Query 043453
Match_columns 134
No_of_seqs 111 out of 349
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 08:32:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043453.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043453hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gdc_A Multicopper oxidase; be 77.1 3 0.0001 32.0 4.5 56 31-87 76-136 (288)
2 3g5w_A Multicopper oxidase typ 72.4 7.4 0.00025 30.3 5.8 56 31-87 44-107 (318)
3 2ov0_A Amicyanin; beta-sandwic 69.9 5 0.00017 25.9 3.7 54 30-86 40-94 (105)
4 3cvb_A Plastocyanin; cupredoxi 68.9 13 0.00045 23.3 5.5 56 30-86 26-91 (105)
5 2zoo_A Probable nitrite reduct 62.6 8.4 0.00029 31.0 4.4 56 31-86 70-127 (442)
6 1hfu_A Laccase 1; oxidoreducta 62.0 13 0.00045 30.6 5.6 68 30-98 43-129 (503)
7 2dv6_A Nitrite reductase; elec 61.6 7.3 0.00025 31.3 3.8 53 31-87 65-117 (447)
8 2gim_A Plastocyanin; beta shee 61.3 15 0.0005 23.2 4.7 55 30-85 27-91 (106)
9 2xu9_A Laccase; oxidoreductase 60.8 16 0.00056 29.4 5.8 55 31-86 57-115 (439)
10 1aoz_A Ascorbate oxidase; oxid 57.8 29 0.001 28.8 7.0 68 31-98 44-124 (552)
11 1v10_A Laccase; multicopper bl 57.6 15 0.0005 30.5 5.1 67 31-98 65-150 (521)
12 1oe1_A Dissimilatory copper-co 56.4 11 0.00037 29.2 3.9 56 31-86 75-132 (336)
13 1iby_A Nitrosocyanin; RED copp 55.4 19 0.00065 23.1 4.4 48 32-86 49-97 (112)
14 3c75_A Amicyanin; copper prote 54.6 14 0.00049 24.8 3.9 24 61-86 98-121 (132)
15 1kbv_A ANIA, major outer membr 53.9 10 0.00035 29.4 3.4 55 31-86 80-137 (327)
16 2q9o_A Laccase-1; multicopper 52.9 27 0.00091 29.3 6.0 58 31-88 77-143 (559)
17 2zwn_A Two-domain type laccase 51.8 28 0.00096 27.0 5.6 58 30-88 44-109 (339)
18 3abg_A Bilirubin oxidase; clea 51.6 27 0.00093 29.1 5.8 57 31-88 79-139 (534)
19 1kdj_A Plastocyanin; electron 49.1 18 0.00061 22.6 3.5 51 31-86 25-89 (102)
20 2bw4_A Copper-containing nitri 48.5 18 0.00062 27.9 4.0 56 31-86 81-138 (340)
21 2uxt_A Protein SUFI, SUFI; oxi 48.5 33 0.0011 27.8 5.7 55 31-86 60-118 (451)
22 2plt_A Plastocyanin; electron 47.9 46 0.0016 20.4 5.8 54 30-86 25-85 (98)
23 1b3i_A PETE protein, protein ( 47.8 46 0.0016 20.4 5.3 54 30-86 26-84 (97)
24 3aw5_A Multicopper oxidase; be 47.1 28 0.00097 28.2 5.1 55 30-85 47-105 (448)
25 3pxl_A Laccase; 4-copper prote 46.8 36 0.0012 28.2 5.8 67 31-97 44-128 (499)
26 3t6v_A Laccase; beta barrel, o 46.4 39 0.0013 27.9 5.9 67 31-98 45-130 (495)
27 1plc_A Plastocyanin; electron 46.2 35 0.0012 21.1 4.5 54 30-86 24-86 (99)
28 3sqr_A Laccase; multicopper ox 44.9 49 0.0017 28.1 6.4 57 31-88 108-173 (580)
29 3zx1_A Oxidoreductase, putativ 44.4 33 0.0011 28.4 5.1 55 31-86 92-151 (481)
30 1sdd_A Coagulation factor V; c 43.8 39 0.0013 25.8 5.3 45 30-75 69-127 (306)
31 1zpu_A Iron transport multicop 43.6 44 0.0015 27.8 5.9 57 31-87 44-109 (534)
32 1iuz_A Plastocyanin; electron 41.3 61 0.0021 20.0 5.6 54 30-86 25-85 (98)
33 1id2_A Amicyanin; beta barrel, 37.9 37 0.0013 21.7 3.7 50 30-86 41-95 (106)
34 3kw8_A Laccase, putative coppe 37.8 42 0.0015 25.2 4.5 44 31-75 46-94 (276)
35 3tas_A Small laccase, multi-co 37.6 48 0.0016 25.4 4.9 45 30-75 51-100 (313)
36 1byp_A Protein (plastocyanin); 36.7 72 0.0025 19.5 5.5 54 30-86 24-86 (99)
37 2aan_A Auracyanin A; cupredoxi 36.6 21 0.00073 23.9 2.4 26 61-86 100-125 (139)
38 1cuo_A Protein (azurin ISO-2); 36.6 24 0.00081 23.9 2.6 26 61-86 86-114 (129)
39 3od3_A Blue copper oxidase CUE 34.0 51 0.0018 27.3 4.8 55 31-86 58-116 (488)
40 1xvs_A Protein APAG; MCSG APC2 33.4 74 0.0025 21.6 4.8 45 28-73 29-86 (126)
41 1xq4_A Protein APAG; all beta 33.0 93 0.0032 21.5 5.3 45 28-73 34-91 (139)
42 2f1e_A Protein APAG; APAG prot 31.9 81 0.0028 21.4 4.8 44 28-72 30-86 (127)
43 1pcs_A Plastocyanin; electron 31.8 89 0.003 19.0 5.3 54 30-86 26-85 (98)
44 3t9w_A Small laccase, multi-co 31.6 57 0.002 24.8 4.4 44 31-75 68-116 (299)
45 3gyr_A PHS, phenoxazinone synt 31.4 1.6E+02 0.0056 24.2 7.5 27 60-86 147-174 (612)
46 1paz_A Pseudoazurin precursor; 29.8 89 0.0031 20.6 4.7 52 29-86 27-80 (123)
47 2r7e_B Coagulation factor VIII 29.0 28 0.00095 30.6 2.4 57 31-88 209-281 (770)
48 3ef4_A Pseudoazurin, blue copp 28.2 88 0.003 20.9 4.4 55 29-87 28-82 (124)
49 1tza_A APAG protein, SOR45; st 27.5 84 0.0029 21.6 4.3 45 28-73 29-86 (134)
50 1bxv_A Plastocyanin; copper pr 27.4 1E+02 0.0035 18.3 4.5 51 30-86 26-78 (91)
51 3cg8_A Laccase; oxidoreductase 27.2 72 0.0024 24.8 4.3 43 31-75 87-135 (343)
52 1mzy_A Copper-containing nitri 27.1 59 0.002 24.9 3.8 57 31-87 74-132 (333)
53 2cal_A Rusticyanin; iron respi 26.9 94 0.0032 21.3 4.5 25 61-86 113-139 (154)
54 1pmy_A Pseudoazurin; electron 26.3 90 0.0031 20.6 4.2 51 30-86 28-80 (123)
55 2g23_A PHS, phenoxazinone synt 25.8 2E+02 0.0069 24.4 7.2 29 59-87 146-175 (612)
56 2iaa_C Azurin; quinoprotein, t 25.8 49 0.0017 22.3 2.7 26 61-86 85-113 (128)
57 1nwp_A Azurin; electron transp 25.3 47 0.0016 22.4 2.6 26 61-86 86-114 (128)
58 2dv6_A Nitrite reductase; elec 24.2 87 0.003 24.8 4.4 55 31-86 205-262 (447)
59 2j5w_A Ceruloplasmin, ferroxid 24.2 83 0.0028 28.6 4.6 44 31-75 105-162 (1065)
60 3ay2_A Lipid modified azurin p 23.2 47 0.0016 23.6 2.3 26 61-86 125-152 (167)
61 3lim_A Fragaceatoxin C; pore f 22.1 1.9E+02 0.0065 20.9 5.4 47 29-75 30-77 (178)
62 1gwy_A Sticholysin II; cytolys 21.9 1.8E+02 0.0063 21.0 5.3 47 29-75 29-76 (175)
63 2ccw_A Azurin II, AZN-2; elect 21.7 61 0.0021 21.8 2.6 26 61-86 86-114 (129)
64 3erx_A Pseudoazurin; copper pr 20.9 1.9E+02 0.0064 19.1 5.3 55 29-87 27-81 (123)
65 2ux6_A Pseudoazurin; type-1 co 20.2 1.9E+02 0.0065 18.9 6.0 54 29-86 27-80 (122)
No 1
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=77.08 E-value=3 Score=31.99 Aligned_cols=56 Identities=21% Similarity=0.418 Sum_probs=40.2
Q ss_pred eEEEEEeCCCCCCeeEEEeceeC-CC----CCcceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSK-DD----DVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Sk-d~----DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 87 (134)
..|+++|.| .....+..|--.. .. .+....++||+++.+.|...-.|+-.|.|+..
T Consensus 76 v~v~~~N~~-~~~~~iH~HG~~~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~ 136 (288)
T 3gdc_A 76 LRIHFTNAG-AHPHTIHFHGVHRATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQS 136 (288)
T ss_dssp EEEEEEECS-SSCBCCEESSCCCGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCS
T ss_pred EEEEEEeCC-CCcccEEeccccccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCc
Confidence 458899999 4467788887431 11 12235689999999999976667777889884
No 2
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=72.41 E-value=7.4 Score=30.27 Aligned_cols=56 Identities=20% Similarity=0.365 Sum_probs=40.2
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCC----CC----CcceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKD----DD----VGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd----~D----lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 87 (134)
..|+++|.| .....+..|--... .| +....++||+++.+.|...--|+-.|.|+..
T Consensus 44 v~v~~~N~l-~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~ 107 (318)
T 3g5w_A 44 VTVNVTNMT-TLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVN 107 (318)
T ss_dssp EEEEEEECS-SSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSS
T ss_pred EEEEEEeCC-CCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCC
Confidence 468999999 44677888875321 12 1124689999999999987667777788874
No 3
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=69.95 E-value=5 Score=25.86 Aligned_cols=54 Identities=15% Similarity=0.213 Sum_probs=34.5
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeC-CCCCcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSK-DDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Sk-d~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|+++|.. ...+.+..+=... .+.+....|.||+++++.|.. -|.=.|.|++
T Consensus 40 Gd~V~~~N~d-~~~H~v~~~~~~~g~~~~~~~~~~pG~~~~~tf~~--~G~y~y~C~~ 94 (105)
T 2ov0_A 40 GDTVTWINRE-AMPHNVHFVAGVLGEAALKGPMMKKEQAYSLTFTE--AGTYDYHCTP 94 (105)
T ss_dssp TCEEEEEECS-SSCBCCEECTTTSSSSCEECCCBCTTEEEEEEECS--CEEEEEECSS
T ss_pred CCEEEEEECC-CCCEEEEEcCCCCCcccccccccCCCCEEEEEeCC--CEEEEEEeCC
Confidence 4468999987 4346666542110 001223348899999999954 3777899987
No 4
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=68.88 E-value=13 Score=23.27 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=36.5
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCC-------C--cceecCCCCeEEEEEec-CCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDD-------V--GEHVPSPNQSYSFSFHD-KLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~D-------l--G~~~L~~g~~~~f~F~~-~~~~~T~f~C~f 86 (134)
..+|+++|.. ...+.+.+|=...... + ....+.||+++++.|.. +--|+=.|.|+.
T Consensus 26 Gd~V~~~N~~-~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 26 GDTVKWVNNK-LPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp TEEEEEEECS-SCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred CCEEEEEECC-CCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 3468899997 4467787774221100 0 12367999999999963 335777788983
No 5
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=62.58 E-value=8.4 Score=30.99 Aligned_cols=56 Identities=14% Similarity=0.272 Sum_probs=37.4
Q ss_pred eEEEEEeCCCC-CCeeEEEeceeCCCCC-cceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 31 RVVMITNNTSE-GRFDLTVHCKSKDDDV-GEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~-~~~~L~vhC~Skd~Dl-G~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..|+++|.|+. ....+..|--...|.. ....+.||+++.+.|...--|+-.|.|+.
T Consensus 70 v~v~~~N~l~~~~~~~iH~HG~~~~dG~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~ 127 (442)
T 2zoo_A 70 IEFNLSNHPSSKMPHNIDLHAVTGPGGGAESSFTAPGHTSTFNFKALNPGLYIYHCAT 127 (442)
T ss_dssp EEEEEEECTTCSSCBCCEETTCCSGGGGGGGCCBCTTCEEEEEEECCSCEEEEEECCC
T ss_pred EEEEEEECCCCCCCCCEEecCCcCCCCCCccEEECCCCEEEEEEEcCCCeEEEEecCC
Confidence 35788999842 3567777765432211 11248999999999986556777788953
No 6
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=62.04 E-value=13 Score=30.62 Aligned_cols=68 Identities=18% Similarity=0.237 Sum_probs=44.5
Q ss_pred ceEEEEEeCCCC----CCeeEEEeceeC----CCCCcc-----eecCCCCeEEEEEe-cCCCCceeEEEEeEeC---C--
Q 043453 30 KRVVMITNNTSE----GRFDLTVHCKSK----DDDVGE-----HVPSPNQSYSFSFH-DKLFGQTLFYCSFKWN---N-- 90 (134)
Q Consensus 30 k~~V~I~N~l~~----~~~~L~vhC~Sk----d~DlG~-----~~L~~g~~~~f~F~-~~~~~~T~f~C~f~w~---~-- 90 (134)
...|+++|+|+. ....+..|--.- ..| |. ..++||++|.++|. ..--|+--|.|+...+ |
T Consensus 43 ~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~D-Gv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~ 121 (503)
T 1hfu_A 43 NFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWAD-GADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLR 121 (503)
T ss_dssp CEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGS-CCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCE
T ss_pred EEEEEEEeCCCCccCCCcccEeccceeccCCCccC-CCcccccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcce
Confidence 346999999941 567788887532 123 32 24899999999999 4556776677887432 2
Q ss_pred eEEEEEEe
Q 043453 91 GGLHIYIQ 98 (134)
Q Consensus 91 ~~f~~y~~ 98 (134)
--+.|...
T Consensus 122 G~liV~~~ 129 (503)
T 1hfu_A 122 GPMVIYDD 129 (503)
T ss_dssp EEEEEECT
T ss_pred eeEEEcCC
Confidence 24555543
No 7
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=61.58 E-value=7.3 Score=31.32 Aligned_cols=53 Identities=26% Similarity=0.369 Sum_probs=36.0
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 87 (134)
..|+++|.+ .....|.+|-.. ......+.||+++++.|...--|+..|.|++.
T Consensus 65 v~~~~~N~~-~~~h~~~~~g~~---~~~~~~i~pG~~~~~~f~~~~~Gt~~y~~~~~ 117 (447)
T 2dv6_A 65 VQVNLVNGE-GAQHDVVVDQYA---ARSAIVNGKNASSTFSFVASKVGEFNYYCSIA 117 (447)
T ss_dssp EEEEEECSS-SSCBCCEETTTT---EECCCBCSTTBEEEEEEECCSCEEEEEECCST
T ss_pred EEEEEEcCC-CCceEEEEccCC---cccceecCCCCeEEEEEEcCCCEEEEEEeCCC
Confidence 356799999 334667665321 11234579999999999755468888999973
No 8
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=61.34 E-value=15 Score=23.16 Aligned_cols=55 Identities=24% Similarity=0.312 Sum_probs=34.8
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCCCc---------ceecCCCCeEEEEEec-CCCCceeEEEE
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDDVG---------EHVPSPNQSYSFSFHD-KLFGQTLFYCS 85 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~DlG---------~~~L~~g~~~~f~F~~-~~~~~T~f~C~ 85 (134)
..+|++.|.- ...+.+.++=.....+-| ...+.||+++++.|.. .--|+-.|.|+
T Consensus 27 Gd~V~~~n~~-~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~ 91 (106)
T 2gim_A 27 GDTVEFLNNK-VPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 91 (106)
T ss_dssp TCEEEEEECS-SSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CCEEEEEECC-CCCceEEEeCCCCcccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC
Confidence 3468888875 335677766321111112 2357899999999953 34577889998
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=60.79 E-value=16 Score=29.42 Aligned_cols=55 Identities=16% Similarity=0.160 Sum_probs=36.5
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CCCCCcceecCCCCeEEEEEec--CCCCceeEEEEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KDDDVGEHVPSPNQSYSFSFHD--KLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd~DlG~~~L~~g~~~~f~F~~--~~~~~T~f~C~f 86 (134)
..|+++|+| +....+..|--. ...|=....++||++|.++|.. +--|+-.|.|+.
T Consensus 57 v~v~~~N~l-~~~tsiHwHG~~~~~~~DG~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~ 115 (439)
T 2xu9_A 57 VRLTLENRL-PEPTNLHWHGLPISPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHL 115 (439)
T ss_dssp EEEEEEECS-SSCBCCEEETCCCCTTTSCTTCCBCTTCEEEEEEECCSSCCEEEEEECCC
T ss_pred EEEEEEECC-CCCcceEeCCCCCCccccCCcccCCCCCeEEEEEecCCCCCcceEeccCC
Confidence 458899999 445677777643 2222112458999999999983 234666666876
No 10
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=57.81 E-value=29 Score=28.84 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=43.9
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCC----CC--Cc--ceecCCCCeEEEEEecCCCCceeEEEEeEeC---C--eEEEEEE
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKD----DD--VG--EHVPSPNQSYSFSFHDKLFGQTLFYCSFKWN---N--GGLHIYI 97 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd----~D--lG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w~---~--~~f~~y~ 97 (134)
..|+++|.|+..+..+..|--.-. .| -| ..-++||++|.++|...--|+--|.|+...+ | --+.|..
T Consensus 44 v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~ 123 (552)
T 1aoz_A 44 VVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDP 123 (552)
T ss_dssp EEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEEC
T ss_pred EEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeC
Confidence 458999999424677777764311 12 11 1358999999999997656777777887433 2 2455555
Q ss_pred e
Q 043453 98 Q 98 (134)
Q Consensus 98 ~ 98 (134)
.
T Consensus 124 ~ 124 (552)
T 1aoz_A 124 P 124 (552)
T ss_dssp C
T ss_pred C
Confidence 4
No 11
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=57.59 E-value=15 Score=30.55 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=43.5
Q ss_pred eEEEEEeCCCC----CCeeEEEeceeC----CCCCcc-----eecCCCCeEEEEEe-cCCCCceeEEEEeEeC---C--e
Q 043453 31 RVVMITNNTSE----GRFDLTVHCKSK----DDDVGE-----HVPSPNQSYSFSFH-DKLFGQTLFYCSFKWN---N--G 91 (134)
Q Consensus 31 ~~V~I~N~l~~----~~~~L~vhC~Sk----d~DlG~-----~~L~~g~~~~f~F~-~~~~~~T~f~C~f~w~---~--~ 91 (134)
..|+++|+|+. ....+..|--.- ..| |. ..++||++|.++|. +.--|+--|.|+...+ | -
T Consensus 65 v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D-Gv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G 143 (521)
T 1v10_A 65 FQINVIDQLTDANMRRATSIHWHGFFQAGTTEMD-GPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRG 143 (521)
T ss_dssp EEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGS-CCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEE
T ss_pred EEEEEEECCCCccCCCCceEecCCeeccCCCccC-CCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceE
Confidence 35889999941 567788887532 122 22 24899999999999 5556776677887432 2 2
Q ss_pred EEEEEEe
Q 043453 92 GLHIYIQ 98 (134)
Q Consensus 92 ~f~~y~~ 98 (134)
-+.|...
T Consensus 144 ~liV~~~ 150 (521)
T 1v10_A 144 AFVVYDP 150 (521)
T ss_dssp EEEEECT
T ss_pred EEEEcCC
Confidence 4555543
No 12
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=56.35 E-value=11 Score=29.21 Aligned_cols=56 Identities=11% Similarity=0.182 Sum_probs=37.7
Q ss_pred eEEEEEeCCCC-CCeeEEEeceeCCCC-CcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 31 RVVMITNNTSE-GRFDLTVHCKSKDDD-VGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~-~~~~L~vhC~Skd~D-lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..|+++|.++. ..+.+.+|=....+| -+...+.||+++.+.|...--|+-.|.|+.
T Consensus 75 v~v~~~N~~~~~~~h~~~~h~~~~~~~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~ 132 (336)
T 1oe1_A 75 VQLTLVNPATNAMPHNVDFHGATGALGGAKLTNVNPGEQATLRFKADRSGTFVYHCAP 132 (336)
T ss_dssp EEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCC
T ss_pred EEEEEEcCCCCCccccceECCCCCCCCCcceEEeCCCCEEEEEEECCCCeEEEEecCC
Confidence 35779999831 235677776432222 233458999999999986556777788986
No 13
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=55.39 E-value=19 Score=23.07 Aligned_cols=48 Identities=17% Similarity=0.333 Sum_probs=30.9
Q ss_pred EEEEEeCCCCCCeeEEEeceeCCCCCcce-ecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 32 VVMITNNTSEGRFDLTVHCKSKDDDVGEH-VPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 32 ~V~I~N~l~~~~~~L~vhC~Skd~DlG~~-~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
++.++|.. ...+.+.+. ++|.. .+.||+++++.|..+--|+=.|.|+.
T Consensus 49 ~~~~~n~d-~~~H~~~i~------~~~~~~~i~pG~~~~~~f~~~~~G~y~~~C~~ 97 (112)
T 1iby_A 49 KVVVENKS-PISEGFSID------AFGVQEVIKAGETKTISFTADKAGAFTIWCQL 97 (112)
T ss_dssp EEEEEECS-SSCEEEEEG------GGTEEEEECTTCEEEEEEECCSCEEEEEBCSS
T ss_pred EEEEEECC-CCeEEEEEc------CCCceeEeCCCCEEEEEEECCCCEEEEEECCC
Confidence 34467776 323444432 23433 57999999999976555777788987
No 14
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=54.59 E-value=14 Score=24.84 Aligned_cols=24 Identities=21% Similarity=0.645 Sum_probs=19.6
Q ss_pred ecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 61 VPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
.+.||+++++.|.. -|.-.|+|.+
T Consensus 98 ~l~pG~t~~~tF~~--~G~y~y~C~~ 121 (132)
T 3c75_A 98 MMTKDQAYAITFNE--AGSYDYFCTP 121 (132)
T ss_dssp CBCTTEEEEEEECS--CEEEEEECSS
T ss_pred ccCCCCEEEEEcCC--CEEEEEEeCC
Confidence 47899999999954 3788899987
No 15
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=53.95 E-value=10 Score=29.41 Aligned_cols=55 Identities=22% Similarity=0.382 Sum_probs=35.5
Q ss_pred eEEEEEeCCCC-CCeeEEEeceeCCCCCc--ceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 31 RVVMITNNTSE-GRFDLTVHCKSKDDDVG--EHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~-~~~~L~vhC~Skd~DlG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..|+++|.++. ....+..|--.. .|=+ ...+.||+++.+.|..+--|+-.|.|+.
T Consensus 80 v~v~~~N~~~~~~~~~ih~HG~~~-~dG~~~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~ 137 (327)
T 1kbv_A 80 VEVEFSNNPSSTVPHNVDFHAATG-QGGGAAATFTAPGRTSTFSFKALQPGLYIYHCAV 137 (327)
T ss_dssp EEEEEEECTTCSSCBCCEETTCCS-GGGGTTTTCBCTTEEEEEEEECCSCEEEEEECCC
T ss_pred EEEEEEECCCCCCceeeEeCcccc-CCCCCcceeecCCCEEEEEEECCCCeEEEEEeCC
Confidence 35778999942 246677775432 2211 1248999999999986545665677875
No 16
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=52.89 E-value=27 Score=29.27 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=39.2
Q ss_pred eEEEEEeCCCCCCeeEEEeceeC----CCC--Cc--ceecCC-CCeEEEEEecCCCCceeEEEEeEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSK----DDD--VG--EHVPSP-NQSYSFSFHDKLFGQTLFYCSFKW 88 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Sk----d~D--lG--~~~L~~-g~~~~f~F~~~~~~~T~f~C~f~w 88 (134)
..|+++|+|+.....+..|--.- ..| -| ...++| |++|.+.|...--|+--|.|+...
T Consensus 77 v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~ 143 (559)
T 2q9o_A 77 VEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSA 143 (559)
T ss_dssp EEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTT
T ss_pred EEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccc
Confidence 45889999943457788887532 112 11 234899 999999999765676667788743
No 17
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=51.76 E-value=28 Score=27.04 Aligned_cols=58 Identities=21% Similarity=0.327 Sum_probs=37.9
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCC----CCCc----ceecCCCCeEEEEEecCCCCceeEEEEeEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKD----DDVG----EHVPSPNQSYSFSFHDKLFGQTLFYCSFKW 88 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd----~DlG----~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w 88 (134)
+..|+++|.+ .....|..|--.-. .|=. .-.+.||++|.+.|...--|+-.|.|+...
T Consensus 44 ~v~v~v~N~l-~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~ 109 (339)
T 2zwn_A 44 DVIVNVTNNT-SLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNV 109 (339)
T ss_dssp EEEEEEEEES-SSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSH
T ss_pred EEEEEEEECC-CCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCc
Confidence 3458899999 44566777764311 1211 135899999999999764465556677643
No 18
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=51.63 E-value=27 Score=29.14 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=37.7
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CCCC-CcceecCCCCeEEEEEecCC-CCceeEEEEeEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KDDD-VGEHVPSPNQSYSFSFHDKL-FGQTLFYCSFKW 88 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd~D-lG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f~w 88 (134)
..|+++|+| +....+..|--. ...| .-...++||++|.++|...- -|+--|.|+...
T Consensus 79 v~v~v~N~l-~~~tsiHwHGl~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~ 139 (534)
T 3abg_A 79 TVVRFINNA-EAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMH 139 (534)
T ss_dssp EEEEEEECS-SSCBCEEEETCCCCTTTTTCSSSCBSSCSCCCEEECCCSSSCEEEEEECCTT
T ss_pred EEEEEEECC-CCCceEEECCCcCCCCCCCCCCCCCCCCCeEEEEEecCCcceeEEEecCccc
Confidence 468899999 445777777653 2222 12235799999999998653 355556688743
No 19
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=49.13 E-value=18 Score=22.61 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=33.3
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCCCC------------C--cceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKDDD------------V--GEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd~D------------l--G~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
.+|++.|.= ...+.+.++ +.+.- + ..-.+.||+++++.|.. -|+=.|.|+.
T Consensus 25 ~tV~~~n~~-~~~H~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf~~--~G~y~y~C~~ 89 (102)
T 1kdj_A 25 EAVEFTLVG-ETGHNIVFD--IPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVST--PGTYTFYCTP 89 (102)
T ss_dssp CCEEEEECS-SSCBCCEEC--CCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCCS--CEEEEEECST
T ss_pred CEEEEEECC-CCCeEEEEe--CcccccccccchhhcccccccceecCCCCEEEEEeCC--CeEEEEEeCC
Confidence 358888875 345677776 22111 1 22357999999999943 4788899983
No 20
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=48.53 E-value=18 Score=27.95 Aligned_cols=56 Identities=11% Similarity=0.177 Sum_probs=36.4
Q ss_pred eEEEEEeCCCC-CCeeEEEeceeCC-CCCcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 31 RVVMITNNTSE-GRFDLTVHCKSKD-DDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~-~~~~L~vhC~Skd-~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..|+++|.+.. .-+.+.+|-.... +.-+...+.||+++.+.|...--|+-.|.|+.
T Consensus 81 v~v~~~N~~~~~~~hg~~~~~~~~~~~~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~ 138 (340)
T 2bw4_A 81 VELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAP 138 (340)
T ss_dssp EEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCC
T ss_pred EEEEEEeCCCCCccCcceeCCcCCCCCCccceEeCCCCEEEEEEECCCCeEEEEEcCC
Confidence 45788999821 2345666653321 22334468999999999986545666677986
No 21
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=48.45 E-value=33 Score=27.81 Aligned_cols=55 Identities=11% Similarity=0.058 Sum_probs=38.3
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CC-CCCcceecCCCCeEEEEEecCC-CCceeEEEEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KD-DDVGEHVPSPNQSYSFSFHDKL-FGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd-~DlG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f 86 (134)
..|+++|+| +....+..|--. .. |-.....++||++|.++|...- -|+--|.|+.
T Consensus 60 v~v~~~N~l-~~~tsiHwHG~~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~ 118 (451)
T 2uxt_A 60 VKLIYSNRL-TENVSMTVAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANT 118 (451)
T ss_dssp EEEEEEECS-SSCBCEEEETCCCCGGGSCSGGGCBCTTCEECCEEECCSCSEEEEEEECC
T ss_pred EEEEEEECC-CCCccEEECCccCCCCCCCCCcCcCCCCCeEEEEEEcCCCCcceEEecCC
Confidence 458899999 446777777643 11 2222356899999999998663 5666677887
No 22
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=47.94 E-value=46 Score=20.39 Aligned_cols=54 Identities=19% Similarity=0.336 Sum_probs=34.9
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCCCc-------ceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDDVG-------EHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~DlG-------~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|+++|.- +..+.+.++=....+... ...+.||+++++.|.. -|+=.|.|+.
T Consensus 25 G~~V~~~n~~-~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~--~G~y~y~C~~ 85 (98)
T 2plt_A 25 GETVNFVNNA-GFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTA--AGEYGYYCEP 85 (98)
T ss_dssp TCEEEEEECS-SCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCS--CEEEEEECGG
T ss_pred CCEEEEEECC-CCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCC--CeEEEEEcCC
Confidence 3468888885 435677766321111111 2367999999999973 4778899984
No 23
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=47.78 E-value=46 Score=20.38 Aligned_cols=54 Identities=19% Similarity=0.274 Sum_probs=34.0
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCC-----CcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDD-----VGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~D-----lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|++.|.= ...+.+.++=....++ .....|.||+++++.|.. -|.-.|+|..
T Consensus 26 G~~V~~~n~~-~~~H~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tf~~--~G~y~y~C~~ 84 (97)
T 1b3i_A 26 GDTVEFVMNK-VGPHNVIFDKVPAGESAPALSNTKLAIAPGSFYSVTLGT--PGTYSFYCTP 84 (97)
T ss_dssp TCEEEEEECS-SCCCCBEEEECCTTSCHHHHCBCCCCCSCSCCEEEECCS--CSEEEEECSS
T ss_pred CCEEEEEECC-CCCeEEEEeCCCCccccccccccceecCCCCEEEEEeCC--CeEEEEEccC
Confidence 3468888864 3356676653221000 112457899999999943 4788899984
No 24
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=47.06 E-value=28 Score=28.24 Aligned_cols=55 Identities=18% Similarity=0.212 Sum_probs=37.3
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCC--CC-CcceecCCCCeEEEEEecC-CCCceeEEEE
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKD--DD-VGEHVPSPNQSYSFSFHDK-LFGQTLFYCS 85 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd--~D-lG~~~L~~g~~~~f~F~~~-~~~~T~f~C~ 85 (134)
...|+++|+| +....+..|--.-. -| .....++||++|.++|... --|+--|.|+
T Consensus 47 ~v~v~~~N~l-~~~tsiHwHG~~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H 105 (448)
T 3aw5_A 47 RVDMTLKNKL-TEPTIVHWHGFDVNWHNDAHPSFAITPGESYNYSFDVVNRAGTYLYHPH 105 (448)
T ss_dssp EEEEEEEECS-SSCBCEEEETCCCCHHHHTCGGGCBCTTCEEEEEEECCSCSEEEEEEEC
T ss_pred EEEEEEEECC-CCceeEEeCCccCCCccCCCCCccCCCCCEEEEEEEcCCCCCceEeccC
Confidence 3469999999 44677777764321 11 1125689999999999965 4566666677
No 25
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=46.78 E-value=36 Score=28.15 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=42.3
Q ss_pred eEEEEEeCCCC----CCeeEEEecee----CCCC-C-c--ceecCCCCeEEEEEec-CCCCceeEEEEeEeC---C--eE
Q 043453 31 RVVMITNNTSE----GRFDLTVHCKS----KDDD-V-G--EHVPSPNQSYSFSFHD-KLFGQTLFYCSFKWN---N--GG 92 (134)
Q Consensus 31 ~~V~I~N~l~~----~~~~L~vhC~S----kd~D-l-G--~~~L~~g~~~~f~F~~-~~~~~T~f~C~f~w~---~--~~ 92 (134)
..|+++|+|+. .+..+..|--. ...| . | .-.++||++|.++|.. .--|+--|.|+...+ | --
T Consensus 44 v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~ 123 (499)
T 3pxl_A 44 FQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGP 123 (499)
T ss_dssp EEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEE
T ss_pred EEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeE
Confidence 46899999942 24667777642 1122 1 1 1258999999999986 445766677887432 2 25
Q ss_pred EEEEE
Q 043453 93 LHIYI 97 (134)
Q Consensus 93 f~~y~ 97 (134)
+.|..
T Consensus 124 lIV~~ 128 (499)
T 3pxl_A 124 FVVYD 128 (499)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 56654
No 26
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=46.40 E-value=39 Score=27.90 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=43.0
Q ss_pred eEEEEEeCCCC----CCeeEEEeceeC----CCCCcc-----eecCCCCeEEEEEec-CCCCceeEEEEeEeC---C--e
Q 043453 31 RVVMITNNTSE----GRFDLTVHCKSK----DDDVGE-----HVPSPNQSYSFSFHD-KLFGQTLFYCSFKWN---N--G 91 (134)
Q Consensus 31 ~~V~I~N~l~~----~~~~L~vhC~Sk----d~DlG~-----~~L~~g~~~~f~F~~-~~~~~T~f~C~f~w~---~--~ 91 (134)
..|+++|+|+. .+..+..|--.- ..| |. -.++||++|.++|.. .--|+--|.|+...+ | -
T Consensus 45 v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~D-Gv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G 123 (495)
T 3t6v_A 45 FQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWAD-GPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRG 123 (495)
T ss_dssp EEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGS-CCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEE
T ss_pred EEEEEEECCCCccCCCceEEEeCCcccCCCcccc-CCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceE
Confidence 45899999943 246677776421 122 22 248999999999986 445766677887433 2 2
Q ss_pred EEEEEEe
Q 043453 92 GLHIYIQ 98 (134)
Q Consensus 92 ~f~~y~~ 98 (134)
-+.|...
T Consensus 124 ~lIV~~~ 130 (495)
T 3t6v_A 124 PFVVYDP 130 (495)
T ss_dssp EEEEECT
T ss_pred EEEEcCc
Confidence 5666543
No 27
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=46.20 E-value=35 Score=21.08 Aligned_cols=54 Identities=17% Similarity=0.324 Sum_probs=34.1
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCCC---------cceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDDV---------GEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~Dl---------G~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|+++|.= ...+.+.++=....+.. +...+.||+++++.|.. -|+=.|+|..
T Consensus 24 G~tV~~~n~~-~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~~--~G~y~~~C~~ 86 (99)
T 1plc_A 24 GEKIVFKNNA-GFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSN--KGEYSFYCSP 86 (99)
T ss_dssp TCEEEEEECS-SCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECCS--CEEEEEECGG
T ss_pred CCEEEEEECC-CCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEECC--CceEEEEcCC
Confidence 3478898875 33566666532111111 11357999999999963 4778899984
No 28
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=44.91 E-value=49 Score=28.08 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=38.3
Q ss_pred eEEEEEeCCCCCCeeEEEeceeC----CCCCcc-----eecCCCCeEEEEEecCCCCceeEEEEeEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSK----DDDVGE-----HVPSPNQSYSFSFHDKLFGQTLFYCSFKW 88 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Sk----d~DlG~-----~~L~~g~~~~f~F~~~~~~~T~f~C~f~w 88 (134)
..|+++|+|+..+..+.-|--.- ..| |. --++||++|.++|...--|+--|.++...
T Consensus 108 v~V~v~N~l~~~~tsIHwHGl~~~~t~~~D-Gvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~ 173 (580)
T 3sqr_A 108 LIIHVTNNLEHNGTSIHWHGIRQLGSLEYD-GVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSL 173 (580)
T ss_dssp EEEEEEECCSSCCBCEEETTCCCTTCGGGS-CCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTT
T ss_pred EEEEEEECCCCCcceEEecccccCCCcccc-CCCccccCCCCCCCeEEEEEECCCCcceEEeecccc
Confidence 46899999942456677775331 112 22 35899999999999775676667787743
No 29
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=44.39 E-value=33 Score=28.37 Aligned_cols=55 Identities=11% Similarity=0.079 Sum_probs=36.5
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CCCC-CcceecCCCCeEEEEEecCC--CCceeEEEEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KDDD-VGEHVPSPNQSYSFSFHDKL--FGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd~D-lG~~~L~~g~~~~f~F~~~~--~~~T~f~C~f 86 (134)
..|+++|+| +....+..|=-. ..-| .....++||++|.+.|...- -|+--|.|+.
T Consensus 92 v~v~v~N~l-~~~tsiHwHGl~~~~~~DG~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~ 151 (481)
T 3zx1_A 92 LEILVKNKL-KEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHP 151 (481)
T ss_dssp EEEEEEECS-SSCBCCEEETCCCCGGGSCCTTSCBCTTCEEEEEEECCTTCCEEEEEECCC
T ss_pred EEEEEEeCC-CCCeeEEecCcccCCccCCCccCcCCCCCeEEEEEeCCCCCCceEEEeecC
Confidence 458999999 445677777643 1222 22346899999999998643 3455566775
No 30
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=43.83 E-value=39 Score=25.78 Aligned_cols=45 Identities=13% Similarity=0.212 Sum_probs=31.0
Q ss_pred ceEEEEEeCCCCCCeeEEEecee--CCCCCc------------ceecCCCCeEEEEEecC
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKS--KDDDVG------------EHVPSPNQSYSFSFHDK 75 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~S--kd~DlG------------~~~L~~g~~~~f~F~~~ 75 (134)
+..|+++|.| .....|..|--. +..|=+ ...++||++|.+.|..+
T Consensus 69 ~v~v~~~N~l-~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 69 IMKVHFKNKA-HKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp EEEEEEEECS-SSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred EEEEEEEECC-CCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 3469999999 556778888654 112211 14689999999999864
No 31
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=43.64 E-value=44 Score=27.75 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=39.0
Q ss_pred eEEEEEeCCCCCCeeEEEeceeC----CCC--Cc--ceecCCCCeEEEEEecC-CCCceeEEEEeE
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSK----DDD--VG--EHVPSPNQSYSFSFHDK-LFGQTLFYCSFK 87 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Sk----d~D--lG--~~~L~~g~~~~f~F~~~-~~~~T~f~C~f~ 87 (134)
..|+++|+|+.....+..|--.- ..| -| .--++||++|.++|... --|+--|.|+..
T Consensus 44 v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~ 109 (534)
T 1zpu_A 44 VQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTD 109 (534)
T ss_dssp EEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSS
T ss_pred EEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCc
Confidence 45899999942567788887441 122 11 23589999999999965 556666777764
No 32
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=41.35 E-value=61 Score=19.99 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=32.9
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCCCcc-------eecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDDVGE-------HVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~DlG~-------~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|++.|.= +..+.+.+.=....+.... -.+.||+++++.|.. -|.-.|+|..
T Consensus 25 GdtV~~~n~~-~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~--~G~y~y~C~~ 85 (98)
T 1iuz_A 25 GEAIEFVNNA-GFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLST--PGVYGVYCEP 85 (98)
T ss_dssp TCEEEEEECS-SCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCS--CEEEEEECTT
T ss_pred CCEEEEEECC-CCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCC--CEEEEEEchh
Confidence 3468888875 3345565432110011111 358999999999953 4777899986
No 33
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=37.93 E-value=37 Score=21.66 Aligned_cols=50 Identities=14% Similarity=0.305 Sum_probs=32.0
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCC-----CcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDD-----VGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~D-----lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|++.|.= ...+.+.+. +.. .....|.+|+++++.|.. -|.-.|+|.+
T Consensus 41 G~tV~~~N~d-~~~H~v~~~----~~~~~~~~~~s~~l~~g~~~~~tf~~--~G~y~~~C~~ 95 (106)
T 1id2_A 41 GETVYWVNGE-VMPHNVAFK----KGIVGEDAFRGEMMTKDQAYAITFNE--AGSYDYFCTP 95 (106)
T ss_dssp TCEEEEEECS-SSCBCCEEC----TTTSSSSCEECCCBCTTEEEEEEECS--CEEEEEECSS
T ss_pred CCEEEEEECC-CCcEEEEEe----CCCCCcccccccccCCCCEEEEEeCC--CEEEEEEeCC
Confidence 3468888775 323444432 221 112257899999999954 4888899988
No 34
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=37.77 E-value=42 Score=25.16 Aligned_cols=44 Identities=18% Similarity=0.303 Sum_probs=30.7
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCC--CC---CcceecCCCCeEEEEEecC
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKD--DD---VGEHVPSPNQSYSFSFHDK 75 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd--~D---lG~~~L~~g~~~~f~F~~~ 75 (134)
..|+++|.| .....+..|--.-. .| +....++||++|.+.|...
T Consensus 46 v~v~~~N~~-~~~~siH~HG~~~~~~~DG~~~t~~~i~pG~~~~Y~f~~~ 94 (276)
T 3kw8_A 46 LHIEFTNTM-DVRASLHVHGLDYEISSDGTAMNKSDVEPGGTRTYTWRTH 94 (276)
T ss_dssp EEEEEEECS-SSCBCCEESSSBCCGGGSCCTTTTCSBCTTCEEEEEEECC
T ss_pred EEEEEEECC-CCCccEeecCcccCCccCCCcCCcCCCCCCCEEEEEEEcC
Confidence 459999999 55677888775421 12 1123689999999999864
No 35
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=37.57 E-value=48 Score=25.39 Aligned_cols=45 Identities=13% Similarity=0.209 Sum_probs=27.9
Q ss_pred ceEEEEEeCCCCCCeeEEEecee--CCCC---CcceecCCCCeEEEEEecC
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKS--KDDD---VGEHVPSPNQSYSFSFHDK 75 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~S--kd~D---lG~~~L~~g~~~~f~F~~~ 75 (134)
+..|+++|.| .....+..|=-. +..| .....++||++|.++|...
T Consensus 51 ~v~v~~~N~l-~~~~siH~HG~~~~~~~dG~~~~~~~i~PG~~~~Y~~~~~ 100 (313)
T 3tas_A 51 TLHIEFENTM-DVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTH 100 (313)
T ss_dssp EEEEEEEECS-SSCBCCEESSSBCCGGGSCSTTTTCCBCTTCEEEEEEBCC
T ss_pred EEEEEEEECC-CCCccEeecCCcCCccCCCCccccCCcCCCCEEEEEEEec
Confidence 3469999999 434556555421 1111 1123478999999999753
No 36
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=36.74 E-value=72 Score=19.49 Aligned_cols=54 Identities=20% Similarity=0.322 Sum_probs=33.9
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCCC---------cceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDDV---------GEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~Dl---------G~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|+++|.= ...+.+.++=....+.+ ....|.||+++++.|.. -|+=.|.|+.
T Consensus 24 G~tV~~~n~~-~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~~--~G~y~~~C~~ 86 (99)
T 1byp_A 24 GEKITFKNNA-GFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTE--KGTYKFYCAP 86 (99)
T ss_dssp TEEEEEEECS-SCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECS--CEEEEEECGG
T ss_pred CCEEEEEECC-CCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeCC--CcEEEEEcCC
Confidence 3468888875 33566666521110111 11357899999999974 4778899984
No 37
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=36.60 E-value=21 Score=23.86 Aligned_cols=26 Identities=19% Similarity=0.483 Sum_probs=21.4
Q ss_pred ecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 61 VPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
.|.||++++..|...--|+=.|.|++
T Consensus 100 ~l~pGet~~v~f~~~~pG~y~f~C~~ 125 (139)
T 2aan_A 100 LANGNETVEVTFTAPAAGTYLYICTV 125 (139)
T ss_dssp CBCTTCEEEEEEECCSSEEEEEECCS
T ss_pred ccCCCCEEEEEEECCCCeEEEEEcCC
Confidence 37999999999986445788899986
No 38
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=36.56 E-value=24 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.322 Sum_probs=21.2
Q ss_pred ecCCCCeEEEEEecC---CCCceeEEEEe
Q 043453 61 VPSPNQSYSFSFHDK---LFGQTLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~---~~~~T~f~C~f 86 (134)
.|.||++++..|... --|+=.|+|++
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~ 114 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSY 114 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCS
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCC
Confidence 479999999999853 34778899997
No 39
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=34.03 E-value=51 Score=27.27 Aligned_cols=55 Identities=16% Similarity=0.045 Sum_probs=36.3
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCC---CCCcceecCCCCeEEEEEecCC-CCceeEEEEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKD---DDVGEHVPSPNQSYSFSFHDKL-FGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd---~DlG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f 86 (134)
..|+++|+| +....+..|=-.-. |-.-...+.||++|.+.|...- -|+--|.|+.
T Consensus 58 v~v~~~N~l-~~~tsiHwHG~~~~~~~DG~p~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~ 116 (488)
T 3od3_A 58 VTVDIYNQL-TEETTLHWHGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQ 116 (488)
T ss_dssp EEEEEEECS-SSCBCCEEETCCCCHHHHCCTTCCBCTTCEEEEEEECCSCSEEEEEECCC
T ss_pred EEEEEEeCC-cCceeEeecccccCcccCCCCcCcCcCCCeEEEEEecCCCceeEEEEecC
Confidence 458999999 44566777764311 1112346899999999999763 3555566775
No 40
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=33.43 E-value=74 Score=21.61 Aligned_cols=45 Identities=22% Similarity=0.206 Sum_probs=27.8
Q ss_pred CCceEEEEEeCCCCCCeeEEEeceeCCC------------CCcce-ecCCCCeEEEEEe
Q 043453 28 TPKRVVMITNNTSEGRFDLTVHCKSKDD------------DVGEH-VPSPNQSYSFSFH 73 (134)
Q Consensus 28 ~~k~~V~I~N~l~~~~~~L~vhC~Skd~------------DlG~~-~L~~g~~~~f~F~ 73 (134)
+..++|+|.|.- ...-+|.-+=|--.| =.|.+ .|.||+.|++.=.
T Consensus 29 ~faY~I~I~N~~-~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg 86 (126)
T 1xvs_A 29 VFAYLITIKNLS-SQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSG 86 (126)
T ss_dssp EEEEEEEEEECS-SSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEE
T ss_pred EEEEEEEEEECC-CCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCC
Confidence 346889999976 334555554444222 23444 5899998887543
No 41
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=33.00 E-value=93 Score=21.54 Aligned_cols=45 Identities=18% Similarity=0.233 Sum_probs=28.7
Q ss_pred CCceEEEEEeCCCCCCeeEEEeceeCCCC------------Ccce-ecCCCCeEEEEEe
Q 043453 28 TPKRVVMITNNTSEGRFDLTVHCKSKDDD------------VGEH-VPSPNQSYSFSFH 73 (134)
Q Consensus 28 ~~k~~V~I~N~l~~~~~~L~vhC~Skd~D------------lG~~-~L~~g~~~~f~F~ 73 (134)
+..++|+|.|.- ...-+|.-+=|--.|. .|.+ .|.||+.|++.=.
T Consensus 34 ~FaY~ItI~N~~-~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg 91 (139)
T 1xq4_A 34 VFAYTVRITNTG-SHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSG 91 (139)
T ss_dssp EEEEEEEEEECS-SSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEE
T ss_pred EEEEEEEEEeCC-CCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCC
Confidence 346889999977 4345555555543222 4444 5899998887543
No 42
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=31.95 E-value=81 Score=21.42 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=27.6
Q ss_pred CCceEEEEEeCCCCCCeeEEEeceeCCC------------CCcce-ecCCCCeEEEEE
Q 043453 28 TPKRVVMITNNTSEGRFDLTVHCKSKDD------------DVGEH-VPSPNQSYSFSF 72 (134)
Q Consensus 28 ~~k~~V~I~N~l~~~~~~L~vhC~Skd~------------DlG~~-~L~~g~~~~f~F 72 (134)
+..++|+|.|.- ...-+|.-+=|--.| =.|.+ .|.||+.|++.=
T Consensus 30 ~faY~I~I~N~~-~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 30 AFAYSIRIQNAG-AVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEEEEEECS-SSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEEEEeCC-CCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 346789999976 334555554444222 24555 589999888753
No 43
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=31.75 E-value=89 Score=19.01 Aligned_cols=54 Identities=15% Similarity=0.246 Sum_probs=33.3
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCC----CC--CcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKD----DD--VGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd----~D--lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|+++|.= ...+.+.++=...- .+ .....+.||+++++.|.. -|.=.|.|+.
T Consensus 26 G~~V~~~n~~-~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~--~G~y~~~C~~ 85 (98)
T 1pcs_A 26 GEEVKWVNNK-LSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTE--PGTYTYYCEP 85 (98)
T ss_dssp TCEEEEEECS-SCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCS--CEEEEEECGG
T ss_pred CCEEEEEECC-CCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCC--CeEEEEEcCC
Confidence 3468888864 33566766421100 00 013457999999999943 4778899984
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=31.60 E-value=57 Score=24.85 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=27.7
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CC-CCCc--ceecCCCCeEEEEEecC
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KD-DDVG--EHVPSPNQSYSFSFHDK 75 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd-~DlG--~~~L~~g~~~~f~F~~~ 75 (134)
..|+++|.| +....|..|=-. ++ |-.+ .-.++||++|.+.|...
T Consensus 68 v~v~~~N~l-~~~~siH~HG~~~~~~~DG~~~~~~~i~PG~t~~Y~~~~~ 116 (299)
T 3t9w_A 68 LEIDLVNTT-DRVLSLHPHGVDYDVNSDGTLMNGSAVMPGQTRRYTWRSH 116 (299)
T ss_dssp EEEEEEECS-SSCBCCEESSSBCCGGGSCCTTTTCCBCTTCEEEEEEBCC
T ss_pred EEEEEEECC-CCCccEEeCCcccCCccCCCccccCccCCCCeEEEEEEee
Confidence 469999999 434556665422 11 2111 22578999999999743
No 45
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=31.36 E-value=1.6e+02 Score=24.16 Aligned_cols=27 Identities=0% Similarity=-0.123 Sum_probs=17.9
Q ss_pred eecCCCCeEEEEEecCCCCceeE-EEEe
Q 043453 60 HVPSPNQSYSFSFHDKLFGQTLF-YCSF 86 (134)
Q Consensus 60 ~~L~~g~~~~f~F~~~~~~~T~f-~C~f 86 (134)
..+.||++|.+.|...--+.|.| ..+.
T Consensus 147 ~~I~PG~~~~Y~f~~~q~~GT~WYHsH~ 174 (612)
T 3gyr_A 147 NAVGFGDAQLSEYPNDHQATQWWYHDHA 174 (612)
T ss_dssp GCBCTTCEEEEEECCCSCSEEEEEEECC
T ss_pred CccCCCCCEEEEEEcCCCCceEEEeeCC
Confidence 35799999999997543334544 3553
No 46
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=29.83 E-value=89 Score=20.64 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=33.0
Q ss_pred CceEEEEEeCCCCCCeeEEEe--ceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 29 PKRVVMITNNTSEGRFDLTVH--CKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 29 ~k~~V~I~N~l~~~~~~L~vh--C~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
+.-+|+..|.= . ++.+.++ |... . -..-.+.||+++++.|.. -|.=.|+|..
T Consensus 27 ~GdtV~f~~~~-~-~H~v~~~~~~~p~-~-~~~~~~~pG~t~~~tF~~--~G~y~y~C~~ 80 (123)
T 1paz_A 27 PGDTVTFIPVD-K-GHNVESIKDMIPE-G-AEKFKSKINENYVLTVTQ--PGAYLVKCTP 80 (123)
T ss_dssp TTCEEEEEESS-S-SCCCEECTTCSCT-T-CCCCBCCTTCCEEEECCS--CEEEEEECTT
T ss_pred CCCEEEEEECC-C-CeEEEEecccCCC-C-ccceecCCCCEEEEEeCC--CEEEEEEeCC
Confidence 34568888875 3 4667664 1111 1 111235689999999964 3778899986
No 47
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=29.00 E-value=28 Score=30.60 Aligned_cols=57 Identities=12% Similarity=0.192 Sum_probs=35.7
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CCCCCcc----eecCCCCeEEEEEecC----------CCCceeEEEEeEe
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KDDDVGE----HVPSPNQSYSFSFHDK----------LFGQTLFYCSFKW 88 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd~DlG~----~~L~~g~~~~f~F~~~----------~~~~T~f~C~f~w 88 (134)
..|+++|.| +....|..|--. ++.|=|. ..++||++|.+.|... --|+-.|.|+...
T Consensus 209 v~v~~~N~l-~~~~siH~HG~~~~~~~~dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~ 281 (770)
T 2r7e_B 209 IMVTFRNQA-SRPYSFYSSLISYEEDQRQGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDL 281 (770)
T ss_dssp EEEEEECCS-SSCCCCCBTTCCCCCCSSSCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSS
T ss_pred EEEEEEECC-CCCcceeecccccccccCCCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCc
Confidence 469999999 434556666533 2222143 4689999999999854 2344445566643
No 48
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=28.15 E-value=88 Score=20.93 Aligned_cols=55 Identities=9% Similarity=0.087 Sum_probs=33.5
Q ss_pred CceEEEEEeCCCCCCeeEEEeceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453 29 PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87 (134)
Q Consensus 29 ~k~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 87 (134)
+.-+|+.+|.= . .+.+..+=....+....-.+.||++|++.|... |.=.|+|...
T Consensus 28 ~GDTV~f~n~~-~-~Hnv~~~~~~~p~g~~~~~~~pg~t~s~TF~~~--G~y~Y~C~~H 82 (124)
T 3ef4_A 28 AGDTVKFVPTD-K-SHNAESVREVWPEGVAPVKGGFSKEVVFNAEKE--GLYVLKCAPH 82 (124)
T ss_dssp TTCEEEEECSS-S-SCCCEECTTTSCTTSCCCBCCTTCCEEEECCSS--EEEEEECTTT
T ss_pred CCCEEEEEECC-C-CccEEEeCCcCCCCccccccCCCCEEEEEeCCC--eEEEEEcCCC
Confidence 44578888874 2 455555310001111122467999999999643 8888999853
No 49
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=27.51 E-value=84 Score=21.60 Aligned_cols=45 Identities=24% Similarity=0.228 Sum_probs=28.1
Q ss_pred CCceEEEEEeCCCCCCeeEEEeceeCCC------------CCcce-ecCCCCeEEEEEe
Q 043453 28 TPKRVVMITNNTSEGRFDLTVHCKSKDD------------DVGEH-VPSPNQSYSFSFH 73 (134)
Q Consensus 28 ~~k~~V~I~N~l~~~~~~L~vhC~Skd~------------DlG~~-~L~~g~~~~f~F~ 73 (134)
+..++|+|.|.- ...-+|.-+=|--.| =.|.+ .|.||+.|++.=.
T Consensus 29 ~faY~ItI~N~~-~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg 86 (134)
T 1tza_A 29 LFSYTITIINLG-EQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSG 86 (134)
T ss_dssp EEEEEEEEEECS-SSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEE
T ss_pred EEEEEEEEEeCC-CCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCC
Confidence 346889999977 434555555544322 23444 4899998887543
No 50
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=27.43 E-value=1e+02 Score=18.29 Aligned_cols=51 Identities=20% Similarity=0.389 Sum_probs=32.5
Q ss_pred ceEEEEEeCCCCCCeeEEEeceeCCCCCc--ceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVHCKSKDDDVG--EHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vhC~Skd~DlG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..+|++.|.- ...+.+.++= ..+++ ...+.||+++++.|.. .|.-.|.|+.
T Consensus 26 Gd~V~~~n~~-~~~H~v~~~~---~~~~~~~~~~~~~g~~~~~~f~~--~G~y~~~C~~ 78 (91)
T 1bxv_A 26 GDTVQWVNNK-LAPHNVVVEG---QPELSHKDLAFSPGETFEATFSE--PGTYTYYCEP 78 (91)
T ss_dssp TCEEEEEECS-SCCEEEEETT---CGGGCEEEEECSTTCEEEEECCS--CEEEEEECTT
T ss_pred CCEEEEEECC-CCCcEEEEeC---CCccCcccceeCCCCEEEEEeCC--CEEEEEEeCC
Confidence 3468888864 3346666542 11222 2357999999999943 4777899983
No 51
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=27.22 E-value=72 Score=24.84 Aligned_cols=43 Identities=21% Similarity=0.319 Sum_probs=28.1
Q ss_pred eEEEEEeCCCCCCeeEEEecee--CCCCCcc----eecCCCCeEEEEEecC
Q 043453 31 RVVMITNNTSEGRFDLTVHCKS--KDDDVGE----HVPSPNQSYSFSFHDK 75 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~S--kd~DlG~----~~L~~g~~~~f~F~~~ 75 (134)
..|+++|.+ .....|..|--. ..-| |. -.++||++|.+.|...
T Consensus 87 v~v~~~N~l-~~~~sih~HG~~~~~~~D-G~~~t~~~I~PG~~~~y~f~~~ 135 (343)
T 3cg8_A 87 LHIEFTNTM-DVRASLHVHGLDYEISSD-GTAMNKSDVEPGGTRTYTWRTH 135 (343)
T ss_dssp EEEEEEECS-SSCBCCEESSSBCCGGGS-CCTTTTCSBCTTCEEEEEEECC
T ss_pred EEEEEEECC-CCCeeEEecCcccCCcCC-CcccccccccCCCEEEEEEEeC
Confidence 458999999 434556666533 1122 22 2589999999999753
No 52
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=27.10 E-value=59 Score=24.90 Aligned_cols=57 Identities=12% Similarity=0.211 Sum_probs=36.1
Q ss_pred eEEEEEeCCCC-CCeeEEEeceeCCCC-CcceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453 31 RVVMITNNTSE-GRFDLTVHCKSKDDD-VGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87 (134)
Q Consensus 31 ~~V~I~N~l~~-~~~~L~vhC~Skd~D-lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 87 (134)
..|+++|.... --+.+.+|-....++ -+...+.||+++.+.|...--|+-.|.|+..
T Consensus 74 v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~ 132 (333)
T 1mzy_A 74 VELTLINPPENTMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPG 132 (333)
T ss_dssp EEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCS
T ss_pred EEEEEEECCCCcccccceecCCCCCCCCCceeEeCCCCEEEEEEECCCCEEEEEeecCC
Confidence 34778998421 124466664321111 2344689999999999865567777889874
No 53
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=26.88 E-value=94 Score=21.31 Aligned_cols=25 Identities=24% Similarity=0.590 Sum_probs=19.3
Q ss_pred ecCCCC--eEEEEEecCCCCceeEEEEe
Q 043453 61 VPSPNQ--SYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 61 ~L~~g~--~~~f~F~~~~~~~T~f~C~f 86 (134)
.+.||+ +.++.|.. --|+=.|.|++
T Consensus 113 ~i~PG~sgt~t~tft~-~pGtY~y~C~~ 139 (154)
T 2cal_A 113 VPKDGKFGYTDFTWHP-TAGTYYYVCQI 139 (154)
T ss_dssp CCBTTBEEEEEEEECC-CSEEEEEECCS
T ss_pred ccCCCCceEEEEEEEE-CCceEEEECCC
Confidence 568999 88777775 45777888975
No 54
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=26.27 E-value=90 Score=20.62 Aligned_cols=51 Identities=12% Similarity=0.098 Sum_probs=32.5
Q ss_pred ceEEEEEeCCCCCCeeEEEe--ceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 30 KRVVMITNNTSEGRFDLTVH--CKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 30 k~~V~I~N~l~~~~~~L~vh--C~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
.-+|+..|.= . ++.+.+. +.. ++-..-.+.||+++++.|.. -|.=.|+|..
T Consensus 28 GdtV~f~n~~-~-~H~v~~~~~~~p--~~~~~~~~~pG~t~~~tF~~--~G~y~y~C~~ 80 (123)
T 1pmy_A 28 GDSIKFLPTD-K-GHNVETIKGMAP--DGADYVKTTVGQEAVVKFDK--EGVYGFKCAP 80 (123)
T ss_dssp TCEEEEECSS-S-SCCCEECTTSSC--TTCCCCBCCTTSCEEEECCS--CEEEEEECST
T ss_pred CCEEEEEECC-C-CcEEEEecccCC--CCccceecCCCCEEEEEeCC--CeEEEEEeCC
Confidence 4468888875 3 4566654 111 11112245799999999964 3778899986
No 55
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=25.85 E-value=2e+02 Score=24.42 Aligned_cols=29 Identities=3% Similarity=-0.103 Sum_probs=21.8
Q ss_pred ceecCCCCeEEEEEecC-CCCceeEEEEeE
Q 043453 59 EHVPSPNQSYSFSFHDK-LFGQTLFYCSFK 87 (134)
Q Consensus 59 ~~~L~~g~~~~f~F~~~-~~~~T~f~C~f~ 87 (134)
...+.||++|.+.|... --|+-.|.|+..
T Consensus 146 ~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~ 175 (612)
T 2g23_A 146 DNAVGFGDAQLSEYPNDHQATQWWYHDHAM 175 (612)
T ss_dssp GGCBCTTCEEEEEECCCSCSCEEEEEECCT
T ss_pred cCCCCCCCeEEEEEEecCCCceEEEecccC
Confidence 34689999999999864 356666778874
No 56
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=25.76 E-value=49 Score=22.29 Aligned_cols=26 Identities=31% Similarity=0.514 Sum_probs=20.2
Q ss_pred ecCCCCeEEEEEecC--CCC-ceeEEEEe
Q 043453 61 VPSPNQSYSFSFHDK--LFG-QTLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~--~~~-~T~f~C~f 86 (134)
.|.||++++..|... --| +=.|+|++
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~~ 113 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCSF 113 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECCS
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECC
Confidence 479999999999854 235 37799997
No 57
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=25.28 E-value=47 Score=22.35 Aligned_cols=26 Identities=31% Similarity=0.521 Sum_probs=20.1
Q ss_pred ecCCCCeEEEEEecC--CCCc-eeEEEEe
Q 043453 61 VPSPNQSYSFSFHDK--LFGQ-TLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~--~~~~-T~f~C~f 86 (134)
.|.||++++..|... --|. =.|+|++
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~ 114 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCSF 114 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECCS
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECC
Confidence 479999999999864 1344 7799987
No 58
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=24.23 E-value=87 Score=24.84 Aligned_cols=55 Identities=11% Similarity=0.204 Sum_probs=35.2
Q ss_pred eEEEEEeCCCC-CCeeEEEeceeCCCCCcc--eecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 31 RVVMITNNTSE-GRFDLTVHCKSKDDDVGE--HVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 31 ~~V~I~N~l~~-~~~~L~vhC~Skd~DlG~--~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
..|+++|.++. ....+..|--. ..|-+. ..+.||+.|++.|..+--|+-.|.|+.
T Consensus 205 v~~rl~N~~~~~~~~~ih~Hg~~-~~DG~~~~~~i~pG~~~~~~~~~~~~G~~~yh~h~ 262 (447)
T 2dv6_A 205 VELHLKNHKDSLMVHSVDFHGAT-GPGGAAAFTQTDPGEETVVTFKALIPGIYVYHCAT 262 (447)
T ss_dssp EEEEEEECTTCSSCBCCEETTCC-SGGGGGGGCCBCTTCEEEEEEECCSCEEEEEECCS
T ss_pred EEEEEEeCCCCceeEEEeecccc-CCCCCCccEEeCCCCEEEEEEECCCCeEEEEEeCC
Confidence 45888999841 23556666432 122222 248999999999986544666677875
No 59
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=24.18 E-value=83 Score=28.56 Aligned_cols=44 Identities=14% Similarity=0.233 Sum_probs=30.3
Q ss_pred eEEEEEeCCCCCCeeEEEeceeCC--------CC--Cc----ceecCCCCeEEEEEecC
Q 043453 31 RVVMITNNTSEGRFDLTVHCKSKD--------DD--VG----EHVPSPNQSYSFSFHDK 75 (134)
Q Consensus 31 ~~V~I~N~l~~~~~~L~vhC~Skd--------~D--lG----~~~L~~g~~~~f~F~~~ 75 (134)
..|+++|.| +....|..|=-.-. .| -| ...++||++|.+.|...
T Consensus 105 v~v~v~N~l-~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~ 162 (1065)
T 2j5w_A 105 VYVHLKNLA-SRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLAT 162 (1065)
T ss_dssp EEEEEEEES-SSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECC
T ss_pred EEEEEEECC-CCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEec
Confidence 458899999 44567777764321 11 12 25689999999999865
No 60
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=23.18 E-value=47 Score=23.60 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=20.7
Q ss_pred ecCCCCeEEEEEecC--CCCceeEEEEe
Q 043453 61 VPSPNQSYSFSFHDK--LFGQTLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~--~~~~T~f~C~f 86 (134)
.|.||++++..|... --|+=.|+|++
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~ 152 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTF 152 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCS
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCC
Confidence 579999999999743 24778899997
No 61
>3lim_A Fragaceatoxin C; pore forming toxin, actinoporins; HET: LDA; 1.80A {Actinia fragacea} PDB: 3zwj_A 3zwg_A 1kd6_A 1iaz_A 1tzq_A
Probab=22.08 E-value=1.9e+02 Score=20.95 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=35.6
Q ss_pred CceEEEEEeCCCCCCeeEEEeceeCCCCCcce-ecCCCCeEEEEEecC
Q 043453 29 PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEH-VPSPNQSYSFSFHDK 75 (134)
Q Consensus 29 ~k~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~-~L~~g~~~~f~F~~~ 75 (134)
.+..|+|.|.-..-=..+.+.+.|..-|...+ .++|...-.+.|+..
T Consensus 30 Rk~~IeI~N~T~~~l~~p~vY~~SG~~~~pl~p~V~p~~a~~~~f~K~ 77 (178)
T 3lim_A 30 RKIAVGIDNESGKTWTAMNTYFRSGTSDIVLPHKVAHGKALLYNGQKN 77 (178)
T ss_dssp SEEEEEEEEESSSCEEEEEEEEEECBCCSCCCCEECTTEEEEEEEECC
T ss_pred eEEEEEEEeCCCCeeecceEEEecCccccCCCcccCcccceeEEEecC
Confidence 56789999987321245889999988777766 678888888888864
No 62
>1gwy_A Sticholysin II; cytolysin, pore-forming toxin, hemolysis, cnidocyst; 1.71A {Stoichactis helianthus} SCOP: b.97.1.1 PDB: 1o71_A 1o72_A* 2ks3_A 2l38_A 2l2b_A 2ks4_A
Probab=21.95 E-value=1.8e+02 Score=20.97 Aligned_cols=47 Identities=19% Similarity=0.088 Sum_probs=35.4
Q ss_pred CceEEEEEeCCCCCCeeEEEeceeCCCCCcce-ecCCCCeEEEEEecC
Q 043453 29 PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEH-VPSPNQSYSFSFHDK 75 (134)
Q Consensus 29 ~k~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~-~L~~g~~~~f~F~~~ 75 (134)
.+..|.|.|+-..-=..+.+.++|..-|.... .++|...-.+.|+..
T Consensus 29 Rki~I~i~N~T~~~~~~~~vy~~SG~~~~~l~~~V~~~~a~~~~~~K~ 76 (175)
T 1gwy_A 29 RKIAVGIDNESGGTWTALNAYFRSGTTDVILPEFVPNTKALLYSGRKD 76 (175)
T ss_dssp SEEEEEEEEESSSCEEEEEEEEEESBCSSCCCSEECTTEEEEEEEECC
T ss_pred eeEEEEEecCCCCEEecceEEEecCcccCCCCcccCcccceeeEEecC
Confidence 46779999987222245899999987666554 788888888899865
No 63
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=21.72 E-value=61 Score=21.78 Aligned_cols=26 Identities=31% Similarity=0.540 Sum_probs=19.6
Q ss_pred ecCCCCeEEEEEecC--CCCc-eeEEEEe
Q 043453 61 VPSPNQSYSFSFHDK--LFGQ-TLFYCSF 86 (134)
Q Consensus 61 ~L~~g~~~~f~F~~~--~~~~-T~f~C~f 86 (134)
.|.||++++..|... --|. =.|+|++
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~ 114 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSF 114 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCS
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCC
Confidence 479999999999854 1233 6799987
No 64
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=20.94 E-value=1.9e+02 Score=19.07 Aligned_cols=55 Identities=15% Similarity=0.214 Sum_probs=32.8
Q ss_pred CceEEEEEeCCCCCCeeEEEeceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEeE
Q 043453 29 PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSFK 87 (134)
Q Consensus 29 ~k~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 87 (134)
+.-+|+++|.- . ++.+..+=....+....-.+.||++|++.|.. -|.=.|.|...
T Consensus 27 ~GdtV~f~~~~-~-~H~v~~~~~~~P~g~~~f~~~pg~t~s~TF~~--pG~y~y~C~~H 81 (123)
T 3erx_A 27 PGDVINFVPTD-K-SHNVEAIKEILPEGVESFKSKINESYTLTVTE--PGLYGVKCTPH 81 (123)
T ss_dssp TTEEEEEEESS-T-TCCCEECTTSSCTTCCCCBCCTTCCEEEEECS--CEEEEEECGGG
T ss_pred CCCEEEEEECC-C-CceEEEcCCcCCCCccceecCCCCEEEEEeCC--CeEEEEEeCCC
Confidence 44578888875 3 35555431000111112235789999999964 37888999963
No 65
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=20.17 E-value=1.9e+02 Score=18.87 Aligned_cols=54 Identities=15% Similarity=0.191 Sum_probs=32.4
Q ss_pred CceEEEEEeCCCCCCeeEEEeceeCCCCCcceecCCCCeEEEEEecCCCCceeEEEEe
Q 043453 29 PKRVVMITNNTSEGRFDLTVHCKSKDDDVGEHVPSPNQSYSFSFHDKLFGQTLFYCSF 86 (134)
Q Consensus 29 ~k~~V~I~N~l~~~~~~L~vhC~Skd~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 86 (134)
+.-+|++.|.= . ++.+.+.=-.-.+.-..-.+.+|+++++.|... |.=.|.|..
T Consensus 27 ~GdtV~f~n~d-~-~H~v~~~~~~~p~~~~~~~~~~g~t~~~tF~~~--G~y~y~C~~ 80 (122)
T 2ux6_A 27 PGDTVTFIPTD-K-GHNVETIKGMIPDGAEAFKSKINENYKVTFTAP--GVYGVKCTP 80 (122)
T ss_dssp TTEEEEEEESS-S-SCCCEECTTCSCTTCCCCBCCTTCCEEEEECSC--EEEEEEETT
T ss_pred CCCEEEEEECC-C-CcEEEEcccccCCCcceeecCCCCEEEEEeCCC--EEEEEEeCC
Confidence 34578898875 3 455554310000111112457899999999643 778899987
Done!