH
Confidence 44556666 66678999999999999999999854 6788887 6666544
No 170
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.37 E-value=0.00019 Score=48.94 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=33.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+|||||+|.++..+++. ..+++..|. |..++.+++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~ 93 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKE 93 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHh
Confidence 4679999999999999999998 568899998 777766543
No 171
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.37 E-value=9.2e-05 Score=52.41 Aligned_cols=43 Identities=16% Similarity=0.006 Sum_probs=37.5
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+.+..+|+|+|||+|.++..++++.+..+++..|+ |..++.|+
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~ 160 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLC 160 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHH
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 45668999999999999999999999889999998 77777654
No 172
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.37 E-value=0.00027 Score=47.99 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=35.4
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHC-----CCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKY-----PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~-----P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..+++.. |..+++..|. |..++.|+
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~ 126 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSL 126 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHH
Confidence 4456799999999999999999987 6789999998 66666553
No 173
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.37 E-value=0.00018 Score=51.26 Aligned_cols=46 Identities=15% Similarity=0.135 Sum_probs=34.8
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
.+++..+ .... +|+|||||+|.++..++++. .+++.+|+ |..++.+
T Consensus 38 ~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l 84 (271)
T 3fut_A 38 RIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVL 84 (271)
T ss_dssp HHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHH
T ss_pred HHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHH
Confidence 4555555 5556 99999999999999999986 56777776 5555544
No 174
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.37 E-value=0.0001 Score=54.46 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=36.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
...+|+||| |+|.++..+++..|..+++.+|+ |.+++.|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~ 213 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEK 213 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHH
Confidence 357999999 99999999999999899999999 888887653
No 175
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.37 E-value=0.00015 Score=48.10 Aligned_cols=40 Identities=15% Similarity=0.018 Sum_probs=32.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..++++ +..+++.+|+ |..++.++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~ 84 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIA 84 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHH
Confidence 4578999999999999988774 6668999998 77777654
No 176
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.36 E-value=0.0002 Score=49.21 Aligned_cols=40 Identities=10% Similarity=0.029 Sum_probs=33.9
Q ss_pred CceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|..+..++++.| +.+++..|+ |..++.|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~ 98 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAK 98 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 34899999999999999999985 789999998 66666654
No 177
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=97.35 E-value=0.00013 Score=51.45 Aligned_cols=48 Identities=17% Similarity=0.137 Sum_probs=36.7
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+++.++ .....+|+|||||+|.++..+++. ..+++..|. |..++.++
T Consensus 111 ~~~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~ 159 (286)
T 3m70_A 111 DVVDAAK-IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLN 159 (286)
T ss_dssp HHHHHHH-HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHhh-ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHH
Confidence 3444444 345689999999999999999998 568999998 66666543
No 178
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.34 E-value=0.00023 Score=50.16 Aligned_cols=50 Identities=10% Similarity=0.076 Sum_probs=36.6
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
..+++..+ .....+|+|||||+|.++. + ++.++.+++..|+ |..++.+++
T Consensus 11 ~~iv~~~~-~~~~~~VLEIG~G~G~lt~-l-~~~~~~~v~avEid~~~~~~a~~ 61 (252)
T 1qyr_A 11 DSIVSAIN-PQKGQAMVEIGPGLAALTE-P-VGERLDQLTVIELDRDLAARLQT 61 (252)
T ss_dssp HHHHHHHC-CCTTCCEEEECCTTTTTHH-H-HHTTCSCEEEECCCHHHHHHHHT
T ss_pred HHHHHhcC-CCCcCEEEEECCCCcHHHH-h-hhCCCCeEEEEECCHHHHHHHHH
Confidence 34555555 6666789999999999999 5 4555545888898 777776544
No 179
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.34 E-value=0.00018 Score=49.12 Aligned_cols=38 Identities=21% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++. .+++..|. |..++.++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~ 71 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQ 71 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHH
Confidence 3479999999999999999887 78999998 77776654
No 180
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.34 E-value=0.00022 Score=50.99 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=32.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++ .+..+++..|+ |..++.++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~ 74 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQ 74 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHH
Confidence 567999999999999999988 46778999998 66666543
No 181
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.33 E-value=0.00036 Score=47.54 Aligned_cols=36 Identities=11% Similarity=0.150 Sum_probs=31.7
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.....+|+|||||+|.++..+++..+..+++..|+-
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s 90 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYS 90 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECC
Confidence 445679999999999999999999987789999984
No 182
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.32 E-value=0.00012 Score=48.76 Aligned_cols=38 Identities=18% Similarity=0.200 Sum_probs=31.9
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|.++..++++ ..+++..|. |..++.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~ 80 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELAR 80 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHH
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHH
Confidence 478999999999999999998 558899998 66666554
No 183
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.32 E-value=0.00012 Score=49.79 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=32.1
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHh
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVI 111 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi 111 (118)
.....+|+|+|||+|.++..++++. |..+++.+|. |..+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~ 111 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVL 111 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHH
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHH
Confidence 4456799999999999999999985 6788999997 4333
No 184
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.31 E-value=0.00013 Score=51.57 Aligned_cols=48 Identities=13% Similarity=0.233 Sum_probs=37.1
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
..+++..+ .....+|+|||||+|.++..++++. .+++.+|+ |..++.+
T Consensus 19 ~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~ 67 (255)
T 3tqs_A 19 QKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFL 67 (255)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHH
Confidence 34555566 6667899999999999999999985 57788887 6666554
No 185
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.31 E-value=0.00016 Score=49.85 Aligned_cols=41 Identities=27% Similarity=0.254 Sum_probs=35.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a~ 115 (118)
+..+|+|||||+|..+..+++..| +.+++.+|. |..++.|+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~ 114 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAK 114 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 457999999999999999999987 789999998 66666554
No 186
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.30 E-value=9.8e-05 Score=50.76 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=33.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++. ..+++..|. |..++.++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~ 119 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAK 119 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHH
Confidence 46799999999999999999887 568899998 77776654
No 187
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.30 E-value=0.00014 Score=48.55 Aligned_cols=41 Identities=29% Similarity=0.313 Sum_probs=33.9
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|+|||+|.++..+++. +..+++..|+ |..++.++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~ 91 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAK 91 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHH
Confidence 34579999999999999999987 5567999998 77777654
No 188
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.30 E-value=0.00031 Score=50.68 Aligned_cols=49 Identities=16% Similarity=0.183 Sum_probs=37.1
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
...+++..+ .....+|+|||||+|.++..++++ ..+++.+|+ |..++.+
T Consensus 39 ~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a 88 (295)
T 3gru_A 39 VNKAVESAN-LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYA 88 (295)
T ss_dssp HHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHH
T ss_pred HHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHH
Confidence 344566666 666789999999999999999998 457788887 5555544
No 189
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.30 E-value=0.00014 Score=49.64 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=32.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++ ..+++..|+ |..++.++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 87 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLAR 87 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 4578999999999999999998 568999998 77776654
No 190
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=97.28 E-value=0.00015 Score=48.77 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=33.5
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..++++. .+++..|. |..++.++
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~ 90 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRAC 90 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHH
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHH
Confidence 4567899999999999999999986 47888998 66666553
No 191
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.26 E-value=0.00022 Score=48.53 Aligned_cols=39 Identities=18% Similarity=0.251 Sum_probs=32.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++ ..+++..|. |..++.++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~ 76 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAE 76 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHH
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHH
Confidence 4579999999999999999998 457899998 67766553
No 192
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.25 E-value=0.00017 Score=48.58 Aligned_cols=39 Identities=18% Similarity=0.070 Sum_probs=31.6
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|+|||+|.++..++++.. .+++.+|+ |..++.|+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~ 93 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLK 93 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHH
T ss_pred CCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHH
Confidence 46899999999999999887754 57899998 67776654
No 193
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=97.24 E-value=0.00025 Score=51.81 Aligned_cols=48 Identities=25% Similarity=0.139 Sum_probs=36.2
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a 114 (118)
.+.+... ..+..+|+|||||+|.++..++++ +..+++..|..+.++.|
T Consensus 41 ~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a 88 (348)
T 2y1w_A 41 AILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHA 88 (348)
T ss_dssp HHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHH
T ss_pred HHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHH
Confidence 4455554 445679999999999999998886 66789999986555544
No 194
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.24 E-value=0.00025 Score=50.28 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=32.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec--hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL--PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl--p~vi~~a~ 115 (118)
....+|+|||||+|.++..+++. ...+++..|+ |..++.++
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~ 120 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLE 120 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHH
Confidence 34579999999999999988876 3448999999 67776654
No 195
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.24 E-value=0.00021 Score=48.60 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=35.3
Q ss_pred CCCCceEEEecCC-CcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGG-IGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg-~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+||||| +|.++..+++.. ..+++..|. |..++.|+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~ 96 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYAR 96 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHH
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHH
Confidence 3456899999999 999999999987 778999998 77776654
No 196
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.23 E-value=0.00014 Score=53.95 Aligned_cols=41 Identities=27% Similarity=0.293 Sum_probs=35.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
+..+|+|||||.|.++.++++..| .++++.|+ |.|++.|++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~ 229 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKK 229 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHH
Confidence 568999999999999999998765 78999998 888888764
No 197
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.22 E-value=0.00018 Score=52.64 Aligned_cols=40 Identities=25% Similarity=0.226 Sum_probs=33.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+..+|+|||||+|.++..++++ +..+++..|..+.++.|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~ 105 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAV 105 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHH
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHH
Confidence 4578999999999999999988 777899999876666554
No 198
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.22 E-value=0.00025 Score=47.49 Aligned_cols=41 Identities=17% Similarity=0.075 Sum_probs=32.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|+|||+|.++..+++..+ .+++..|. |..++.++
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~ 89 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLI 89 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHH
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHH
Confidence 3457899999999999999998843 37899998 77776554
No 199
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.21 E-value=0.00018 Score=49.17 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+|+|||||+|.++..+++ +..+++..|. |..++.++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~ 105 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKAN 105 (235)
T ss_dssp EEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHH
Confidence 5999999999999999976 6778999998 77776553
No 200
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.20 E-value=0.00021 Score=48.21 Aligned_cols=39 Identities=21% Similarity=0.140 Sum_probs=31.8
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|+|||+|.++..++++.. .+++.+|. |..++.|+
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~ 94 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLI 94 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHH
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHH
Confidence 47899999999999999888754 37899998 67776654
No 201
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.19 E-value=0.00025 Score=48.14 Aligned_cols=42 Identities=21% Similarity=0.216 Sum_probs=34.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|.++..+++.. |..+++..|. |..++.++
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~ 119 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSV 119 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence 456799999999999999999985 7789999998 66666543
No 202
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.19 E-value=0.00021 Score=48.97 Aligned_cols=39 Identities=26% Similarity=0.236 Sum_probs=32.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++.. .+++..|+ |..++.|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~ 117 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALAR 117 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHH
Confidence 46799999999999999999975 78899998 66666554
No 203
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.18 E-value=0.00054 Score=46.01 Aligned_cols=43 Identities=23% Similarity=0.340 Sum_probs=34.1
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.+.+.|..+....+|||+|||+|.++..++++ ..+++..|+-+
T Consensus 15 ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~ 57 (191)
T 3dou_A 15 FLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQE 57 (191)
T ss_dssp HHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSC
T ss_pred HHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccc
Confidence 45566663456789999999999999999988 67888888743
No 204
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.18 E-value=0.00024 Score=52.49 Aligned_cols=43 Identities=21% Similarity=0.009 Sum_probs=36.9
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+....+|+|+|||+|.+++.+++..+..+++.+|+ |.+++.|+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~ 258 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAE 258 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHH
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHH
Confidence 45668899999999999999999998778999998 77777654
No 205
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=97.18 E-value=0.00019 Score=50.36 Aligned_cols=38 Identities=8% Similarity=-0.007 Sum_probs=32.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
...+|+|||||+|..+..|++. ..+++..|+ |..++.|
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a 106 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREF 106 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHH
Confidence 4679999999999999999987 568999998 7777765
No 206
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.14 E-value=0.00023 Score=51.17 Aligned_cols=49 Identities=20% Similarity=0.344 Sum_probs=37.4
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+++..+ .....+|+|||||+|.++..++++ ..+++.+|+ |..++.++
T Consensus 32 ~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~ 81 (299)
T 2h1r_A 32 DKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVK 81 (299)
T ss_dssp HHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHH
T ss_pred HHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHH
Confidence 34555555 666789999999999999999987 457888887 66665543
No 207
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.14 E-value=0.00022 Score=50.60 Aligned_cols=40 Identities=25% Similarity=0.093 Sum_probs=34.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++..+. +++..|+ |..++.|+
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~ 165 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLV 165 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHH
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHH
Confidence 4679999999999999999999887 8999998 77776654
No 208
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.12 E-value=0.00021 Score=51.88 Aligned_cols=40 Identities=28% Similarity=0.292 Sum_probs=32.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+..+|+|||||+|.++..++++ +..+++..|..+.++.|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~ 77 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAK 77 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHH
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHH
Confidence 3578999999999999998886 556899999876666543
No 209
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.12 E-value=0.00028 Score=49.08 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=32.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..++++ ..+++..|. |..++.++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~ 93 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAR 93 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 4679999999999999999987 568899998 66666553
No 210
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=97.11 E-value=0.00072 Score=50.02 Aligned_cols=49 Identities=8% Similarity=0.064 Sum_probs=36.9
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a 114 (118)
.+++.++ .....+|+|+|||+|.++.++++++ +..+++.+|+ |..++.|
T Consensus 30 ~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 30 FMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp HHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred HHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 3444444 3345699999999999999999987 6788999997 5555443
No 211
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.10 E-value=0.00024 Score=47.33 Aligned_cols=36 Identities=14% Similarity=0.138 Sum_probs=30.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+|+|||||+|.++..+++. ..+++..|. |..++.++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~ 68 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAK 68 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHH
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHH
Confidence 9999999999999999987 568999998 66666543
No 212
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.08 E-value=0.00053 Score=49.12 Aligned_cols=42 Identities=24% Similarity=0.391 Sum_probs=32.9
Q ss_pred CCceEEEecCCC---cHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGI---GASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~---G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
+..+|||||||. |....-..+..|+.+++..|. |.+++.|++
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~ 123 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQG 123 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHH
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHH
Confidence 567999999997 334444445689999999999 999998864
No 213
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.07 E-value=0.0015 Score=45.31 Aligned_cols=47 Identities=17% Similarity=0.322 Sum_probs=34.0
Q ss_pred HHHHhcCCCC-CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhh
Q 043449 65 KFLENYKGFE-GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQD 113 (118)
Q Consensus 65 ~~~~~~~~~~-~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~ 113 (118)
.+++.++ .. ...+|+|||||+|.++..++++ ...+++..|+ |..++.
T Consensus 27 ~~L~~~~-~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~ 75 (232)
T 3opn_A 27 KALKEFH-LEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAW 75 (232)
T ss_dssp HHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCH
T ss_pred HHHHHcC-CCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHH
Confidence 3445555 33 3569999999999999999988 3348899997 444443
No 214
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.07 E-value=0.00038 Score=47.47 Aligned_cols=43 Identities=12% Similarity=0.223 Sum_probs=34.3
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCC------CCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYP------SIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P------~l~~~v~Dl-p~vi~~a~ 115 (118)
.....+|+|||||+|.++..+++..+ ..+++..|. |..++.++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~ 131 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSK 131 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHH
Confidence 44567999999999999999999765 368899997 66666543
No 215
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.05 E-value=0.00053 Score=49.52 Aligned_cols=66 Identities=11% Similarity=0.052 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhC
Q 043449 48 NKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDA 114 (118)
Q Consensus 48 ~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a 114 (118)
...|..+.-.........+....+ .....+|+|+|+|+|..+..+++..+ ..+++..|. |..++.+
T Consensus 92 ~~~~~~G~~~~qd~~s~l~~~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a 159 (315)
T 1ixk_A 92 TPEFLTGLIYIQEASSMYPPVALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRET 159 (315)
T ss_dssp SHHHHTTSEEECCHHHHHHHHHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHH
T ss_pred ChhHhcceEEEeCHHHHHHHHHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHH
Confidence 344555443332222222334455 56678999999999999999999975 578999997 5555544
No 216
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.01 E-value=0.00041 Score=48.67 Aligned_cols=41 Identities=27% Similarity=0.217 Sum_probs=32.8
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|.++..+++. +..+++..|+ |..++.++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~ 104 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDAR 104 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHH
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Confidence 35679999999999999998776 5668999998 66666543
No 217
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.00 E-value=0.00047 Score=48.68 Aligned_cols=46 Identities=4% Similarity=-0.039 Sum_probs=36.8
Q ss_pred HhcCCCCCCceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhhC
Q 043449 68 ENYKGFEGLKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQDA 114 (118)
Q Consensus 68 ~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a 114 (118)
...+ .....+|+|+|+|+|..+..+++..++ .+++..|. |..++.+
T Consensus 77 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~ 124 (274)
T 3ajd_A 77 IVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKAL 124 (274)
T ss_dssp HHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHH
T ss_pred HHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHH
Confidence 3444 556679999999999999999999887 78999998 5555543
No 218
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.98 E-value=0.00038 Score=48.64 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=38.7
Q ss_pred HHHHhcCC--CCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKG--FEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~--~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a 114 (118)
.++..++. .....+|+|+|||+|.++..+++.- |+=+++.+|. |..++.+
T Consensus 65 ~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l 118 (233)
T 4df3_A 65 ALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDL 118 (233)
T ss_dssp HHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHH
T ss_pred HHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 34444432 5677899999999999999999985 8889999997 6666543
No 219
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=96.95 E-value=0.00055 Score=53.22 Aligned_cols=39 Identities=21% Similarity=0.161 Sum_probs=32.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+.-+|+|||||.|.++..+++. ..++|..|+ |..|+.|+
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~ 105 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCR 105 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHH
Confidence 3468999999999999999997 678999998 66676654
No 220
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=96.94 E-value=0.00072 Score=49.97 Aligned_cols=41 Identities=22% Similarity=0.127 Sum_probs=32.8
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDA 114 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a 114 (118)
.....+|+|||||+|.++..++++. ..+++..|....++.|
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a 101 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHA 101 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHH
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHH
Confidence 4556899999999999999999883 3488999987655544
No 221
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.94 E-value=0.00045 Score=49.90 Aligned_cols=43 Identities=21% Similarity=0.197 Sum_probs=37.3
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
.+.++|+=||||.|..+.++++..|--++++.|+ |.|++.+++
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~ 125 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQ 125 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHH
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHh
Confidence 3568899999999999999998877788999998 889887754
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.87 E-value=0.0013 Score=46.76 Aligned_cols=36 Identities=22% Similarity=0.087 Sum_probs=29.8
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHh
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVI 111 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi 111 (118)
+....+|+|||||+|.++..++++ -+++..|+-+.+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~ 115 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLG 115 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhh
Confidence 455689999999999999999988 578889985543
No 223
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=96.86 E-value=0.00048 Score=56.27 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=35.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|||||+|.++..+++.. |..+++.+|+ |..++.|+
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AR 763 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAA 763 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHH
Confidence 46799999999999999999998 5678999998 77777664
No 224
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.82 E-value=0.00054 Score=45.67 Aligned_cols=41 Identities=20% Similarity=0.197 Sum_probs=30.6
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|||||+|..+..++.. +..+++..|. |..++.++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~ 63 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAE 63 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHH
Confidence 34579999999999986555544 5678999998 66666543
No 225
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.80 E-value=0.0016 Score=46.01 Aligned_cols=35 Identities=23% Similarity=0.179 Sum_probs=29.3
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHH
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHV 110 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~v 110 (118)
+....+|||||||+|.++..++++ .+++..|+-+.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m 106 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTL 106 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchh
Confidence 455689999999999999999887 67888898554
No 226
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=96.78 E-value=0.001 Score=46.94 Aligned_cols=40 Identities=13% Similarity=0.013 Sum_probs=33.2
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+....+|+|||||.|-++..+. |..+.+.+|+ +..++.++
T Consensus 103 ~~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar 143 (253)
T 3frh_A 103 AETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVIT 143 (253)
T ss_dssp SCCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHH
T ss_pred CCCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHH
Confidence 4457899999999999999988 9999999998 66665543
No 227
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=96.74 E-value=0.0017 Score=48.29 Aligned_cols=34 Identities=15% Similarity=0.002 Sum_probs=27.1
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKY 97 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~ 97 (118)
+..++.... |.....|+|.+||+|+++++.+..-
T Consensus 184 Aa~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~ 217 (385)
T 3ldu_A 184 AAGLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIG 217 (385)
T ss_dssp HHHHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHH
T ss_pred HHHHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHH
Confidence 344555566 8878899999999999999988763
No 228
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.73 E-value=0.00065 Score=48.84 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=30.4
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|||||+|..+..+++. ...+++..|+ +..++.|+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~ 88 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGN 88 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHH
T ss_pred CCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHH
Confidence 578999999999877766654 3457899998 77777665
No 229
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=96.73 E-value=0.0029 Score=42.39 Aligned_cols=37 Identities=22% Similarity=0.107 Sum_probs=26.3
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
+++.+.......+|+|||||+|.++..+. .+++..|.
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~ 94 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR-----NPVHCFDL 94 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC-----SCEEEEES
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeC
Confidence 44433313456789999999999998873 56777775
No 230
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=96.72 E-value=0.0018 Score=48.28 Aligned_cols=36 Identities=8% Similarity=-0.119 Sum_probs=28.2
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPS 99 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~ 99 (118)
+..++.... |.....|+|.+||+|+++++.+....+
T Consensus 190 Aa~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~ 225 (393)
T 3k0b_A 190 AAALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQN 225 (393)
T ss_dssp HHHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTT
T ss_pred HHHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcC
Confidence 344556566 888889999999999999998876544
No 231
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=96.69 E-value=0.0039 Score=44.87 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=34.3
Q ss_pred HHHHhcCCCC-CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhh
Q 043449 65 KFLENYKGFE-GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQ 112 (118)
Q Consensus 65 ~~~~~~~~~~-~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~ 112 (118)
.+++.+. .. ...+|+|||||+|.++..+++. +.-+++..|. |..++
T Consensus 75 ~~l~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~ 122 (291)
T 3hp7_A 75 KALAVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLV 122 (291)
T ss_dssp HHHHHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSC
T ss_pred HHHHhcC-CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHH
Confidence 4556665 44 4569999999999999988886 5568888997 44443
No 232
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=96.66 E-value=0.00028 Score=49.81 Aligned_cols=39 Identities=13% Similarity=0.089 Sum_probs=28.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
...+|+|||||+|.. ..++...+..+++..|+ |..++.|
T Consensus 71 ~~~~vLDiGcG~G~~-~~l~~~~~~~~v~gvD~s~~~l~~a 110 (289)
T 2g72_A 71 SGRTLIDIGSGPTVY-QLLSACSHFEDITMTDFLEVNRQEL 110 (289)
T ss_dssp CCSEEEEETCTTCCG-GGTTGGGGCSEEEEECSCHHHHHHH
T ss_pred CCCeEEEECCCcChH-HHHhhccCCCeEEEeCCCHHHHHHH
Confidence 457899999999994 44444445668999998 6666654
No 233
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.65 E-value=0.0012 Score=49.59 Aligned_cols=47 Identities=15% Similarity=0.204 Sum_probs=36.5
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
+++..+ .....+|+|+|||+|.++..+++. ..+++..|. |..++.|+
T Consensus 278 ~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~ 325 (433)
T 1uwv_A 278 ALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQ 325 (433)
T ss_dssp HHHHHT-CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHH
T ss_pred HHHhhc-CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHH
Confidence 344444 455679999999999999999988 568899998 67776654
No 234
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=96.62 E-value=0.0013 Score=46.38 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=31.0
Q ss_pred HHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 67 LENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.+... .....+|+|+|||+|.++..+++. ..+++.+|+-+
T Consensus 76 ~~a~~-~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~ 115 (258)
T 2r6z_A 76 AKAVN-HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHP 115 (258)
T ss_dssp HHHTT-GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCH
T ss_pred HHHhC-cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECCh
Confidence 33334 444578999999999999999986 56899999833
No 235
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=96.59 E-value=0.00084 Score=47.84 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=32.7
Q ss_pred CceEEEecCCCcH----HHHHHHHHCC----CCcEEEeec-hHHhhhCCC
Q 043449 76 LKSVVDVGGGIGA----SLNMIISKYP----SIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 76 ~~~vvDvGGg~G~----~~~~l~~~~P----~l~~~v~Dl-p~vi~~a~~ 116 (118)
..+|+|+|||+|. +++.+++..| +.+++..|+ +.+++.|++
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~ 155 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARS 155 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHh
Confidence 4689999999998 6666777756 468899998 888887753
No 236
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=96.56 E-value=0.00022 Score=49.22 Aligned_cols=40 Identities=13% Similarity=0.023 Sum_probs=32.7
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
....+|+|||||+|.++..+++..+ .+++..|. |..++.+
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a 95 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWEL 95 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHH
Confidence 3457899999999999999988876 57899998 6666655
No 237
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.54 E-value=0.0014 Score=47.73 Aligned_cols=39 Identities=15% Similarity=0.021 Sum_probs=32.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++... +++..|+ |..++.|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~ 192 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAK 192 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHH
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHH
Confidence 346899999999999999999754 8999998 77776654
No 238
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.52 E-value=0.0012 Score=49.09 Aligned_cols=39 Identities=15% Similarity=0.165 Sum_probs=32.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++. ..+++..|. |..++.++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~ 272 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQ 272 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHH
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 3568999999999999999998 568899997 66666554
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=96.50 E-value=0.00023 Score=50.91 Aligned_cols=41 Identities=10% Similarity=0.054 Sum_probs=35.4
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
....+|+|||||.|-++..+...+|..+.+.+|. +..++.+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a 172 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFV 172 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHH
Confidence 3478999999999999999999999999999998 5555544
No 240
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.50 E-value=0.0012 Score=44.04 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=28.1
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCC-cEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSI-KGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l-~~~v~Dl-p~vi~~a 114 (118)
...+|+|||||+|.++..+ .. +++..|. |..++.+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a 72 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVG 72 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHH
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHH
Confidence 5679999999999999887 44 7889997 5666554
No 241
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=96.49 E-value=0.0032 Score=46.85 Aligned_cols=36 Identities=14% Similarity=-0.102 Sum_probs=28.2
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPS 99 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~ 99 (118)
+..++.... |.....|+|.+||+|+++++.+....+
T Consensus 183 Aaall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~ 218 (384)
T 3ldg_A 183 AAAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMN 218 (384)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTT
T ss_pred HHHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcC
Confidence 344555566 888889999999999999998876544
No 242
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=96.47 E-value=0.0026 Score=48.07 Aligned_cols=46 Identities=15% Similarity=0.086 Sum_probs=36.6
Q ss_pred HHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhh
Q 043449 67 LENYKGFEGLKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQD 113 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~ 113 (118)
....+ .....+|+|+|+|+|..+..+++..++ .+++..|. |..++.
T Consensus 252 ~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~ 299 (450)
T 2yxl_A 252 SIVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKR 299 (450)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHH
T ss_pred HHhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHH
Confidence 34445 555679999999999999999999987 78999997 444443
No 243
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.44 E-value=0.0032 Score=45.22 Aligned_cols=50 Identities=18% Similarity=0.155 Sum_probs=41.4
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+++.+. ......+||.++|.|..+.+|+++ +.+++.+|. |..++.|+
T Consensus 11 l~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~ 61 (285)
T 1wg8_A 11 YQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAK 61 (285)
T ss_dssp HHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred HHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHH
Confidence 455667776 667789999999999999999998 779999998 77776653
No 244
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.39 E-value=0.0015 Score=49.02 Aligned_cols=45 Identities=11% Similarity=0.178 Sum_probs=36.0
Q ss_pred HhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhh
Q 043449 68 ENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQD 113 (118)
Q Consensus 68 ~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~ 113 (118)
...+ .....+|+|+|+|+|..+..+++..|+.+++..|. |..++.
T Consensus 240 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~ 285 (429)
T 1sqg_A 240 TWLA-PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSR 285 (429)
T ss_dssp HHHC-CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHH
T ss_pred HHcC-CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 3344 45567999999999999999999999888999997 444443
No 245
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=96.35 E-value=0.0018 Score=43.77 Aligned_cols=33 Identities=21% Similarity=0.171 Sum_probs=26.1
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
..+|+|||||+|.++..++++ +..|. |..++.+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a 81 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIA 81 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHH
Confidence 678999999999999988765 77776 5555544
No 246
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.33 E-value=0.002 Score=47.96 Aligned_cols=39 Identities=23% Similarity=0.222 Sum_probs=28.9
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
.++|+|||||+|.++...+++- .-+++..|..++++.|+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~ 122 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAR 122 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHH
T ss_pred CCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHH
Confidence 4789999999999987766653 34788888765555543
No 247
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.30 E-value=0.002 Score=47.82 Aligned_cols=40 Identities=15% Similarity=-0.012 Sum_probs=34.8
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|+|+|+|..++.++++.|..+++..|+ |..++.++
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~ 88 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMK 88 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 47899999999999999999999889999998 66666554
No 248
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.25 E-value=0.0022 Score=47.81 Aligned_cols=41 Identities=24% Similarity=0.264 Sum_probs=34.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAPA 116 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~~ 116 (118)
..++|+=||||.|..+.++++ ||.-++++.|+ |.|++.+++
T Consensus 205 ~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~ 246 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKK 246 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHh
Confidence 357899999999999999997 45578999998 889988765
No 249
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.11 E-value=0.0078 Score=42.51 Aligned_cols=43 Identities=16% Similarity=0.191 Sum_probs=33.8
Q ss_pred HHHHHhcCCCCCC--ceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 64 KKFLENYKGFEGL--KSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 64 ~~~~~~~~~~~~~--~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
..+.+... .... .+|+|++||.|..+..++++ ..+++.+|.-+
T Consensus 76 e~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~ 120 (258)
T 2oyr_A 76 EAVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNP 120 (258)
T ss_dssp SHHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCH
T ss_pred HHHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCH
Confidence 34555555 5555 79999999999999999998 55899999844
No 250
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.08 E-value=0.011 Score=41.01 Aligned_cols=43 Identities=14% Similarity=0.194 Sum_probs=33.9
Q ss_pred HHHHhcCC--CCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeec
Q 043449 65 KFLENYKG--FEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDL 107 (118)
Q Consensus 65 ~~~~~~~~--~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl 107 (118)
.++..++. .....+|+|+|||+|.++..+++. -|+-+++.+|+
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~ 109 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEF 109 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEEC
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEEC
Confidence 44444432 456789999999999999999987 46888999998
No 251
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.07 E-value=0.0021 Score=46.66 Aligned_cols=41 Identities=20% Similarity=0.217 Sum_probs=33.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCC-----CcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPS-----IKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~-----l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++..+. .+++.+|+ |..++.|+
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~ 176 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLAL 176 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHH
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHH
Confidence 4579999999999999999998875 67899998 66665543
No 252
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.97 E-value=0.0054 Score=44.18 Aligned_cols=32 Identities=19% Similarity=-0.002 Sum_probs=26.8
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
+....+|||||||+|.++..++++ -+++..|.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~ 111 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKG 111 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEec
Confidence 445679999999999999999988 36777787
No 253
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=95.92 E-value=0.0056 Score=46.74 Aligned_cols=47 Identities=6% Similarity=-0.018 Sum_probs=36.8
Q ss_pred HHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhhC
Q 043449 67 LENYKGFEGLKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQDA 114 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a 114 (118)
....+ .....+|+|+|+|+|..+..+++..++ .+++..|+ |..++.+
T Consensus 94 a~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a 142 (464)
T 3m6w_A 94 GVLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGL 142 (464)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHH
T ss_pred HHhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 34444 556689999999999999999999876 68899997 5555544
No 254
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.88 E-value=0.0049 Score=45.97 Aligned_cols=38 Identities=16% Similarity=0.005 Sum_probs=31.4
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|+|||+|.++..+++... +++..|+ |..++.|+
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~ 253 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLD 253 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHH
T ss_pred CCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHH
Confidence 67999999999999999999744 4899998 66666554
No 255
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=95.82 E-value=0.00084 Score=46.91 Aligned_cols=39 Identities=10% Similarity=0.017 Sum_probs=27.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
+..+|+|||||+|.++..+++..- -+++..|+ |..++.|
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a 94 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREEL 94 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHH
Confidence 457899999999987765554421 25888997 6666654
No 256
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=95.79 E-value=0.004 Score=44.46 Aligned_cols=41 Identities=24% Similarity=0.110 Sum_probs=33.3
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|+|+|+|.+++.++++ ...+++..|+ |..++.++
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~ 165 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLV 165 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHH
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHH
Confidence 35689999999999999999887 4568999998 77666543
No 257
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=95.79 E-value=0.0058 Score=45.24 Aligned_cols=40 Identities=23% Similarity=0.080 Sum_probs=32.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++. +..+++..|. |..++.|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~ 257 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAK 257 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHH
Confidence 5679999999999999999987 4457899998 66666554
No 258
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.78 E-value=0.0071 Score=45.54 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=31.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++. ..+++..|. |..++.|+
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~ 329 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMAR 329 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHH
Confidence 4578999999999999999987 447888887 66776654
No 259
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=95.71 E-value=0.0066 Score=45.69 Aligned_cols=38 Identities=29% Similarity=0.436 Sum_probs=31.3
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|+|||+|..+..+++. ..+++..|. |..++.|+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar 132 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAAR 132 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHH
Confidence 578999999999999999887 458888897 66666654
No 260
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.71 E-value=0.0065 Score=45.01 Aligned_cols=40 Identities=13% Similarity=-0.015 Sum_probs=32.6
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++.. ..+++..|. |..++.|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~ 260 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIAR 260 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHH
Confidence 45789999999999999999874 457899998 66666554
No 261
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=95.68 E-value=0.0051 Score=44.71 Aligned_cols=38 Identities=26% Similarity=0.226 Sum_probs=31.7
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++.. ++ ...+++..|+ |..++.++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~ 233 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLK 233 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHH
Confidence 457899999999999999 76 5778999998 77776654
No 262
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=95.68 E-value=0.0047 Score=45.59 Aligned_cols=39 Identities=13% Similarity=-0.010 Sum_probs=32.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++. ..+++..|. |..++.|+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~ 248 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAE 248 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHH
Confidence 5678999999999999999998 567899998 77776654
No 263
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=95.60 E-value=0.0065 Score=45.02 Aligned_cols=41 Identities=12% Similarity=-0.078 Sum_probs=32.3
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
....+|+|+|||+|.++..+++.. .-+++..|+ |..++.|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~ 252 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSL 252 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHH
Confidence 345789999999999999999863 237888997 66776654
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.56 E-value=0.015 Score=46.50 Aligned_cols=33 Identities=12% Similarity=0.017 Sum_probs=26.2
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHH
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISK 96 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~ 96 (118)
+..++.... |.....|+|.+||+|+++++.+..
T Consensus 179 Aa~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~ 211 (703)
T 3v97_A 179 AAAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAML 211 (703)
T ss_dssp HHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHH
T ss_pred HHHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHH
Confidence 344555556 877889999999999999987764
No 265
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=95.39 E-value=0.01 Score=44.66 Aligned_cols=49 Identities=18% Similarity=0.085 Sum_probs=35.7
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-------------CCCcEEEeec-hHHhhhC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-------------PSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-------------P~l~~~v~Dl-p~vi~~a 114 (118)
.+++..+ .....+|+|.|||+|.++..+.+.. +..+++.+|+ |..++.|
T Consensus 162 ~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA 224 (445)
T 2okc_A 162 AMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLA 224 (445)
T ss_dssp HHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHH
T ss_pred HHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHH
Confidence 3444444 3445689999999999999988763 4567889997 6666544
No 266
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.28 E-value=0.014 Score=43.42 Aligned_cols=34 Identities=29% Similarity=0.441 Sum_probs=28.0
Q ss_pred CceEEEecCCCcHHHHHH--------HHHC-------CCCcEEEeechH
Q 043449 76 LKSVVDVGGGIGASLNMI--------ISKY-------PSIKGINFDLPH 109 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l--------~~~~-------P~l~~~v~Dlp~ 109 (118)
.-+|+|+|||+|..+..+ .+++ |.++++.-|||.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ 101 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPS 101 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTT
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCc
Confidence 578999999999887776 4444 888999999986
No 267
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=95.23 E-value=0.02 Score=42.02 Aligned_cols=37 Identities=8% Similarity=0.130 Sum_probs=29.6
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
.+|+|+|||+|.++..+++.. -+++..|. |..++.|+
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~ 252 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQ 252 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHH
T ss_pred CEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHH
Confidence 679999999999999988754 46788887 66666554
No 268
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.21 E-value=0.029 Score=40.97 Aligned_cols=39 Identities=15% Similarity=0.322 Sum_probs=36.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHhhh
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVIQD 113 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~ 113 (118)
+...||.+|+|..+....+...+|+++.+-.|+|+|++.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~ 135 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVEL 135 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHH
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHH
Confidence 468999999999999999999999999999999999875
No 269
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=95.15 E-value=0.011 Score=45.08 Aligned_cols=47 Identities=9% Similarity=0.007 Sum_probs=35.8
Q ss_pred HHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhhC
Q 043449 67 LENYKGFEGLKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQDA 114 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a 114 (118)
....+ .....+|+|+|+|+|..+..+++..++ .+++..|+ |..++.+
T Consensus 98 ~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~ 146 (456)
T 3m4x_A 98 GTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKIL 146 (456)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHH
T ss_pred HHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHH
Confidence 34444 555689999999999999999998764 68899997 5555443
No 270
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=94.98 E-value=0.021 Score=43.10 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=26.5
Q ss_pred CceEEEecCC------CcHHHHHHHHH-CCCCcEEEeec
Q 043449 76 LKSVVDVGGG------IGASLNMIISK-YPSIKGINFDL 107 (118)
Q Consensus 76 ~~~vvDvGGg------~G~~~~~l~~~-~P~l~~~v~Dl 107 (118)
..+|+||||| +|..+..++++ +|+.+++..|+
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDi 255 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDI 255 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEEC
Confidence 4689999999 66667777765 59999999998
No 271
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=94.83 E-value=0.022 Score=42.54 Aligned_cols=33 Identities=24% Similarity=0.185 Sum_probs=28.3
Q ss_pred CceEEEecCCCcHHHHHHHHH-----------------CCCCcEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISK-----------------YPSIKGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~-----------------~P~l~~~v~Dlp 108 (118)
.-+|+|+||++|..+..+... .|.++++.-|||
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 678999999999988877776 578889999999
No 272
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=94.81 E-value=0.024 Score=40.91 Aligned_cols=45 Identities=16% Similarity=0.089 Sum_probs=34.9
Q ss_pred hcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhC
Q 043449 69 NYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 69 ~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a 114 (118)
..+ .....+|+|+|+|+|..+..+++.. +.-+++..|+ |..++.+
T Consensus 97 ~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~ 143 (309)
T 2b9e_A 97 LLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASM 143 (309)
T ss_dssp HHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred HhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHH
Confidence 344 4556799999999999999999884 5678999997 5555443
No 273
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=94.70 E-value=0.032 Score=42.63 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=32.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dl-p~vi~~a 114 (118)
...+|+|+|+|+|..+..+++..+ ..+++..|+ +..++.+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~ 158 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVL 158 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence 567999999999999999999975 478999997 5555443
No 274
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.67 E-value=0.069 Score=39.32 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=43.1
Q ss_pred HHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHC-CCCcEEEeec-hHHhhhCC
Q 043449 63 MKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKY-PSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 63 ~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+++.+. ......+||...|.|..+.+|+++. |+.+++.+|. |..++.|+
T Consensus 46 l~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 46 LDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp THHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred HHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 345666666 6667899999999999999999985 8899999998 77777664
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=94.05 E-value=0.038 Score=44.12 Aligned_cols=40 Identities=10% Similarity=-0.085 Sum_probs=31.5
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
...+|+|+|||+|.++..+++... -+++..|+ |..++.|+
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~ 579 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAE 579 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHH
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHH
Confidence 357899999999999999988533 35899998 66666554
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=94.03 E-value=0.079 Score=42.62 Aligned_cols=49 Identities=12% Similarity=0.139 Sum_probs=31.9
Q ss_pred cccccccCchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHHH
Q 043449 37 TYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLNM 92 (118)
Q Consensus 37 ~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~ 92 (118)
.||-+++|+-+-+.|.+|+... +.+.+++-.+...|+|||+|+|-++..
T Consensus 378 tYe~fekD~vRy~~Y~~AI~~a-------l~d~~~~~~~~~VVldVGaGtGpLs~~ 426 (745)
T 3ua3_A 378 VYNTFEQDQIKYDVYGEAVVGA-------LKDLGADGRKTVVIYLLGGGRGPIGTK 426 (745)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHH-------HHHHHTTCCSEEEEEEESCTTCHHHHH
T ss_pred HHHHHcCChhhHHHHHHHHHHH-------HHHhhcccCCCcEEEEECCCCCHHHHH
Confidence 4667777887777777776442 222222112357899999999999754
No 277
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=93.93 E-value=0.074 Score=38.08 Aligned_cols=42 Identities=26% Similarity=0.132 Sum_probs=31.1
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.+.+.|- +....+|||+|||.|.++.-.++..+-.+++-+|+
T Consensus 81 ei~eK~~-Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~Gvdv 122 (282)
T 3gcz_A 81 WMEERGY-VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTL 122 (282)
T ss_dssp HHHHTTS-CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred HHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEe
Confidence 4555554 66677999999999999998887776555554554
No 278
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=93.89 E-value=0.06 Score=42.67 Aligned_cols=67 Identities=19% Similarity=0.275 Sum_probs=39.7
Q ss_pred cccccccCchHHHHHHHHHHhcchhhHHHHHHhcCC---CCCCceEEEecCCCcHHHHHHHHHC----CCCcEEEeechH
Q 043449 37 TYEYHGKDPRYNKIFNNGMFSHSTITMKKFLENYKG---FEGLKSVVDVGGGIGASLNMIISKY----PSIKGINFDLPH 109 (118)
Q Consensus 37 ~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~~~~~---~~~~~~vvDvGGg~G~~~~~l~~~~----P~l~~~v~Dlp~ 109 (118)
.||.+++||-.-..|.+|+.. ++.+.... -.+..+|+|||+|+|-++...+++- -++++...+--+
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~-------Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp 395 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYK-------CLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP 395 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH-------HHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH
T ss_pred hhhhhcCChhhHHHHHHHHHH-------HHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH
Confidence 477788898777778777643 22221110 2235689999999999844444332 233555555433
Q ss_pred H
Q 043449 110 V 110 (118)
Q Consensus 110 v 110 (118)
.
T Consensus 396 ~ 396 (637)
T 4gqb_A 396 N 396 (637)
T ss_dssp H
T ss_pred H
Confidence 3
No 279
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.88 E-value=0.039 Score=39.29 Aligned_cols=38 Identities=24% Similarity=0.171 Sum_probs=30.2
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
...+|+|++||+|+.+.+.++.. .+++.+|+ |..++.|
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a 273 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLA 273 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHH
Confidence 35689999999999999988864 57899998 5555544
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=93.22 E-value=0.11 Score=37.04 Aligned_cols=36 Identities=19% Similarity=0.089 Sum_probs=26.0
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcE
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKG 102 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~ 102 (118)
+.+..- +....+|||+|||.|.++.-+++..+--++
T Consensus 66 i~ek~~-l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v 101 (277)
T 3evf_A 66 FHERGY-VKLEGRVIDLGCGRGGWCYYAAAQKEVSGV 101 (277)
T ss_dssp HHHTTS-SCCCEEEEEETCTTCHHHHHHHTSTTEEEE
T ss_pred HHHhCC-CCCCCEEEEecCCCCHHHHHHHHhcCCCcc
Confidence 334433 556678999999999999988777654343
No 281
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.95 E-value=0.83 Score=30.12 Aligned_cols=58 Identities=16% Similarity=0.206 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 47 YNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 47 ~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
+...|.+-|+...... ...++...+. ..-|+|+|=|.|..=-.+.+.+|+-++.|||+
T Consensus 15 RLDsfirRltaQR~~L-~~a~~~v~~~--~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 15 RLDLFIDRMVSQRACL-EHAIAQTAGL--SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHTTTC--CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHhcCC--CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 3456777776654432 2233333323 35699999999999999999999999999996
No 282
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=92.91 E-value=0.051 Score=40.58 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=33.0
Q ss_pred CceEEEecCCCcHHHHHHHHHCCC-CcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPS-IKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+|+++|+|.+++.++++.+. -+++..|. |..++.++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~ 94 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK 94 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 478999999999999999998766 46888998 76666554
No 283
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.46 E-value=0.21 Score=37.19 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCCceEEEecCCCcHHHHHHH-HHCCC-CcEEEeec-hHHhh
Q 043449 74 EGLKSVVDVGGGIGASLNMII-SKYPS-IKGINFDL-PHVIQ 112 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~-~~~P~-l~~~v~Dl-p~vi~ 112 (118)
.+..+++|||++.|.++..++ +..+. .+++.|+- |...+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~ 266 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQ 266 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHH
Confidence 456899999999999999988 67776 78999985 55443
No 284
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=92.24 E-value=0.053 Score=40.06 Aligned_cols=36 Identities=19% Similarity=0.226 Sum_probs=26.4
Q ss_pred CCCceEEEecCCCcHHHHH--------HHHH--------CCCCcEEEeechH
Q 043449 74 EGLKSVVDVGGGIGASLNM--------IISK--------YPSIKGINFDLPH 109 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~--------l~~~--------~P~l~~~v~Dlp~ 109 (118)
++.-+|+|+||++|..+.. +.++ .|.++++.-|||.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~ 101 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPG 101 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTT
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCc
Confidence 3457899999999965543 3332 5778889999985
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=92.05 E-value=0.13 Score=42.06 Aligned_cols=42 Identities=12% Similarity=0.132 Sum_probs=33.1
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCC---CcEEEeec-hHHhhhC
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPS---IKGINFDL-PHVIQDA 114 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~---l~~~v~Dl-p~vi~~a 114 (118)
+....+|+|.|||+|.++.+++++.+. .+++.+|+ |..++.|
T Consensus 319 l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LA 364 (878)
T 3s1s_A 319 LTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELL 364 (878)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHH
T ss_pred CCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHH
Confidence 334679999999999999999998873 46888887 5555544
No 286
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=92.01 E-value=0.08 Score=41.00 Aligned_cols=48 Identities=19% Similarity=0.057 Sum_probs=32.9
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHHCC------------------CCcEEEeec-hHHhhhC
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISKYP------------------SIKGINFDL-PHVIQDA 114 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P------------------~l~~~v~Dl-p~vi~~a 114 (118)
+++..+ -....+|+|.+||+|.++..+.+... ..+++.+|+ |..++.|
T Consensus 161 mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 161 IIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 344444 34456899999999999998876532 236788887 5555543
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.74 E-value=0.17 Score=32.97 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=24.4
Q ss_pred CCceEEEecCCCcH-HHHHHHHHCCCCcEEEeec
Q 043449 75 GLKSVVDVGGGIGA-SLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 75 ~~~~vvDvGGg~G~-~~~~l~~~~P~l~~~v~Dl 107 (118)
...++|+||+|.|. .+..|++. -+..++..|+
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDI 67 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDI 67 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECS
T ss_pred CCCcEEEEccCCChHHHHHHHHh-CCCeEEEEEC
Confidence 34799999999995 77776653 4677788885
No 288
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.91 E-value=0.33 Score=35.73 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=25.0
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
...||+||.|.|.++..|+++...-+.++++.
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~ 90 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEK 90 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEec
Confidence 47899999999999999998744345555554
No 289
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.66 E-value=0.57 Score=34.94 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=27.4
Q ss_pred CCCceEEEecCCCcHHHHHHHHHC-------CCCcEEEeechHH
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKY-------PSIKGINFDLPHV 110 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~-------P~l~~~v~Dlp~v 110 (118)
+..-.||++|+|.|.++..+++.. ..++.++.|.-+.
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~ 122 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPV 122 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHH
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHH
Confidence 344579999999999999988752 3456777776443
No 290
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=90.27 E-value=0.23 Score=35.78 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=27.7
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
+....+|||+|++.|.++.-++++.+-..++.+|+
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdl 113 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTL 113 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEe
Confidence 55678999999999999999998765545555555
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=90.23 E-value=0.41 Score=33.77 Aligned_cols=43 Identities=16% Similarity=0.075 Sum_probs=32.6
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.+.+.+- +....+|||+|+++|.++.-.+....--+++.+|+-
T Consensus 69 ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG 111 (267)
T 3p8z_A 69 WFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKG 111 (267)
T ss_dssp HHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCC
T ss_pred HHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecC
Confidence 4555554 666679999999999999977766655578888863
No 292
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=90.06 E-value=0.35 Score=34.58 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=25.3
Q ss_pred CCCCceEEEecC------CCcHHHHHHHHHCC-CCcEEEeech
Q 043449 73 FEGLKSVVDVGG------GIGASLNMIISKYP-SIKGINFDLP 108 (118)
Q Consensus 73 ~~~~~~vvDvGG------g~G~~~~~l~~~~P-~l~~~v~Dlp 108 (118)
.....+|+|+|| |+|. ..+++..| +.+++..|+-
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis 101 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLN 101 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECC
Confidence 556679999999 4477 44566666 6889999973
No 293
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=89.24 E-value=0.41 Score=34.71 Aligned_cols=43 Identities=16% Similarity=0.176 Sum_probs=31.4
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.+.+.+. +.....|||+|+++|.++.-.+....--++..+|+-
T Consensus 85 ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG 127 (321)
T 3lkz_A 85 WLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKG 127 (321)
T ss_dssp HHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCC
T ss_pred HHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcC
Confidence 3444555 666679999999999999966666554467778863
No 294
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=88.23 E-value=0.34 Score=36.02 Aligned_cols=33 Identities=15% Similarity=0.099 Sum_probs=28.5
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
....++||+|++.|..+..++++ ..+++..|.-
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~ 242 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNG 242 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSS
T ss_pred CCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhh
Confidence 35679999999999999999988 5789999964
No 295
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=87.91 E-value=0.17 Score=39.21 Aligned_cols=38 Identities=18% Similarity=0.024 Sum_probs=28.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCC---------------CCcEEEeec-hHHhhhC
Q 043449 77 KSVVDVGGGIGASLNMIISKYP---------------SIKGINFDL-PHVIQDA 114 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P---------------~l~~~v~Dl-p~vi~~a 114 (118)
.+|+|.+||+|.++.++.+..+ ..++..+|+ |.++..|
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA 299 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLA 299 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHH
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHH
Confidence 4899999999999998865432 456788887 5555443
No 296
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=87.16 E-value=0.5 Score=32.80 Aligned_cols=38 Identities=18% Similarity=0.113 Sum_probs=30.2
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
....|+|..+|+|+.+.+..+. +-+++.+|+ |..++.+
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~ 250 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQA 250 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHH
Confidence 4568999999999999998887 467888898 4455443
No 297
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=87.02 E-value=0.27 Score=38.17 Aligned_cols=40 Identities=15% Similarity=-0.012 Sum_probs=30.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHC---CCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKY---PSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~---P~l~~~v~Dl-p~vi~~a 114 (118)
...+|+|.+||+|.++.++.+.. +..++..+|+ |.++..|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA 264 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLA 264 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHH
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHH
Confidence 34689999999999999999885 3567888887 5554443
No 298
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=86.62 E-value=1.9 Score=31.42 Aligned_cols=78 Identities=15% Similarity=0.246 Sum_probs=48.1
Q ss_pred CCcccccccCc--hHHHHHHHHHHhcchhhHHHHHHhc-CCCCCCceEEEecCCCcHHHHHHHHH-CCCCcEEEeechHH
Q 043449 35 MNTYEYHGKDP--RYNKIFNNGMFSHSTITMKKFLENY-KGFEGLKSVVDVGGGIGASLNMIISK-YPSIKGINFDLPHV 110 (118)
Q Consensus 35 ~~~~e~~~~~p--~~~~~F~~~M~~~~~~~~~~~~~~~-~~~~~~~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dlp~v 110 (118)
.+++.++-+.+ ...-..++++...++.. ..++..| ....+...||-+|+|.=+....+... .+.++.+=.|+|+|
T Consensus 48 Dpf~~~Fv~~~~~rr~P~inrG~~~Rt~~i-D~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~v 126 (334)
T 3iei_A 48 DPYIQHFVRLSKERKAPEINRGYFARVHGV-SQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMI 126 (334)
T ss_dssp CSSGGGTSCCCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHH
T ss_pred CHHHHHHcCcccCCCCchHHHHHHHHHHHH-HHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHH
Confidence 44555554322 22234455554444432 2222222 10124678999999999999999876 36889999999999
Q ss_pred hhh
Q 043449 111 IQD 113 (118)
Q Consensus 111 i~~ 113 (118)
++.
T Consensus 127 i~~ 129 (334)
T 3iei_A 127 VTR 129 (334)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 299
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.42 E-value=0.66 Score=33.68 Aligned_cols=31 Identities=35% Similarity=0.445 Sum_probs=26.3
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
++||=||||.+-+..+ |++..++++++++|.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 5788899999877666 788889999999984
No 300
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=84.51 E-value=0.87 Score=31.80 Aligned_cols=33 Identities=24% Similarity=0.330 Sum_probs=26.4
Q ss_pred CCceEEEecCCCcHHHHHHHHH-------CCC-----CcEEEeec
Q 043449 75 GLKSVVDVGGGIGASLNMIISK-------YPS-----IKGINFDL 107 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~-------~P~-----l~~~v~Dl 107 (118)
+..+|++||.|+|..+..+++. +|+ ++++.++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~ 104 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 104 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEEC
Confidence 3578999999999998887665 784 57777775
No 301
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=84.37 E-value=1.7 Score=31.13 Aligned_cols=38 Identities=18% Similarity=0.382 Sum_probs=30.3
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC-CCcEEEeechHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP-SIKGINFDLPHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P-~l~~~v~Dlp~vi~~a 114 (118)
+...||++|+|-=+....+. .| +++.+-.|+|.|++..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k 140 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYK 140 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHH
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHH
Confidence 45679999999888876665 35 4889999999998864
No 302
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=80.86 E-value=3.1 Score=31.46 Aligned_cols=56 Identities=16% Similarity=0.301 Sum_probs=34.6
Q ss_pred CchHHHHHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCCcHHHHHHHHHCCC-----CcEEEeec
Q 043449 44 DPRYNKIFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGIGASLNMIISKYPS-----IKGINFDL 107 (118)
Q Consensus 44 ~p~~~~~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~~P~-----l~~~v~Dl 107 (118)
.|+....|.+....+-. ..+... +...||++|+|+|+++..+++.... .+.++.+.
T Consensus 114 APeiS~~FGe~la~~~~---~~~~~~-----g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~ 174 (432)
T 4f3n_A 114 APELSPLFAQTLARPVA---QALDAS-----GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDL 174 (432)
T ss_dssp CGGGHHHHHHHHHHHHH---HHHHHH-----TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred chhhhHHHHHHHHHHHH---HHHHhc-----CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEc
Confidence 46667777765544321 222111 1358999999999999988765422 25666665
No 303
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=79.68 E-value=1.8 Score=32.03 Aligned_cols=31 Identities=29% Similarity=0.424 Sum_probs=25.3
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
++||=||||.+.+..+ |.+..|+.++|++|.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 4688899999876554 777789999999984
No 304
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=77.91 E-value=1.6 Score=31.45 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=28.8
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCC----CcEEEeec
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPS----IKGINFDL 107 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~----l~~~v~Dl 107 (118)
+...||=||+|.|....-|.+.+|+ ++.+++|-
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDP 96 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 96 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcC
Confidence 3469999999999999999998887 58999994
No 305
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=73.30 E-value=4.6 Score=29.93 Aligned_cols=30 Identities=23% Similarity=0.153 Sum_probs=24.2
Q ss_pred eEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
+||=||||.+-+..+ +++..++.+++++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 578899999876655 677788899999885
No 306
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=73.16 E-value=3.3 Score=29.36 Aligned_cols=31 Identities=23% Similarity=0.216 Sum_probs=24.6
Q ss_pred HHHHhcCCCCCCceEEEecCCCcHHHHHHHHH
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGASLNMIISK 96 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~ 96 (118)
++-+.+ .+....+|||+|++.|..+.-.++.
T Consensus 64 EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~ 94 (269)
T 2px2_A 64 WLVERR-FVQPIGKVVDLGCGRGGWSYYAATM 94 (269)
T ss_dssp HHHHTT-SCCCCEEEEEETCTTSHHHHHHTTS
T ss_pred HHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhh
Confidence 444554 3677889999999999999888775
No 307
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=70.19 E-value=3.2 Score=31.79 Aligned_cols=20 Identities=35% Similarity=0.517 Sum_probs=13.5
Q ss_pred HHHhcCCCCCCceEEEecCCC
Q 043449 66 FLENYKGFEGLKSVVDVGGGI 86 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~ 86 (118)
+...++ ..+...|+|||||+
T Consensus 129 v~~~~~-~~~~~lviDIGGGS 148 (513)
T 1u6z_A 129 VEHTQP-EKGRKLVIDIGGGS 148 (513)
T ss_dssp HHHHSC-CCSCEEEEEECSSC
T ss_pred HHhhcc-CCCCEEEEEECCCc
Confidence 344444 43457899999985
No 308
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=69.56 E-value=3.7 Score=29.37 Aligned_cols=20 Identities=25% Similarity=0.506 Sum_probs=13.6
Q ss_pred HHHhcCCCC-CCceEEEecCCC
Q 043449 66 FLENYKGFE-GLKSVVDVGGGI 86 (118)
Q Consensus 66 ~~~~~~~~~-~~~~vvDvGGg~ 86 (118)
+...++ ++ ....|+|||||+
T Consensus 122 v~~~~~-~~~~~~lviDIGGGS 142 (315)
T 3mdq_A 122 VQQAVP-MEDHISLAMDIGGGS 142 (315)
T ss_dssp HHHHSC-CTTCCEEEEEECSSC
T ss_pred HHhcCC-CCCCCEEEEEeCCCc
Confidence 344455 53 457899999985
No 309
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=66.98 E-value=5.2 Score=28.09 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=24.5
Q ss_pred EEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 79 VVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 79 vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
|+=||||..-++.+ ++++.++++++++|.
T Consensus 68 V~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 68 VIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred EEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 77799999888877 556789999999985
No 310
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=66.55 E-value=5.1 Score=29.11 Aligned_cols=26 Identities=23% Similarity=0.390 Sum_probs=18.7
Q ss_pred ceEEEecCCCcH--HHHHHHHHCCCCcE
Q 043449 77 KSVVDVGGGIGA--SLNMIISKYPSIKG 102 (118)
Q Consensus 77 ~~vvDvGGg~G~--~~~~l~~~~P~l~~ 102 (118)
.+||=+|||+|. ++.+|.+...++.+
T Consensus 5 ~~IV~igGGtGl~~ll~gLk~~~~~iTa 32 (326)
T 2q7x_A 5 PXITVIGGGTGSPVILXSLREXDVEIAA 32 (326)
T ss_dssp CEEEEECCCTTHHHHHHHHHHSSCEEEE
T ss_pred CeEEEEcCcccHHHHHHHhccCCCCeEE
Confidence 579999999995 56666655555664
No 311
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=65.48 E-value=6.3 Score=28.30 Aligned_cols=31 Identities=10% Similarity=0.044 Sum_probs=23.6
Q ss_pred eEEEecCCCcHHHHH--HHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNM--IISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.+ +++++|+++++|+|.-
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~ 34 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKN 34 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 477799997766555 5566789999999973
No 312
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.30 E-value=5.2 Score=31.55 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=34.1
Q ss_pred CCceEEEecCCCcHHHHHHHHHCC--------CCcEEEeechHHhhh
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYP--------SIKGINFDLPHVIQD 113 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P--------~l~~~v~Dlp~vi~~ 113 (118)
+...||-+|+|.=+....+...+| +++.+=.|+|+|++.
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~ 153 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKI 153 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHH
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHH
Confidence 467899999999999999998876 778888999999864
No 313
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=64.64 E-value=6.4 Score=29.61 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=27.0
Q ss_pred CceEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 76 LKSVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
...||=||||.+-+..+ +.++.++.+++++|.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~ 44 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSE 44 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 35688899999888877 778888999999985
No 314
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=64.33 E-value=5.1 Score=25.79 Aligned_cols=29 Identities=17% Similarity=0.101 Sum_probs=22.9
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
|+=||+|..-++.++.-+--.++++|+|.
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 77799998777777655556899999995
No 315
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=62.14 E-value=9.9 Score=28.19 Aligned_cols=33 Identities=18% Similarity=0.062 Sum_probs=25.7
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeechH
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp~ 109 (118)
.+||=||||.+-++.+ |+++.|+.+++++|.-+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 4688899998876655 67778899999999644
No 316
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=61.52 E-value=6.2 Score=28.06 Aligned_cols=30 Identities=23% Similarity=0.196 Sum_probs=23.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
+|+=||||..-++.++.-+.-+++++|+|.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 578899998777777655556889999986
No 317
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=60.23 E-value=4.5 Score=29.60 Aligned_cols=28 Identities=29% Similarity=0.406 Sum_probs=18.8
Q ss_pred CCceEEEecCCCcH--HHHHHHHHCCCCcE
Q 043449 75 GLKSVVDVGGGIGA--SLNMIISKYPSIKG 102 (118)
Q Consensus 75 ~~~~vvDvGGg~G~--~~~~l~~~~P~l~~ 102 (118)
+..+||=+|||+|. ++.+|.+...++.+
T Consensus 9 ~~~kIVvigGGtGl~~ll~gLk~~~~~iTa 38 (341)
T 2p0y_A 9 QRPKIVVIGGGTGLPVVLNGLRKQAVDITA 38 (341)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHSSSEEEE
T ss_pred CCCeEEEECCcccHHHHHHHHHhCCCCeEE
Confidence 34689999999995 55566655455654
No 318
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=59.56 E-value=8.4 Score=27.95 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=23.9
Q ss_pred ceEEEecCCCcHHH--HHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASL--NMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~--~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||..-++ ..|++++|.++++|+|..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 34888999965443 446677889999999964
No 319
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=58.01 E-value=8.2 Score=28.36 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=23.5
Q ss_pred ceEEEecCCCcHHHHHHHHHC---CCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKY---PSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~---P~l~~~v~Dl 107 (118)
.+||=||||.+.+..+..-+. ++.+++++|.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~ 38 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA 38 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC
Confidence 578889999887766544333 7899999985
No 320
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=57.93 E-value=7.8 Score=26.67 Aligned_cols=32 Identities=9% Similarity=0.044 Sum_probs=25.3
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||.+-++.+..-+..+.+++++|.-
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 45888999998888776555568899999963
No 321
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=57.72 E-value=10 Score=28.03 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=25.4
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeechH
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp~ 109 (118)
..||=||||.+-++.+ ++++.|+.+++++|..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 37 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQA 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCC
Confidence 3578899998876554 66778899999998643
No 322
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=57.37 E-value=14 Score=26.15 Aligned_cols=32 Identities=13% Similarity=-0.038 Sum_probs=26.4
Q ss_pred CCceEEEecCCCcHHHHHHHHHC-----CCCcEEEee
Q 043449 75 GLKSVVDVGGGIGASLNMIISKY-----PSIKGINFD 106 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~-----P~l~~~v~D 106 (118)
....||.+|...|.-++.+++.. |+-+++.+|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~D 142 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVAD 142 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEE
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEE
Confidence 35789999999999888876654 577899998
No 323
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=56.96 E-value=8 Score=26.67 Aligned_cols=30 Identities=10% Similarity=0.220 Sum_probs=23.9
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
|+=||||.+-+..++.-+.-+.+++++|..
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~V~liE~~ 38 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLKTVMIERG 38 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 777999999888776655567899999853
No 324
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=56.86 E-value=8.8 Score=29.09 Aligned_cols=32 Identities=16% Similarity=0.017 Sum_probs=24.9
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
-++||=||||.|.+..+-.-+..+.++|+.|.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECC
Confidence 46799999999887776555556788999984
No 325
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=56.76 E-value=11 Score=27.84 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=26.6
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||.+-+..+..-+..+.+++++|..
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 35788999999988887777789999999953
No 326
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=56.01 E-value=5.9 Score=29.97 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=23.9
Q ss_pred ceEEEecCCCcHHHHHHHHHC------------CCCcEEEeechH
Q 043449 77 KSVVDVGGGIGASLNMIISKY------------PSIKGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~------------P~l~~~v~Dlp~ 109 (118)
..||=||||..-++.++.-+. ++++++|+|.+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 457889999766655544333 789999999754
No 327
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=55.34 E-value=7.6 Score=28.40 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=27.5
Q ss_pred ceEEEecCCCcHHHHHHHHHCCC----CcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPS----IKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~----l~~~v~Dl 107 (118)
..||=+|.+.|.-..-|.+.||+ ++.+++|-
T Consensus 77 ~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp 111 (348)
T 1vpt_A 77 ATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDG 111 (348)
T ss_dssp CEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECC
Confidence 49999999999999888888876 79999993
No 328
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=55.03 E-value=13 Score=26.74 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=26.6
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||..-++.++.-+...++++|+|.-
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 46888999988888887777778999999963
No 329
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.89 E-value=9 Score=28.03 Aligned_cols=31 Identities=29% Similarity=0.401 Sum_probs=23.1
Q ss_pred ceEEEecCCCcHHHHHHHHH--CCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISK--YPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~--~P~l~~~v~Dl 107 (118)
..||=||||.+.++.+..-+ .++.+++|+|.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~ 35 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECC
Confidence 46888999988776654333 38899999985
No 330
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=54.86 E-value=9.2 Score=26.96 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=24.7
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..||=||||.+-++.++.-+...++++++|.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 45 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIES 45 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 4588899999888777665556889999985
No 331
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=54.60 E-value=8.3 Score=29.20 Aligned_cols=33 Identities=18% Similarity=0.160 Sum_probs=23.7
Q ss_pred ceEEEecCCCcHHHHHHHHH--C-CCCcEEEeechH
Q 043449 77 KSVVDVGGGIGASLNMIISK--Y-PSIKGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~--~-P~l~~~v~Dlp~ 109 (118)
..||=||||..-++.++.-+ + ++++++|+|.+.
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 45778999977665554333 3 789999999754
No 332
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=54.48 E-value=9 Score=29.20 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=24.3
Q ss_pred CceEEEecCCCcHHHHHH--HHHC-CCCcEEEeechH
Q 043449 76 LKSVVDVGGGIGASLNMI--ISKY-PSIKGINFDLPH 109 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l--~~~~-P~l~~~v~Dlp~ 109 (118)
...||=||||..-.+.++ ++.. +.++++|+|.++
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 456888999976655553 3433 889999999743
No 333
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=54.42 E-value=32 Score=26.22 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=25.5
Q ss_pred HHHHhcCCCCCCceEEEecCCCcH-----HHHHHHHHCCCCc
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGA-----SLNMIISKYPSIK 101 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~ 101 (118)
..++..|.+..+..+.++|||+|+ ++..+...||+..
T Consensus 124 ~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~ 165 (475)
T 3cb2_A 124 READGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKL 165 (475)
T ss_dssp HHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSE
T ss_pred HHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCc
Confidence 345556656678899999999974 3444556688753
No 334
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=53.85 E-value=9.7 Score=26.26 Aligned_cols=29 Identities=14% Similarity=0.076 Sum_probs=22.6
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
|+=||||.+-++.++.-+.-.++++++|.
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 77799999888877654445788999984
No 335
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=53.84 E-value=7.6 Score=28.12 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=23.3
Q ss_pred ceEEEecCCCcHHHHHHHHHC---CCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKY---PSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~---P~l~~~v~Dlp 108 (118)
.+||=||||.+-++.+..-+. ++.+++++|.-
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~ 36 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKS 36 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCC
Confidence 368889999877666644333 78999999853
No 336
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=53.84 E-value=12 Score=28.59 Aligned_cols=34 Identities=18% Similarity=0.100 Sum_probs=26.6
Q ss_pred CceEEEecCCCcHHHHH--HHHHCCCCcEEEeechH
Q 043449 76 LKSVVDVGGGIGASLNM--IISKYPSIKGINFDLPH 109 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp~ 109 (118)
..+||=||||.+-++.+ ++++.|+.+++++|..+
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~ 71 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE 71 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 46799999998876554 67778899999998643
No 337
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=53.05 E-value=11 Score=26.14 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=23.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||.+-++.+..-+...++++++|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 36 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDP 36 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 3578899998887777655555789999985
No 338
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=52.37 E-value=10 Score=28.21 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=25.5
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||.+-+..+..-+..+.+++++|..
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 35888999999888776666578999999953
No 339
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=52.27 E-value=13 Score=26.66 Aligned_cols=32 Identities=13% Similarity=0.154 Sum_probs=25.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||..-++.++.-+-..++++|+|..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 35788999988888777666678999999975
No 340
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=52.18 E-value=11 Score=27.14 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=25.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||.+-++.++.-+..+++++|+|..
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence 46888999988877777666678999999974
No 341
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=51.68 E-value=8.3 Score=29.49 Aligned_cols=11 Identities=36% Similarity=0.438 Sum_probs=9.1
Q ss_pred CceEEEecCCC
Q 043449 76 LKSVVDVGGGI 86 (118)
Q Consensus 76 ~~~vvDvGGg~ 86 (118)
...|+|||||+
T Consensus 141 ~~lvvDIGGGS 151 (508)
T 3hi0_A 141 DGIAGDLGGGS 151 (508)
T ss_dssp EEEEEEECSSC
T ss_pred CeEEEEeCCCc
Confidence 35899999985
No 342
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=51.66 E-value=9.1 Score=27.73 Aligned_cols=15 Identities=40% Similarity=0.492 Sum_probs=11.1
Q ss_pred CCceEEEecCCCcHH
Q 043449 75 GLKSVVDVGGGIGAS 89 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~ 89 (118)
....++|||||+=.+
T Consensus 146 ~~~lviDIGGGStel 160 (343)
T 3cer_A 146 APYLVVDLGGGSTEL 160 (343)
T ss_dssp SSEEEEEECSSCEEE
T ss_pred CCEEEEEeCCCceEE
Confidence 346899999986443
No 343
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=51.63 E-value=11 Score=27.97 Aligned_cols=32 Identities=13% Similarity=0.092 Sum_probs=25.7
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||.+-+..+..-+..+.+++++|..
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 35778999999888877666678999999963
No 344
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=51.63 E-value=5.7 Score=24.95 Aligned_cols=47 Identities=21% Similarity=0.340 Sum_probs=29.6
Q ss_pred HHhcCCCCCCceEEEecCCC-cHHHHHHHHHCCCCcE-EEeechHHhhhC
Q 043449 67 LENYKGFEGLKSVVDVGGGI-GASLNMIISKYPSIKG-INFDLPHVIQDA 114 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~-G~~~~~l~~~~P~l~~-~v~Dlp~vi~~a 114 (118)
++.++. .+.-.++|+-||+ =..+..++...+++++ +..++|-+++.+
T Consensus 56 i~~~~~-~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi~GvNlpmlle~~ 104 (142)
T 3bed_A 56 LKEAGN-VPTLVLADLXGGTPCNVAMMAMGTYPQLRVVAGLNLAMAIEAA 104 (142)
T ss_dssp HHHHCS-CCEEEEESSTTSHHHHHHHHHTTTCTTEEEEESCCHHHHHHHH
T ss_pred HHhcCC-CCEEEEEECCCCHHHHHHHHHhccCCCEEEEeCCCHHHHHHHH
Confidence 344553 5667899995444 5556666655555553 456999887754
No 345
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=51.50 E-value=14 Score=27.74 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=27.0
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
..||=||||.+-++.++.-+...++++|+|...
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 358889999988888877777789999999754
No 346
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=51.43 E-value=18 Score=27.74 Aligned_cols=30 Identities=23% Similarity=0.172 Sum_probs=21.1
Q ss_pred HHHhcCCCCCCceEEEecCCCcHHHHHHHHH
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGASLNMIISK 96 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~~~~~l~~~ 96 (118)
+++..+ -....+|+|-.||+|.++.+..+.
T Consensus 209 mv~l~~-p~~~~~I~DPacGsGgfL~~a~~~ 238 (530)
T 3ufb_A 209 MVEVMD-PQLGESVLDPACGTGGFLVEAFEH 238 (530)
T ss_dssp HHHHHC-CCTTCCEEETTCTTTHHHHHHHHH
T ss_pred HHHhhc-cCCCCEEEeCCCCcchHHHHHHHH
Confidence 334443 334468999999999999876553
No 347
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=51.18 E-value=11 Score=26.33 Aligned_cols=31 Identities=6% Similarity=-0.022 Sum_probs=24.9
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||..-++.++.-+-..++++|+|.-
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4778999988777776666678999999974
No 348
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=51.12 E-value=12 Score=25.14 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=23.0
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.|+=||||.+-+..+..-+.-..+++++|.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 578899998887776555545689999994
No 349
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=51.06 E-value=12 Score=25.46 Aligned_cols=31 Identities=23% Similarity=0.072 Sum_probs=24.4
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||.+-++.+..-+.-+.+++++|.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 4688899998887777655555788999996
No 350
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=50.93 E-value=8.7 Score=27.46 Aligned_cols=12 Identities=58% Similarity=0.839 Sum_probs=9.8
Q ss_pred CCceEEEecCCC
Q 043449 75 GLKSVVDVGGGI 86 (118)
Q Consensus 75 ~~~~vvDvGGg~ 86 (118)
....|+|||||+
T Consensus 138 ~~~lvvDIGGGS 149 (315)
T 1t6c_A 138 GEVCVVDQGGGS 149 (315)
T ss_dssp SEEEEEEEETTE
T ss_pred CCEEEEEeCCCc
Confidence 457899999985
No 351
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=50.91 E-value=8.1 Score=23.95 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=28.7
Q ss_pred HHhcCCCCCCceEEEecCCC-cHHHHHHHHHCCCCcE-EEeechHHhhh
Q 043449 67 LENYKGFEGLKSVVDVGGGI-GASLNMIISKYPSIKG-INFDLPHVIQD 113 (118)
Q Consensus 67 ~~~~~~~~~~~~vvDvGGg~-G~~~~~l~~~~P~l~~-~v~Dlp~vi~~ 113 (118)
++.++.-++.-.++|+=||+ =..+..++..++++++ +..++|-+++.
T Consensus 52 i~~~~~~~gvliLtDl~GGSp~n~a~~~~~~~~~v~vi~GvNlpmlle~ 100 (135)
T 1pdo_A 52 LAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVET 100 (135)
T ss_dssp HTTSCCTTCEEEEESSTTSHHHHHHHHHHTTCTTEEEEESCCHHHHHHH
T ss_pred HHhcCCCCCEEEEEECCCCCHHHHHHHHHhccCCEEEEeCCCHHHHHHH
Confidence 33444123567799994444 5566666666665553 45699987764
No 352
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=50.56 E-value=4.8 Score=25.19 Aligned_cols=36 Identities=14% Similarity=0.079 Sum_probs=22.0
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechHHh
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPHVI 111 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi 111 (118)
.+.-.++|+||+.=....++....| ++.+.|+|-|+
T Consensus 59 dgVlvltDLGgsp~N~~~al~~~~~--~v~viNlPmve 94 (131)
T 3ct6_A 59 DNLLTFFDLGSARMNLDLVSEMTDK--ELTIFNVPLIE 94 (131)
T ss_dssp SEEEEEESSGGGHHHHHHHHHTCSS--EEEECCSCHHH
T ss_pred CCEEEEEeCCCChHHHHHHHHhcCC--CEEEEEhhHHH
Confidence 4567799997666333333333334 56566999883
No 353
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=50.48 E-value=13 Score=26.94 Aligned_cols=31 Identities=16% Similarity=0.199 Sum_probs=24.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCc-EEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIK-GINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~-~~v~Dlp 108 (118)
.|+=||||.+-++.++.-+...++ ++|+|.-
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~ 37 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAGIGKVTLLESS 37 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 578899998877777666656899 9999963
No 354
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=50.13 E-value=7.4 Score=25.45 Aligned_cols=34 Identities=21% Similarity=0.094 Sum_probs=24.2
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 67 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar 100 (162)
T 2vvp_A 67 VLGGSGNGEQIAANKVPGARCALAWSVQTAALAR 100 (162)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHH
T ss_pred EEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHH
Confidence 4567888777788999999985554455555443
No 355
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=49.67 E-value=7 Score=25.18 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=24.1
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 64 liCGTGiG~siaANKv~GIRAal~~d~~sA~~ar 97 (149)
T 2vvr_A 64 LICGTGVGISIAANKFAGIRAVVCSEPYSAQLSR 97 (149)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHH
T ss_pred EEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHH
Confidence 4567888777888999999986554455555443
No 356
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=49.50 E-value=13 Score=26.65 Aligned_cols=31 Identities=16% Similarity=0.182 Sum_probs=24.0
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||.+-++.++.-+...++++|+|.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 3588899998777776655556889999996
No 357
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=49.46 E-value=15 Score=27.45 Aligned_cols=31 Identities=16% Similarity=0.033 Sum_probs=25.8
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.|-++.++.-+--.++++++|..
T Consensus 10 DvvVIGgG~aGl~aA~~la~~G~~V~liE~~ 40 (492)
T 3ic9_A 10 DVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG 40 (492)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCSCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3777999999988887777778999999963
No 358
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=49.44 E-value=16 Score=27.75 Aligned_cols=37 Identities=22% Similarity=0.479 Sum_probs=26.4
Q ss_pred HHHHhcCCCCCCceEEEecCCCcH-----HHHHHHHHCCCCc
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGA-----SLNMIISKYPSIK 101 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~ 101 (118)
..++..|.+.++..+-.+|||+|+ ++..|...||...
T Consensus 124 k~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~ey~kk~ 165 (451)
T 3ryc_A 124 KLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKS 165 (451)
T ss_dssp HHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHhcCcce
Confidence 345556656778889999999884 4445677898753
No 359
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=49.42 E-value=17 Score=26.70 Aligned_cols=31 Identities=16% Similarity=0.327 Sum_probs=23.7
Q ss_pred eEEEecCCCcHHHHH--HHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNM--IISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+ +++..|+.+++++|..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~ 34 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMN 34 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 477799998776554 5566789999999964
No 360
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=49.40 E-value=13 Score=27.43 Aligned_cols=31 Identities=23% Similarity=0.243 Sum_probs=26.2
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.++.-+..+++++|+|.-
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~ 38 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRGLKILLVDSK 38 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSSCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4788999998888888777788999999974
No 361
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=48.98 E-value=10 Score=26.11 Aligned_cols=32 Identities=25% Similarity=0.237 Sum_probs=24.9
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
...||=||||.+-++.+..-+.-..+++++|.
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 46788899998877776555555788999986
No 362
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=48.96 E-value=9.2 Score=27.34 Aligned_cols=32 Identities=16% Similarity=0.165 Sum_probs=24.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.|+=||||.+-++.++.-+...++++|+|...
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 47889999888777766555689999999643
No 363
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=48.83 E-value=9.1 Score=28.70 Aligned_cols=29 Identities=17% Similarity=0.110 Sum_probs=24.3
Q ss_pred eEEEecCCCcHHHHHHHHHC-CCCcEEEee
Q 043449 78 SVVDVGGGIGASLNMIISKY-PSIKGINFD 106 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~-P~l~~~v~D 106 (118)
.||=||||.+-++.++.-+- ...+++++|
T Consensus 5 dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 5 DLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 47889999999888776665 789999999
No 364
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=48.19 E-value=7.9 Score=28.97 Aligned_cols=32 Identities=28% Similarity=0.226 Sum_probs=22.4
Q ss_pred eEEEecCCCcHHHHHHHHHC---CCCcEEEeechH
Q 043449 78 SVVDVGGGIGASLNMIISKY---PSIKGINFDLPH 109 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~---P~l~~~v~Dlp~ 109 (118)
.||=||||..-.+.++.-+. ++++++|+|...
T Consensus 4 dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 4 SVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred eEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 57779999776666544444 789999999764
No 365
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=48.05 E-value=17 Score=26.91 Aligned_cols=32 Identities=13% Similarity=0.022 Sum_probs=25.3
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||.+-++.+..-+-...+++++|..
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45888999998887776655567899999964
No 366
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=47.97 E-value=17 Score=26.37 Aligned_cols=33 Identities=6% Similarity=-0.116 Sum_probs=26.2
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
+..+||=||||.+.+..+..-+.++.+++++|.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~ 40 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINS 40 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEEC
Confidence 356788899998877776555788899999875
No 367
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=47.97 E-value=13 Score=26.30 Aligned_cols=32 Identities=25% Similarity=0.296 Sum_probs=23.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.||=||||..-++.++.-+...++++|+|...
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 47779999876666655554588999999754
No 368
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=47.63 E-value=15 Score=25.65 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=23.9
Q ss_pred eEEEecCCCcHHHHHHHHHC---CCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKY---PSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~---P~l~~~v~Dlp 108 (118)
.|+=||||..-++.+..-+- .+++++|+|.-
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECC
Confidence 57789999877777665555 78899999963
No 369
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=47.52 E-value=15 Score=25.29 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=24.3
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||.+-++.++.-+....+++++|..
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 48 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKA 48 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 45888999988777776555557899999863
No 370
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=47.40 E-value=11 Score=25.89 Aligned_cols=29 Identities=28% Similarity=0.313 Sum_probs=22.5
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
|+=||||.+-++.++..+.-+++++++|.
T Consensus 7 vvIIG~GpAGl~AA~~la~~g~~v~liE~ 35 (314)
T 4a5l_A 7 VVIIGSGPAAHTAAIYLGRSSLKPVMYEG 35 (314)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 77799998888777655545788888885
No 371
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=47.20 E-value=12 Score=25.04 Aligned_cols=37 Identities=11% Similarity=0.134 Sum_probs=23.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
+..+|++||.| .-++.+++ .++-+++-.|. |+-.+.|
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~a 67 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMM 67 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHH
Confidence 45789999974 43333444 56777777774 5554444
No 372
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=47.15 E-value=8.6 Score=24.76 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=24.2
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 63 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar 96 (149)
T 3he8_A 63 VICGTGLGISIAANKVPGIRAAVCTNSYMARMSR 96 (149)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHH
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHH
Confidence 4457787777788999999986555466555544
No 373
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=46.87 E-value=15 Score=26.34 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=24.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||..-++.++.-+.-.++++|+|.-
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45788999987776665555558899999963
No 374
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=46.73 E-value=54 Score=20.84 Aligned_cols=80 Identities=15% Similarity=0.093 Sum_probs=46.9
Q ss_pred CCCcccccccCch-HHH---HHHHHHHhcchhhHHHHHHhcCCCCCCceEEEecCCC-------cHHHHHHHHHCCCCcE
Q 043449 34 GMNTYEYHGKDPR-YNK---IFNNGMFSHSTITMKKFLENYKGFEGLKSVVDVGGGI-------GASLNMIISKYPSIKG 102 (118)
Q Consensus 34 g~~~~e~~~~~p~-~~~---~F~~~M~~~~~~~~~~~~~~~~~~~~~~~vvDvGGg~-------G~~~~~l~~~~P~l~~ 102 (118)
|.++.+|++...+ .++ ++.+.|....... .....+..+.+...|||....- .-....+.+.+|++.+
T Consensus 11 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~ 88 (167)
T 1z6n_A 11 GEDFAAFVGHGLATEQGAVARFRQKLESNGLPS--ALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIEL 88 (167)
T ss_dssp SBCHHHHHHTSCHHHHHHHHHHHHHHHHHCCCH--HHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEE
T ss_pred CCCHHHHHHHhHHHHHHHHHHHHHHHHccCCCH--HHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEE
Confidence 4567777776655 445 6777776654321 1111121145567899998642 2244557788998888
Q ss_pred EEeechHHhhhCC
Q 043449 103 INFDLPHVIQDAP 115 (118)
Q Consensus 103 ~v~Dlp~vi~~a~ 115 (118)
+..|...--+.++
T Consensus 89 ~~v~~d~~~~~~~ 101 (167)
T 1z6n_A 89 AIISKGRAEDDLR 101 (167)
T ss_dssp EEECHHHHHHHTT
T ss_pred EEEECCCCHHHHH
Confidence 8888655444444
No 375
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=46.67 E-value=19 Score=26.63 Aligned_cols=31 Identities=16% Similarity=0.076 Sum_probs=25.8
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.++.-+--..+++++|.+
T Consensus 7 DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 7 DLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred cEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4777999999988887777778999999963
No 376
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.60 E-value=14 Score=27.76 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=24.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+..-+..+.+++++|..
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 34 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHNAKVALVEKS 34 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3777999998887776665568999999964
No 377
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=46.43 E-value=18 Score=27.27 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=24.6
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp 108 (118)
.+||=||||.+-++.+ ++++.|+.+++++|..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~ 35 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERG 35 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 3688899997765554 6677789999999863
No 378
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=46.29 E-value=8.3 Score=26.38 Aligned_cols=34 Identities=18% Similarity=-0.007 Sum_probs=24.6
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|++|+.+.-=|.....++
T Consensus 72 liCGTGiG~siaANKv~GIRAAlc~d~~sA~laR 105 (214)
T 3ono_A 72 TGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFN 105 (214)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHH
T ss_pred EEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHH
Confidence 5667888888888999999986554465555443
No 379
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=46.06 E-value=7.8 Score=25.14 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=24.4
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 75 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar 108 (155)
T 1o1x_A 75 LLCGTGLGMSIAANRYRGIRAALCLFPDMARLAR 108 (155)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHH
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHH
Confidence 4567888777788999999986655466555544
No 380
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=45.94 E-value=16 Score=26.05 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=24.3
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||.+-++.++.-+.-.++++|+|.-
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~ 43 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNGWDVRLHEKS 43 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEecC
Confidence 35888999987777766555567899999863
No 381
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=45.80 E-value=15 Score=25.75 Aligned_cols=29 Identities=28% Similarity=0.344 Sum_probs=22.5
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
|+=||||..-++.++.-+--.++++|+|.
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~Er 35 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMIEK 35 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 66799997776666655556899999996
No 382
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=45.72 E-value=17 Score=25.14 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=24.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||.+-++.+..-+....+++++|..
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 45888999988877775554457899999864
No 383
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=45.67 E-value=18 Score=26.80 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=25.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||+|.+-++.+..-+..+.+++|+|.-
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34777999998888887666668899999853
No 384
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=45.61 E-value=11 Score=27.92 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=24.6
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
++||=||+|.+-++.+..-+.-..+++|++.-+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 468889999988888755555578898888633
No 385
>4dyq_A Gene 1 protein; GP1, octamer, DNA-binding, viral protein; 1.50A {Shigella phage SF6} PDB: 4dyc_A 4dyr_A 3hef_A 4dzj_A 4dzp_A
Probab=45.55 E-value=6.5 Score=24.64 Aligned_cols=53 Identities=9% Similarity=0.222 Sum_probs=35.5
Q ss_pred CchHHHHhcCCchhh--hccCC----CcccccccCchHHHHHHHHHHhcchhhHHHHHH
Q 043449 16 YHLKDAVLEGGIPFN--MAYGM----NTYEYHGKDPRYNKIFNNGMFSHSTITMKKFLE 68 (118)
Q Consensus 16 ~~L~~~vr~g~~~f~--~~~g~----~~~e~~~~~p~~~~~F~~~M~~~~~~~~~~~~~ 68 (118)
..+-+.+.+|.+--+ ...|. ++|.|+.++|++.+.+.++...........+.+
T Consensus 19 e~I~~~i~~G~sl~~i~~~~~~ps~~T~~~W~~~~~ef~e~~~~Ar~~~~~~~~~~~~~ 77 (140)
T 4dyq_A 19 DDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYAKATEARADSIFEEIFE 77 (140)
T ss_dssp HHHHHHHHTTCCHHHHHTSTTCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcHHHHHhcCCCCCHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446667778876432 23344 589999999999999988877655544444433
No 386
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=45.29 E-value=16 Score=26.35 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=23.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.+..-+-...+++|+|.-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4777999988877775444457899999863
No 387
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=45.26 E-value=17 Score=27.14 Aligned_cols=31 Identities=19% Similarity=0.238 Sum_probs=23.8
Q ss_pred eEEEecCCCcHHHHH--HHHHCC-CCcEEEeech
Q 043449 78 SVVDVGGGIGASLNM--IISKYP-SIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~--l~~~~P-~l~~~v~Dlp 108 (118)
.||=||||.+-++.+ +++..| ..+++++|..
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~ 37 (499)
T 1xdi_A 4 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCD 37 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCC
Confidence 478899998876544 566677 8999999964
No 388
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=45.16 E-value=28 Score=26.15 Aligned_cols=26 Identities=23% Similarity=0.422 Sum_probs=18.9
Q ss_pred CceEEEecCCCcH-HHHHHHHHCCCCc
Q 043449 76 LKSVVDVGGGIGA-SLNMIISKYPSIK 101 (118)
Q Consensus 76 ~~~vvDvGGg~G~-~~~~l~~~~P~l~ 101 (118)
...+|=+||+.|- ++.=+..+||++-
T Consensus 127 ~~pwI~~GGSY~G~LaAW~R~kYP~lv 153 (472)
T 4ebb_A 127 DAPAIAFGGSYGGMLSAYLRMKYPHLV 153 (472)
T ss_dssp TCCEEEEEETHHHHHHHHHHHHCTTTC
T ss_pred CCCEEEEccCccchhhHHHHhhCCCeE
Confidence 3456779999655 5555888999984
No 389
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=45.09 E-value=12 Score=28.10 Aligned_cols=30 Identities=17% Similarity=0.041 Sum_probs=24.5
Q ss_pred ceEEEecCCCcHHHHHHHHHC-CCCcEEEee
Q 043449 77 KSVVDVGGGIGASLNMIISKY-PSIKGINFD 106 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~D 106 (118)
..||=||||.|-+..+..-+- ...+++++|
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 358889999998888766655 688999999
No 390
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=45.03 E-value=22 Score=26.13 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=24.7
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp 108 (118)
.+||=||||.+-+..+ +++..|+.+++++|..
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~ 37 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEAT 37 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 4688899998765544 6677789999999863
No 391
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=44.99 E-value=9.1 Score=26.49 Aligned_cols=34 Identities=15% Similarity=-0.019 Sum_probs=24.3
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.-=|.....++
T Consensus 89 liCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR 122 (231)
T 3c5y_A 89 TGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFG 122 (231)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHH
T ss_pred EEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHH
Confidence 5567888778888999999985554455555443
No 392
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=44.84 E-value=16 Score=26.56 Aligned_cols=33 Identities=15% Similarity=0.046 Sum_probs=23.9
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCC-cEEEeechH
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSI-KGINFDLPH 109 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l-~~~v~Dlp~ 109 (118)
..||=||||..-++.++.-+--.. +++|+|.-.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 347889999877776655544567 899998643
No 393
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=44.78 E-value=7.8 Score=26.56 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=24.5
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|++|+.+.-=|.....++
T Consensus 73 liCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR 106 (216)
T 2ppw_A 73 TGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYS 106 (216)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHH
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHH
Confidence 5667888888888999999985554455555443
No 394
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=44.75 E-value=15 Score=25.88 Aligned_cols=32 Identities=22% Similarity=0.141 Sum_probs=23.9
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||..-++.++.-+-..++++|+|..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 45777999977766665555568899999964
No 395
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=44.64 E-value=15 Score=27.28 Aligned_cols=31 Identities=10% Similarity=0.022 Sum_probs=25.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.++.-+--..+++++|..
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4788999999888887666668899999963
No 396
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=44.63 E-value=22 Score=26.10 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=23.4
Q ss_pred eEEEecCCCcHHHHH--HHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNM--IISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+ +++..|+.+++++|..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~ 34 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG 34 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECC
Confidence 477799998876555 5556689999999863
No 397
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=44.55 E-value=6.7 Score=28.49 Aligned_cols=26 Identities=35% Similarity=0.410 Sum_probs=16.8
Q ss_pred ceEEEecCCCcH--HHHHHHHHCCCCcE
Q 043449 77 KSVVDVGGGIGA--SLNMIISKYPSIKG 102 (118)
Q Consensus 77 ~~vvDvGGg~G~--~~~~l~~~~P~l~~ 102 (118)
.+||=+|||+|. ++.+|.+...++.+
T Consensus 5 ~kiv~lgGGtGl~~ll~gL~~~~~~iT~ 32 (323)
T 2o2z_A 5 KNVIVFGGGTGLSVLLRGLKTFPVSITA 32 (323)
T ss_dssp EEEEEEECSHHHHHHHHHHTTSSEEEEE
T ss_pred CeEEEECCcccHHHHHHHHHhcCCCeEE
Confidence 578899999995 45555444344554
No 398
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=44.19 E-value=26 Score=27.41 Aligned_cols=31 Identities=23% Similarity=0.148 Sum_probs=26.2
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..||=||||.+-+..+..-+-...+++++|.
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~ 404 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDA 404 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5799999999988888776667889999985
No 399
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=44.13 E-value=16 Score=27.24 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=24.2
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.|+=||||.+-+..+..-+--..+++++|.
T Consensus 27 dVvVIGgG~aGl~aA~~la~~G~~V~liEk 56 (491)
T 3urh_A 27 DLIVIGSGPGGYVCAIKAAQLGMKVAVVEK 56 (491)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 388899999888877666656789999995
No 400
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=44.04 E-value=10 Score=24.89 Aligned_cols=34 Identities=15% Similarity=0.101 Sum_probs=24.3
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 84 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR 117 (166)
T 3s5p_A 84 LVCGTGIGISIAANKMKGIRCALCSTEYDAEMAR 117 (166)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHH
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHH
Confidence 4567887777788999999986555466555544
No 401
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=43.43 E-value=20 Score=27.23 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=25.5
Q ss_pred HHHHhcCCCCCCceEEEecCCCcH-----HHHHHHHHCCCC
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGA-----SLNMIISKYPSI 100 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l 100 (118)
..++..|.+..+..+..+|||+|+ ++..+...||+.
T Consensus 126 ~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~l~e~y~~~ 166 (473)
T 2bto_A 126 YEIDKCDNVGGIIVLHAIGGGTGSGFGALLIESLKEKYGEI 166 (473)
T ss_dssp HHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHhCCCcceEEEEeeCCCCCCcchHHHHHHHHHHHcCCC
Confidence 345555645567889999999974 555667778865
No 402
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=43.41 E-value=21 Score=26.71 Aligned_cols=44 Identities=27% Similarity=0.451 Sum_probs=27.4
Q ss_pred HHHhcCCCCCCceEEEecCCCcH-----HHHHHHHHCCCCc---EEEeechH
Q 043449 66 FLENYKGFEGLKSVVDVGGGIGA-----SLNMIISKYPSIK---GINFDLPH 109 (118)
Q Consensus 66 ~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~---~~v~Dlp~ 109 (118)
.++..|.+..+..+.++|||+|+ ++..+...||+.. +.|+--|.
T Consensus 124 ~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~y~~~~~lt~~V~p~p~ 175 (426)
T 2btq_B 124 AVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQAYPKKRIFTFSVVPSPL 175 (426)
T ss_dssp HHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTTCTTSEEEEEEEECCGG
T ss_pred HHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHHcCcCceEEEEEecCCc
Confidence 44445544567889999999974 4455566687743 34444443
No 403
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=43.10 E-value=2.8 Score=19.02 Aligned_cols=10 Identities=60% Similarity=1.149 Sum_probs=7.2
Q ss_pred EEecCCCcHH
Q 043449 80 VDVGGGIGAS 89 (118)
Q Consensus 80 vDvGGg~G~~ 89 (118)
|.+|||.|.-
T Consensus 10 velgggpgag 19 (31)
T 1t0c_A 10 VELGGGPGAG 19 (31)
T ss_dssp TSCCCSTTSS
T ss_pred EEecCCCCcc
Confidence 5688888753
No 404
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=43.01 E-value=24 Score=24.18 Aligned_cols=31 Identities=19% Similarity=0.185 Sum_probs=23.0
Q ss_pred eEEEecCCCcHHHHHHHHHC-CCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKY-PSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dlp 108 (118)
.||=||||..-+..++.-+. |+++++++|..
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~ 72 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS 72 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred CEEEECccHHHHHHHHHHHHcCCCeEEEEECC
Confidence 47789999766666655544 69999999864
No 405
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=42.95 E-value=26 Score=23.87 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=23.1
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEee
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFD 106 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~D 106 (118)
.||=||||.+-++.+..-+....+++++|
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~ 31 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMG 31 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEe
Confidence 47779999988888877666788888776
No 406
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=42.85 E-value=16 Score=26.19 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=23.1
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.+..-+-...+++|+|.-
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCC
Confidence 4677999988777765544457899999863
No 407
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=42.81 E-value=20 Score=24.52 Aligned_cols=31 Identities=6% Similarity=0.126 Sum_probs=24.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||.+-++.+..-+....+++++|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 36 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITG 36 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEcc
Confidence 3578899998887777666656788889884
No 408
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=42.68 E-value=9.4 Score=25.12 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=24.3
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 83 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR 116 (169)
T 3ph3_A 83 VICGTGLGISIAANKVPGIRAAVCTNSYMARMSR 116 (169)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHH
T ss_pred EEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHH
Confidence 4567887777788999999986555466555544
No 409
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=42.62 E-value=25 Score=26.89 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=24.4
Q ss_pred ceEEEecCCCcHHHHHHHHH-CCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISK-YPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~-~P~l~~~v~Dl 107 (118)
..||=||||.+-++.+..-+ ..+++++++|.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~ 40 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDK 40 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEEC
Confidence 35888999988777776555 67889999986
No 410
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=42.53 E-value=18 Score=27.74 Aligned_cols=32 Identities=13% Similarity=0.260 Sum_probs=24.6
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||.+-++.+..-+.++++++++|.-
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~ 41 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAG 41 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45888999988777665555578899999963
No 411
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=42.47 E-value=21 Score=26.98 Aligned_cols=45 Identities=24% Similarity=0.379 Sum_probs=29.5
Q ss_pred HHHHhcCCCCCCceEEEecCCCcH-----HHHHHHHHCCCCc---EEEeechH
Q 043449 65 KFLENYKGFEGLKSVVDVGGGIGA-----SLNMIISKYPSIK---GINFDLPH 109 (118)
Q Consensus 65 ~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~---~~v~Dlp~ 109 (118)
..++..|.+.++..+-.+|||+|. ++..|...||... ..|+=-|.
T Consensus 122 k~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~ey~kk~~~~~sV~Psp~ 174 (445)
T 3ryc_B 122 KESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPK 174 (445)
T ss_dssp HHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHHCTTSEEEEEEEECCGG
T ss_pred HHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHHcCccccceEEEEeCCc
Confidence 345555645677889999999985 4445777899843 33444444
No 412
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=42.27 E-value=19 Score=24.50 Aligned_cols=31 Identities=13% Similarity=0.227 Sum_probs=23.1
Q ss_pred eEEEecCCCcHHHHHHHHHCCCC-cEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSI-KGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l-~~~v~Dlp 108 (118)
.|+=||||.+-++.++.-+.... +++++|..
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 47779999888777765444577 89999863
No 413
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=41.93 E-value=19 Score=24.80 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=23.1
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-++.+..-+.-+++++++|.-
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSCCEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4777999987776665555457899999853
No 414
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=41.65 E-value=20 Score=26.70 Aligned_cols=30 Identities=23% Similarity=0.259 Sum_probs=25.0
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.||=||||.+-++.++.-+-...+++++|.
T Consensus 8 dVvIIGaG~aGl~aA~~l~~~G~~V~liE~ 37 (482)
T 1ojt_A 8 DVVVLGGGPGGYSAAFAAADEGLKVAIVER 37 (482)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 478899999888887766667899999997
No 415
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=41.32 E-value=20 Score=26.45 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=24.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..++.-+..+.+++++|..
T Consensus 4 dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 34 (468)
T 2qae_A 4 DVVVIGGGPGGYVASIKAAQLGMKTACVEKR 34 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4778999998887776655568899999864
No 416
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=40.93 E-value=28 Score=22.21 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=25.2
Q ss_pred CCCCceEEEec--CCCcHHHHHHHHHCCCCcEEEeech
Q 043449 73 FEGLKSVVDVG--GGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 73 ~~~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.....+|+.+| ||.|..+..++++. ..++++.|..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~ 72 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGS 72 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESS
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCC
Confidence 55667899898 46777777777765 3577777763
No 417
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=40.90 E-value=21 Score=25.01 Aligned_cols=32 Identities=22% Similarity=0.106 Sum_probs=22.2
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCC-cEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSI-KGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l-~~~v~Dlp 108 (118)
..|+=||||.+-++.+..-+--.. +++++|..
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~ 37 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKG 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecC
Confidence 358889999877666644333455 89999864
No 418
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=40.84 E-value=10 Score=27.28 Aligned_cols=10 Identities=40% Similarity=0.597 Sum_probs=8.5
Q ss_pred ceEEEecCCC
Q 043449 77 KSVVDVGGGI 86 (118)
Q Consensus 77 ~~vvDvGGg~ 86 (118)
..|+|||||+
T Consensus 192 vlVvDIGgGT 201 (346)
T 2fsj_A 192 GVVIDVGSRT 201 (346)
T ss_dssp EEEEEECSSC
T ss_pred EEEEECCCCc
Confidence 3799999985
No 419
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=40.78 E-value=19 Score=26.81 Aligned_cols=29 Identities=14% Similarity=0.181 Sum_probs=23.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEee
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFD 106 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~D 106 (118)
.|+=||||.+-+..++.-+--..+++++|
T Consensus 11 DvvVIGgG~aGl~aA~~la~~G~~V~liE 39 (483)
T 3dgh_A 11 DLIVIGGGSAGLACAKEAVLNGARVACLD 39 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 47779999998888766665688999998
No 420
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=40.45 E-value=29 Score=25.38 Aligned_cols=33 Identities=9% Similarity=0.106 Sum_probs=25.0
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCC--cEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSI--KGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l--~~~v~Dlp 108 (118)
...|+=||||..-++.+..-+.-.+ +++++|.-
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~ 40 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 40 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC
Confidence 3568889999887777766555566 99999964
No 421
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=40.14 E-value=23 Score=24.76 Aligned_cols=32 Identities=9% Similarity=0.068 Sum_probs=24.8
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
...||=||||..-++.++.-+ ...+++|+|.-
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~ 40 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLERE 40 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECC
Confidence 456888999987777776555 58999999974
No 422
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=39.96 E-value=22 Score=26.34 Aligned_cols=31 Identities=16% Similarity=0.231 Sum_probs=24.1
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+..-+..+.+++++|..
T Consensus 8 dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~ 38 (464)
T 2eq6_A 8 DLIVIGTGPGGYHAAIRAAQLGLKVLAVEAG 38 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4788999998877776555557899999954
No 423
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=39.91 E-value=62 Score=19.75 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=23.5
Q ss_pred CceEEEecCC-CcHHHHHHHHHCCCCcEEEeec-hHHhhhCC
Q 043449 76 LKSVVDVGGG-IGASLNMIISKYPSIKGINFDL-PHVIQDAP 115 (118)
Q Consensus 76 ~~~vvDvGGg-~G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a~ 115 (118)
..+|+=+|+| .|......+++. +.++++.|. |+.++.++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~ 59 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLN 59 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSC
T ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHH
Confidence 4567778764 354444445444 358888887 55555544
No 424
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=39.86 E-value=17 Score=25.06 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=22.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||.+-++.+..-+.-.++++++|.
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 3578899998777666554445788899886
No 425
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=39.81 E-value=17 Score=26.61 Aligned_cols=31 Identities=13% Similarity=0.074 Sum_probs=24.9
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||..-++.++.-+.-.++++|+|.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 4588899998887777666666899999985
No 426
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=39.81 E-value=20 Score=26.36 Aligned_cols=29 Identities=14% Similarity=0.072 Sum_probs=21.0
Q ss_pred EEEecCCCcHHHHH-HHHHCCCCcEEEeec
Q 043449 79 VVDVGGGIGASLNM-IISKYPSIKGINFDL 107 (118)
Q Consensus 79 vvDvGGg~G~~~~~-l~~~~P~l~~~v~Dl 107 (118)
||=||||..-++.| .+.+....+++|++-
T Consensus 13 VvIIGaGisGLsaA~~L~k~~G~~V~VlE~ 42 (513)
T 4gde_A 13 VLVIGAGPTGLGAAKRLNQIDGPSWMIVDS 42 (513)
T ss_dssp EEEECCSHHHHHHHHHHHHHCCSCEEEEES
T ss_pred EEEECCcHHHHHHHHHHHhhCCCCEEEEEC
Confidence 77799997776666 344445788888885
No 427
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=39.79 E-value=11 Score=24.32 Aligned_cols=34 Identities=9% Similarity=0.123 Sum_probs=23.8
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+.||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 69 liCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar 102 (148)
T 4em8_A 69 LICGTGIGMSIAANRHKNIRAALCSSTMLAKLSR 102 (148)
T ss_dssp EEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHH
T ss_pred EEccCcHHHHHHHhcCCCeEEEEeCCHHHHHHHH
Confidence 4467887777788999999986554455555443
No 428
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=39.69 E-value=65 Score=22.89 Aligned_cols=34 Identities=21% Similarity=0.102 Sum_probs=27.5
Q ss_pred CCCCceEEEec--CCCcHHHHHHHHHCCCCcEEEeec
Q 043449 73 FEGLKSVVDVG--GGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 73 ~~~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.....+|+-+| ||.|..+..+++.. ..++++.|.
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~ 196 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCS 196 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEEC
Confidence 55567788888 78999999999987 458888876
No 429
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=39.60 E-value=20 Score=26.53 Aligned_cols=29 Identities=17% Similarity=0.092 Sum_probs=23.5
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEee
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFD 106 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~D 106 (118)
.|+=||||.+-++.+..-+--..+++++|
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liE 34 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMAD 34 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 37779999988887766655688999999
No 430
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=39.57 E-value=22 Score=26.40 Aligned_cols=32 Identities=9% Similarity=0.128 Sum_probs=23.9
Q ss_pred ceEEEecCCCcHHHHHHHHHC---CCCc---EEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKY---PSIK---GINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~---P~l~---~~v~Dlp 108 (118)
..|+=||||.+-++.+..-+- .+++ ++++|.-
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Confidence 358889999887777655544 6777 9999863
No 431
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=39.48 E-value=26 Score=26.37 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=26.1
Q ss_pred CCCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 74 EGLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 74 ~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.....|+=||||..-++.++.-+...++++|+|.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 42 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLER 42 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 3345588899998877777666666899999996
No 432
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=39.47 E-value=20 Score=27.10 Aligned_cols=30 Identities=20% Similarity=0.266 Sum_probs=24.4
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.|+=||||.+-+..++.-+--.++++++|.
T Consensus 34 DVvVIGgGpaGl~aA~~la~~G~~V~liEk 63 (519)
T 3qfa_A 34 DLIIIGGGSGGLAAAKEAAQYGKKVMVLDF 63 (519)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEec
Confidence 477899999988877666656889999985
No 433
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=39.45 E-value=29 Score=25.60 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=25.4
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+-||||.+-++.+..-+..+.+++|+|.-
T Consensus 14 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~ 45 (504)
T 1sez_A 14 KRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE 45 (504)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEeC
Confidence 46888999988888876666667899998854
No 434
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=39.35 E-value=14 Score=24.60 Aligned_cols=34 Identities=12% Similarity=0.202 Sum_probs=24.0
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+-||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 87 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR 120 (179)
T 3k7p_A 87 LAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSR 120 (179)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHH
T ss_pred EEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHH
Confidence 4457777777788999999986554466555544
No 435
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=39.16 E-value=22 Score=24.93 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=22.2
Q ss_pred eEEEecCCCc-H-HHHHHHHHC----CCCcEEEeechH
Q 043449 78 SVVDVGGGIG-A-SLNMIISKY----PSIKGINFDLPH 109 (118)
Q Consensus 78 ~vvDvGGg~G-~-~~~~l~~~~----P~l~~~v~Dlp~ 109 (118)
.||=||||.- . .+..++++. |+.+++|+|.-.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 3677999954 3 334566665 789999999643
No 436
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=38.93 E-value=22 Score=27.27 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=24.5
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..||=||||.+-++.+..-+.++++++++|.
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~ 52 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEA 52 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeC
Confidence 4688899998877777655557889999996
No 437
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=38.88 E-value=15 Score=24.96 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=23.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEE-eech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGIN-FDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v-~Dlp 108 (118)
..||=||||.+-++.+..-+-...++++ +|.+
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~ 37 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG 37 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 4688899998887777555445778888 8863
No 438
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=38.82 E-value=19 Score=25.90 Aligned_cols=30 Identities=17% Similarity=0.110 Sum_probs=21.8
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.||=||||.+-++.+..-+--..+++|+|.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~ 32 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEG 32 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 367799998777666544444789999985
No 439
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=38.66 E-value=16 Score=26.98 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=23.5
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
|+=||||.+-++.++.-+--..+++++|..
T Consensus 6 VvVIGgG~aGl~aA~~la~~G~~V~liEk~ 35 (476)
T 3lad_A 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY 35 (476)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 677999999887776555557899999963
No 440
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=38.58 E-value=28 Score=27.18 Aligned_cols=31 Identities=16% Similarity=0.190 Sum_probs=25.8
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..||=||||..-++.++.-+--..+++|+|.
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCA 303 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4688899998888877776667899999997
No 441
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=38.56 E-value=25 Score=27.35 Aligned_cols=31 Identities=19% Similarity=0.107 Sum_probs=26.1
Q ss_pred ceEEEecCCCcHHHHHHHHHC-CCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKY-PSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~-P~l~~~v~Dl 107 (118)
..||=||||..-++.++.-+. .+++++|+|.
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr 64 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQ 64 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeC
Confidence 358889999888888877777 8999999996
No 442
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=38.55 E-value=28 Score=27.30 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=25.7
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..||=||||..-++.++.-+--..+++|+|.
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk 295 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCA 295 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeC
Confidence 3588899998888888776667899999997
No 443
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=38.41 E-value=22 Score=24.44 Aligned_cols=31 Identities=16% Similarity=0.103 Sum_probs=22.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||..-++.++.-+.-.++++|+|.-
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 4778999976666655444457899999963
No 444
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=38.37 E-value=48 Score=23.90 Aligned_cols=46 Identities=15% Similarity=-0.039 Sum_probs=31.1
Q ss_pred HhcCCCCCCceEEEecCCC-cHHHHHHHHHCCCCcEEEeec-hHHhhhC
Q 043449 68 ENYKGFEGLKSVVDVGGGI-GASLNMIISKYPSIKGINFDL-PHVIQDA 114 (118)
Q Consensus 68 ~~~~~~~~~~~vvDvGGg~-G~~~~~l~~~~P~l~~~v~Dl-p~vi~~a 114 (118)
+..+ .....+|+-+|+|. |.++..+++..-.-++++.|. ++-++.+
T Consensus 179 ~~~~-~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 226 (398)
T 2dph_A 179 VSAG-VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLL 226 (398)
T ss_dssp HHTT-CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred HHcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 3344 55567788888764 899999999874337888884 5444443
No 445
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=38.29 E-value=23 Score=25.22 Aligned_cols=32 Identities=19% Similarity=0.099 Sum_probs=23.6
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.||=||||..-++.++.-+--.++++|+|...
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 47779999777666655444588999999744
No 446
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=38.21 E-value=26 Score=23.21 Aligned_cols=31 Identities=13% Similarity=0.102 Sum_probs=22.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||..-+..++.-+.-.++++++|.-
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 3777999987666665555558899998863
No 447
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=38.06 E-value=28 Score=26.71 Aligned_cols=28 Identities=25% Similarity=0.329 Sum_probs=25.3
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEee
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFD 106 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~D 106 (118)
||=||||.|-+..++..+--..+++++|
T Consensus 45 viVIG~GpaG~~aA~~aa~~G~kValIE 72 (542)
T 4b1b_A 45 YVVIGGGPGGMASAKEAAAHGARVLLFD 72 (542)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 6779999999999998888899999888
No 448
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=38.04 E-value=28 Score=25.47 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=25.2
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
...|+=||||.+-++.+..-+.-+.+++|+|.-
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~ 48 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESS 48 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 356888999988887776666667899998864
No 449
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=38.04 E-value=22 Score=25.94 Aligned_cols=30 Identities=13% Similarity=0.017 Sum_probs=23.4
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
|+=||||..-+..++.-+....+++|+|.-
T Consensus 7 ViIIGgG~aGl~aA~~la~~G~~V~vlEk~ 36 (401)
T 2gqf_A 7 NIIIGAGAAGLFCAAQLAKLGKSVTVFDNG 36 (401)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECCcHHHHHHHHHHHhCCCCEEEEeCC
Confidence 677999987777776665568899999963
No 450
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=38.00 E-value=33 Score=25.51 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=23.6
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
..||=||||.+.+..+ +++..|+.+++++|.
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~ 39 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEK 39 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred ceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 5688899997765443 566677899999986
No 451
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=37.89 E-value=23 Score=24.99 Aligned_cols=32 Identities=19% Similarity=0.088 Sum_probs=22.9
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.||=||||..-++.++.-+-...+++|+|...
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 47779999776666654444578999999644
No 452
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=37.81 E-value=19 Score=25.85 Aligned_cols=38 Identities=21% Similarity=0.339 Sum_probs=28.2
Q ss_pred CCceEEEec--CCCcHHHHHHHHHCCCCcEEEeec-hHHhh
Q 043449 75 GLKSVVDVG--GGIGASLNMIISKYPSIKGINFDL-PHVIQ 112 (118)
Q Consensus 75 ~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~ 112 (118)
...+|+=+| |+.|.+++.+++.....++++.|. ++-++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~ 211 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQE 211 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 345677676 678999999999877788888887 44443
No 453
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=37.79 E-value=23 Score=26.21 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=24.2
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||.+-+..++.-+--..+++++|..
T Consensus 22 dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 22 DYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4777999998887776555558899999854
No 454
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=37.69 E-value=30 Score=26.48 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=25.7
Q ss_pred EEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 79 VVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 79 vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
||=||||..-++.++.-+--.++++|+|.-
T Consensus 21 VvVIGgGi~Gl~~A~~La~~G~~V~LlEk~ 50 (561)
T 3da1_A 21 LLVIGGGITGAGIALDAQVRGIQTGLVEMN 50 (561)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHhCCCcEEEEECC
Confidence 777999998888888777779999999875
No 455
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=37.59 E-value=30 Score=25.31 Aligned_cols=31 Identities=26% Similarity=0.375 Sum_probs=23.5
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
..|+=||||..-++.+ |.++.|+.+++|+|.
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~ 37 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEA 37 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEEC
Confidence 4578899997665544 566677799999986
No 456
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=37.41 E-value=45 Score=23.61 Aligned_cols=33 Identities=27% Similarity=0.229 Sum_probs=28.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
....|+|-=+|+|+.+.+..+. +-+++..|+.+
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~ 284 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKP 284 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCH
Confidence 3568999999999999998877 57899999854
No 457
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=37.40 E-value=23 Score=26.11 Aligned_cols=31 Identities=19% Similarity=0.215 Sum_probs=23.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.|+=||||..-++.++.-+--..+++|+|.-
T Consensus 29 dViIIGgG~AGl~aA~~La~~G~~V~llEk~ 59 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRGRRVLVIDHA 59 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3777999987766666555558899999963
No 458
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=37.29 E-value=30 Score=24.97 Aligned_cols=31 Identities=10% Similarity=-0.070 Sum_probs=22.8
Q ss_pred ceEEEecCCCcHHHHH--HHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNM--IISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~--l~~~~P~l~~~v~Dl 107 (118)
.+||=||||.+-++.+ |+++.++.+++++|.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~ 34 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALIND 34 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeC
Confidence 4588899998765544 666666678998885
No 459
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=37.21 E-value=24 Score=26.51 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=25.9
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
....|+=||||..-++.++.-+...++++|+|.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~ 43 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQ 43 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 345688899998877777666666899999996
No 460
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=37.06 E-value=7.2 Score=28.43 Aligned_cols=26 Identities=27% Similarity=0.261 Sum_probs=16.0
Q ss_pred ceEEEecCCCcH--HHHHHHHHCCCCcE
Q 043449 77 KSVVDVGGGIGA--SLNMIISKYPSIKG 102 (118)
Q Consensus 77 ~~vvDvGGg~G~--~~~~l~~~~P~l~~ 102 (118)
.+||=+|||+|. ++.+|.+...++.+
T Consensus 5 ~kIv~lgGGtGl~~ll~gLk~~~~~iTa 32 (332)
T 2ppv_A 5 MNVVLIGGGTGLSVLARGLREFPIDITA 32 (332)
T ss_dssp EEEEEEECHHHHHHHHHHHTTSSEEEEE
T ss_pred CeEEEEcCcccHHHHHHHHHhCCCCeEE
Confidence 578889999884 44455443334443
No 461
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=36.94 E-value=25 Score=25.91 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=24.3
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-++.++.-+.-+.+++++|..
T Consensus 5 dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 5 DVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4788999998877776655558899999964
No 462
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=36.90 E-value=26 Score=25.89 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=23.6
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.||=||||.+-++.++.-+.-+.+++++|.
T Consensus 7 dVvIIGgG~aGl~aA~~l~~~G~~V~liE~ 36 (478)
T 1v59_A 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEK 36 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 478899998887777655545789999997
No 463
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=36.80 E-value=26 Score=25.71 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=23.8
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+..-+.-..+++++|..
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 33 (455)
T 2yqu_A 3 DLLVIGAGPGGYVAAIRAAQLGMKVGVVEKE 33 (455)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCChhHHHHHHHHHHCCCeEEEEeCC
Confidence 4777999998877776555457899999864
No 464
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=36.80 E-value=26 Score=25.88 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=24.2
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||.+-+..+..-+.-+.+++++|..
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 38 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKN 38 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35788999998877775554447899999864
No 465
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=36.59 E-value=26 Score=25.47 Aligned_cols=31 Identities=13% Similarity=0.119 Sum_probs=22.6
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||.+-++.+..-+..+.+++|+|.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~ 36 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEA 36 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEEC
Confidence 3578899998777766544444788999885
No 466
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=36.58 E-value=18 Score=26.78 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=24.2
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+..-+..+.+++++|.+
T Consensus 7 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4788999999887776555557899999973
No 467
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=36.43 E-value=24 Score=26.28 Aligned_cols=30 Identities=20% Similarity=0.148 Sum_probs=23.7
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
-|+=||||.+-+..++.-+--.++++++|.
T Consensus 8 DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 8 DLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 377799999988877666555789999984
No 468
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=36.43 E-value=31 Score=25.88 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=25.0
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
...|+=||||..-+..++.-+..+++++|+|.-
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~ 124 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKR 124 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEec
Confidence 456888999987777766555558899999863
No 469
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=36.31 E-value=33 Score=25.78 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=25.4
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||||..-++.++.-+.-.++++|+|.-
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~ 37 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERR 37 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 35788999988777776666668999999964
No 470
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=36.25 E-value=33 Score=21.38 Aligned_cols=30 Identities=23% Similarity=0.293 Sum_probs=20.2
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.|+=||||...+..+..-+.-..+++++|.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~ 32 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDG 32 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 477799997555444433334778999886
No 471
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=36.16 E-value=16 Score=24.33 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=23.7
Q ss_pred ecCCCcHHHHHHHHHCCCCcEEEeechHHhhhCC
Q 043449 82 VGGGIGASLNMIISKYPSIKGINFDLPHVIQDAP 115 (118)
Q Consensus 82 vGGg~G~~~~~l~~~~P~l~~~v~Dlp~vi~~a~ 115 (118)
+-||+|.=..-.+.++|.+|+.+.--|.....++
T Consensus 95 liCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR 128 (184)
T 3sgw_A 95 MICGTGLGVAISANKVPGIRAVTAHDTFSVERAI 128 (184)
T ss_dssp EEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHH
T ss_pred EEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHH
Confidence 4456777777778999999986554465555544
No 472
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=35.84 E-value=26 Score=25.74 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=24.0
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||.+-+..+..-+.-+.+++++|..
T Consensus 5 dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4777999998877776555557899999964
No 473
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=35.78 E-value=32 Score=25.22 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=25.0
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..|+=||+|.+.++.+..-+..+.+++++|.-
T Consensus 7 ~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~ 38 (433)
T 1d5t_A 7 YDVIVLGTGLTECILSGIMSVNGKKVLHMDRN 38 (433)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence 35777999988888777666678899999853
No 474
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=35.15 E-value=12 Score=27.28 Aligned_cols=13 Identities=31% Similarity=0.419 Sum_probs=10.1
Q ss_pred CceEEEecCCCcH
Q 043449 76 LKSVVDVGGGIGA 88 (118)
Q Consensus 76 ~~~vvDvGGg~G~ 88 (118)
...++|||||+=.
T Consensus 141 t~~v~DiGGGSte 153 (353)
T 3aap_A 141 SVGVMDMGGASVQ 153 (353)
T ss_dssp CEEEEEECSSEEE
T ss_pred cEEEEEeCCCceE
Confidence 3689999998543
No 475
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=34.82 E-value=26 Score=27.78 Aligned_cols=31 Identities=13% Similarity=0.177 Sum_probs=25.7
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.-||=||||.+-+..++.-+...++++++|.
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk 59 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTH 59 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEee
Confidence 3477799999888888777777899999986
No 476
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=34.32 E-value=35 Score=24.38 Aligned_cols=32 Identities=22% Similarity=-0.001 Sum_probs=23.4
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
...||=||||.+-+..+..-+.-. +++++|..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~ 39 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKE 39 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECC
Confidence 356888999998887776555445 99998853
No 477
>3mt1_A Putative carboxynorspermidine decarboxylase prote; PSI2, MCSG, structural genomics; 2.50A {Sinorhizobium meliloti}
Probab=34.06 E-value=14 Score=26.77 Aligned_cols=12 Identities=42% Similarity=0.612 Sum_probs=10.2
Q ss_pred ceEEEecCCCcH
Q 043449 77 KSVVDVGGGIGA 88 (118)
Q Consensus 77 ~~vvDvGGg~G~ 88 (118)
-.++|||||-|.
T Consensus 191 ~~~ldiGGG~~i 202 (365)
T 3mt1_A 191 VDWVSLGGGIHF 202 (365)
T ss_dssp SSEEECCSCCCT
T ss_pred CCEEEeCCCcCC
Confidence 569999999875
No 478
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=34.05 E-value=16 Score=24.71 Aligned_cols=11 Identities=55% Similarity=0.815 Sum_probs=9.1
Q ss_pred CceEEEecCCC
Q 043449 76 LKSVVDVGGGI 86 (118)
Q Consensus 76 ~~~vvDvGGg~ 86 (118)
...|+|+|||+
T Consensus 140 ~~~viDiGggs 150 (272)
T 3h1q_A 140 DGIVVDIGGGT 150 (272)
T ss_dssp SEEEEEECSSC
T ss_pred CEEEEEECCCc
Confidence 36899999985
No 479
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=34.02 E-value=32 Score=24.11 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=28.6
Q ss_pred CCCCceEEEec--CCCcHHHHHHHHHCCCCcEEEeec-hHHhh
Q 043449 73 FEGLKSVVDVG--GGIGASLNMIISKYPSIKGINFDL-PHVIQ 112 (118)
Q Consensus 73 ~~~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dl-p~vi~ 112 (118)
.....+|+-+| ||.|..+..+++..- .++++.|. ++-++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~~~~~ 187 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTDEKLK 187 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHH
Confidence 55567788888 578889999998864 58888887 54443
No 480
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=33.80 E-value=1.2e+02 Score=21.07 Aligned_cols=36 Identities=14% Similarity=0.017 Sum_probs=27.7
Q ss_pred CCCCceEEEec--CCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 73 FEGLKSVVDVG--GGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 73 ~~~~~~vvDvG--Gg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
.....+|+-+| ||.|..+..+++... .++++.|..+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~ 180 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTE 180 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence 55567788888 689999999998875 5888888643
No 481
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=33.65 E-value=26 Score=26.15 Aligned_cols=33 Identities=15% Similarity=-0.059 Sum_probs=23.8
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
...|+=||||.+-++.+..-+.-..+++++|..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 457899999988776664433336789999863
No 482
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=33.61 E-value=35 Score=24.51 Aligned_cols=31 Identities=6% Similarity=0.010 Sum_probs=21.7
Q ss_pred ceEEEecCCCcHHHHHHHHHCCC-CcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPS-IKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~-l~~~v~Dl 107 (118)
..|+=||||.+-++.+..-+.-+ .+++|++.
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~ 38 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQAGFHDYTILER 38 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEEC
Confidence 45788999987776664433335 78888875
No 483
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=33.39 E-value=83 Score=22.47 Aligned_cols=43 Identities=19% Similarity=0.130 Sum_probs=25.1
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcH--HHHHHHHHCCCCcEEEeec
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGA--SLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~--~~~~l~~~~P~l~~~v~Dl 107 (118)
..+.+..+ ..-...|+=+|||--. .+..+.+.+|+++++..+-
T Consensus 183 ~EI~eq~~-~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep 227 (344)
T 3vc3_A 183 PEIWEDTN-GQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEP 227 (344)
T ss_dssp HHHHHHTT-TCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHhC-CCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcC
Confidence 34555554 3333445555554222 2345777899999988874
No 484
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=33.32 E-value=69 Score=23.58 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=26.3
Q ss_pred HHHHHhcCCCCCCceEEEecCCCcH-----HHHHHHHHCCCCcEE
Q 043449 64 KKFLENYKGFEGLKSVVDVGGGIGA-----SLNMIISKYPSIKGI 103 (118)
Q Consensus 64 ~~~~~~~~~~~~~~~vvDvGGg~G~-----~~~~l~~~~P~l~~~ 103 (118)
...++.+++...+-.+.-+|||+|+ ++..+...||.....
T Consensus 80 r~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~~k~v~ 124 (360)
T 3v3t_A 80 AQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYPNKHFG 124 (360)
T ss_dssp HHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCCCCeEE
Confidence 3445545545567778899999887 345566778874443
No 485
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=33.19 E-value=29 Score=25.50 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=22.8
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||..-++.++.-+-..++++|+|..
T Consensus 28 dVvIIGgG~aGl~aA~~la~~G~~V~llEk~ 58 (447)
T 2i0z_A 28 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKG 58 (447)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHCCCCEEEEECC
Confidence 3777999977666666555557899999963
No 486
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=33.03 E-value=28 Score=25.63 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=23.9
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||.+-+..+..-+....+++++|..
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~ 38 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR 38 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35788999998877665544447899999864
No 487
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=33.02 E-value=30 Score=26.44 Aligned_cols=32 Identities=19% Similarity=0.144 Sum_probs=25.2
Q ss_pred CceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 76 LKSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 76 ~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
...|+=||||.+-++.+..-+--..+++++|.
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 45688899999988877665555789999984
No 488
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=32.57 E-value=17 Score=26.19 Aligned_cols=10 Identities=40% Similarity=0.836 Sum_probs=8.5
Q ss_pred ceEEEecCCC
Q 043449 77 KSVVDVGGGI 86 (118)
Q Consensus 77 ~~vvDvGGg~ 86 (118)
..|+|+|||+
T Consensus 216 vlV~D~GgGT 225 (404)
T 3i33_A 216 VLIFDLGGGT 225 (404)
T ss_dssp EEEEEECSSC
T ss_pred EEEEECCCCc
Confidence 4799999985
No 489
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=32.51 E-value=31 Score=26.25 Aligned_cols=31 Identities=13% Similarity=0.087 Sum_probs=24.2
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+=||||..-++.++.-+...++++|+|.
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr 57 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQ 57 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeC
Confidence 3588899998777777665556899999996
No 490
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=32.45 E-value=38 Score=24.88 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=25.0
Q ss_pred CCceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 75 GLKSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
....|+=||||..-++.+..-+..+.+++|+|.-
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~ 43 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEAR 43 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecc
Confidence 3457888999988777775555556789998853
No 491
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=32.41 E-value=30 Score=26.40 Aligned_cols=31 Identities=26% Similarity=0.159 Sum_probs=25.1
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
.||=||||..-++.++.-+-..++++|+|.-
T Consensus 128 DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~ 158 (571)
T 1y0p_A 128 DVVVVGSGGAGFSAAISATDSGAKVILIEKE 158 (571)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4777999988888887776678899999864
No 492
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=32.02 E-value=30 Score=26.81 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=24.1
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeech
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDLP 108 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp 108 (118)
..||=||||..-++.++.-+.-.++++|+|..
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHcCCCCEEEEcCC
Confidence 46888999987766665544457899999975
No 493
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=32.01 E-value=33 Score=25.30 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=23.0
Q ss_pred ceEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 77 KSVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 77 ~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
..|+-||||.+-++.+..-+..+.+++|+|.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~ 70 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEA 70 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeC
Confidence 4688899998777776544445678988885
No 494
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=31.94 E-value=35 Score=24.44 Aligned_cols=30 Identities=17% Similarity=0.072 Sum_probs=22.2
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
.|+=||||.+-++.+..-+..+.+++|+|.
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~ 32 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEK 32 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEec
Confidence 467799998877777555545788999886
No 495
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=31.86 E-value=18 Score=25.87 Aligned_cols=10 Identities=50% Similarity=0.803 Sum_probs=8.3
Q ss_pred ceEEEecCCC
Q 043449 77 KSVVDVGGGI 86 (118)
Q Consensus 77 ~~vvDvGGg~ 86 (118)
..|+|+|||+
T Consensus 208 vlV~D~Gggt 217 (394)
T 3qfu_A 208 IIVYDLGGGT 217 (394)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEcCCCc
Confidence 3799999985
No 496
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=31.82 E-value=29 Score=26.04 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=27.2
Q ss_pred CCCCceEEEecCCCcHHHHHHHHHCCCCcEEEeechH
Q 043449 73 FEGLKSVVDVGGGIGASLNMIISKYPSIKGINFDLPH 109 (118)
Q Consensus 73 ~~~~~~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dlp~ 109 (118)
|....-||=||+|.+-++.++.-+--.++++|+|.-.
T Consensus 38 ~~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 38 WDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3333447779999888888877666688999998643
No 497
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=31.75 E-value=32 Score=27.25 Aligned_cols=30 Identities=27% Similarity=0.288 Sum_probs=25.0
Q ss_pred eEEEecCCCcHHHHHHHHHCCCCcEEEeec
Q 043449 78 SVVDVGGGIGASLNMIISKYPSIKGINFDL 107 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~~~~P~l~~~v~Dl 107 (118)
-||=||||..-+..++..+.-.++++++|.
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G~kVlLIEk 58 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMGAKTAMFVL 58 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEe
Confidence 377799998888888777777899999986
No 498
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=31.72 E-value=16 Score=23.08 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=27.1
Q ss_pred CCceEEEecCCCcHH-HHHHHHHCCCCcE-EEeechHHhhhC
Q 043449 75 GLKSVVDVGGGIGAS-LNMIISKYPSIKG-INFDLPHVIQDA 114 (118)
Q Consensus 75 ~~~~vvDvGGg~G~~-~~~l~~~~P~l~~-~v~Dlp~vi~~a 114 (118)
+.-.++|+-||+=.. +..+ ...+++++ +...+|-+++.+
T Consensus 63 gvliLtDl~GGSp~n~a~~l-~~~~~v~vItGvNLpMlle~~ 103 (144)
T 3lfh_A 63 EIIIVVDLFGGSPFNIALSM-MKEYDVKVITGINMPMLVELL 103 (144)
T ss_dssp EEEEEESSSSSHHHHHHHHH-HHHHCCEEEESCCHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHH-hcCCCEEEEeCCCHHHHHHHH
Confidence 456789997776544 4445 55677774 888999888754
No 499
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=31.56 E-value=24 Score=27.15 Aligned_cols=31 Identities=16% Similarity=0.058 Sum_probs=22.0
Q ss_pred eEEEecCCCcHHHHHHH--HH----CCCCcEEEeech
Q 043449 78 SVVDVGGGIGASLNMII--SK----YPSIKGINFDLP 108 (118)
Q Consensus 78 ~vvDvGGg~G~~~~~l~--~~----~P~l~~~v~Dlp 108 (118)
.||=||||.+-++.++. ++ .|+++++|+|.-
T Consensus 37 DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~ 73 (584)
T 2gmh_A 37 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 73 (584)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCC
Confidence 37779999876655543 33 348999999964
No 500
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=31.56 E-value=17 Score=26.34 Aligned_cols=11 Identities=36% Similarity=0.634 Sum_probs=9.1
Q ss_pred CceEEEecCCC
Q 043449 76 LKSVVDVGGGI 86 (118)
Q Consensus 76 ~~~vvDvGGg~ 86 (118)
...|+|+|||+
T Consensus 206 ~vlv~D~GgGT 216 (409)
T 4gni_A 206 IIVVADLGGSR 216 (409)
T ss_dssp EEEEEEECSSC
T ss_pred EEEEEECCCCc
Confidence 46799999985
Done!