Your job contains 1 sequence.
>043456
MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN
KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN
DEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL
INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
CAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND
SWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCS
NCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVL
QPFMGGKTFLPFKAKPAPEAKGKKSKA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043456
(447 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146400 - symbol:AT5G27470 species:3702 "Arabi... 1779 2.2e-183 1
DICTYBASE|DDB_G0272660 - symbol:serS "seryl-tRNA syntheta... 1229 4.3e-125 1
POMBASE|SPAC29A4.15 - symbol:SPAC29A4.15 "cytoplasmic ser... 1163 4.2e-118 1
ZFIN|ZDB-GENE-040831-1 - symbol:sars "seryl-tRNA syntheta... 965 4.3e-113 2
CGD|CAL0004049 - symbol:SES1 species:5476 "Candida albica... 1109 2.2e-112 1
UNIPROTKB|Q5AEJ9 - symbol:SES1 "Potential serine tRNA syn... 1109 2.2e-112 1
WB|WBGene00005663 - symbol:sars-1 species:6239 "Caenorhab... 952 2.7e-111 2
SGD|S000002430 - symbol:SES1 "Cytosolic seryl-tRNA synthe... 1093 1.1e-110 1
RGD|628813 - symbol:Sars "seryl-tRNA synthetase" species:... 956 2.4e-110 2
UNIPROTKB|Q6P799 - symbol:Sars "Serine--tRNA ligase, cyto... 956 2.4e-110 2
MGI|MGI:102809 - symbol:Sars "seryl-aminoacyl-tRNA synthe... 955 2.4e-110 2
UNIPROTKB|Q9GMB8 - symbol:SARS "Serine--tRNA ligase, cyto... 950 2.1e-109 2
UNIPROTKB|Q5T5C7 - symbol:SARS "Serine--tRNA ligase, cyto... 828 2.7e-109 3
UNIPROTKB|E2R4D5 - symbol:SARS "Uncharacterized protein" ... 952 5.6e-109 2
ASPGD|ASPL0000077121 - symbol:AN8867 species:162425 "Emer... 1074 1.1e-108 1
UNIPROTKB|P49591 - symbol:SARS "Serine--tRNA ligase, cyto... 946 1.2e-108 2
UNIPROTKB|F1S5Z3 - symbol:SARS "Uncharacterized protein" ... 944 1.9e-108 2
FB|FBgn0031497 - symbol:CG17259 species:7227 "Drosophila ... 919 5.1e-106 2
GENEDB_PFALCIPARUM|PF07_0073 - symbol:PF07_0073 "seryl-tR... 468 2.0e-85 3
UNIPROTKB|Q8IBS3 - symbol:PF07_0073 "Seryl-tRNA synthetas... 468 2.0e-85 3
TIGR_CMR|BA_0012 - symbol:BA_0012 "seryl-tRNA synthetase"... 702 3.0e-69 1
TIGR_CMR|CHY_2697 - symbol:CHY_2697 "seryl-tRNA synthetas... 686 1.5e-67 1
TIGR_CMR|GSU_0037 - symbol:GSU_0037 "seryl-tRNA synthetas... 656 2.3e-64 1
UNIPROTKB|P67561 - symbol:serS "Serine--tRNA ligase" spec... 638 1.8e-62 1
UNIPROTKB|Q9KSZ6 - symbol:serS "Serine--tRNA ligase" spec... 638 1.8e-62 1
TIGR_CMR|VC_1110 - symbol:VC_1110 "seryl-tRNA synthetase"... 638 1.8e-62 1
UNIPROTKB|P0A8L1 - symbol:serS "seryl-tRNA synthetase" sp... 633 6.2e-62 1
TIGR_CMR|SO_2310 - symbol:SO_2310 "seryl-tRNA synthetase"... 628 2.1e-61 1
TAIR|locus:2008865 - symbol:SRS "Seryl-tRNA synthetase" s... 613 8.1e-60 1
TIGR_CMR|CPS_2755 - symbol:CPS_2755 "seryl-tRNA synthetas... 597 4.0e-58 1
TIGR_CMR|DET_0577 - symbol:DET_0577 "seryl-tRNA synthetas... 595 6.6e-58 1
TIGR_CMR|CBU_1188 - symbol:CBU_1188 "seryl-tRNA synthetas... 587 4.6e-57 1
TIGR_CMR|NSE_0569 - symbol:NSE_0569 "seryl-tRNA synthetas... 579 3.3e-56 1
TIGR_CMR|APH_0427 - symbol:APH_0427 "seryl-tRNA synthetas... 548 6.3e-53 1
TIGR_CMR|ECH_0584 - symbol:ECH_0584 "seryl-tRNA synthetas... 541 3.5e-52 1
TIGR_CMR|CJE_0438 - symbol:CJE_0438 "seryl-tRNA synthetas... 537 9.2e-52 1
TIGR_CMR|SPO_2325 - symbol:SPO_2325 "seryl-tRNA synthetas... 528 8.3e-51 1
ZFIN|ZDB-GENE-040426-1616 - symbol:sars2 "seryl-tRNA synt... 473 7.7e-48 2
DICTYBASE|DDB_G0267604 - symbol:mserS "serine-tRNA ligase... 414 9.8e-48 2
CGD|CAL0002761 - symbol:orf19.1201 species:5476 "Candida ... 472 7.1e-45 1
RGD|1309456 - symbol:Sars2 "seryl-tRNA synthetase 2, mito... 442 1.1e-41 1
UNIPROTKB|G8JKV4 - symbol:SARS2 "Serine--tRNA ligase, mit... 438 2.8e-41 1
UNIPROTKB|Q9N0F3 - symbol:SARS2 "Serine--tRNA ligase, mit... 438 2.8e-41 1
MGI|MGI:1919234 - symbol:Sars2 "seryl-aminoacyl-tRNA synt... 434 7.5e-41 1
UNIPROTKB|Q9NP81 - symbol:SARS2 "Serine--tRNA ligase, mit... 427 4.2e-40 1
UNIPROTKB|E7EX87 - symbol:SARS2 "Serine--tRNA ligase, mit... 423 1.1e-39 1
UNIPROTKB|E2QUT6 - symbol:FBXO17 "Uncharacterized protein... 422 1.4e-39 1
FB|FBgn0021750 - symbol:Aats-ser "Seryl-tRNA synthetase" ... 421 1.8e-39 1
SGD|S000001053 - symbol:DIA4 "Probable mitochondrial sery... 420 2.3e-39 1
POMBASE|SPAC25B8.06c - symbol:SPAC25B8.06c "mitochondrial... 394 1.3e-36 1
GENEDB_PFALCIPARUM|PFL0770w - symbol:PFL0770w "seryl-tRNA... 380 1.2e-34 1
UNIPROTKB|Q8I5P7 - symbol:PFL0770w "Serine--tRNA ligase, ... 380 1.2e-34 1
ASPGD|ASPL0000036378 - symbol:sgdB species:162425 "Emeric... 373 2.2e-34 1
WB|WBGene00005662 - symbol:sars-2 species:6239 "Caenorhab... 355 1.8e-32 1
UNIPROTKB|H9KYV2 - symbol:SARS "Uncharacterized protein" ... 276 5.1e-24 1
UNIPROTKB|F1RI32 - symbol:FBXO17 "Uncharacterized protein... 285 5.0e-23 1
UNIPROTKB|Q58CS4 - symbol:SARS2 "Seryl-tRNA synthetase 2"... 146 1.7e-07 1
FB|FBgn0051133 - symbol:Slimp "Seryl-tRNA synthetase-like... 135 7.2e-06 1
>TAIR|locus:2146400 [details] [associations]
symbol:AT5G27470 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=ISS;IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006499 "N-terminal protein myristoylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005829 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 EMBL:AC007123
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 OMA:KSIGEKM GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 EMBL:Z70313
EMBL:AF360352 EMBL:AY051054 IPI:IPI00523287 PIR:S71293
RefSeq:NP_198099.1 UniGene:At.24387 ProteinModelPortal:Q39230
SMR:Q39230 STRING:Q39230 PaxDb:Q39230 PRIDE:Q39230 DNASU:832806
EnsemblPlants:AT5G27470.1 GeneID:832806 KEGG:ath:AT5G27470
GeneFarm:2446 TAIR:At5g27470 InParanoid:Q39230 PhylomeDB:Q39230
ProtClustDB:PLN02678 Genevestigator:Q39230 GermOnline:AT5G27470
Uniprot:Q39230
Length = 451
Score = 1779 (631.3 bits), Expect = 2.2e-183, P = 2.2e-183
Identities = 331/433 (76%), Positives = 381/433 (87%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDINLFREEKG PE IRESQRRRFASV++VDEII LDK+WRQ QF+V+++RKE NK+N
Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
KQ+AQLK+ +D SE++ +T + KQ S KE EVREA+AA+KAKLE VGNLVHDSVPV
Sbjct: 61 KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK 120
Query: 121 DEANNAIVRTWGEKR-TEP--KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
DEANN +++ WGEKR + P KLKNHV+LVELLGIAD K+GA+IAG RGF+LKGDG+ LN
Sbjct: 121 DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN 180
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
QALINFGL FL+K+ +T L PFFMRK+VMAKCAQLAQFDEELYKVTGEGDDKYLIATAE
Sbjct: 181 QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 240
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
QPLCAYHID+WIHP+ELP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT PN
Sbjct: 241 QPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN 300
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELV 357
N SW+M +EM+KNSE+FYQ LK+PYQ+V+IVSG WFP+S+T+RELV
Sbjct: 301 ENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELV 360
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVP 417
SCSNCTDYQ+RRLEIRYGQKKSNEQTKQYVH+LNSTLTATERTICCILENYQ+EDGV++P
Sbjct: 361 SCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIP 420
Query: 418 EVLQPFMGGKTFL 430
EVLQPFMGG+TFL
Sbjct: 421 EVLQPFMGGETFL 433
>DICTYBASE|DDB_G0272660 [details] [associations]
symbol:serS "seryl-tRNA synthetase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA;ISS]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic process"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 dictyBase:DDB_G0272660 GO:GO:0005524 GO:GO:0045335
GenomeReviews:CM000151_GR EMBL:AAFI02000008 eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
RefSeq:XP_644993.1 HSSP:Q9N0F3 ProteinModelPortal:Q7KWQ2
STRING:Q7KWQ2 PRIDE:Q7KWQ2 EnsemblProtists:DDB0231305
GeneID:8618670 KEGG:ddi:DDB_G0272660 OMA:EESWEWH
ProtClustDB:CLSZ2496096 Uniprot:Q7KWQ2
Length = 451
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 235/429 (54%), Positives = 303/429 (70%)
Query: 2 LDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINK 61
LDI LFR +KGG P+ IR+SQ+ R+A+VD V E+I LDK ++ ++ ++N E K+NK
Sbjct: 3 LDIVLFRADKGGNPDLIRQSQKVRYANVDAVQEVIDLDKVVKETKYRLDNTNAEYAKLNK 62
Query: 62 QIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSND 121
+A K +G+ E++ + E+ Q + EV E ++ KL +GN+VH+SVP+ N+
Sbjct: 63 SVAMKKKAGESADEIIAQAEELNQSIIKLKAEVSEVELLLRKKLRPIGNIVHESVPIDNN 122
Query: 122 EANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALI 181
E NN I++TWGE +T L +H EL+E++ D ++G ++G R ++LKG GV LNQA+I
Sbjct: 123 EDNNQIIKTWGECKTSEGLLHHHELLEMIDGYDPERGTLVSGHRCYFLKGIGVLLNQAII 182
Query: 182 NFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 241
NF L + K+ L TPFFM K+VMAK AQL QFD+ELYKVTG+ ++KYLIAT+EQP+
Sbjct: 183 NFALMHMTKRGSVPLQTPFFMNKDVMAKTAQLEQFDDELYKVTGDNEEKYLIATSEQPIS 242
Query: 242 AYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDS 301
A+H D+WI +LP +Y GYS+CFRKEAGSHGRDT GIFRVHQFEK+EQFCIT P S
Sbjct: 243 AFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFCITEPE--KS 300
Query: 302 WDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSN 361
WDM EEMI NSE+FYQ L IPY+VV IVSG WFP YRELVSCSN
Sbjct: 301 WDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNQYRELVSCSN 360
Query: 362 CTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQ 421
CTDYQSR LEIR G KK +Q K+YVH+LNSTL AT R ICCILENYQ E G+ VP L+
Sbjct: 361 CTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGITVPVPLR 420
Query: 422 PFMGGKTFL 430
P++G K F+
Sbjct: 421 PYLG-KDFI 428
>POMBASE|SPAC29A4.15 [details] [associations]
symbol:SPAC29A4.15 "cytoplasmic serine-tRNA ligase Srs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002181
"cytoplasmic translation" evidence=NAS] [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 PomBase:SPAC29A4.15 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0002181 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH PIR:T38474 RefSeq:NP_594867.1
ProteinModelPortal:O14018 STRING:O14018 PRIDE:O14018
EnsemblFungi:SPAC29A4.15.1 GeneID:2542163 KEGG:spo:SPAC29A4.15
OrthoDB:EOG425922 NextBio:20803235 Uniprot:O14018
Length = 450
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 233/439 (53%), Positives = 304/439 (69%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDINLF+ EKGG PE IRESQR+R A V +VD++I + K+W L+F+++N K +N++
Sbjct: 1 MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60
Query: 61 KQIAQLKLSGK-DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVV---GNLVHDSV 116
K+I LK+ K D SE++ + N + ++ K+ + + A K L VV GN+VHDSV
Sbjct: 61 KEIG-LKMKAKEDASELLEEKNSLTER---KKNLIEQETAKNKEMLNVVSSIGNIVHDSV 116
Query: 117 PVSNDEANNAIVRTWGEKRTEPKLKN---HVELVELLGIADLKKGADIAGGRGFYLKGDG 173
PVS DE NN I+R W + + KN H E++ L D ++G ++G RG++L+ G
Sbjct: 117 PVSMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYG 176
Query: 174 VRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLI 233
V N ALI +GLDFLEK+ Y L P + K+VMAK AQL QFDEELYKV +++YLI
Sbjct: 177 VFFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGDEERYLI 236
Query: 234 ATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
AT+EQP+ AYH +W PSE LP++YAGYS+C+R+EAGSHGRD GIFRVH FEK+EQF
Sbjct: 237 ATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQF 296
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQ 351
+T P SW+ EMI ++E+FY+ L++PY++VAIVSG WFP
Sbjct: 297 VLTDPE--KSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQG 354
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
Y+ELVSCSNCTDYQSR LEIR G KK ++ K+YVH LNSTL ATER +CCILENYQ
Sbjct: 355 EYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTP 414
Query: 412 DGVEVPEVLQPFMGGKTFL 430
DGV VP+VLQP+MGGKTFL
Sbjct: 415 DGVNVPKVLQPYMGGKTFL 433
>ZFIN|ZDB-GENE-040831-1 [details] [associations]
symbol:sars "seryl-tRNA synthetase" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IMP] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 ZFIN:ZDB-GENE-040831-1 GO:GO:0005524 GO:GO:0005737
GO:GO:0001569 EMBL:AL954678 eggNOG:COG0172 HOGENOM:HOG000035937
SUPFAM:SSF46589 CTD:6301 GeneTree:ENSGT00660000095591
HOVERGEN:HBG023172 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
EMBL:BC081608 EMBL:AY648839 EMBL:AB453157 IPI:IPI00632609
RefSeq:NP_001003882.1 UniGene:Dr.32657 STRING:Q6DRC0
Ensembl:ENSDART00000003296 GeneID:445405 KEGG:dre:445405
InParanoid:Q6DRC0 NextBio:20832109 Uniprot:Q6DRC0
Length = 515
Score = 965 (344.8 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 188/330 (56%), Positives = 236/330 (71%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE A+N + RTWG+ + K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDADNKVERTWGDCTVQKKY-SHVDLVVMVDGYEGEKGAIVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALIN+ L L K+Y LL+TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGPLVFLEQALINYALRILYSKNYNLLYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A+ D+W+ P ELPIRYAG S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDNTVDEKYLIATSEQPIAAFLRDEWLKPEELPIRYAGLSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF SP+ SW+M +EMI +E FYQ L IPY++V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAESFYQTLGIPYRIVNIVSGALN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP SQ +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSQAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKAEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT R IC ILEN+Q E+G+ VPE L+ FM
Sbjct: 431 CATTRVICAILENFQTEEGIIVPEPLKAFM 460
Score = 171 (65.3 bits), Expect = 4.3e-113, Sum P(2) = 4.3e-113
Identities = 40/123 (32%), Positives = 72/123 (58%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG PE IRE+QR+RF V LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRTDKGGDPEIIRETQRKRFKDVSLVDKLVQADTEWRKCRFTADNLNKAKNLCS 61
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKA-KLEVVGNLVHDSVPVS 119
K I + K+ K E V + + +++ + E E + + +++ V LV ++V +
Sbjct: 62 KSIGE-KMKKK---EPVGDDDTLPEEAQNLEALTAETLSPLTVTQIKKVRVLVDEAVQKT 117
Query: 120 NDE 122
+ +
Sbjct: 118 DSD 120
>CGD|CAL0004049 [details] [associations]
symbol:SES1 species:5476 "Candida albicans" [GO:0004828
"serine-tRNA ligase activity" evidence=IGI;ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 CGD:CAL0004049 GO:GO:0005524 GO:GO:0005737
EMBL:AACQ01000027 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 RefSeq:XP_719967.1 ProteinModelPortal:Q5AEJ9
STRING:Q5AEJ9 GeneID:3638415 KEGG:cal:CaO19.269 Uniprot:Q5AEJ9
Length = 458
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 229/437 (52%), Positives = 299/437 (68%)
Query: 7 FREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQL 66
F ++GG PE I+ SQ++R SV+LVDEII+ K+W +L+FD++ + K+LN + K+I +
Sbjct: 3 FSLKRGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKR 62
Query: 67 KLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAA--VKAKLEVVGNLVHDSVPVSNDEAN 124
+ +D +++ + ++ + KE+ +EA A +++K+ VGN+VH+SV S DE N
Sbjct: 63 FKAKEDAKDLIAEKEKLSNEK--KEIIEKEAEADKNLRSKINQVGNIVHESVVDSQDEEN 120
Query: 125 NAIVRTW---GEKRTE--------P-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGD 172
N +VRTW K+ E P KL +H L+ L G D ++G I G RG++L+
Sbjct: 121 NELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGY-DPERGVRIVGHRGYFLRNY 179
Query: 173 GVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYL 232
GV LNQALIN+GL FL K Y L P M KEVMAK AQL+QFDEELYKV D+KYL
Sbjct: 180 GVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEKYL 239
Query: 233 IATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQ 290
IAT+EQP+ AYH +W P+E LP+RYAGYSSCFR+EAGSHG+D GIFRVH FEK+EQ
Sbjct: 240 IATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQ 299
Query: 291 FCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPAS 350
F +T P SW+ + MI SEEFYQ L +PY+VV IVSG WFP
Sbjct: 300 FVLTEPE--KSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQ 357
Query: 351 QTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQK 410
Q Y+ELVSCSNCTDYQSR LEIR G K+ N+Q K+YVH LNSTL+ATERTICCILENYQK
Sbjct: 358 QEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQK 417
Query: 411 EDGVEVPEVLQPFMGGK 427
EDG+ +PEVL+ ++ G+
Sbjct: 418 EDGLVIPEVLRKYIPGE 434
>UNIPROTKB|Q5AEJ9 [details] [associations]
symbol:SES1 "Potential serine tRNA synthetase"
species:237561 "Candida albicans SC5314" [GO:0004828 "serine-tRNA
ligase activity" evidence=IGI;ISS] InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 CGD:CAL0004049 GO:GO:0005524
GO:GO:0005737 EMBL:AACQ01000027 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 RefSeq:XP_719967.1 ProteinModelPortal:Q5AEJ9
STRING:Q5AEJ9 GeneID:3638415 KEGG:cal:CaO19.269 Uniprot:Q5AEJ9
Length = 458
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 229/437 (52%), Positives = 299/437 (68%)
Query: 7 FREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQL 66
F ++GG PE I+ SQ++R SV+LVDEII+ K+W +L+FD++ + K+LN + K+I +
Sbjct: 3 FSLKRGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKR 62
Query: 67 KLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAA--VKAKLEVVGNLVHDSVPVSNDEAN 124
+ +D +++ + ++ + KE+ +EA A +++K+ VGN+VH+SV S DE N
Sbjct: 63 FKAKEDAKDLIAEKEKLSNEK--KEIIEKEAEADKNLRSKINQVGNIVHESVVDSQDEEN 120
Query: 125 NAIVRTW---GEKRTE--------P-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGD 172
N +VRTW K+ E P KL +H L+ L G D ++G I G RG++L+
Sbjct: 121 NELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGY-DPERGVRIVGHRGYFLRNY 179
Query: 173 GVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYL 232
GV LNQALIN+GL FL K Y L P M KEVMAK AQL+QFDEELYKV D+KYL
Sbjct: 180 GVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDGEDEKYL 239
Query: 233 IATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQ 290
IAT+EQP+ AYH +W P+E LP+RYAGYSSCFR+EAGSHG+D GIFRVH FEK+EQ
Sbjct: 240 IATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQ 299
Query: 291 FCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPAS 350
F +T P SW+ + MI SEEFYQ L +PY+VV IVSG WFP
Sbjct: 300 FVLTEPE--KSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLEAWFPFQ 357
Query: 351 QTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQK 410
Q Y+ELVSCSNCTDYQSR LEIR G K+ N+Q K+YVH LNSTL+ATERTICCILENYQK
Sbjct: 358 QEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCILENYQK 417
Query: 411 EDGVEVPEVLQPFMGGK 427
EDG+ +PEVL+ ++ G+
Sbjct: 418 EDGLVIPEVLRKYIPGE 434
>WB|WBGene00005663 [details] [associations]
symbol:sars-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0009792 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 EMBL:Z68882 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 SUPFAM:SSF46589 GeneTree:ENSGT00660000095591
KO:K01875 OMA:KSIGEKM GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 PIR:T20008
RefSeq:NP_501804.1 ProteinModelPortal:Q18678 SMR:Q18678
IntAct:Q18678 STRING:Q18678 PaxDb:Q18678 PRIDE:Q18678
EnsemblMetazoa:C47E12.1.1 EnsemblMetazoa:C47E12.1.2 GeneID:177859
KEGG:cel:CELE_C47E12.1 UCSC:C47E12.1.1 CTD:177859 WormBase:C47E12.1
InParanoid:Q18678 NextBio:898694 Uniprot:Q18678
Length = 487
Score = 952 (340.2 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 196/385 (50%), Positives = 260/385 (67%)
Query: 62 QIAQLKLSGKDFSEM-VTKTNEIKQQSADKEVEVREAWAAVK----AKLEVVGNLVHDSV 116
++A+LK+ + S++ V + +++ +K V+ A A + KL +GNL+H SV
Sbjct: 87 RLAELKID--ELSQLTVVQLKKLRVLVDEKSVQTAAAVIANENARHEKLIQIGNLIHSSV 144
Query: 117 PVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRL 176
VS DEANN I RT+G+ T+ K +HV+LV ++ D ++G +AGGRG++LKG V L
Sbjct: 145 VVSKDEANNKIERTFGDLSTKKKY-SHVDLVVMVDGFDGERGTVVAGGRGYFLKGPLVFL 203
Query: 177 NQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEG--------- 227
QA+I L L K Y L+TPFFMRKEVM + AQL+QFD+ELYKV+ +G
Sbjct: 204 EQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQLSQFDDELYKVSSKGSEIAGDTSV 263
Query: 228 DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
D+KYLIAT+EQP+ AYH ++WI +ELPI+YAG S+CFR+E GSHGRDT GIFRVHQFEK
Sbjct: 264 DEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTCFRQEVGSHGRDTRGIFRVHQFEK 323
Query: 288 VEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWF 347
+EQF + SPN N+SW + +EMI N+E +YQ L+IPYQVV IVSG WF
Sbjct: 324 IEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQVVNIVSGELNNAAAKKFDLEAWF 383
Query: 348 PASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILEN 407
P S YRELVSCSNC DYQSRRL++RYGQ K +VH+LN+T+ AT R IC ILEN
Sbjct: 384 PGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEVPFVHMLNATMCATTRVICAILEN 443
Query: 408 YQKEDGVEVPEVLQPFM--GGKTFL 430
Q E+G+ VP +Q +M +TF+
Sbjct: 444 NQTEEGINVPTAIQQWMPENYRTFI 468
Score = 167 (63.8 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LDI++FR EKGG PE IR+SQ+ RF LVDE+I LD+KWR+ +F + ++ N I+
Sbjct: 2 VLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAIS 61
Query: 61 KQIAQLKLSGKD 72
K I + K+ K+
Sbjct: 62 KAIGE-KMKKKE 72
>SGD|S000002430 [details] [associations]
symbol:SES1 "Cytosolic seryl-tRNA synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0097056 "selenocysteinyl-tRNA(Sec)
biosynthetic process" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA;IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 SGD:S000002430 GO:GO:0005524 GO:GO:0005737
EMBL:BK006938 EMBL:X95966 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 EMBL:Z47814 EMBL:L15408 SUPFAM:SSF46589
GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OrthoDB:EOG425922 EMBL:X04884 EMBL:Z74319
PIR:S50930 RefSeq:NP_010306.1 ProteinModelPortal:P07284 SMR:P07284
DIP:DIP-5181N IntAct:P07284 MINT:MINT-513156 STRING:P07284
PaxDb:P07284 PeptideAtlas:P07284 PRIDE:P07284 EnsemblFungi:YDR023W
GeneID:851587 KEGG:sce:YDR023W CYGD:YDR023w NextBio:969063
Genevestigator:P07284 GermOnline:YDR023W Uniprot:P07284
Length = 462
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 226/441 (51%), Positives = 290/441 (65%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDIN F E+KGG PE IR+SQ+ R ASV++VDEIIS K W + +F+++ K+ NK+
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 61 KQIAQLKLSGK-DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVS 119
K I LK K D S ++ + ++ QQ + + ++ +K K+ VGN+VH SV VS
Sbjct: 61 KDIG-LKFKNKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVS 119
Query: 120 NDEANNAIVRTWGEKRTE-----------PKLKNHVELVELLGIADLKKGADIAGGRGFY 168
NDE NN +VRTW + E P +H E++ L D +G I G RG++
Sbjct: 120 NDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYF 179
Query: 169 LKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGD 228
+ GV LNQALIN+GL FL K Y L P M KE+M+K AQL++FDEELYKV D
Sbjct: 180 FRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVIDGED 239
Query: 229 DKYLIATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFE 286
+KYLIAT+EQP+ AYH +W P E LPI Y GYSSCFR+EAGSHG+D G+FRVH FE
Sbjct: 240 EKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFE 299
Query: 287 KVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXW 346
K+EQF IT P SW+ E+MI SEEFY+ LK+PY++V IVSG W
Sbjct: 300 KIEQFVITEPE--KSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357
Query: 347 FPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILE 406
FP + Y+ELVSCSNCTDYQSR LEIR G KK ++ K+YVH LNSTL AT+R +CCILE
Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417
Query: 407 NYQKEDGVEVPEVLQPFMGGK 427
NYQ EDG+ VPEVL+ ++ G+
Sbjct: 418 NYQTEDGLVVPEVLRKYIPGE 438
>RGD|628813 [details] [associations]
symbol:Sars "seryl-tRNA synthetase" species:10116 "Rattus
norvegicus" [GO:0004828 "serine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 RGD:628813 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
CTD:6301 GeneTree:ENSGT00660000095591 HOVERGEN:HBG023172 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:Q9N0F3 EMBL:BC061765 EMBL:AY145052
IPI:IPI00391119 RefSeq:NP_001007607.1 UniGene:Rn.73067
ProteinModelPortal:Q6P799 IntAct:Q6P799 STRING:Q6P799 PRIDE:Q6P799
Ensembl:ENSRNOT00000033015 GeneID:266975 KEGG:rno:266975
UCSC:RGD:628813 NextBio:624745 ArrayExpress:Q6P799
Genevestigator:Q6P799 Uniprot:Q6P799
Length = 512
Score = 956 (341.6 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 186/330 (56%), Positives = 234/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG+S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M +EMI +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 431 CATTRTICAILENYQTEKGIVVPEKLREFM 460
Score = 154 (59.3 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 39/123 (31%), Positives = 69/123 (56%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVK-AKLEVVGNLVHDSVPVS 119
K I + K+ K E V + I + + + + AA+K ++++ V LV +++
Sbjct: 62 KTIGE-KMKKK---EPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKC 117
Query: 120 NDE 122
+ E
Sbjct: 118 DGE 120
>UNIPROTKB|Q6P799 [details] [associations]
symbol:Sars "Serine--tRNA ligase, cytoplasmic"
species:10116 "Rattus norvegicus" [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 RGD:628813
GO:GO:0005524 GO:GO:0005737 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 SUPFAM:SSF46589 CTD:6301 GeneTree:ENSGT00660000095591
HOVERGEN:HBG023172 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
EMBL:BC061765 EMBL:AY145052 IPI:IPI00391119 RefSeq:NP_001007607.1
UniGene:Rn.73067 ProteinModelPortal:Q6P799 IntAct:Q6P799
STRING:Q6P799 PRIDE:Q6P799 Ensembl:ENSRNOT00000033015 GeneID:266975
KEGG:rno:266975 UCSC:RGD:628813 NextBio:624745 ArrayExpress:Q6P799
Genevestigator:Q6P799 Uniprot:Q6P799
Length = 512
Score = 956 (341.6 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 186/330 (56%), Positives = 234/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG+S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M +EMI +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 431 CATTRTICAILENYQTEKGIVVPEKLREFM 460
Score = 154 (59.3 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 39/123 (31%), Positives = 69/123 (56%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVK-AKLEVVGNLVHDSVPVS 119
K I + K+ K E V + I + + + + AA+K ++++ V LV +++
Sbjct: 62 KTIGE-KMKKK---EPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKC 117
Query: 120 NDE 122
+ E
Sbjct: 118 DGE 120
>MGI|MGI:102809 [details] [associations]
symbol:Sars "seryl-aminoacyl-tRNA synthetase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 MGI:MGI:102809 GO:GO:0005739 GO:GO:0005524
eggNOG:COG0172 EMBL:AL672200 HOGENOM:HOG000035937 GO:GO:0097056
SUPFAM:SSF46589 CTD:6301 GeneTree:ENSGT00660000095591
HOVERGEN:HBG023172 KO:K01875 OrthoDB:EOG4320Z0 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 ChiTaRS:SARS EMBL:AK075827 EMBL:BC008612
EMBL:M74012 IPI:IPI00469317 RefSeq:NP_001191908.1 UniGene:Mm.28688
ProteinModelPortal:P26638 SMR:P26638 STRING:P26638
PhosphoSite:P26638 REPRODUCTION-2DPAGE:P26638 PaxDb:P26638
PRIDE:P26638 Ensembl:ENSMUST00000090553 GeneID:20226 KEGG:mmu:20226
UCSC:uc008qzb.1 NextBio:297849 Bgee:P26638 CleanEx:MM_SARS
Genevestigator:P26638 GermOnline:ENSMUSG00000068739 Uniprot:P26638
Length = 512
Score = 955 (341.2 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 186/330 (56%), Positives = 233/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M +EMI +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 431 CATTRTICAILENYQAEKGIAVPEKLREFM 460
Score = 155 (59.6 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 38/123 (30%), Positives = 69/123 (56%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVK-AKLEVVGNLVHDSVPVS 119
K I + K+ K E V + + + + +A AA+K ++++ V L+ +++
Sbjct: 62 KTIGE-KMKKK---EAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKC 117
Query: 120 NDE 122
+ E
Sbjct: 118 DGE 120
>UNIPROTKB|Q9GMB8 [details] [associations]
symbol:SARS "Serine--tRNA ligase, cytoplasmic" species:9913
"Bos taurus" [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
EMBL:AF297553 IPI:IPI00705229 RefSeq:NP_776600.1 UniGene:Bt.1552
ProteinModelPortal:Q9GMB8 STRING:Q9GMB8 PRIDE:Q9GMB8
Ensembl:ENSBTAT00000017232 GeneID:281476 KEGG:bta:281476 CTD:6301
GeneTree:ENSGT00660000095591 HOVERGEN:HBG023172 InParanoid:Q9GMB8
KO:K01875 OMA:KSIGEKM OrthoDB:EOG4320Z0 NextBio:20805452
ArrayExpress:Q9GMB8 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 Uniprot:Q9GMB8
Length = 514
Score = 950 (339.5 bits), Expect = 2.1e-109, Sum P(2) = 2.1e-109
Identities = 188/330 (56%), Positives = 233/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+S+DE A+N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISDDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI F L L + YT ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGVLVFLEQALIQFALRTLASRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG----DD-----KYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G DD KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 431 CATTRTICAILENYQTEKGILVPEKLKEFM 460
Score = 151 (58.2 bits), Expect = 2.1e-109, Sum P(2) = 2.1e-109
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRESQ +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD 72
K I + K+ K+
Sbjct: 62 KTIGE-KMKKKE 72
>UNIPROTKB|Q5T5C7 [details] [associations]
symbol:SARS "Serine--tRNA ligase, cytoplasmic" species:9606
"Homo sapiens" [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 EMBL:AL356389
HOGENOM:HOG000035937 SUPFAM:SSF46589 HOVERGEN:HBG023172
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH UniGene:Hs.531176 HGNC:HGNC:10537
ChiTaRS:SARS IPI:IPI00514587 SMR:Q5T5C7 STRING:Q5T5C7
Ensembl:ENST00000369923 Uniprot:Q5T5C7
Length = 536
Score = 828 (296.5 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 167/308 (54%), Positives = 211/308 (68%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE +N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + Y ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQ-KKSNEQTKQYVHLLNST 393
WFP S +RELVSCSNCTDYQ+RRL IRYGQ KK ++ K +HL ST
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKRKNNLHL--ST 428
Query: 394 LTATERTI 401
E ++
Sbjct: 429 QNKLEASL 436
Score = 148 (57.2 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD 72
K I + K+ K+
Sbjct: 62 KTIGE-KMKKKE 72
Score = 138 (53.6 bits), Expect = 2.7e-109, Sum P(3) = 2.7e-109
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 385 QYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM 424
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 443 EFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFM 482
>UNIPROTKB|E2R4D5 [details] [associations]
symbol:SARS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF46589
CTD:6301 GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EMBL:AAEX03004736 RefSeq:XP_866214.1
Ensembl:ENSCAFT00000031572 GeneID:490124 KEGG:cfa:490124
NextBio:20863218 Uniprot:E2R4D5
Length = 513
Score = 952 (340.2 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 186/330 (56%), Positives = 233/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 131 LREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 189
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 190 SRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKV 249
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+CFR+E GSHGR
Sbjct: 250 IGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 309
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +E+FYQ L IPY +V IVSG
Sbjct: 310 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEDFYQSLGIPYHIVNIVSGSLN 369
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 370 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 429
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 430 CATTRTICAILENYQTEKGIVVPEKLKEFM 459
Score = 145 (56.1 bits), Expect = 5.6e-109, Sum P(2) = 5.6e-109
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVRADGEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD 72
K I + K+ K+
Sbjct: 62 KTIGE-KMKKKE 72
>ASPGD|ASPL0000077121 [details] [associations]
symbol:AN8867 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:BN001303 EMBL:AACD01000163 eggNOG:COG0172
HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH OrthoDB:EOG425922 RefSeq:XP_682136.1
ProteinModelPortal:Q5AS63 STRING:Q5AS63
EnsemblFungi:CADANIAT00006181 GeneID:2868363 KEGG:ani:AN8867.2
Uniprot:Q5AS63
Length = 474
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 215/437 (49%), Positives = 289/437 (66%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD+ F ++GG P KI+ESQRRR A VDE+I+L ++ R+ +++V +LN +
Sbjct: 1 MLDLADFITDRGGDPNKIKESQRRRSAPEAAVDEVITLYEEARKARYEVSQINSKLNGLL 60
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
++I + K + +D + ++ + +++ Q + E + K+ +GN VHDSVPVSN
Sbjct: 61 REIGKKKKNKEDATSLLEEKAKLESQRKEAESVALQKEDLRDKKIRTIGNYVHDSVPVSN 120
Query: 121 DEANNAIVRTW---GEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
+E +N+++RTW G +P +H E++ L D ++G + G RG+ L G G+ LN
Sbjct: 121 NEDDNSVIRTWFPEGFVAEKPNCLSHHEVLTRLDGYDPERGVKVVGHRGYCLTGYGLFLN 180
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGD---DKYLIA 234
AL+N+GL+FL K+ Y P FM +E+MAK AQL QFDEELYKVT D DKYLIA
Sbjct: 181 LALVNYGLEFLWKRGYKPNQPPHFMLREMMAKTAQLEQFDEELYKVTESEDKSTDKYLIA 240
Query: 235 TAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCIT 294
T+EQPL A H +W+ +LPIRYAGYS+C+RKEAG+HG+D GIFRVHQFEK+EQF +T
Sbjct: 241 TSEQPLSALHDSEWLQDKDLPIRYAGYSTCYRKEAGAHGKDAWGIFRVHQFEKIEQFVLT 300
Query: 295 SPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYR 354
P DSW +EMI SEEFY+ L +PYQVV+IVSG WFP Q Y+
Sbjct: 301 KPE--DSWKAFDEMISTSEEFYKSLGLPYQVVSIVSGALNNAAAKKYDLEAWFPFQQEYK 358
Query: 355 ELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGV 414
ELVSCSNCTDYQ+R L IRYG KK+ + K YVH LN+TL ATERT+CC+LENYQ EDG
Sbjct: 359 ELVSCSNCTDYQARALGIRYGPKKTTDAKKSYVHALNATLCATERTLCCVLENYQTEDGF 418
Query: 415 EVPEVLQPFM-GGKTFL 430
VPE L+ ++ G FL
Sbjct: 419 IVPEPLRKYIPGAPEFL 435
>UNIPROTKB|P49591 [details] [associations]
symbol:SARS "Serine--tRNA ligase, cytoplasmic" species:9606
"Homo sapiens" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0008033 "tRNA processing" evidence=TAS] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0004828 "serine-tRNA ligase activity" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 EMBL:CH471122 GO:GO:0003723 GO:GO:0008033
GO:GO:0006418 DrugBank:DB00133 eggNOG:COG0172 EMBL:AL356389
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 CTD:6301
HOVERGEN:HBG023172 KO:K01875 OrthoDB:EOG4320Z0 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EMBL:X91257 EMBL:D49914 EMBL:AK312771
EMBL:BC000716 EMBL:BC009390 IPI:IPI00220637 PIR:G01026
RefSeq:NP_006504.2 UniGene:Hs.531176 PDB:3VBB PDBsum:3VBB
ProteinModelPortal:P49591 SMR:P49591 IntAct:P49591 STRING:P49591
PhosphoSite:P49591 DMDM:19860217 PaxDb:P49591 PRIDE:P49591
DNASU:6301 Ensembl:ENST00000234677 GeneID:6301 KEGG:hsa:6301
UCSC:uc001dwu.2 GeneCards:GC01P109756 HGNC:HGNC:10537 HPA:HPA016939
MIM:607529 neXtProt:NX_P49591 PharmGKB:PA34945 PhylomeDB:P49591
ChiTaRS:SARS GenomeRNAi:6301 NextBio:24463 PMAP-CutDB:P49591
ArrayExpress:P49591 Bgee:P49591 CleanEx:HS_SARS
Genevestigator:P49591 GermOnline:ENSG00000031698 Uniprot:P49591
Length = 514
Score = 946 (338.1 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 185/330 (56%), Positives = 231/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE +N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + Y ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 431 CATTRTICAILENYQTEKGITVPEKLKEFM 460
Score = 148 (57.2 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD 72
K I + K+ K+
Sbjct: 62 KTIGE-KMKKKE 72
>UNIPROTKB|F1S5Z3 [details] [associations]
symbol:SARS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF46589
CTD:6301 GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EMBL:CU207229 RefSeq:XP_001925705.3
UniGene:Ssc.9404 Ensembl:ENSSSCT00000007486 GeneID:100155484
KEGG:ssc:100155484 Uniprot:F1S5Z3
Length = 514
Score = 944 (337.4 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 187/330 (56%), Positives = 232/330 (70%)
Query: 105 LEVVGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAG 163
L +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++ + +KGA +AG
Sbjct: 132 LREIGNLLHPSVPISNDEDADNKVERIWGDCSVRKKY-SHVDLVVMVDGFEGEKGAVVAG 190
Query: 164 GRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV 223
RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQL+QFDEELYKV
Sbjct: 191 SRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQLSQFDEELYKV 250
Query: 224 TGEG----DD-----KYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGR 274
G+G DD KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+CFR+E GSHGR
Sbjct: 251 IGKGSEKSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGR 310
Query: 275 DTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXX 334
DT GIFRVHQFEK+EQF +SP+ N SW M EMI+ +EEFYQ L IPY +V IVSG
Sbjct: 311 DTRGIFRVHQFEKIEQFVYSSPHDNKSWKMLREMIETAEEFYQSLGIPYHIVNIVSGSLN 370
Query: 335 XXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTL 394
WFP S +RELVSCSNCTDYQ+RRL IRYGQ K ++VH+LN+T+
Sbjct: 371 HAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDKVEFVHMLNATM 430
Query: 395 TATERTICCILENYQKEDGVEVPEVLQPFM 424
AT RTIC ILENYQ E G+ VPE L+ FM
Sbjct: 431 CATTRTICAILENYQTEKGIVVPEKLKEFM 460
Score = 148 (57.2 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRESQ +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD 72
+ I + K+ K+
Sbjct: 62 RTIGE-KMKKKE 72
>FB|FBgn0031497 [details] [associations]
symbol:CG17259 species:7227 "Drosophila melanogaster"
[GO:0004828 "serine-tRNA ligase activity" evidence=ISS] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:AE014134 SUPFAM:SSF46589
GeneTree:ENSGT00660000095591 KO:K01875 OMA:KSIGEKM GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:P34945 FlyBase:FBgn0031497 EMBL:BT016042
RefSeq:NP_608743.2 UniGene:Dm.1209 SMR:Q9VQL1 IntAct:Q9VQL1
MINT:MINT-967129 STRING:Q9VQL1 EnsemblMetazoa:FBtr0077667
GeneID:33518 KEGG:dme:Dmel_CG17259 UCSC:CG17259-RA
InParanoid:Q9VQL1 GenomeRNAi:33518 NextBio:784000 Uniprot:Q9VQL1
Length = 501
Score = 919 (328.6 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 189/383 (49%), Positives = 248/383 (64%)
Query: 54 KELNKINKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVH 113
K+L +I + Q L+ ++ ++ ++ K +E+ E L VGN +H
Sbjct: 87 KDLTEIVAETLQ-PLTVNQIKQLRVLIDDAMTEN-QKSLELAEQTR--NTSLREVGNHLH 142
Query: 114 DSVPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDG 173
+SVPVSNDE N + RT+G+ K +HV+L+ ++ + +KGA ++GGRG++L G
Sbjct: 143 ESVPVSNDEDENRVERTFGDCEKRGKY-SHVDLIVMIDGMNAEKGAVVSGGRGYFLTGAA 201
Query: 174 VRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEG------ 227
V L QALI L L + Y L+TPFFMRKEVM + AQL+QFDEELYKV G+G
Sbjct: 202 VFLEQALIQHALHLLYARDYVPLYTPFFMRKEVMQEVAQLSQFDEELYKVVGKGSEKAEE 261
Query: 228 ---DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQ 284
D+KYLIAT+EQP+ AYH D+W+ S LPI+YAG S+CFR+E GSHGRDT GIFRVHQ
Sbjct: 262 VGIDEKYLIATSEQPIAAYHRDEWLPESSLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQ 321
Query: 285 FEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXX 344
FEKVEQF +TSP+ N SW+M +EMI N+E+F Q L IPY+VV IVSG
Sbjct: 322 FEKVEQFVLTSPHDNKSWEMMDEMIGNAEQFCQSLGIPYRVVNIVSGALNHAASKKLDLE 381
Query: 345 XWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCI 404
WF S YRELVSCSNC DYQ+RRL +R+GQ K YVH+LN+T+ A R IC I
Sbjct: 382 AWFGGSGAYRELVSCSNCLDYQARRLLVRFGQTKKMNAAVDYVHMLNATMCAATRVICAI 441
Query: 405 LENYQKEDGVEVPEVLQPFMGGK 427
LE +Q E G++VPE L+ +M K
Sbjct: 442 LETHQTETGIKVPEPLKKYMPAK 464
Score = 150 (57.9 bits), Expect = 5.1e-106, Sum P(2) = 5.1e-106
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P+ +RE+Q++RF V LV+ +I+ D +WRQ + +N K N +
Sbjct: 2 VLDLDLFRSDKGGNPDLVRENQKKRFKDVALVETVIAKDTEWRQCRHRADNLNKVKNVCS 61
Query: 61 KQIAQLKLSGKD 72
K I + K+ K+
Sbjct: 62 KVIGE-KMKKKE 72
>GENEDB_PFALCIPARUM|PF07_0073 [details] [associations]
symbol:PF07_0073 "seryl-tRNA synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 EMBL:AL844506 GO:GO:0020011
HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
ProtClustDB:CLSZ2496096 RefSeq:XP_001349080.1 HSSP:P34945
ProteinModelPortal:Q8IBS3 IntAct:Q8IBS3 MINT:MINT-1573722
PRIDE:Q8IBS3 EnsemblProtists:PF07_0073:mRNA GeneID:2655117
KEGG:pfa:PF07_0073 EuPathDB:PlasmoDB:PF3D7_0717700 Uniprot:Q8IBS3
Length = 539
Score = 468 (169.8 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 91/159 (57%), Positives = 109/159 (68%)
Query: 228 DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
DD +LIAT+EQPLCA H D+ I LP++YAG+SSCFRKEAG+HG+D GI RVHQF+K
Sbjct: 309 DDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKEAGAHGKDIRGILRVHQFDK 368
Query: 288 VEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWF 347
VEQFCI P ++ +HEEMI+ EEFYQ L IPY++V+IVSG +F
Sbjct: 369 VEQFCIALPQHSNK--IHEEMIQTCEEFYQSLNIPYRIVSIVSGALNNAASIKYDLEGFF 426
Query: 348 PASQTYRELVSCSNCTDYQSRRLEIRYGQK--KSNEQTK 384
P S YRELVSCSNCTDYQS L IRY K N+ K
Sbjct: 427 PTSNQYRELVSCSNCTDYQSINLNIRYSDSSIKINDLNK 465
Score = 268 (99.4 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 55/140 (39%), Positives = 88/140 (62%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LDINLFR+EKGG P+KI+ES+R+R+ + VD++I D KWR+ F++E +K +N IN
Sbjct: 2 VLDINLFRKEKGGNPDKIKESERKRYHDENNVDKVIEYDDKWRKCIFELEELKKNINMIN 61
Query: 61 KQIAQLKLSGK--DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
K+I K K D ++ K+ IK++ +++ +E + +GNL++ V
Sbjct: 62 KEIGNKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNLLNIKVVC 121
Query: 119 SNDEANNAIVRTWGEKRTEP 138
S++E NN IV+TWGE + P
Sbjct: 122 SDNEDNNKIVKTWGECKILP 141
Score = 249 (92.7 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 63/207 (30%), Positives = 112/207 (54%)
Query: 28 SVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDF----SEMVTKTNE- 82
+++++++ I +KK DVE+ +K+ I ++I + +L K+ ++ ++K
Sbjct: 56 NINMINKEIG-NKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNL 114
Query: 83 --IKQQSADKEV--EVREAWAAVKA--KLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT 136
IK +D E ++ + W K E N +HD+V SN+ + K+
Sbjct: 115 LNIKVVCSDNEDNNKIVKTWGECKILPACEENDNSIHDNVVNSNNIKRETLNNEVDNKK- 173
Query: 137 EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLL 196
+ K H +L+ +G A+ KKG +AG RG+YL G G L+ A++ + L+FL K Y +
Sbjct: 174 KIKYYYHYDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYALNFLVNKKYIPV 233
Query: 197 HTPFFMRKEVMAKCAQLAQFDEELYKV 223
+ PFFM+K +M +CA+L F+E LYK+
Sbjct: 234 YPPFFMKKNIMEECAELDDFEETLYKI 260
Score = 151 (58.2 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 380 NEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMGGKTFL 430
N + K +VHLLN T+ A +R +CC+LENYQ +G+ VPE L+P+M F+
Sbjct: 485 NTENKYHVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRPYMNNMDFI 535
>UNIPROTKB|Q8IBS3 [details] [associations]
symbol:PF07_0073 "Seryl-tRNA synthetase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 EMBL:AL844506 GO:GO:0020011
HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875 OMA:KSIGEKM
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
ProtClustDB:CLSZ2496096 RefSeq:XP_001349080.1 HSSP:P34945
ProteinModelPortal:Q8IBS3 IntAct:Q8IBS3 MINT:MINT-1573722
PRIDE:Q8IBS3 EnsemblProtists:PF07_0073:mRNA GeneID:2655117
KEGG:pfa:PF07_0073 EuPathDB:PlasmoDB:PF3D7_0717700 Uniprot:Q8IBS3
Length = 539
Score = 468 (169.8 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 91/159 (57%), Positives = 109/159 (68%)
Query: 228 DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK 287
DD +LIAT+EQPLCA H D+ I LP++YAG+SSCFRKEAG+HG+D GI RVHQF+K
Sbjct: 309 DDLFLIATSEQPLCALHKDETIESKRLPLKYAGFSSCFRKEAGAHGKDIRGILRVHQFDK 368
Query: 288 VEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWF 347
VEQFCI P ++ +HEEMI+ EEFYQ L IPY++V+IVSG +F
Sbjct: 369 VEQFCIALPQHSNK--IHEEMIQTCEEFYQSLNIPYRIVSIVSGALNNAASIKYDLEGFF 426
Query: 348 PASQTYRELVSCSNCTDYQSRRLEIRYGQK--KSNEQTK 384
P S YRELVSCSNCTDYQS L IRY K N+ K
Sbjct: 427 PTSNQYRELVSCSNCTDYQSINLNIRYSDSSIKINDLNK 465
Score = 268 (99.4 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 55/140 (39%), Positives = 88/140 (62%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LDINLFR+EKGG P+KI+ES+R+R+ + VD++I D KWR+ F++E +K +N IN
Sbjct: 2 VLDINLFRKEKGGNPDKIKESERKRYHDENNVDKVIEYDDKWRKCIFELEELKKNINMIN 61
Query: 61 KQIAQLKLSGK--DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
K+I K K D ++ K+ IK++ +++ +E + +GNL++ V
Sbjct: 62 KEIGNKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNLLNIKVVC 121
Query: 119 SNDEANNAIVRTWGEKRTEP 138
S++E NN IV+TWGE + P
Sbjct: 122 SDNEDNNKIVKTWGECKILP 141
Score = 249 (92.7 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 63/207 (30%), Positives = 112/207 (54%)
Query: 28 SVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDF----SEMVTKTNE- 82
+++++++ I +KK DVE+ +K+ I ++I + +L K+ ++ ++K
Sbjct: 56 NINMINKEIG-NKKKVDKNADVEDLKKKSLNIKEEIPKYQLKEKELLKERNKYISKIGNL 114
Query: 83 --IKQQSADKEV--EVREAWAAVKA--KLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT 136
IK +D E ++ + W K E N +HD+V SN+ + K+
Sbjct: 115 LNIKVVCSDNEDNNKIVKTWGECKILPACEENDNSIHDNVVNSNNIKRETLNNEVDNKK- 173
Query: 137 EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLL 196
+ K H +L+ +G A+ KKG +AG RG+YL G G L+ A++ + L+FL K Y +
Sbjct: 174 KIKYYYHYDLLRKIGGANFKKGIQVAGHRGYYLTGAGFLLHNAILQYALNFLVNKKYIPV 233
Query: 197 HTPFFMRKEVMAKCAQLAQFDEELYKV 223
+ PFFM+K +M +CA+L F+E LYK+
Sbjct: 234 YPPFFMKKNIMEECAELDDFEETLYKI 260
Score = 151 (58.2 bits), Expect = 2.0e-85, Sum P(3) = 2.0e-85
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 380 NEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFMGGKTFL 430
N + K +VHLLN T+ A +R +CC+LENYQ +G+ VPE L+P+M F+
Sbjct: 485 NTENKYHVHLLNGTMVAAQRFLCCLLENYQNGEGIVVPEKLRPYMNNMDFI 535
>TIGR_CMR|BA_0012 [details] [associations]
symbol:BA_0012 "seryl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 ProtClustDB:PRK05431 RefSeq:NP_842583.1
RefSeq:YP_016617.1 RefSeq:YP_026303.1 ProteinModelPortal:Q81W25
SMR:Q81W25 IntAct:Q81W25 PRIDE:Q81W25 DNASU:1083752
EnsemblBacteria:EBBACT00000008435 EnsemblBacteria:EBBACT00000015885
EnsemblBacteria:EBBACT00000019780 GeneID:1083752 GeneID:2816402
GeneID:2851276 KEGG:ban:BA_0012 KEGG:bar:GBAA_0012 KEGG:bat:BAS0015
OMA:NTVRESI BioCyc:BANT260799:GJAJ-17-MONOMER
BioCyc:BANT261594:GJ7F-17-MONOMER Uniprot:Q81W25
Length = 424
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 157/437 (35%), Positives = 246/437 (56%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVD--EIISLDKKWRQLQFDVENYRKELNK 58
MLDI R + K+ Q R DL D LD + R+L E + + N+
Sbjct: 1 MLDIKFLRTNFEEVKAKL---QHR---GEDLTDFGRFEELDTRRRELLVQTEELKSKRNE 54
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
+++QI+ LK KD ++ + E+ ++ D + E+R ++ + + N+ H+S PV
Sbjct: 55 VSQQISVLKREKKDAEALILEMREVGEKVKDLDNELRTVEEDLERLMLSIPNIPHESAPV 114
Query: 119 SNDEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVR 175
E +N + RTWGE + EPK H +L LGI D ++ + G R + KG G R
Sbjct: 115 GETEDDNVVARTWGEVKEFAFEPK--PHWDLATDLGILDFERAGKVTGSRFVFYKGAGAR 172
Query: 176 LNQALINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIA 234
L +ALI+F LD ++ Y + P+ + + M QL +F+E+ +++ E +D +LI
Sbjct: 173 LERALISFMLDLHTDEHGYEEVLPPYMVNRASMTGTGQLPKFEEDAFRI--ESEDYFLIP 230
Query: 235 TAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCIT 294
TAE P+ H D+ ++ +LPIRYA +SSCFR EAGS GRDT G+ R HQF KVE
Sbjct: 231 TAEVPVTNMHRDEILNKEQLPIRYAAFSSCFRSEAGSAGRDTRGLIRQHQFNKVELVKFV 290
Query: 295 SPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYR 354
P DS++ E++ ++E Q+L++PY+V+++ +G W P+ TYR
Sbjct: 291 KPE--DSYEELEKLTNDAERVLQLLELPYRVMSMCTGDLGFTAAKKYDIEVWIPSYGTYR 348
Query: 355 ELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG- 413
E+ SCSN +Q+RR IR+ ++ + + ++VH LN + A RT+ ILENYQ+EDG
Sbjct: 349 EISSCSNFEAFQARRANIRFRREPNGKP--EHVHTLNGSGLAIGRTVAAILENYQQEDGT 406
Query: 414 VEVPEVLQPFMGGKTFL 430
+ +PEVL+P+MGGKT +
Sbjct: 407 IIIPEVLRPYMGGKTVI 423
>TIGR_CMR|CHY_2697 [details] [associations]
symbol:CHY_2697 "seryl-tRNA synthetase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3 OMA:EESWEWH
ProtClustDB:PRK05431 RefSeq:YP_361479.1 ProteinModelPortal:Q3A8Q5
SMR:Q3A8Q5 STRING:Q3A8Q5 PRIDE:Q3A8Q5 GeneID:3726256
KEGG:chy:CHY_2697 PATRIC:21278417
BioCyc:CHYD246194:GJCN-2695-MONOMER Uniprot:Q3A8Q5
Length = 424
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 156/428 (36%), Positives = 243/428 (56%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDI R+ PE + E+ ++R A+++L DE + LD++ R+L DVE + + N ++
Sbjct: 1 MLDIKKVRQN----PEIVVEALKKRGANLNL-DEFLRLDEERRKLLVDVEQKKYKRNTVS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
++I +LK G +++ + + + + EV + + A L + N+ H+SVPV
Sbjct: 56 EEIGRLKKQGLPADDLILEMRALSDEIKKLDDEVAQIEEKLHAILLTIPNIPHESVPVGK 115
Query: 121 DEANNAIVRTWGEKRTEPKL-KNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
D + N VR WGE R K H E+ E L I D +G+ + G R + KG G L +A
Sbjct: 116 DSSENVEVRRWGEPRKFTFTPKAHWEIGEELDILDFARGSKVTGARFTFYKGLGAMLERA 175
Query: 180 LINFGLDFLEKK-SYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQ 238
+INF LD ++ Y + PF + + M QL +F E+++K+ EG + YLI TAE
Sbjct: 176 VINFMLDLHTREHGYVEVFPPFIVNADSMMGTGQLPKFAEDMFKL--EGLNYYLIPTAEV 233
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
P+ + ++ + +LPI + YS+CFR EAG+ GRDT G+ R HQF KVE P
Sbjct: 234 PVTNLYREEILDGDKLPIYHCAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFVKPE- 292
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVS 358
+S++ E++ +++E Q+L +PY+VV + +G W P+ Y+E+ S
Sbjct: 293 -NSYEELEKLTRDAERVLQLLGLPYRVVVLCTGDLGFSAAKTYDIEVWLPSYNDYKEISS 351
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
CSN D+Q+RR +IRY K+ + ++VH LN + A RT+ ILENYQ EDG V VP
Sbjct: 352 CSNFEDFQARRAKIRY--KEHPKAKPEFVHTLNGSGLAVGRTVAAILENYQNEDGSVTVP 409
Query: 418 EVLQPFMG 425
EVL+P+MG
Sbjct: 410 EVLRPYMG 417
>TIGR_CMR|GSU_0037 [details] [associations]
symbol:GSU_0037 "seryl-tRNA synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:NP_951099.1 ProteinModelPortal:Q74H55 SMR:Q74H55
GeneID:2685629 KEGG:gsu:GSU0037 PATRIC:22022811
BioCyc:GSUL243231:GH27-72-MONOMER Uniprot:Q74H55
Length = 422
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 156/432 (36%), Positives = 239/432 (55%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD RE E++ R + V L LD++ R L + E+ + N ++
Sbjct: 1 MLDAKYLRENL----EEVEARLATRGSEVSL-GRFRELDERRRALLTESESLKALKNSVS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
+ I+++K + + + E+ + + E+R ++ L V N+ H +VPV
Sbjct: 56 EAISKVK-DKSQIQDKIAEMREVGVRIKGLDDELRGIEDELQMVLLTVPNVPHPTVPVGA 114
Query: 121 DEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
EA+N VRTWGE +PK H E+ E LGI D ++GA + G R +G G RL
Sbjct: 115 SEADNRQVRTWGEPPCFAFDPK--PHWEIGEGLGILDFERGAKLTGARFTLYRGAGARLE 172
Query: 178 QALINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATA 236
+AL+NF LD E+ +Y + PF + +E M QL +F+++L+ + EG D +LI TA
Sbjct: 173 RALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHL--EGVDYFLIPTA 230
Query: 237 EQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 296
E P+ H + + ++LP+ Y Y+ CFRKEAGS+G+D G+ R HQF KVE P
Sbjct: 231 EVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHP 290
Query: 297 NGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYREL 356
S+D E+++ N+EE + L + Y+VV + +G W P +TYRE+
Sbjct: 291 A--TSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREI 348
Query: 357 VSCSNCTDYQSRRLEIRYGQKKSNEQTK-QYVHLLNSTLTATERTICCILENYQKEDG-V 414
SCSN D+QSRR IR+ + +E++K ++VH LN + A RT+ ILENYQ+EDG V
Sbjct: 349 SSCSNFEDFQSRRASIRF---REDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSV 405
Query: 415 EVPEVLQPFMGG 426
+P+VL+P+MGG
Sbjct: 406 VIPDVLRPYMGG 417
>UNIPROTKB|P67561 [details] [associations]
symbol:serS "Serine--tRNA ligase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP]
UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842584 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:GPIRYAG ProtClustDB:PRK05431 PIR:G70652
RefSeq:NP_218351.1 RefSeq:NP_338495.1 RefSeq:YP_006517331.1
ProteinModelPortal:P67561 SMR:P67561 PRIDE:P67561
EnsemblBacteria:EBMYCT00000002255 EnsemblBacteria:EBMYCT00000069241
GeneID:13317458 GeneID:886163 GeneID:926323 KEGG:mtc:MT3942
KEGG:mtu:Rv3834c KEGG:mtv:RVBD_3834c PATRIC:18130425
TubercuList:Rv3834c Uniprot:P67561
Length = 419
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 150/426 (35%), Positives = 221/426 (51%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+D+ L RE P+ +R SQ R LVD +++ D R + ++ R E +
Sbjct: 1 MIDLKLLREN----PDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAAS 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K + S ++ ++ + E+ +Q E + EA AA A + N++ D VP
Sbjct: 57 KSVGGA--SPEERPPLLRRAKELAEQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGG 114
Query: 121 DEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL 180
++ + A++ GE K+H+EL E LG+ D+++GA ++G R ++L G G L L
Sbjct: 115 ED-DYAVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGL 173
Query: 181 INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
+ L + P +R EVM L EE+Y+V EGD YL+ T+E PL
Sbjct: 174 LQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRV--EGDGLYLVGTSEVPL 231
Query: 241 CAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
YH + + S P+RYAG+SSCFR+EAGSHG+DT GI RVHQF+KVE F +P D
Sbjct: 232 AGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPA--D 289
Query: 301 SWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCS 360
+ HE ++ + +++PY+V+ + +G W P YREL S S
Sbjct: 290 AEHEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTS 349
Query: 361 NCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEV 419
NCT +Q+RRL RY Q LN TL AT R + ILEN+Q+ DG V VP+
Sbjct: 350 NCTTFQARRLATRYRDASGKPQIAA---TLNGTL-ATTRWLVAILENHQRPDGSVRVPDA 405
Query: 420 LQPFMG 425
L PF+G
Sbjct: 406 LVPFVG 411
>UNIPROTKB|Q9KSZ6 [details] [associations]
symbol:serS "Serine--tRNA ligase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR
eggNOG:COG0172 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 ProtClustDB:PRK05431 OMA:SESSHYA PIR:A82242
RefSeq:NP_230755.1 ProteinModelPortal:Q9KSZ6 DNASU:2614380
GeneID:2614380 KEGG:vch:VC1110 PATRIC:20081312 Uniprot:Q9KSZ6
Length = 435
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 159/443 (35%), Positives = 244/443 (55%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD L R E + E + RR F +D V+ I +L+++ + +Q +VEN + N I+
Sbjct: 1 MLDSKLLRTE---LDETAAKLARRGF-KLD-VETIRTLEEQRKSIQVEVENLQSTRNSIS 55
Query: 61 KQIAQLKLSG-KDFSEMVTKTNEIKQQSAD-KEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
KQI QL SG K +E V + D K+VE+ A + A + V N+ D+VP
Sbjct: 56 KQIGQLMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPN 115
Query: 119 SNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
D++ N V WG +T + ++K+HV+L E+ D I G R +KG RL+
Sbjct: 116 GKDDSENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLH 175
Query: 178 QALINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYK---VTGEGDDKY-- 231
+A+ F LD ++ YT L+ P+ + E + QL +F ++L+ +T + D+
Sbjct: 176 RAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPR 235
Query: 232 ---LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKV 288
LI TAE P+ D + +ELP++ ++ CFR EAGS+GRDT G+ R+HQF+KV
Sbjct: 236 RLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKV 295
Query: 289 EQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFP 348
E IT P DS EE+ ++E+ Q+L++PY+ V + +G W P
Sbjct: 296 ELVQITRPE--DSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVP 353
Query: 349 ASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENY 408
A +TYRE+ SCSN D+Q+RR++ R+ +K E+ + VH LN + A RT+ ILENY
Sbjct: 354 AQKTYREISSCSNMWDFQARRMQARFRRK--GEKKPELVHTLNGSGLAVGRTMVAILENY 411
Query: 409 QKEDG-VEVPEVLQPFMGGKTFL 430
Q+ DG + +P VLQ +MGG T +
Sbjct: 412 QEADGRIAIPAVLQKYMGGLTHI 434
>TIGR_CMR|VC_1110 [details] [associations]
symbol:VC_1110 "seryl-tRNA synthetase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
ProtClustDB:PRK05431 OMA:SESSHYA PIR:A82242 RefSeq:NP_230755.1
ProteinModelPortal:Q9KSZ6 DNASU:2614380 GeneID:2614380
KEGG:vch:VC1110 PATRIC:20081312 Uniprot:Q9KSZ6
Length = 435
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 159/443 (35%), Positives = 244/443 (55%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD L R E + E + RR F +D V+ I +L+++ + +Q +VEN + N I+
Sbjct: 1 MLDSKLLRTE---LDETAAKLARRGF-KLD-VETIRTLEEQRKSIQVEVENLQSTRNSIS 55
Query: 61 KQIAQLKLSG-KDFSEMVTKTNEIKQQSAD-KEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
KQI QL SG K +E V + D K+VE+ A + A + V N+ D+VP
Sbjct: 56 KQIGQLMASGDKAGAEAVKQQIGTLGDDLDAKKVELDAVMAQLDAITQTVPNIPDDAVPN 115
Query: 119 SNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
D++ N V WG +T + ++K+HV+L E+ D I G R +KG RL+
Sbjct: 116 GKDDSENVEVSRWGTPKTYDFEVKDHVDLGEMGDGLDFASATKITGARFVVMKGQFARLH 175
Query: 178 QALINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYK---VTGEGDDKY-- 231
+A+ F LD ++ YT L+ P+ + E + QL +F ++L+ +T + D+
Sbjct: 176 RAIAQFMLDLHTDQHGYTELYVPYLVNAETLFGTGQLPKFGQDLFHTEPLTEKASDEEPR 235
Query: 232 ---LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKV 288
LI TAE P+ D + +ELP++ ++ CFR EAGS+GRDT G+ R+HQF+KV
Sbjct: 236 RLSLIPTAEVPVTNLVRDTILDEAELPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKV 295
Query: 289 EQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFP 348
E IT P DS EE+ ++E+ Q+L++PY+ V + +G W P
Sbjct: 296 ELVQITRPE--DSMAALEELTGHAEKVLQLLELPYRKVILCTGDMGFGSCKTYDLEVWVP 353
Query: 349 ASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENY 408
A +TYRE+ SCSN D+Q+RR++ R+ +K E+ + VH LN + A RT+ ILENY
Sbjct: 354 AQKTYREISSCSNMWDFQARRMQARFRRK--GEKKPELVHTLNGSGLAVGRTMVAILENY 411
Query: 409 QKEDG-VEVPEVLQPFMGGKTFL 430
Q+ DG + +P VLQ +MGG T +
Sbjct: 412 QEADGRIAIPAVLQKYMGGLTHI 434
>UNIPROTKB|P0A8L1 [details] [associations]
symbol:serS "seryl-tRNA synthetase" species:83333
"Escherichia coli K-12" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0016260
"selenocysteine biosynthetic process" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA;IDA] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;IDA] UniPathway:UPA00906
HAMAP:MF_00176 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005829 GO:GO:0005524 GO:GO:0000287
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:J03412 eggNOG:COG0172 GO:GO:0097056
EMBL:X05017 GO:GO:0016260 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 OMA:EESWEWH HOGENOM:HOG000035938
ProtClustDB:PRK05431 PIR:A26400 RefSeq:NP_415413.1
RefSeq:YP_489165.1 ProteinModelPortal:P0A8L1 SMR:P0A8L1
DIP:DIP-35989N IntAct:P0A8L1 MINT:MINT-1230011 SWISS-2DPAGE:P0A8L1
PaxDb:P0A8L1 PRIDE:P0A8L1 EnsemblBacteria:EBESCT00000001063
EnsemblBacteria:EBESCT00000015262 GeneID:12932491 GeneID:945506
KEGG:ecj:Y75_p0865 KEGG:eco:b0893 PATRIC:32116997 EchoBASE:EB0940
EcoGene:EG10947 BioCyc:EcoCyc:SERS-MONOMER
BioCyc:ECOL316407:JW0876-MONOMER BioCyc:MetaCyc:SERS-MONOMER
Genevestigator:P0A8L1 Uniprot:P0A8L1
Length = 430
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 153/438 (34%), Positives = 239/438 (54%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD NL R E + EK+ RR F +D VD++ +L+++ + LQ EN + E N +
Sbjct: 1 MLDPNLLRNEPDAVAEKLA---RRGF-KLD-VDKLGALEERRKVLQVKTENLQAERNSRS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K I Q K G+D + + N++ ++ + E+ A ++ + NL D VPV
Sbjct: 56 KSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGK 115
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
DE +N V WG R + ++++HV L E+ D + G R +KG R+++A
Sbjct: 116 DENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRA 175
Query: 180 LINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYK---VTGEGD-DKY-LI 233
L F LD E+ Y+ + P+ + ++ + QL +F +L+ + E D Y LI
Sbjct: 176 LSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALI 235
Query: 234 ATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCI 293
TAE PL + I +LPI+ ++ CFR EAGS+GRDT G+ R+HQF+KVE I
Sbjct: 236 PTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQI 295
Query: 294 TSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTY 353
P DS EEM ++E+ Q+L +PY+ + + +G W PA TY
Sbjct: 296 VRPE--DSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTY 353
Query: 354 RELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG 413
RE+ SCSN D+Q+RR++ R + KS+++T+ VH LN + A RT+ ++ENYQ+ DG
Sbjct: 354 REISSCSNVWDFQARRMQARC-RSKSDKKTR-LVHTLNGSGLAVGRTLVAVMENYQQADG 411
Query: 414 -VEVPEVLQPFMGGKTFL 430
+EVPEVL+P+M G ++
Sbjct: 412 RIEVPEVLRPYMNGLEYI 429
>TIGR_CMR|SO_2310 [details] [associations]
symbol:SO_2310 "seryl-tRNA synthetase" species:211586
"Shewanella oneidensis MR-1" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:NP_717905.1 ProteinModelPortal:Q8EEQ9 SMR:Q8EEQ9
GeneID:1170035 KEGG:son:SO_2310 PATRIC:23524243 Uniprot:Q8EEQ9
Length = 428
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 155/434 (35%), Positives = 219/434 (50%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD R E E++ R F +D V + L++K + LQ E + N I+
Sbjct: 1 MLDPKFLRNELAVTAERLAT---RGFI-LD-VAHLTQLEEKRKSLQVATEELQASRNAIS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K I Q K G+D ++ + ++ Q K+VE+ V A + NL +S P+
Sbjct: 56 KSIGQAKARGEDVDAIMAQVGDLGAQLDAKKVELAAVLEEVNAIAMSMPNLPDESAPIGA 115
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
DE N VR WG R+ + +K+H++L E L D K I G R +KG RLN+A
Sbjct: 116 DETENVEVRRWGSPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRA 175
Query: 180 LINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKV---TGEGDDKYLIAT 235
L F LD + YT + P + + + QL +F E+L+ T EG LI T
Sbjct: 176 LGQFMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPT 235
Query: 236 AEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITS 295
AE PL D + ELPI+ +++CFR EAGS+G+DT G+ R HQF+KVE +
Sbjct: 236 AEVPLTNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVK 295
Query: 296 PNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRE 355
P DS E + ++E Q L +PY+ V + +G W P TYRE
Sbjct: 296 PE--DSMAALEVLTGHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYRE 353
Query: 356 LVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-V 414
+ SCSN D+Q+RR++ RY K N+ +H LN + A RT+ ILENYQ DG V
Sbjct: 354 ISSCSNMKDFQARRMQARYRVKADNKPV--LLHTLNGSGLAVGRTLVAILENYQNADGSV 411
Query: 415 EVPEVLQPFMGGKT 428
VPE L+P+MGG T
Sbjct: 412 TVPEALRPYMGGLT 425
>TAIR|locus:2008865 [details] [associations]
symbol:SRS "Seryl-tRNA synthetase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=IEA;ISS] [GO:0043039 "tRNA
aminoacylation" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=TAS] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=RCA;TAS] [GO:0048481 "ovule
development" evidence=RCA;IMP] [GO:0000096 "sulfur amino acid
metabolic process" evidence=RCA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009069 "serine family amino acid metabolic
process" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0010027 "thylakoid membrane organization" evidence=RCA]
[GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042545
"cell wall modification" evidence=RCA] [GO:0042793 "transcription
from plastid promoter" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0009658 GO:GO:0048481 GO:GO:0007005 InterPro:IPR019955
PROSITE:PS50053 HOGENOM:HOG000035937 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:P34945 OMA:NENANAM EMBL:AY091115
EMBL:AY122978 IPI:IPI00523407 RefSeq:NP_849647.1 UniGene:At.26248
ProteinModelPortal:Q8RWT8 SMR:Q8RWT8 STRING:Q8RWT8 PRIDE:Q8RWT8
ProMEX:Q8RWT8 EnsemblPlants:AT1G11870.2 GeneID:837734
KEGG:ath:AT1G11870 TAIR:At1g11870 InParanoid:Q8RWT8
PhylomeDB:Q8RWT8 ProtClustDB:PLN02320 ArrayExpress:Q8RWT8
Genevestigator:Q8RWT8 Uniprot:Q8RWT8
Length = 514
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 146/438 (33%), Positives = 237/438 (54%)
Query: 2 LDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINK 61
+D R+ K E + + R R ++ +L + ++ L + LQ +VE R+E N + K
Sbjct: 79 IDFKWIRDNK----EAVEINIRNRNSNANL-EAVLQLYENMVNLQKEVERLREERNNVAK 133
Query: 62 QIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSND 121
++ KL + +V + +K+ E ++ + ++ + + N+ H VPV +
Sbjct: 134 KMKG-KLEPSERERLVEEGKNLKESLVTLEEDLVKLKDELQHVAQSIPNMTHPDVPVGGE 192
Query: 122 EANNAIVRTWGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL 180
+++ AI + G R +K+H++L + L + D A+++G + FYLK + V L AL
Sbjct: 193 DSS-AIRQEVGSPREFSFPIKDHLQLGKDLDLIDFDSAAEVSGSKFFYLKNEAVLLEMAL 251
Query: 181 INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDE-ELYKVTGEGDDKYLIATAEQP 239
+N+ L + KK YT L TP +R ++ KC + D ++Y + +G D+ LI TAE P
Sbjct: 252 LNWTLSQVMKKGYTPLTTPEIVRSSIVEKCGFQPRGDNTQVYSI--DGTDQCLIGTAEIP 309
Query: 240 LCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGN 299
+ H+D + S LP++Y +S CFR EAG+ G T G++RVHQF K E F I P +
Sbjct: 310 VGGIHMDSILLESALPLKYIAFSHCFRTEAGAAGAATKGLYRVHQFSKAEMFVICQPEDS 369
Query: 300 DSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSC 359
+S+ H+E+I+ E+ + L + ++ + + + W P + E+ S
Sbjct: 370 ESF--HQELIQIEEDLFTSLGLHFKTLDMATADLGAPAYRKFDIEAWMPGLGRFGEISSA 427
Query: 360 SNCTDYQSRRLEIRY--------GQKK--SNEQTKQYVHLLNSTLTATERTICCILENYQ 409
SNCTDYQSRRL IRY G KK +N ++VH LN+T A R + C+LENYQ
Sbjct: 428 SNCTDYQSRRLGIRYRPSEPPQTGPKKGKANLPATKFVHTLNATACAVPRMMVCLLENYQ 487
Query: 410 KEDG-VEVPEVLQPFMGG 426
+EDG V +PE L+PFMGG
Sbjct: 488 QEDGSVVIPEPLRPFMGG 505
>TIGR_CMR|CPS_2755 [details] [associations]
symbol:CPS_2755 "seryl-tRNA synthetase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
HOGENOM:HOG000035938 RefSeq:YP_269467.1 ProteinModelPortal:Q480Q2
SMR:Q480Q2 STRING:Q480Q2 GeneID:3521069 KEGG:cps:CPS_2755
PATRIC:21468547 OMA:SESSHYA BioCyc:CPSY167879:GI48-2816-MONOMER
Uniprot:Q480Q2
Length = 426
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 145/435 (33%), Positives = 233/435 (53%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD L R + I +++ +R F +D + + +L++ + +Q + + E N +
Sbjct: 1 MLDAKLLRTDLDNIAQQLT---KRNFV-LD-TEALSALEELRKAIQVKTQELQNERNTRS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K I Q K G+D + ++ +++ + E E A + A + NL+ DSVP
Sbjct: 56 KSIGQAKARGEDIAPLLAHVSQLGNDLDAAKTEQDEVLAKIDAIASAIPNLLDDSVPEGK 115
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELL--GIADLKKGADIAGGRGFYLKGDGVRLN 177
DE +N V+ WG R + ++K+HV+L + G+ D + GA +AG R ++G RL+
Sbjct: 116 DEDDNVEVKRWGTPREFDFEVKDHVDLGFSVDKGL-DFESGAKLAGTRFVVMRGKIARLH 174
Query: 178 QALINFGLD-FLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY-LIAT 235
+A+ F LD E+ Y ++ P+ + + QL +F E+L+ T + K+ LI T
Sbjct: 175 RAIAQFMLDTHTEEHGYQEMYVPYLVNAASLYGTGQLPKFGEDLFH-TDLSNKKFSLIPT 233
Query: 236 AEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITS 295
+E PL D+ + +LPI+ ++ CFR EAGS GRD G+ R HQF+KVE I
Sbjct: 234 SEVPLTNLVRDEIVDEDDLPIKMTAHTPCFRSEAGSGGRDIRGLIRQHQFDKVEMVQIVK 293
Query: 296 PNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRE 355
P S +E+ +++E + L++PY+ V + SG W PA TYRE
Sbjct: 294 PE--TSMTALDELTRHAEIILEKLELPYRTVQLCSGDVGFSAAKTFDLEVWLPAQDTYRE 351
Query: 356 LVSCSNCTDYQSRRLEIRYGQKKSNEQTK-QYVHLLNSTLTATERTICCILENYQKEDG- 413
+ SCSN +Q+RR++ R+ ++NE K + +H LN + A RT+ ILENYQ+ DG
Sbjct: 352 ISSCSNMGAFQARRMQARF---RNNETNKPELLHTLNGSGLAVGRTLVAILENYQQADGS 408
Query: 414 VEVPEVLQPFMGGKT 428
+ VP VLQP+MGG T
Sbjct: 409 INVPTVLQPYMGGLT 423
>TIGR_CMR|DET_0577 [details] [associations]
symbol:DET_0577 "seryl-tRNA synthetase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:YP_181319.1 ProteinModelPortal:Q3Z8Y0 SMR:Q3Z8Y0
STRING:Q3Z8Y0 GeneID:3230108 KEGG:det:DET0577 PATRIC:21608223
BioCyc:DETH243164:GJNF-578-MONOMER Uniprot:Q3Z8Y0
Length = 413
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 147/428 (34%), Positives = 226/428 (52%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD+ RE E +R++ R +DEI+ LD R L +++ R + I
Sbjct: 1 MLDLKFIRENT----ELVRKAVAARNTDAP-IDEILELDSCRRTLSQELDTLRAKRKIIA 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
KQ +D + + ++ + ++ E + E + +L V N+ SVPV
Sbjct: 56 KQ--------RD-EAAIEEGRVLRGRISELETGLSEVEEKLTDRLLRVPNIPDASVPVGK 106
Query: 121 DEANNAIVRTWGEKRTEPKL-KNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
DE+ N ++ GEKR K H EL E L I D +G ++G R + LKG+G RL +A
Sbjct: 107 DESENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEGARLQRA 166
Query: 180 LINFGLDFLEKK-SYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQ 238
LI F LD +K YT ++ P+ +++E + L +F + LY E D + + TAE
Sbjct: 167 LIAFMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEE--DYWWVPTAEA 224
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
PL H D+ + +LPI Y Y++CFR+E S G+D GI R+HQF+KVE + P
Sbjct: 225 PLTNLHRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPE- 283
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVS 358
DS+D E+M+ ++EE LKIPY++ +V+ + P + E+ S
Sbjct: 284 -DSFDELEKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSS 342
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
CSNCTD+Q RR +R+ +++ E ++VH LN + A R + ++ENYQ DG + VP
Sbjct: 343 CSNCTDFQGRRANVRF--RRTPEAKPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVVP 400
Query: 418 EVLQPFMG 425
EVL+PFMG
Sbjct: 401 EVLRPFMG 408
>TIGR_CMR|CBU_1188 [details] [associations]
symbol:CBU_1188 "seryl-tRNA synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:AE016828 GenomeReviews:AE016828_GR eggNOG:COG0172 EMBL:X75627
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 OMA:EESWEWH
HOGENOM:HOG000035938 ProtClustDB:PRK05431 PIR:S43135
RefSeq:NP_820183.1 ProteinModelPortal:P39919 SMR:P39919
PRIDE:P39919 GeneID:1209092 KEGG:cbu:CBU_1188 PATRIC:17931121
BioCyc:CBUR227377:GJ7S-1177-MONOMER Uniprot:P39919
Length = 423
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 137/433 (31%), Positives = 235/433 (54%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD + R+ + EK+R RR F +D D + L+ K ++ Q +++++ + N+++
Sbjct: 1 MLDPKILRQNLEHVVEKLR---RRGF-EMDS-DTFLQLENKRKEAQLAIQSFQTKRNQLS 55
Query: 61 KQIAQLKLSGKD----FSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSV 116
K I K G++ +E+ +E+KQ+ A+ E +++A++ + + NL HDSV
Sbjct: 56 KTIGMAKSKGENPELLMAEVSQLNDELKQEEANFET-IQKAFSDFQL---AIPNLPHDSV 111
Query: 117 PVSNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVR 175
P E +N +R WG + K+H L E D + A ++G R L+G R
Sbjct: 112 PDGKSENDNREIRQWGAPPGFDFTPKDHTVLGERDNQLDFEAAAKLSGARFVVLRGSLAR 171
Query: 176 LNQALINFGLDF-LEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIA 234
++AL F LD ++ Y ++ P+ + +E + QL +F EE ++V G+ + +L+
Sbjct: 172 AHRALAQFMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAGDRNF-FLVP 230
Query: 235 TAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCIT 294
T E PL D+ I LP ++ + CFR EAGS+G+D G+ R HQF+KVE +
Sbjct: 231 TGEVPLVNLARDEIIEAPALPKKWVAQTPCFRSEAGSYGKDVRGMIRQHQFQKVELVQLV 290
Query: 295 SPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYR 354
P +S+ EE+ + +E+ Q+L +PY+VV + +G W P+ YR
Sbjct: 291 QPE--NSYQALEEITRQAEKVLQLLALPYRVVELCAGDLGFAAAKTYDLEVWLPSQNKYR 348
Query: 355 ELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG- 413
E+ SCSNC D+Q+RR++ R+ K+ + + +H LN + A RT+ ++ENYQ+ DG
Sbjct: 349 EISSCSNCEDFQARRIQARWRNPKTGKP--ELLHTLNGSGLAVGRTLVAVMENYQQADGH 406
Query: 414 VEVPEVLQPFMGG 426
+ VP+ L+ +MGG
Sbjct: 407 IRVPDALKSYMGG 419
>TIGR_CMR|NSE_0569 [details] [associations]
symbol:NSE_0569 "seryl-tRNA synthetase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0172 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HOGENOM:HOG000035938 OMA:GPIRYAG
ProtClustDB:PRK05431 RefSeq:YP_506450.1 ProteinModelPortal:Q2GDJ6
STRING:Q2GDJ6 GeneID:3932062 KEGG:nse:NSE_0569 PATRIC:22681181
BioCyc:NSEN222891:GHFU-586-MONOMER Uniprot:Q2GDJ6
Length = 415
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 149/420 (35%), Positives = 221/420 (52%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE E +RR D + +I+L ++ + + N + N++ + ++ ++ S
Sbjct: 11 PEGFTEMMKRRGVRFDPLP-LITLYEERKSCVTSLNNLQASKNELTRSFQVIQ---ENKS 66
Query: 75 EMVTKTNEIKQQSADKEV-EVREAWAAVKAKLEVV----GNLVHDSVPVSNDEANNAIVR 129
E+ K I DKE+ V++ + +LE++ N++ + VP+ DE +N +V+
Sbjct: 67 ELFEKAKVI-----DKEILRVKKHLQKICEQLELIVLDLPNILAEDVPIGEDERSNVVVK 121
Query: 130 TWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 186
+WG R EPK H EL LGI D A ++G R G G RL + L +F L+
Sbjct: 122 SWGAVRDFGFEPKA--HDELGVALGILDFLNVAKVSGARFSGFIGSGARLFRVLKDFMLE 179
Query: 187 FLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHID 246
+ + P+ ++++ M K QL +F +E +KV G L+ T+E L + D
Sbjct: 180 HNTEHGHREYFLPYLVKEDAMYKAGQLPKFSQESFKVDG---GMRLVPTSEVSLLNFVSD 236
Query: 247 DWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHE 306
++ +ELP+R YS CFR EAGS G+DT GI R HQF KVE +T P +D D E
Sbjct: 237 NFYGETELPLRMTSYSECFRSEAGSSGKDTKGIIRQHQFGKVELLSVTEPEKSD--DELE 294
Query: 307 EMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQ 366
M+ +E Q LK+PY+VV + SG W P+ YRE+ SCSNC D+Q
Sbjct: 295 RMLCIAEGLLQKLKLPYRVVNLCSGDIGFCSKKTYDIEVWIPSQCCYREISSCSNCGDFQ 354
Query: 367 SRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
SRRL I+Y KK K ++H LN++ A RTI ILENYQ DG +EVPEVL+ G
Sbjct: 355 SRRLAIKYKFKKK----KGFLHTLNASSLAIGRTIVAILENYQMHDGSIEVPEVLRSRFG 410
>TIGR_CMR|APH_0427 [details] [associations]
symbol:APH_0427 "seryl-tRNA synthetase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
RefSeq:YP_505030.1 STRING:Q2GKS1 GeneID:3931299 KEGG:aph:APH_0427
PATRIC:20949470 HOGENOM:HOG000035938 OMA:GPIRYAG
ProtClustDB:PRK05431 BioCyc:APHA212042:GHPM-454-MONOMER
Uniprot:Q2GKS1
Length = 428
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 130/395 (32%), Positives = 213/395 (53%)
Query: 34 EIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVE 93
+II LD + R+L ++ R++ N I K++ LK SG D S V + ++ + ++ E
Sbjct: 29 KIIELDLQKRKLLTELYALREQRNAITKEVTVLKQSGADCSSHVETSKKLAHEISELEER 88
Query: 94 VREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP-KLKNHVELVELLGI 152
++ + L + N+ D+VP +N VR++G+KR+ ++K H L E+L +
Sbjct: 89 IKRD-TGLSYLLCSLPNIPDDAVPFGKSADDNVEVRSYGQKRSFSFEIKPHYVLGEMLNL 147
Query: 153 ADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKK-SYTLLHTPFFMRKEVMAKCA 211
D ++ A ++G R L G L + L +F L+ K+ YT + P + M
Sbjct: 148 MDFRRAAFLSGSRFSILSGQLAALERGLASFMLEMHTKEFGYTEVFHPSLVNDLAMFNVG 207
Query: 212 QLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGS 271
QL +F + ++ T D L+ T+E L + +H + LP+R+ YS CFR EAGS
Sbjct: 208 QLPKFTHDSFQTT---DAMRLVPTSEVVLTNLVANTNLHRNSLPLRFTAYSQCFRSEAGS 264
Query: 272 HGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSG 331
G+DT G+ R HQF KVE IT + ++ ++ E M+ +EE + L++PY+VV + +G
Sbjct: 265 AGQDTRGMIRQHQFSKVELVSITDASQSNV-EL-ERMLSVAEEVLKRLELPYRVVLLCTG 322
Query: 332 XXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIR-YGQKKSNEQTKQYVHLL 390
W PA YRE+ SCSNC D+Q+RR+ + + +K N+++ +VH L
Sbjct: 323 DMGFSASISYDIEVWMPAQNKYREISSCSNCKDFQARRMGAKCFYLEKQNKRSS-FVHTL 381
Query: 391 NSTLTATERTICCILENYQKEDG-VEVPEVLQPFM 424
N + A RTI I+ENYQ DG + +P+ L+ FM
Sbjct: 382 NGSALALGRTIAAIMENYQNSDGTITIPDALRKFM 416
>TIGR_CMR|ECH_0584 [details] [associations]
symbol:ECH_0584 "seryl-tRNA synthetase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR
eggNOG:COG0172 GO:GO:0097056 GO:GO:0016260 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HOGENOM:HOG000035938
ProtClustDB:PRK05431 OMA:NTVRESI RefSeq:YP_507395.2
ProteinModelPortal:Q2GGN8 STRING:Q2GGN8 GeneID:3927953
KEGG:ech:ECH_0584 PATRIC:20576628
BioCyc:ECHA205920:GJNR-586-MONOMER Uniprot:Q2GGN8
Length = 426
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 137/427 (32%), Positives = 220/427 (51%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M DI+ ++ PE + + R S + +II LD K R L + + +KE N+I
Sbjct: 4 MHDIDFIKQN----PELFDNAMQVR-NSEKVAKKIIELDVKKRHLLTQLYSLQKERNQIT 58
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
++I +LK + + + + + + D ++E V L ++ N+ + VP+
Sbjct: 59 QEIEKLKKNNLQCNIQIELSKNVTSKINDINNMIKEDSQLVNL-LNMLPNIPDERVPIGK 117
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
DE +N +R G K + + +K H EL E L + D K+ A ++G R LK +L++A
Sbjct: 118 DENSNVELRRHGNKTSFDFPIKTHYELGENLNLMDFKQAAKLSGSRFVILKNQLAQLDRA 177
Query: 180 LINFGLDFLEKK-SYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQ 238
L NF LD K+ Y+ + P + + M QL +F ++ +K T ++ LI T+E
Sbjct: 178 LSNFMLDIHTKEFGYSEISHPILVHESAMYGVGQLPKFADDSFKTT---ENFRLIPTSEV 234
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
L + I+ +LP+R+ S CFR EAGS GRDT G+ R HQF KVE I +
Sbjct: 235 ALTNLVSNMNINGCDLPLRFTACSPCFRSEAGSAGRDTRGMMRQHQFNKVELVSIVTEE- 293
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVS 358
S E M + +EE + L++PY+V+ + +G W P+ YRE+ S
Sbjct: 294 -QSAPELERMTQIAEEILKRLELPYRVMMLCTGDMGFSASITYDIEVWIPSQNQYREISS 352
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
CSNC +Q+RR+ +Y +N + ++VH LN + A RTI ILENYQ DG + +P
Sbjct: 353 CSNCKAFQARRMNTKYTTIINNVKVSKFVHTLNGSALAIGRTIIAILENYQNRDGSITIP 412
Query: 418 EVLQPFM 424
+L+ +M
Sbjct: 413 HILRKYM 419
>TIGR_CMR|CJE_0438 [details] [associations]
symbol:CJE_0438 "seryl-tRNA synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0004828 "serine-tRNA ligase
activity" evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HOGENOM:HOG000035938 ProtClustDB:PRK05431 OMA:NTVRESI
RefSeq:YP_178457.1 ProteinModelPortal:Q5HW78 STRING:Q5HW78
GeneID:3231200 KEGG:cjr:CJE0438 PATRIC:20042576
BioCyc:CJEJ195099:GJC0-443-MONOMER Uniprot:Q5HW78
Length = 411
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 133/426 (31%), Positives = 216/426 (50%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD+ + + +K++ + L + SL K+ + +E ++ NK +
Sbjct: 1 MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKE----KIALEEFQAFQNKFS 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K++A + +D + K +E K + ++ +V ++ + N+ + VPV
Sbjct: 57 KELA----TAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGE 112
Query: 121 DEANNA-IVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
DE N + + + K H EL E L D +G I+ R LK +G L++A
Sbjct: 113 DENENVELKKVLNPPSFDFTPKEHFELGESLNWLDFIRGVKISQSRFCVLKNEGALLSRA 172
Query: 180 LINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQP 239
L+N+ +DF + + ++ PF + M QL +F E++YKV E D YLI+T+E P
Sbjct: 173 LVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDE--DLYLISTSEIP 230
Query: 240 LCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGN 299
+ + + + LPI+ YS+CFRKEAGS GRDT GI R HQFEKVE IT +
Sbjct: 231 VTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKTEQS 290
Query: 300 DSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSC 359
DS + EM++ + + L + ++ + + +G W P YRE+ S
Sbjct: 291 DS--VFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSV 348
Query: 360 SNCTDYQSRRLEIRYGQKKSNEQTK-QYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
SNC D+Q+RR +IRY NEQ K + VH LN + A RT+ I+ENYQ ++G + +P
Sbjct: 349 SNCRDFQARRAKIRY----KNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIP 404
Query: 418 EVLQPF 423
+VL+ +
Sbjct: 405 DVLKKY 410
>TIGR_CMR|SPO_2325 [details] [associations]
symbol:SPO_2325 "seryl-tRNA synthetase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004828 "serine-tRNA ligase activity"
evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation" evidence=ISS]
UniPathway:UPA00906 HAMAP:MF_00176 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR eggNOG:COG0172
GO:GO:0097056 SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 OMA:KERNNIT
HOGENOM:HOG000035938 ProtClustDB:PRK05431 RefSeq:YP_167548.1
ProteinModelPortal:Q5LR07 GeneID:3194584 KEGG:sil:SPO2325
PATRIC:23378013 Uniprot:Q5LR07
Length = 430
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 141/435 (32%), Positives = 212/435 (48%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M DI RE P + RR S + +I++LD+ R E + + NK +
Sbjct: 1 MHDIRAIREN----PAAFDAALSRR-GSAPVSSDILALDEARRGKILAAETAQADQNKAS 55
Query: 61 KQIAQLKLSGKD--FSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
K++ K G + F + E K + A + E +E + L + NL + VP
Sbjct: 56 KEVGAAKARGDEAEFERLRALVAEKKAEIAAMQAEAKELDTQLSELLAGLPNLPAEDVPQ 115
Query: 119 SNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
DEA+N + WG R + K H +L + D + A ++G R L G R++
Sbjct: 116 GADEADNVELHRWGTPREMDFAPKEHFDLASVQDGMDFETAAKLSGARFVLLSGAVARIH 175
Query: 178 QALINFGLD-FLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATA 236
+AL F LD E+ T ++ P + E+M QL +F E+ Y+ T EG +LI T+
Sbjct: 176 RALAQFMLDTHSEQNGLTEVNGPVLVLSEMMYGTGQLPKFGEDSYQ-TREG--WWLIPTS 232
Query: 237 EQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSP 296
E L I LP RY +S CFR EAGS G+DT G+ R HQFEKVE +T P
Sbjct: 233 EVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHP 292
Query: 297 NGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYREL 356
+ +D+ + M++ +E + L IPY+ + + +G W P TYRE+
Sbjct: 293 DHSDA--EQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREI 350
Query: 357 VSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VE 415
S S C D+Q+RR+ R+ K ++ Q+VH LN + A R + +LEN Q DG V
Sbjct: 351 SSVSTCGDFQARRMNARF--KPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVT 408
Query: 416 VPEVLQPFMGGKTFL 430
+P+ L P++GGK L
Sbjct: 409 LPQALAPYLGGKLTL 423
>ZFIN|ZDB-GENE-040426-1616 [details] [associations]
symbol:sars2 "seryl-tRNA synthetase 2,
mitochondrial" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
ZFIN:ZDB-GENE-040426-1616 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 CTD:54938
HOVERGEN:HBG023869 EMBL:BC055610 IPI:IPI00612584 RefSeq:NP_957473.1
UniGene:Dr.84930 ProteinModelPortal:Q7SXG8 SMR:Q7SXG8 STRING:Q7SXG8
GeneID:394154 KEGG:dre:394154 InParanoid:Q7SXG8 NextBio:20815104
Uniprot:Q7SXG8
Length = 510
Score = 473 (171.6 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 113/352 (32%), Positives = 188/352 (53%)
Query: 79 KTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRT-E 137
K N++ Q +KE+E A++ + N H SVP+ DE+ +V GEKR +
Sbjct: 148 KLNQLYLQ--EKELEKEHYCRALR-----LPNRTHPSVPIG-DESQARVVEVVGEKREFD 199
Query: 138 PKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLH 197
K K H+++ E L I ++ + ++G R +YL+G G +L AL NF +D L+K+ + +
Sbjct: 200 FKPKGHLQIGESLDIIRQRRLSHVSGHRSYYLRGAGAQLQFALQNFAMDLLQKRGFIPMV 259
Query: 198 TPFFMRKEVMAKCAQLAQFDE-ELYKVTGE-GDDKYLIATAEQPLCAYHIDDWIHPSELP 255
P ++ V C + ++Y + + D L T + + Y +D ++ +LP
Sbjct: 260 VPDILKSVVFEGCGMQPHAQKSQVYSLNPKRSPDLNLAGTGKVGVAGYFMDHAVNLKDLP 319
Query: 256 IRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITS-PNGNDSWDMHEEMIKNSEE 314
+R S+C+R E + GR+T G++RVH F K+E +++ G +S + ++ + +E
Sbjct: 320 VRTVCSSTCYRAETDT-GRETWGLYRVHHFTKIEMLGVSANETGEESSQLLDQFVTLQKE 378
Query: 315 FYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRY 374
+ LK+ Y+V+ + + W P ++ E+ S SNCTDYQSRRL+IRY
Sbjct: 379 IFSSLKLHYRVLDMPTQELGPPAYRKFDIEAWMPGRGSFGEISSASNCTDYQSRRLDIRY 438
Query: 375 GQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
+ + QY H +N+T A RTI ILE YQ + G V+VPEVLQ ++G
Sbjct: 439 ---EGEDGKLQYAHTVNATACAIPRTIIAILETYQTKKGTVQVPEVLQQYIG 487
Score = 44 (20.5 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 54 KELNKINKQIAQLK----LSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKL 105
K L K+ ++I+ L+ + E+V K ++ S ++ RE A++ KL
Sbjct: 94 KNLQKVQEEISHLEGRKQVVSSTVRELVGKHDKSTLSSLEEYGHAREEGRAIREKL 149
>DICTYBASE|DDB_G0267604 [details] [associations]
symbol:mserS "serine-tRNA ligase, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA;ISS] [GO:0006418 "tRNA aminoacylation
for protein translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;ISS] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 dictyBase:DDB_G0267604 GO:GO:0005739 GO:GO:0005524
GenomeReviews:CM000150_GR EMBL:AAFI02000003 eggNOG:COG0172
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
RefSeq:XP_647158.1 ProteinModelPortal:Q55GM6
EnsemblProtists:DDB0231306 GeneID:8615961 KEGG:ddi:DDB_G0267604
InParanoid:Q55GM6 OMA:QTERNAN ProtClustDB:CLSZ2431509
Uniprot:Q55GM6
Length = 525
Score = 414 (150.8 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 115/383 (30%), Positives = 201/383 (52%)
Query: 17 KIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKI-NKQIAQLKLSGK---- 71
+I+E+ +R + V+L +++I ++R ++ +++ +R + N+I +K +K G+
Sbjct: 66 QIKENIIKRKSPVEL-EKLIKNYDEYRIIKKELDTFRAKRNEIASKMKLMMKGGGESNKN 124
Query: 72 DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTW 131
D E+V + ++K+ E + + + ++ + N H SVP+ E+N I++
Sbjct: 125 DRLELVEQGKQVKEDLIALEEKHDIYFNEITSEALKIPNNTHPSVPIGA-ESNANIIKMV 183
Query: 132 GEK----RTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDF 187
GEK + + +K+H+EL E LG+ ++ + G + +Y +G L AL +
Sbjct: 184 GEKPNYLKPDEPIKDHLELGESLGV--IRSASKTTGHKYYYFTREGAMLEMALSYWAFSK 241
Query: 188 LEKK-SYTLLHTPFFMRKEVMAKCAQLAQFD-EELYKVTGEGDDKYLIATAEQPLCA-YH 244
L K + + TP + + C A+ D ++L+ + D L AT+E PL Y
Sbjct: 242 LTYKYGFQSVITPDLIHPNLAEACGFHARSDADQLFWIKDR--DLCLSATSEIPLAGMYA 299
Query: 245 IDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDM 304
++ + +ELPI+ GYS CFR EAG G GI+RVHQF KVE F I+ P+ +S ++
Sbjct: 300 NEEPLQSAELPIKMVGYSHCFRPEAG-RGLQNKGIYRVHQFSKVEMFIISKPH--ESNEI 356
Query: 305 HEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTD 364
EE++K E + L + ++V+ + S W P+ Q Y E+ S SNCTD
Sbjct: 357 LEELLKIQIELFSELGLHFRVLDMPSEDLGAPAYRKYDIEVWIPSKQEYGEISSASNCTD 416
Query: 365 YQSRRLEIRYGQKKSNEQTKQYV 387
YQS+RL I+Y K + Q +Q+V
Sbjct: 417 YQSKRLNIKYQSTKDDFQIQQFV 439
Score = 102 (41.0 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
Identities = 22/43 (51%), Positives = 27/43 (62%)
Query: 386 YVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMGGK 427
+ H LN T A R I ILEN Q+ DG V +P+VLQPFM +
Sbjct: 474 FTHTLNGTACAIPRLILAILENNQQSDGSVLIPKVLQPFMNNQ 516
>CGD|CAL0002761 [details] [associations]
symbol:orf19.1201 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0001403 "invasive growth in
response to glucose limitation" evidence=IEA] [GO:0007124
"pseudohyphal growth" evidence=IEA] [GO:0070158 "mitochondrial
seryl-tRNA aminoacylation" evidence=IEA] [GO:0004828 "serine-tRNA
ligase activity" evidence=IEA] InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 CGD:CAL0002761 GO:GO:0005524 GO:GO:0005737
eggNOG:COG0172 EMBL:AACQ01000161 EMBL:AACQ01000157 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 RefSeq:XP_712318.1
RefSeq:XP_712462.1 ProteinModelPortal:Q59RK3 STRING:Q59RK3
GeneID:3645924 GeneID:3646086 KEGG:cal:CaO19.1201
KEGG:cal:CaO19.8792 Uniprot:Q59RK3
Length = 496
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 131/428 (30%), Positives = 209/428 (48%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQ-LKLSGKDF 73
P++ S RR +L++ I + R LQ + + ++ K +A+ LK + D
Sbjct: 73 PKEYESSIHRRQLPQELIENINFITSN-RPLQAQLFSQINDMKKERTILAERLKSNVGDL 131
Query: 74 SEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWG- 132
+ + ++K + E +V+ + AK E + NL+ +VP D +V+
Sbjct: 132 QQFKERLKQLKSELKPLEKQVKTIQEKIYAKAESLPNLIDVTVPT--DPLKEEVVQFINC 189
Query: 133 EKRTEPKLKN------HVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLD 186
+ + K+ N H E+ I D + ++G +YL GDG L QALI + L
Sbjct: 190 QSEEDAKVSNSSAVHDHKEIGVNFNILDFSVASRVSGPSWYYLIGDGALLEQALIQYALS 249
Query: 187 FLEKKSYTLLHTPFFMRKEVMAKCAQLA--QFDE-ELYKVTGEGDDKYLIATAEQPLCAY 243
++ Y +L P ++ E++ C Q +E ++Y++ GE K L TAE PL A+
Sbjct: 250 KARRRGYLMLTPPSIVKSEIVGACGFKPNDQNNEKQIYELKGE--HKSLTGTAEIPLAAF 307
Query: 244 HIDDWIHPS--ELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDS 301
H + PS + PI+Y G S +R EAG+ G+DT G++RVH+F KVE F T+ +
Sbjct: 308 H-SSTVFPSGTQFPIKYVGVSRAYRAEAGASGKDTKGLYRVHEFTKVELFHFTTEE-KAA 365
Query: 302 WDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSN 361
++ E++ E L + +++ + S W P ++ EL SCSN
Sbjct: 366 QEL-EDLKDMQVEIVTELGLSAKLLNMPSSDLGAPAMKKYDIEAWMPGRGSWGELTSCSN 424
Query: 362 CTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILE-NYQKEDG-VEVPEV 419
C DYQSRRL IRY + E ++V LN T A R I ++E N+ E + +PEV
Sbjct: 425 CGDYQSRRLGIRYNDDQ--EGRLKHVSTLNGTCMAVPRVIVALIEQNFNAEKNEISIPEV 482
Query: 420 LQPFMGGK 427
LQPFM GK
Sbjct: 483 LQPFMDGK 490
>RGD|1309456 [details] [associations]
symbol:Sars2 "seryl-tRNA synthetase 2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
RGD:1309456 GO:GO:0005524 GO:GO:0005737 EMBL:CH473979
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 CTD:54938
OrthoDB:EOG4KD6KZ GeneTree:ENSGT00660000095623 IPI:IPI00364070
RefSeq:NP_001099710.1 UniGene:Rn.154470 Ensembl:ENSRNOT00000027166
GeneID:292759 KEGG:rno:292759 UCSC:RGD:1309456 NextBio:634704
Uniprot:D3ZM09
Length = 518
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 125/428 (29%), Positives = 205/428 (47%)
Query: 15 PEKIRESQRRRFASVDLVD--EIISLDKKWRQLQFDVENYRKELNKINKQIAQL--KLSG 70
PEK S R + D IIS ++ RQL+ +++ E + + + L K
Sbjct: 67 PEKAARSLELRKGELRPADLPAIISTWQELRQLREQIQSLEAEKEAVAEAVRALLAKQDS 126
Query: 71 ----KD--FSEMVTKTNEIKQQSAD---KEVEVREAWAAVKAKLEVVGNLVHDSVPVSND 121
KD + + T+ EI++Q +E ++ E + +L N H PV D
Sbjct: 127 NQVQKDPQYQGLRTRGREIRKQLTPLYPRETQLEEEFYQQALRLP---NQTHPDTPVG-D 182
Query: 122 EANNAIVRTWGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL 180
E+ ++R G+K + + H+E+ E L I K+ + ++G R +YL+G G L L
Sbjct: 183 ESQARVLRVVGDKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGL 242
Query: 181 INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQ 238
+NF L L + +T + P +R V C + ++Y + +D L TAE
Sbjct: 243 VNFTLSKLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEV 302
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
L Y +D + +LP+R S+C+R E + G++ G++RVH F KVE F +T P
Sbjct: 303 GLAGYFMDHAVASRDLPVRMVCASTCYRAETDT-GKEPWGLYRVHHFAKVEMFGVTGPGL 361
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVS 358
S + EE + E L + ++V+ + + W P Y E+ S
Sbjct: 362 EQSSQLLEEFLSLQVEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRYGEVTS 421
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
SNCTD+QSRRL I + + ++ E Q+ H +N+T A R + +LE+ Q++DG V VP
Sbjct: 422 ASNCTDFQSRRLYIMF-ETETGEL--QFAHTVNATACAVPRVLIALLESNQQKDGSVLVP 478
Query: 418 EVLQPFMG 425
LQP++G
Sbjct: 479 AALQPYLG 486
>UNIPROTKB|G8JKV4 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9913 "Bos taurus" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF46589 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 GeneTree:ENSGT00660000095623 EMBL:DAAA02047041
Ensembl:ENSBTAT00000002334 OMA:NENANAM Uniprot:G8JKV4
Length = 459
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 118/406 (29%), Positives = 199/406 (49%)
Query: 35 IISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKD--------FSEMVTKTNEIKQQ 86
IIS ++ RQL+ + + +E + + + L ++ + + + + EI++Q
Sbjct: 30 IISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQ 89
Query: 87 SA---DKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP-KLKN 142
KE ++ E + +L N H VPV DE+ ++ G+K + +
Sbjct: 90 LTLLYPKEAQLEEQFYLRALRLP---NQTHPDVPVG-DESQARVLHVVGDKPAFSFQPRG 145
Query: 143 HVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFM 202
H+E+ E L I K+ + ++G R +YL+G G L L+NF L+ L + +T + P +
Sbjct: 146 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 205
Query: 203 RKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAG 260
R V C ++Y + +D L TAE L Y +D + +LPIR
Sbjct: 206 RGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 265
Query: 261 YSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLK 320
S+C+R E + G++ G++RVH F KVE F +T P S ++ EE + E L
Sbjct: 266 SSTCYRAETDT-GKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELG 324
Query: 321 IPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSN 380
+ ++V+ + + W P + E+ S SNCTD+QSRRL I + Q ++
Sbjct: 325 LHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF-QTEAG 383
Query: 381 EQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
E Q+ H +N+T A R + +LE+YQ++DG V VP LQP++G
Sbjct: 384 EL--QFAHTVNATGCAVPRLLIALLESYQQKDGSVLVPPALQPYLG 427
>UNIPROTKB|Q9N0F3 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0004828 "serine-tRNA ligase activity" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IDA] [GO:0097056 "selenocysteinyl-tRNA(Sec) biosynthetic
process" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005739 GO:GO:0005524 GO:GO:0005759
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 EMBL:AB029947 EMBL:BT021565
EMBL:BT021900 EMBL:BC140548 IPI:IPI00698619 RefSeq:NP_776882.1
UniGene:Bt.8850 PDB:1WLE PDBsum:1WLE ProteinModelPortal:Q9N0F3
SMR:Q9N0F3 STRING:Q9N0F3 PRIDE:Q9N0F3 GeneID:282060 KEGG:bta:282060
CTD:54938 HOVERGEN:HBG023869 InParanoid:Q9N0F3 OrthoDB:EOG4KD6KZ
BRENDA:6.1.1.11 EvolutionaryTrace:Q9N0F3 NextBio:20805916
ArrayExpress:Q9N0F3 Uniprot:Q9N0F3
Length = 518
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 118/406 (29%), Positives = 199/406 (49%)
Query: 35 IISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKD--------FSEMVTKTNEIKQQ 86
IIS ++ RQL+ + + +E + + + L ++ + + + + EI++Q
Sbjct: 89 IISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQ 148
Query: 87 SA---DKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP-KLKN 142
KE ++ E + +L N H VPV DE+ ++ G+K + +
Sbjct: 149 LTLLYPKEAQLEEQFYLRALRLP---NQTHPDVPVG-DESQARVLHVVGDKPAFSFQPRG 204
Query: 143 HVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFM 202
H+E+ E L I K+ + ++G R +YL+G G L L+NF L+ L + +T + P +
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 203 RKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAG 260
R V C ++Y + +D L TAE L Y +D + +LPIR
Sbjct: 265 RGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLPIRMVC 324
Query: 261 YSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLK 320
S+C+R E + G++ G++RVH F KVE F +T P S ++ EE + E L
Sbjct: 325 SSTCYRAETDT-GKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELG 383
Query: 321 IPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSN 380
+ ++V+ + + W P + E+ S SNCTD+QSRRL I + Q ++
Sbjct: 384 LHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMF-QTEAG 442
Query: 381 EQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
E Q+ H +N+T A R + +LE+YQ++DG V VP LQP++G
Sbjct: 443 EL--QFAHTVNATGCAVPRLLIALLESYQQKDGSVLVPPALQPYLG 486
>MGI|MGI:1919234 [details] [associations]
symbol:Sars2 "seryl-aminoacyl-tRNA synthetase 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0006412 "translation" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0016874 "ligase
activity" evidence=IEA] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 MGI:MGI:1919234 GO:GO:0005739
GO:GO:0005524 GO:GO:0005759 EMBL:CH466593 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 CTD:54938 HOVERGEN:HBG023869 OrthoDB:EOG4KD6KZ
BRENDA:6.1.1.11 EMBL:AB029949 EMBL:AK010491 EMBL:AK087606
EMBL:AK140760 EMBL:BC079664 IPI:IPI00109354 RefSeq:NP_076126.2
UniGene:Mm.333725 ProteinModelPortal:Q9JJL8 SMR:Q9JJL8
STRING:Q9JJL8 PhosphoSite:Q9JJL8 PaxDb:Q9JJL8 PRIDE:Q9JJL8
Ensembl:ENSMUST00000094632 GeneID:71984 KEGG:mmu:71984
GeneTree:ENSGT00660000095623 InParanoid:Q68FL2 OMA:KERNNIT
NextBio:335130 Bgee:Q9JJL8 CleanEx:MM_SARS2 Genevestigator:Q9JJL8
GermOnline:ENSMUSG00000070699 Uniprot:Q9JJL8
Length = 518
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 126/428 (29%), Positives = 206/428 (48%)
Query: 15 PEKIRESQRRRFASVDLVD--EIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKD 72
PEK S R + D IIS ++ RQL+ + + E + + + L L+ +D
Sbjct: 67 PEKAARSLELRKGELRPADLPAIISTWQELRQLREQIRSLEAEKEAVAEAVRAL-LANQD 125
Query: 73 FSEMVTKTNEIKQQSADKEVEVREAWAAV---KAKLEV--------VGNLVHDSVPVSND 121
S+ V K + + A + E+R+ + + +LE + N H PV D
Sbjct: 126 -SDQVQKDPQYQGLRA-RGREIRKQLTPLYPQETQLEEQLYQQALRLPNQTHPDTPVG-D 182
Query: 122 EANNAIVRTWGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL 180
E+ +VR GEK + + H+E+ E L I K+ + ++G R +YL+G G L L
Sbjct: 183 ESQARVVRVVGEKPAFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGL 242
Query: 181 INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQ 238
+NF L L + +T + P +R V C + ++Y + +D L TAE
Sbjct: 243 VNFTLSKLVSRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEV 302
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
L Y +D + +LP+R S+C+R E + G++ G++RVH F KVE F +T P
Sbjct: 303 GLAGYFMDHSVAFRDLPVRMVCASTCYRAETDT-GKEPWGLYRVHHFTKVEMFGVTGPGL 361
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVS 358
S + +E + E L + ++V+ + + W P Y E+ S
Sbjct: 362 EQSSQLLDEFLSLQVEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRYGEVTS 421
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
SNCTD+QSRRL I + + ++ E Q+ H +N+T A R + +LE+ Q++DG V VP
Sbjct: 422 ASNCTDFQSRRLYIMF-ETETGEL--QFAHTVNATACAVPRVLIALLESNQQKDGSVLVP 478
Query: 418 EVLQPFMG 425
LQP++G
Sbjct: 479 AALQPYLG 486
>UNIPROTKB|Q9NP81 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9606 "Homo sapiens" [GO:0097056 "selenocysteinyl-tRNA(Sec)
biosynthetic process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS;TAS] [GO:0005759 "mitochondrial
matrix" evidence=TAS] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005759 HOGENOM:HOG000035937 GO:GO:0097056 EMBL:AC011455
SUPFAM:SSF46589 KO:K01875 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 CTD:54938
HOVERGEN:HBG023869 BRENDA:6.1.1.11 EMBL:AB029948 EMBL:AK000457
EMBL:AK293414 EMBL:BC001020 EMBL:BC042912 IPI:IPI00328361
IPI:IPI00927163 RefSeq:NP_001139373.1 RefSeq:NP_060297.1
UniGene:Hs.709416 ProteinModelPortal:Q9NP81 SMR:Q9NP81
IntAct:Q9NP81 STRING:Q9NP81 PhosphoSite:Q9NP81 DMDM:23822219
PRIDE:Q9NP81 GeneID:54938 KEGG:hsa:54938 UCSC:uc002ojz.2
GeneCards:GC19M039405 HGNC:HGNC:17697 MIM:612804 MIM:613845
neXtProt:NX_Q9NP81 PharmGKB:PA134899753 InParanoid:Q9NP81
ChiTaRS:SARS2 GenomeRNAi:54938 NextBio:58062 ArrayExpress:Q9NP81
Bgee:Q9NP81 CleanEx:HS_SARS2 Genevestigator:Q9NP81
GermOnline:ENSG00000104835 Uniprot:Q9NP81
Length = 518
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 121/419 (28%), Positives = 203/419 (48%)
Query: 20 ESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVT- 78
E ++ S DL IIS ++ RQLQ + + +E + + + L L+ +D E+
Sbjct: 75 ELRKGELRSADL-PAIISTWQELRQLQEQIRSLEEEKAAVTEAVRAL-LANQDSGEVQQD 132
Query: 79 -KTNEIKQQSADKEVEV-----REAWAAVKAKLEVVG--NLVHDSVPVSNDEANNAIVRT 130
K ++ + + E+ REA + L+ + N H VPV DE+ ++
Sbjct: 133 PKYQGLRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVG-DESQARVLHM 191
Query: 131 WGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLE 189
G+K + + H+E+ E L I K+ + ++G R +YL+G G L L+NF + L
Sbjct: 192 VGDKPVFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLL 251
Query: 190 KKSYTLLHTPFFMRKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQPLCAYHIDD 247
++ +T + P +R V C + ++Y + D L TAE L Y +D
Sbjct: 252 RRGFTPMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDH 311
Query: 248 WIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEE 307
+ +LP+R S+C+R E + G++ G++RVH F KVE F +T P S + EE
Sbjct: 312 TVAFRDLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEE 370
Query: 308 MIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQS 367
+ E L + ++V+ + + W P + E+ S SNCTD+QS
Sbjct: 371 FLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQS 430
Query: 368 RRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
RRL I + Q ++ E Q+ H +N+T A R + +LE+ Q++DG V VP LQ ++G
Sbjct: 431 RRLHIMF-QTEAGEL--QFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLG 486
>UNIPROTKB|E7EX87 [details] [associations]
symbol:SARS2 "Serine--tRNA ligase, mitochondrial"
species:9606 "Homo sapiens" [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR007397 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF00587 Pfam:PF04300 PIRSF:PIRSF001529
PRINTS:PR00981 PROSITE:PS50862 PROSITE:PS51114 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 InterPro:IPR008979 SUPFAM:SSF49785
EMBL:AC011455 SUPFAM:SSF46589 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
HGNC:HGNC:17697 OMA:KERNNIT IPI:IPI00645782
ProteinModelPortal:E7EX87 SMR:E7EX87 PRIDE:E7EX87
Ensembl:ENST00000448145 UCSC:uc010xuq.1 ArrayExpress:E7EX87
Bgee:E7EX87 Uniprot:E7EX87
Length = 518
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 118/414 (28%), Positives = 200/414 (48%)
Query: 25 RFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVT--KTNE 82
R+ S + IS ++ RQLQ + + +E + + + L L+ +D E+ K
Sbjct: 79 RYVSFEQYGRDISTWQELRQLQEQIRSLEEEKAAVTEAVRAL-LANQDSGEVQQDPKYQG 137
Query: 83 IKQQSADKEVEV-----REAWAAVKAKLEVVG--NLVHDSVPVSNDEANNAIVRTWGEKR 135
++ + + E+ REA + L+ + N H VPV DE+ ++ G+K
Sbjct: 138 LRARGREIRKELVHLYPREAQLEEQFYLQALKLPNQTHPDVPVG-DESQARVLHMVGDKP 196
Query: 136 TEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYT 194
+ + H+E+ E L I K+ + ++G R +YL+G G L L+NF + L ++ +T
Sbjct: 197 VFSFQPRGHLEIGEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTFNKLLRRGFT 256
Query: 195 LLHTPFFMRKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQPLCAYHIDDWIHPS 252
+ P +R V C + ++Y + D L TAE L Y +D +
Sbjct: 257 PMTVPDLLRGAVFEGCGMTPNANPSQIYNIDPARFKDLNLAGTAEVGLAGYFMDHTVAFR 316
Query: 253 ELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNS 312
+LP+R S+C+R E + G++ G++RVH F KVE F +T P S + EE +
Sbjct: 317 DLPVRMVCSSTCYRAETNT-GQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQ 375
Query: 313 EEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEI 372
E L + ++V+ + + W P + E+ S SNCTD+QSRRL I
Sbjct: 376 MEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHI 435
Query: 373 RYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
+ Q ++ E Q+ H +N+T A R + +LE+ Q++DG V VP LQ ++G
Sbjct: 436 MF-QTEAGEL--QFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYLG 486
>UNIPROTKB|E2QUT6 [details] [associations]
symbol:FBXO17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
GO:GO:0005524 GO:GO:0005737 SUPFAM:SSF46589 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 GeneTree:ENSGT00660000095623 EMBL:AAEX03000966
Ensembl:ENSCAFT00000009057 OMA:EERFYLR Uniprot:E2QUT6
Length = 524
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 120/413 (29%), Positives = 198/413 (47%)
Query: 35 IISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKD--------FSEMVTKTNEIKQQ 86
IIS ++ RQLQ + + +E + + + L ++ + + + EI++Q
Sbjct: 89 IISTWQELRQLQEQIRSLEEEKGTVAEAVRALLVNQDNSQVQQDPQYQSLRAHGREIRKQ 148
Query: 87 SA---DKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKR-------- 135
KE +++E + KL N H VP + DE+ ++ G+K
Sbjct: 149 LTVLYPKETQLKEQFYLQALKLP---NRTHPDVP-TGDESQARVLHVVGDKPGFSSQYHF 204
Query: 136 TEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTL 195
P +E+ E L I K+ + ++G R +YL+G G L L+NF L+ L + +T
Sbjct: 205 LRPT-SGPLEIAEKLDILRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTP 263
Query: 196 LHTPFFMRKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQPLCAYHIDDWIHPSE 253
+ P +R V C + ++Y + +D L TAE L Y +D + +
Sbjct: 264 MTVPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRD 323
Query: 254 LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSE 313
LPIR S+C+R E + G++ G++RVH F KVE F +T P S + +E +
Sbjct: 324 LPIRMVCSSTCYRAETDT-GKEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLDEFLSLQM 382
Query: 314 EFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIR 373
E L + ++V+ + + W P + E+ S SNCTD+QSRRL I
Sbjct: 383 EILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIM 442
Query: 374 YGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMG 425
+ QK++ E Q+ H +N+T A R + +LE+ Q+EDG V VP VLQP++G
Sbjct: 443 F-QKEAGEL--QFAHTVNATACAVPRLLIALLESNQQEDGSVLVPPVLQPYLG 492
>FB|FBgn0021750 [details] [associations]
symbol:Aats-ser "Seryl-tRNA synthetase" species:7227
"Drosophila melanogaster" [GO:0006434 "seryl-tRNA aminoacylation"
evidence=ISS] [GO:0004828 "serine-tRNA ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 KO:K01875
GO:GO:0004828 GO:GO:0006434 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
GeneTree:ENSGT00660000095623 FlyBase:FBgn0021750 HSSP:P34945
EMBL:AY119252 RefSeq:NP_524365.1 UniGene:Dm.2420 SMR:Q9VF85
IntAct:Q9VF85 MINT:MINT-884159 STRING:Q9VF85
EnsemblMetazoa:FBtr0083086 GeneID:41862 KEGG:dme:Dmel_CG4938
UCSC:CG4938-RA CTD:41862 InParanoid:Q9VF85 OMA:DMPPCEL
GenomeRNAi:41862 NextBio:825976 Uniprot:Q9VF85
Length = 417
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 100/333 (30%), Positives = 169/333 (50%)
Query: 101 VKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGAD 160
++A+LE + N H + +E + + +LK EL L + + +
Sbjct: 78 LQAELEQLPNATHPRLRDYGEEPRELAQYVHRQLTPQSRLKEFSELARALNLYRMDHLGN 137
Query: 161 IAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDE-E 219
G + +YL G L QA+I + L + + + L+ P + KEV+ C + + +
Sbjct: 138 YTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQ 197
Query: 220 LYKV-TGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLG 278
+YK+ TGE L T+E L + + + +LP++ S C+R E S ++ G
Sbjct: 198 VYKLDTGE----CLSGTSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAET-SGLQEEKG 252
Query: 279 IFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSE-EFYQMLKIPYQVVAIVSGXXXXXX 337
I+RVHQF KVE F I + +++ ++ E KN E + ++ L + ++++ +
Sbjct: 253 IYRVHQFNKVEMFAICTEEQSEA-ELEE--FKNIEVDLFRRLGLNFRLLDMPPCELGAPA 309
Query: 338 XXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTAT 397
W P Q + E+ SCSNCTDYQ+RRL IRY ++S + + H +N T TA
Sbjct: 310 YQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRY--RRSADGQILHAHTINGTATAI 367
Query: 398 ERTICCILENYQKEDGVEVPEVLQPFMGGKTFL 430
R + +LE+YQKEDG+E+P VL+PFM + +
Sbjct: 368 PRLLIALLESYQKEDGIEIPAVLRPFMDNQELI 400
>SGD|S000001053 [details] [associations]
symbol:DIA4 "Probable mitochondrial seryl-tRNA synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0070158
"mitochondrial seryl-tRNA aminoacylation" evidence=IGI] [GO:0004828
"serine-tRNA ligase activity" evidence=IEA;IGI;ISA] [GO:0097056
"selenocysteinyl-tRNA(Sec) biosynthetic process" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase
activity" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IGI]
[GO:0007124 "pseudohyphal growth" evidence=IMP] UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 SGD:S000001053 GO:GO:0005739 GO:GO:0005524
GO:GO:0005759 EMBL:BK006934 GO:GO:0001403 EMBL:U10400 GO:GO:0007124
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
KO:K01875 GO:GO:0004828 PANTHER:PTHR11778 TIGRFAMs:TIGR00414
GeneTree:ENSGT00660000095623 OrthoDB:EOG42FWSM EMBL:AY558105
PIR:S46786 RefSeq:NP_011875.1 ProteinModelPortal:P38705 SMR:P38705
DIP:DIP-5573N IntAct:P38705 MINT:MINT-534407 STRING:P38705
PaxDb:P38705 EnsemblFungi:YHR011W GeneID:856402 KEGG:sce:YHR011W
CYGD:YHR011w OMA:SEIVHAC NextBio:981937 Genevestigator:P38705
GermOnline:YHR011W GO:GO:0070158 Uniprot:P38705
Length = 446
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 120/412 (29%), Positives = 192/412 (46%)
Query: 34 EIISLDKKWRQLQFDVENYR--KELNKI-------NKQI-AQLKLSGKDFSEMVTKTNEI 83
E+I D R LQ E Y+ KE++K+ K I AQ+K +E +
Sbjct: 41 ELIEADSIIRSLQLLGERYQNIKEIDKVIADIQIQRKSIEAQIKKDKTKITEYSAALKAL 100
Query: 84 KQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNH 143
K+Q D+ + E + + + N + +VP+ + I K +E + H
Sbjct: 101 KEQYNDQNSKSSELKKKILETCKSLPNTLDPTVPLDAPQIEQWINPLKTHKTSEAQA--H 158
Query: 144 VELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMR 203
V+++ + DL+ +++ G +YL DG RL QAL+ + L + ++ P +
Sbjct: 159 VDIMLKKNMLDLQTASNVTGMSWYYLLNDGARLEQALVAYALKKANENGFSSCVPPSITK 218
Query: 204 KEVMAKCA-QLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDDWI--HPSELPIRYAG 260
KE++ C + E + + L+ATAE PL + + + E + G
Sbjct: 219 KELIDACGFNPRDMNNERQIYALQDTNLGLVATAEIPLAGLGANKVLELNSGECSKKLVG 278
Query: 261 YSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLK 320
S C+R EAG+ G+DT G++RVH+F KVE FC + P S + EE+ + + L
Sbjct: 279 VSRCYRAEAGARGKDTKGLYRVHEFTKVELFCWSKPE--TSAKVLEEIKQFQISVVEELG 336
Query: 321 IPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSN 380
IP +V+ + S W P + E+ S SNCTD+QSRRL +Y + N
Sbjct: 337 IPAKVLNMPSNDLGNPAFKKYDIEAWMPGRGKFGEISSASNCTDFQSRRLNTKY--RDDN 394
Query: 381 EQTKQYVHLLNSTLTATERTICCILEN-YQKEDG-VEVPEVLQPFMGGKTFL 430
+YVH LN T A R I ++EN Y G + VPE L+ FM G+ ++
Sbjct: 395 TGKLEYVHTLNGTAMAIPRVIVALVENFYDPSTGKISVPECLREFMNGQRYI 446
>POMBASE|SPAC25B8.06c [details] [associations]
symbol:SPAC25B8.06c "mitochondrial serine-tRNA ligase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004828
"serine-tRNA ligase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=ISS;IDA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006434 "seryl-tRNA aminoacylation" evidence=ISS] [GO:0032543
"mitochondrial translation" evidence=NAS] UniPathway:UPA00906
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862
PomBase:SPAC25B8.06c GO:GO:0005739 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005759 GO:GO:0032543
eggNOG:COG0172 HOGENOM:HOG000035937 GO:GO:0097056 SUPFAM:SSF46589
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 HSSP:Q9N0F3 PIR:T50193 RefSeq:NP_594466.2
STRING:Q9UTB2 EnsemblFungi:SPAC25B8.06c.1 GeneID:2541567
OrthoDB:EOG42FWSM NextBio:20802661 Uniprot:Q9UTB2
Length = 479
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 116/406 (28%), Positives = 199/406 (49%)
Query: 31 LVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVTKTNEIKQQSADK 90
L+DE SL ++ F + + +KE I QI + + ++V + +K+++ +
Sbjct: 84 LIDEKESLKNEF----FPLLSLKKE---ITLQIERCS-DPNERGKLVNEAKGLKKKTEEY 135
Query: 91 EVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGE---KRTEPKLKNHVELV 147
+ + + V N +VPV ++ +V+ G K+T LK+H+++
Sbjct: 136 NKIISKVTNDLYQYCLAVPNTTLPTVPVGPED-KAVVVQKIGSPLVKKTG-SLKDHLQIA 193
Query: 148 ELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVM 207
GI +L+ A +G Y GD L A+ N+ +DF K + + P +R ++
Sbjct: 194 NE-GI-NLEDAAQASGHSFCYTTGDIALLEMAITNYAMDFAISKGWCPVIPPTIVRTDIA 251
Query: 208 AKCAQLAQFDE--ELYKVTG------EGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYA 259
C + +E ++Y++ + LI TAE L A + + +
Sbjct: 252 LACGFQPRDEEGQQIYELDSYTSPLVSSPKQCLIGTAEISLAALGFKKTFN-NFTERKVV 310
Query: 260 GYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQML 319
G S +R+EAG+ G++ G++R+H+F KVE F T P+ + +M E++ +EF + L
Sbjct: 311 GVSRAYRREAGARGKENRGLYRLHEFTKVELFAWTHPSRSS--EMFNEIVNFQKEFVETL 368
Query: 320 KIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKS 379
KIP +++ + + W PA Q+Y E+ S SNC +YQ+RRL RY
Sbjct: 369 KIPARILNMPTAELGSSASQKYDIEAWMPARQSYGEITSASNCLEYQARRLLTRY----R 424
Query: 380 NEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFM 424
N++ +VH LN T A R I ILEN+Q+EDG V+VPE L P++
Sbjct: 425 NDKDSGFVHTLNGTAAAIPRLIIAILENHQQEDGTVKVPETLVPYI 470
>GENEDB_PFALCIPARUM|PFL0770w [details] [associations]
symbol:PFL0770w "seryl-tRNA synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] UniPathway:UPA00906 InterPro:IPR002314
InterPro:IPR002317 InterPro:IPR006195 Pfam:PF00587 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
GO:GO:0016020 EMBL:AE014188 GO:GO:0020011 eggNOG:COG0172
HOGENOM:HOG000035937 GO:GO:0097056 KO:K01875 GO:GO:0004828
GO:GO:0006434 PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
RefSeq:XP_001350563.1 ProteinModelPortal:Q8I5P7
EnsemblProtists:PFL0770w:mRNA GeneID:811207 KEGG:pfa:PFL0770w
EuPathDB:PlasmoDB:PF3D7_1216000 ProtClustDB:CLSZ2431855
Uniprot:Q8I5P7
Length = 618
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 113/427 (26%), Positives = 203/427 (47%)
Query: 20 ESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVTK 79
+ ++++ + +I+ ++K R + + + +N + LK + E+ +
Sbjct: 189 DEEKKKTEKKNDTQDILKDNQKIRYINKENQATNNNINNQDNSNDVLKKNKIQIEEIKKE 248
Query: 80 TNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPK 139
TN+I + E+ + ++ L + N++ + VP +N I++ + +K +
Sbjct: 249 TNQINKDIDHIEMNIINLKKKIEFNLYKLPNILLNKVPKGKTTEDNKIIKFY-KKENIIQ 307
Query: 140 LKN--------HVELVELLGIADLKKGADIAGGRGF-YLKGDGVRLNQALINFGLD-FLE 189
L N H E+++ + G G+ L D +L +ALI+F ++ +
Sbjct: 308 LNNEEYDFIEPHEEIIKKYENNFIFSNISNKIGFGYNILVNDIAKLERALIDFMINTHVN 367
Query: 190 KKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGE----GDDKYLIATAEQPLCAYHI 245
K YT + P + K + QL +F+E+L+K+T +D YLI T+E L
Sbjct: 368 KFLYTYVKAPEIVTKSALFNTGQLPKFEEDLFKITDNYKLLNEDAYLIPTSEVSLLNLFK 427
Query: 246 DDWIHPSELPIRYAGYSSCFRKEAGS-HGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDM 304
+ I LPI+ +SSCFR E + +G+ + G+ R H F+KVE IT + +
Sbjct: 428 NSQIDYIHLPIKLVSHSSCFRTEKNNTYGKTSKGLLREHIFQKVELINITDKKTSPFY-- 485
Query: 305 HEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTD 364
++++IK S + L IPY++V + S W P+ Q Y E+ SCSNC D
Sbjct: 486 YKKLIKQSTYILKQLNIPYRLVLLNSIETPYSASICYDIEAWLPSQQRYVEVSSCSNCLD 545
Query: 365 YQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQ-----KED--GVEVP 417
+Q+RRL ++Y K SN + H +N + A R + ILE YQ K + ++VP
Sbjct: 546 FQARRLNLKYKIKDSNN----FCHTINGSGLAVGRVLAIILEQYQIKKKHKNEITKIQVP 601
Query: 418 EVLQPFM 424
+VL+ +M
Sbjct: 602 KVLRKYM 608
>UNIPROTKB|Q8I5P7 [details] [associations]
symbol:PFL0770w "Serine--tRNA ligase, cytoplasmic"
species:36329 "Plasmodium falciparum 3D7" [GO:0004828 "serine-tRNA
ligase activity" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=NAS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006434
"seryl-tRNA aminoacylation" evidence=ISS] [GO:0016020 "membrane"
evidence=NAS] [GO:0020011 "apicoplast" evidence=ISS]
UniPathway:UPA00906 InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 Pfam:PF00587 PRINTS:PR00981 PROSITE:PS50862
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0016020
EMBL:AE014188 GO:GO:0020011 eggNOG:COG0172 HOGENOM:HOG000035937
GO:GO:0097056 KO:K01875 GO:GO:0004828 GO:GO:0006434
PANTHER:PTHR11778 TIGRFAMs:TIGR00414 HSSP:Q9N0F3
RefSeq:XP_001350563.1 ProteinModelPortal:Q8I5P7
EnsemblProtists:PFL0770w:mRNA GeneID:811207 KEGG:pfa:PFL0770w
EuPathDB:PlasmoDB:PF3D7_1216000 ProtClustDB:CLSZ2431855
Uniprot:Q8I5P7
Length = 618
Score = 380 (138.8 bits), Expect = 1.2e-34, P = 1.2e-34
Identities = 113/427 (26%), Positives = 203/427 (47%)
Query: 20 ESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVTK 79
+ ++++ + +I+ ++K R + + + +N + LK + E+ +
Sbjct: 189 DEEKKKTEKKNDTQDILKDNQKIRYINKENQATNNNINNQDNSNDVLKKNKIQIEEIKKE 248
Query: 80 TNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPK 139
TN+I + E+ + ++ L + N++ + VP +N I++ + +K +
Sbjct: 249 TNQINKDIDHIEMNIINLKKKIEFNLYKLPNILLNKVPKGKTTEDNKIIKFY-KKENIIQ 307
Query: 140 LKN--------HVELVELLGIADLKKGADIAGGRGF-YLKGDGVRLNQALINFGLD-FLE 189
L N H E+++ + G G+ L D +L +ALI+F ++ +
Sbjct: 308 LNNEEYDFIEPHEEIIKKYENNFIFSNISNKIGFGYNILVNDIAKLERALIDFMINTHVN 367
Query: 190 KKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGE----GDDKYLIATAEQPLCAYHI 245
K YT + P + K + QL +F+E+L+K+T +D YLI T+E L
Sbjct: 368 KFLYTYVKAPEIVTKSALFNTGQLPKFEEDLFKITDNYKLLNEDAYLIPTSEVSLLNLFK 427
Query: 246 DDWIHPSELPIRYAGYSSCFRKEAGS-HGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDM 304
+ I LPI+ +SSCFR E + +G+ + G+ R H F+KVE IT + +
Sbjct: 428 NSQIDYIHLPIKLVSHSSCFRTEKNNTYGKTSKGLLREHIFQKVELINITDKKTSPFY-- 485
Query: 305 HEEMIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTD 364
++++IK S + L IPY++V + S W P+ Q Y E+ SCSNC D
Sbjct: 486 YKKLIKQSTYILKQLNIPYRLVLLNSIETPYSASICYDIEAWLPSQQRYVEVSSCSNCLD 545
Query: 365 YQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQ-----KED--GVEVP 417
+Q+RRL ++Y K SN + H +N + A R + ILE YQ K + ++VP
Sbjct: 546 FQARRLNLKYKIKDSNN----FCHTINGSGLAVGRVLAIILEQYQIKKKHKNEITKIQVP 601
Query: 418 EVLQPFM 424
+VL+ +M
Sbjct: 602 KVLRKYM 608
>ASPGD|ASPL0000036378 [details] [associations]
symbol:sgdB species:162425 "Emericella nidulans"
[GO:0009847 "spore germination" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004828 "serine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IEA] [GO:0007124 "pseudohyphal growth" evidence=IEA]
[GO:0070158 "mitochondrial seryl-tRNA aminoacylation" evidence=IEA]
InterPro:IPR002314 InterPro:IPR002317 InterPro:IPR006195
InterPro:IPR010978 InterPro:IPR015866 Pfam:PF00587 Pfam:PF02403
PIRSF:PIRSF001529 PRINTS:PR00981 PROSITE:PS50862 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 HOGENOM:HOG000035937 SUPFAM:SSF46589
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 PANTHER:PTHR11778
TIGRFAMs:TIGR00414 EnsemblFungi:CADANIAT00009970 OMA:RSHVHIG
Uniprot:C8VIL4
Length = 478
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 102/308 (33%), Positives = 150/308 (48%)
Query: 140 LKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTP 199
L++HV + LG+ D A G ++L GDG L QALI + L + +T + P
Sbjct: 170 LRSHVSIGTDLGLIDFTSAATTTGWGWYFLTGDGALLEQALIQYSLSVARRHGWTPISPP 229
Query: 200 FFMRKEVMAKCA---QLAQFDEELYKVTGEGDDKY-----LIATAEQPLCAYHIDDWIHP 251
+ + C + +++++ + DK L ATAE PL A H + + P
Sbjct: 230 SIVWSYLTEACGFQPRDQNNEQQIWAIEQAEKDKAKPPRSLAATAEIPLAAMHARNELDP 289
Query: 252 SELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF--CITSPNGND--SWDMHEE 307
+ LPI+ G S C+R EAGS G DT G++RVH+F KVE F +SP + S D+ E
Sbjct: 290 AALPIKLVGPSRCYRAEAGSRGVDTKGLYRVHEFTKVEMFGWADSSPTSSSPTSDDLFEG 349
Query: 308 MIKNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPA-------SQTYRELVSCS 360
++ +E L++P +++ + + FP+ + E+ S S
Sbjct: 350 LLTVQKEILTSLQLPCRILEMPTSDLGASATRKRDIEALFPSRMRGNGLEDAWGEVTSAS 409
Query: 361 NCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILEN-YQKEDGVEV-PE 418
CTDYQSRRL R KS + H +N T A R + ILEN + E V V PE
Sbjct: 410 ICTDYQSRRLGTRVRGVKS-----VFPHTVNGTAVAVPRVLAAILENGWDAERKVVVLPE 464
Query: 419 VLQPFMGG 426
VL+PFMGG
Sbjct: 465 VLRPFMGG 472
>WB|WBGene00005662 [details] [associations]
symbol:sars-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006418 "tRNA aminoacylation for protein translation"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 Pfam:PF00587 PIRSF:PIRSF001529 PRINTS:PR00981
PROSITE:PS50862 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040010 KO:K01875 GO:GO:0004828 GO:GO:0006434
PANTHER:PTHR11778 GeneTree:ENSGT00660000095623 EMBL:FO081480
EMBL:AB016796 PIR:T34480 RefSeq:NP_500549.1 UniGene:Cel.19595
ProteinModelPortal:G5EF77 SMR:G5EF77 EnsemblMetazoa:W03B1.4
GeneID:177200 KEGG:cel:CELE_W03B1.4 CTD:177200 WormBase:W03B1.4
OMA:RCFRTEI NextBio:895760 Uniprot:G5EF77
Length = 441
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 108/399 (27%), Positives = 193/399 (48%)
Query: 30 DLVDEIISLDKKWRQLQFDVENYRK---ELNKINKQIAQLKLSGKDFSEMVTKTNEIKQQ 86
DL E + +K ++ ++ N RK +++K++K+ A ++ +M+ K+ E +
Sbjct: 44 DLNFEFLLDEKNLEAIRENILN-RKGVGDIDKVHKKWAVIQ-------KMM-KSGEKQTN 94
Query: 87 SADKEVEVREAWAAVKAKLEVVGNLVHDSVPV-SNDEANNAIVRTWGEKRTEPKLKNHVE 145
A E + ++ W + + ++ N+ D VP S D+A IV WGEKR + L +
Sbjct: 95 GAVSEQKYKQLWDELYDEAILIPNMTQDGVPRGSEDQAK--IVAEWGEKREDECLTAE-K 151
Query: 146 LVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKE 205
LV+ L D +G R + G L +AL+++ + + + + P + E
Sbjct: 152 LVQTW--RSLLHPTDASGQRSYVFLGALASLEKALLDYAHERVCALGFRPITVPDIVSGE 209
Query: 206 VMAKCAQLAQFDEEL-YKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSC 264
V C + + D + Y + GE L TAE + A+ + +LPIR S C
Sbjct: 210 VTQACGVMQRSDHPIQYTLAGEESHTKLSGTAEMGIAAFLRGRTFNQDQLPIRLVSLSRC 269
Query: 265 FRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQ 324
FR E + ++RVH+F KVE F +++P + + ++ + +++ + +Q L + +
Sbjct: 270 FRTEISKSASEAK-LYRVHEFSKVEMFVVSTPEQSAA-EL-DYLVEVQKGTFQALGVHCR 326
Query: 325 VVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTK 384
+ + S W P + Y E+ S SNCTD+QSRRL I+Y K+ + T
Sbjct: 327 QLEMPSEELGASAARKFDIEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY---KTADGTT 383
Query: 385 QYVHLLNSTLTATERTICCILENYQKED-GV-EVPEVLQ 421
+Y H N T A+ R + +LE +Q + G+ E+PE L+
Sbjct: 384 KYAHTCNGTALASTRALISVLETFQNDKKGLGELPEPLR 422
>UNIPROTKB|H9KYV2 [details] [associations]
symbol:SARS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004828 "serine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR002317 PRINTS:PR00981 GO:GO:0005524
GO:GO:0005737 GeneTree:ENSGT00660000095591 GO:GO:0004828
GO:GO:0006434 PANTHER:PTHR11778 EMBL:AADN02069375
Ensembl:ENSGALT00000000740 OMA:KPFMPER Uniprot:H9KYV2
Length = 148
Score = 276 (102.2 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 50/79 (63%), Positives = 61/79 (77%)
Query: 346 WFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCIL 405
WFP S +RELVSCSNCTDYQ+RRL IR+GQ K ++VH+LN+T+ AT RTIC IL
Sbjct: 16 WFPGSGAFRELVSCSNCTDYQARRLRIRFGQTKKMMDKVEFVHMLNATMCATTRTICAIL 75
Query: 406 ENYQKEDGVEVPEVLQPFM 424
ENYQ E+G+ VPE L+ FM
Sbjct: 76 ENYQTEEGIVVPERLRDFM 94
>UNIPROTKB|F1RI32 [details] [associations]
symbol:FBXO17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR002314 InterPro:IPR002317
InterPro:IPR006195 InterPro:IPR010978 InterPro:IPR015866
Pfam:PF00587 PROSITE:PS50862 GO:GO:0005524 GO:GO:0005737
SUPFAM:SSF46589 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 GeneTree:ENSGT00660000095623 EMBL:FP565352
Ensembl:ENSSSCT00000003297 OMA:MVRRLWP Uniprot:F1RI32
Length = 510
Score = 285 (105.4 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 85/309 (27%), Positives = 148/309 (47%)
Query: 30 DLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKD--------FSEMVTKTN 81
D + IIS ++ RQLQ +++ +E + + + L ++ + + + +
Sbjct: 84 DDLPAIISTWQELRQLQEQIQSLEEEKRAVAEAVRALVVTQDNDQVQQDPRYQSLRARGR 143
Query: 82 EIKQQSA---DKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP 138
EI++Q KE ++ E W ++A L + N H VPV DE+ ++ G+K
Sbjct: 144 EIRKQLVLLYPKEAQLEE-WFYLRA-LRLP-NQTHPDVPVG-DESQARVLHVVGDKPAFS 199
Query: 139 -KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLH 197
+ + H++L E L I K+ + ++G R +YL+G G L L+NF L L + +T +
Sbjct: 200 FQPRGHLQLAENLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLQKLIHRGFTPMT 259
Query: 198 TPFFMRKEVMAKCAQLAQFD-EELYKVT-GEGDDKYLIATAEQPLCAYHIDDWIHPSELP 255
P +R V C + ++Y + +D L TAE L Y +D + +LP
Sbjct: 260 VPDLLRGAVFEGCGMTPNANPSQIYNIDPSRFEDLNLAGTAEVGLAGYFMDHSVAFRDLP 319
Query: 256 IRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEF 315
IR S+C+R E + G++ G++RVH F KVE F +T P S + EE + E
Sbjct: 320 IRMVCSSTCYRAETDT-GKEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEI 378
Query: 316 YQMLKIPYQ 324
L + ++
Sbjct: 379 LTELGLHFR 387
>UNIPROTKB|Q58CS4 [details] [associations]
symbol:SARS2 "Seryl-tRNA synthetase 2" species:9913 "Bos
taurus" [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR002317 InterPro:IPR010978
InterPro:IPR015866 GO:GO:0005524 GO:GO:0005737 HOGENOM:HOG000035937
SUPFAM:SSF46589 GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40
PANTHER:PTHR11778 UniGene:Bt.8850 GeneTree:ENSGT00660000095623
EMBL:DAAA02047041 EMBL:BT021873 IPI:IPI00703583 SMR:Q58CS4
STRING:Q58CS4 Ensembl:ENSBTAT00000032066 Uniprot:Q58CS4
Length = 301
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 47/188 (25%), Positives = 88/188 (46%)
Query: 35 IISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKD--------FSEMVTKTNEIKQQ 86
IIS ++ RQL+ + + +E + + + L ++ + + + + EI++Q
Sbjct: 89 IISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLRARGREIRKQ 148
Query: 87 SA---DKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEP-KLKN 142
KE ++ E + +L N H VPV DE+ ++ G+K + +
Sbjct: 149 LTLLYPKEAQLEEQFYLRALRLP---NQTHPDVPVG-DESQARVLHVVGDKPAFSFQPRG 204
Query: 143 HVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFM 202
H+E+ E L I K+ + ++G R +YL+G G L L+NF L+ L + +T + P +
Sbjct: 205 HLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLL 264
Query: 203 RKEVMAKC 210
R V C
Sbjct: 265 RGVVFEGC 272
>FB|FBgn0051133 [details] [associations]
symbol:Slimp "Seryl-tRNA synthetase-like insect mitochondrial
protein" species:7227 "Drosophila melanogaster" [GO:0004828
"serine-tRNA ligase activity" evidence=ISS;IDA] [GO:0070584
"mitochondrion morphogenesis" evidence=IMP] [GO:0006434 "seryl-tRNA
aminoacylation" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0045333 "cellular respiration"
evidence=IMP] InterPro:IPR002317 InterPro:IPR010978
InterPro:IPR015866 Pfam:PF02403 PIRSF:PIRSF001529 EMBL:AE014297
GO:GO:0005739 GO:GO:0000166 GO:GO:0045333 GO:GO:0000049
GO:GO:0070584 eggNOG:COG0172 SUPFAM:SSF46589 KO:K01875
GO:GO:0004828 Gene3D:1.10.287.40 PANTHER:PTHR11778
GeneTree:ENSGT00660000095623 EMBL:AY060374 RefSeq:NP_732958.1
UniGene:Dm.23151 IntAct:Q95T19 MINT:MINT-876515 STRING:Q95T19
EnsemblMetazoa:FBtr0084583 GeneID:318604 KEGG:dme:Dmel_CG31133
UCSC:CG31133-RA CTD:318604 FlyBase:FBgn0051133 InParanoid:Q95T19
OMA:CVLLEAN OrthoDB:EOG4FN30C GenomeRNAi:318604 NextBio:845617
Uniprot:Q95T19
Length = 464
Score = 135 (52.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 80/398 (20%), Positives = 161/398 (40%)
Query: 32 VDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFSEMVTKTNEIKQQSADKE 91
++ ++S +K++ + +E ++ K++ +L SG ++ E+K+
Sbjct: 68 LETVLSKYEKYKTHHAQLSKVAEERERVTKRLKELTKSGSSAVQL----EELKEHGKSLR 123
Query: 92 VEVREAWAAVKAKLEV--------VGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNH 143
E++ A +E + NL+H PV +E ++ G ++E K +H
Sbjct: 124 NELK-ALKQTLYPIEDDFIHDYLHLPNLLHVQCPVGGEEK---LLYRHGIPKSENKTTSH 179
Query: 144 VELVELLGIADLKKGADIAGGRGFYLKGDGVRLN-QALINFGLDFLEKKSYTLLHTPFFM 202
+ EL+ D + +YL + A+ + F+ + P F+
Sbjct: 180 LARQELVHFVDNNR---------YYLMEQAALFDVNAMQSLARYFVNHGHFIQTANPDFV 230
Query: 203 RKEVM-AKCAQLAQF----DEEL-------YKVTGEGDDKYLIATAEQPLCAYHIDDWIH 250
R ++ A L+ + +E L Y G + YL A + LC Y
Sbjct: 231 RCVLLEANATPLSDYHLVQEEHLQNKINTAYLTGGASFESYLGAMTK--LCVY------- 281
Query: 251 PSELPIRYAGYSSCF-RKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMI 309
PS LP+RY + R EA +G ++ Q V+ F T + N++ E ++
Sbjct: 282 PSVLPLRYVCCGRSYNRAEADLYG-PIPSLYTATQTNAVQIFVATQTD-NEADSQLEHIL 339
Query: 310 KNSEEFYQMLKIPYQVVAIVSGXXXXXXXXXXXXXXWFPASQTYRELVSCSNCTDYQSRR 369
+ +FY+ L IP+++ + + P+ Q Y + SN D+ S+R
Sbjct: 340 NLATDFYKALDIPFRISYATAADLTPAESIRAVIEVYAPSLQRYVCVGRISNYGDFVSKR 399
Query: 370 LEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILEN 407
I + ++ E+ ++H++ + T R I ++E+
Sbjct: 400 --ILFSTRR--EKHYDFLHMVGGPVLYTSRLIAALVEH 433
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 447 416 0.00081 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 58
No. of states in DFA: 620 (66 KB)
Total size of DFA: 275 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.95u 0.10s 39.05t Elapsed: 00:00:02
Total cpu time: 38.97u 0.10s 39.07t Elapsed: 00:00:02
Start: Fri May 10 04:08:12 2013 End: Fri May 10 04:08:14 2013