BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043456
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81983|SYS_HELAN Serine--tRNA ligase OS=Helianthus annuus PE=2 SV=1
Length = 438
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/435 (81%), Positives = 393/435 (90%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDINLFREEKGG PE +RESQRRR ASV++VDEII LDK+WRQ QF++E RK+ N+IN
Sbjct: 1 MLDINLFREEKGGNPEIVRESQRRRGASVEIVDEIIKLDKEWRQRQFELEQLRKDFNRIN 60
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K++A+L++SG D S ++ T E K +A K+ EV+EA A+ +KLE VGNLVHDSVPVSN
Sbjct: 61 KEVAKLRISGGDASSLIKNTEENKDSTAKKQAEVQEARTALYSKLETVGNLVHDSVPVSN 120
Query: 121 DEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL 180
DEA+NA+VRTWGE+R E LKNHVELVELLGIADLKKGA++AGGRG+YLKGDGVRLNQAL
Sbjct: 121 DEADNAVVRTWGERREETNLKNHVELVELLGIADLKKGANVAGGRGYYLKGDGVRLNQAL 180
Query: 181 INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
INFGLDFLEK+ YT L TPFFMRK++M KCAQLAQFDEELYKVTGEGDDKYLIATAEQPL
Sbjct: 181 INFGLDFLEKRKYTALQTPFFMRKDIMGKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
Query: 241 CAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
CAYHIDDWIHP+ELP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFC+T P+GND
Sbjct: 241 CAYHIDDWIHPNELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCLTKPSGND 300
Query: 301 SWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCS 360
SW+MHEEMIKNSEEFYQMLK+PYQVV+IVSGALNDAAAKK DLEAWFPAS+TYRELVSCS
Sbjct: 301 SWEMHEEMIKNSEEFYQMLKLPYQVVSIVSGALNDAAAKKYDLEAWFPASKTYRELVSCS 360
Query: 361 NCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVL 420
NCTDYQSR+LEIR GQKK NEQ KQY HLLNSTLTATERT+CCILENYQ E GV +PEVL
Sbjct: 361 NCTDYQSRKLEIRCGQKKGNEQAKQYCHLLNSTLTATERTLCCILENYQTEKGVAIPEVL 420
Query: 421 QPFMGGKTFLPFKAK 435
QPFMGGKTFL F K
Sbjct: 421 QPFMGGKTFLDFLKK 435
>sp|Q39230|SYS_ARATH Serine--tRNA ligase OS=Arabidopsis thaliana GN=At5g27470 PE=2 SV=1
Length = 451
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/451 (79%), Positives = 408/451 (90%), Gaps = 4/451 (0%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDINLFREEKG PE IRESQRRRFASV++VDEII LDK+WRQ QF+V+++RKE NK+N
Sbjct: 1 MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN 60
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
KQ+AQLK+ +D SE++ +T + KQ S KE EVREA+AA+KAKLE VGNLVHDSVPV
Sbjct: 61 KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK 120
Query: 121 DEANNAIVRTWGEKR-TEP--KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
DEANN +++ WGEKR + P KLKNHV+LVELLGIAD K+GA+IAG RGF+LKGDG+ LN
Sbjct: 121 DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN 180
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
QALINFGL FL+K+ +T L PFFMRK+VMAKCAQLAQFDEELYKVTGEGDDKYLIATAE
Sbjct: 181 QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 240
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
QPLCAYHID+WIHP+ELP+RYAGYSSCFRKEAGSHGRDTLGIFRVHQFEK+EQFCIT PN
Sbjct: 241 QPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN 300
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
N SW+M +EM+KNSE+FYQ LK+PYQ+V+IVSGALNDAAAKK DLEAWFP+S+T+RELV
Sbjct: 301 ENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELV 360
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVP 417
SCSNCTDYQ+RRLEIRYGQKKSNEQTKQYVH+LNSTLTATERTICCILENYQ+EDGV++P
Sbjct: 361 SCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIP 420
Query: 418 EVLQPFMGGKTFLPFKAKP-APEAKGKKSKA 447
EVLQPFMGG+TFLPFKAKP + KGKKSKA
Sbjct: 421 EVLQPFMGGETFLPFKAKPVVADTKGKKSKA 451
>sp|Q7KWQ2|SYSC_DICDI Serine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=serS PE=1 SV=1
Length = 451
Score = 507 bits (1306), Expect = e-143, Method: Compositional matrix adjust.
Identities = 251/441 (56%), Positives = 322/441 (73%), Gaps = 4/441 (0%)
Query: 2 LDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINK 61
LDI LFR +KGG P+ IR+SQ+ R+A+VD V E+I LDK ++ ++ ++N E K+NK
Sbjct: 3 LDIVLFRADKGGNPDLIRQSQKVRYANVDAVQEVIDLDKVVKETKYRLDNTNAEYAKLNK 62
Query: 62 QIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSND 121
+A K +G+ E++ + E+ Q + EV E ++ KL +GN+VH+SVP+ N+
Sbjct: 63 SVAMKKKAGESADEIIAQAEELNQSIIKLKAEVSEVELLLRKKLRPIGNIVHESVPIDNN 122
Query: 122 EANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALI 181
E NN I++TWGE +T L +H EL+E++ D ++G ++G R ++LKG GV LNQA+I
Sbjct: 123 EDNNQIIKTWGECKTSEGLLHHHELLEMIDGYDPERGTLVSGHRCYFLKGIGVLLNQAII 182
Query: 182 NFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLC 241
NF L + K+ L TPFFM K+VMAK AQL QFD+ELYKVTG+ ++KYLIAT+EQP+
Sbjct: 183 NFALMHMTKRGSVPLQTPFFMNKDVMAKTAQLEQFDDELYKVTGDNEEKYLIATSEQPIS 242
Query: 242 AYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDS 301
A+H D+WI +LP +Y GYS+CFRKEAGSHGRDT GIFRVHQFEK+EQFCIT P S
Sbjct: 243 AFHQDEWIEEKDLPKKYVGYSTCFRKEAGSHGRDTWGIFRVHQFEKIEQFCITEP--EKS 300
Query: 302 WDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSN 361
WDM EEMI NSE+FYQ L IPY+VV IVSGALN+AA+KK DLE WFP YRELVSCSN
Sbjct: 301 WDMMEEMINNSEQFYQELGIPYRVVNIVSGALNNAASKKYDLEGWFPGYNQYRELVSCSN 360
Query: 362 CTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQ 421
CTDYQSR LEIR G KK +Q K+YVH+LNSTL AT R ICCILENYQ E G+ VP L+
Sbjct: 361 CTDYQSRDLEIRCGMKKQGQQQKKYVHMLNSTLAATTRVICCILENYQTEGGITVPVPLR 420
Query: 422 PFMGGKTFLPFKAKPAPEAKG 442
P++ GK F+PF K AP+ K
Sbjct: 421 PYL-GKDFIPF-VKAAPKQKA 439
>sp|O14018|SYSC_SCHPO Serine--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC29A4.15 PE=3 SV=1
Length = 450
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 250/455 (54%), Positives = 324/455 (71%), Gaps = 15/455 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDINLF+ EKGG PE IRESQR+R A V +VD++I + K+W L+F+++N K +N++
Sbjct: 1 MLDINLFQVEKGGNPEIIRESQRKRGADVGVVDKVIEMYKEWVSLRFELDNTNKSINRVQ 60
Query: 61 KQIAQLKLSGK-DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVV---GNLVHDSV 116
K+I LK+ K D SE++ + N + ++ K+ + + A K L VV GN+VHDSV
Sbjct: 61 KEIG-LKMKAKEDASELLEEKNSLTER---KKNLIEQETAKNKEMLNVVSSIGNIVHDSV 116
Query: 117 PVSNDEANNAIVRTWGEKRTEPKLKN---HVELVELLGIADLKKGADIAGGRGFYLKGDG 173
PVS DE NN I+R W + + KN H E++ L D ++G ++G RG++L+ G
Sbjct: 117 PVSMDEDNNEIIRKWAPEGVTVEKKNCLSHHEVLTRLDGYDPERGVKVSGHRGYFLRQYG 176
Query: 174 VRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLI 233
V N ALI +GLDFLEK+ Y L P + K+VMAK AQL QFDEELYKV +++YLI
Sbjct: 177 VFFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTAQLEQFDEELYKVIDGDEERYLI 236
Query: 234 ATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
AT+EQP+ AYH +W PSE LP++YAGYS+C+R+EAGSHGRD GIFRVH FEK+EQF
Sbjct: 237 ATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHGRDAWGIFRVHAFEKIEQF 296
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
+T P SW+ EMI ++E+FY+ L++PY++VAIVSGALN+AAAKK DLEAWFP
Sbjct: 297 VLTDPE--KSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKKYDLEAWFPFQG 354
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
Y+ELVSCSNCTDYQSR LEIR G KK ++ K+YVH LNSTL ATER +CCILENYQ
Sbjct: 355 EYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCILENYQTP 414
Query: 412 DGVEVPEVLQPFMGGKTFLPFKAKPAPEAKGKKSK 446
DGV VP+VLQP+MGGKTFLPF + + KK K
Sbjct: 415 DGVNVPKVLQPYMGGKTFLPFTKELPKNSTSKKGK 449
>sp|Q9HGT6|SYSC_CANAL Serine--tRNA ligase, cytoplasmic OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=SES1 PE=1 SV=1
Length = 462
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 253/465 (54%), Positives = 325/465 (69%), Gaps = 23/465 (4%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDIN F EKGG PE I+ SQ++R SV+LVDEII+ K+W +L+FD++ + K+LN +
Sbjct: 1 MLDINAFLVEKGGDPEIIKASQKKRGDSVELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQ 60
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWA--AVKAKLEVVGNLVHDSVPV 118
K+I + + +D +++ + ++ + KE+ +EA A +++K+ VGN+VH+SV
Sbjct: 61 KEIGKRFKAKEDAKDLIAEKEKLSNEK--KEIIEKEAEADKNLRSKINQVGNIVHESVVD 118
Query: 119 SNDEANNAIVRTWG-EKRTEP-----------KLKNHVELVELLGIADLKKGADIAGGRG 166
S DE NN +VRTW E +P KL +H L+ L G D ++G I G RG
Sbjct: 119 SQDEENNELVRTWTPENYKKPEQIAAATGAPAKLSHHEVLLRLDGY-DPERGVRIVGHRG 177
Query: 167 FYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGE 226
++L+ GV LNQALIN+GL FL K Y L P M KEVMAK AQL+QFDEELYKV
Sbjct: 178 YFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG 237
Query: 227 GDDKYLIATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQ 284
D+KYLIAT+EQP+ AYH +W P+E LP+RYAGYSSCFR+EAGSHG+D GIFRVH
Sbjct: 238 EDEKYLIATSEQPISAYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHA 297
Query: 285 FEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLE 344
FEK+EQF +T P SW+ + MI SEEFYQ L +PY+VV IVSG LN+AAAKK DLE
Sbjct: 298 FEKIEQFVLTEPE--KSWEEFDRMIGCSEEFYQSLGLPYRVVGIVSGELNNAAAKKYDLE 355
Query: 345 AWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCI 404
AWFP Q Y+ELVSCSNCTDYQSR LEIR G K+ N+Q K+YVH LNSTL+ATERTICCI
Sbjct: 356 AWFPFQQEYKELVSCSNCTDYQSRNLEIRCGIKQQNQQEKKYVHCLNSTLSATERTICCI 415
Query: 405 LENYQKEDGVEVPEVLQPFMGGKT-FLPF-KAKPAPEAKGKKSKA 447
LENYQKEDG+ +PEVL+ ++ G+ F+P+ K P KK+K
Sbjct: 416 LENYQKEDGLVIPEVLRKYIPGEPEFIPYIKELPKNTTSVKKAKG 460
>sp|Q18678|SYSC_CAEEL Probable serine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=srs-2 PE=3 SV=1
Length = 487
Score = 466 bits (1200), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/488 (51%), Positives = 325/488 (66%), Gaps = 46/488 (9%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LDI++FR EKGG PE IR+SQ+ RF LVDE+I LD+KWR+ +F + ++ N I+
Sbjct: 2 VLDIDMFRTEKGGNPEIIRKSQQDRFKDPKLVDEVIELDEKWRKERFVADQLNRQKNAIS 61
Query: 61 KQIAQL----KLSGKDFS---EMVTKTNEIKQQSADKEVEVR-------------EAWAA 100
K I + + G D S ++V + E+K + V+ + AA
Sbjct: 62 KAIGEKMKKKEPQGTDDSVADDIVARLAELKIDELSQLTVVQLKKLRVLVDEKSVQTAAA 121
Query: 101 VKA-------KLEVVGNLVHDSVPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIA 153
V A KL +GNL+H SV VS DEANN I RT+G+ T+ K +HV+LV ++
Sbjct: 122 VIANENARHEKLIQIGNLIHSSVVVSKDEANNKIERTFGDLSTKKKY-SHVDLVVMVDGF 180
Query: 154 DLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQL 213
D ++G +AGGRG++LKG V L QA+I L L K Y L+TPFFMRKEVM + AQL
Sbjct: 181 DGERGTVVAGGRGYFLKGPLVFLEQAIIQLALQRLNVKGYVPLYTPFFMRKEVMQEVAQL 240
Query: 214 AQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSC 264
+QFD+ELYKV+ +G D+KYLIAT+EQP+ AYH ++WI +ELPI+YAG S+C
Sbjct: 241 SQFDDELYKVSSKGSEIAGDTSVDEKYLIATSEQPIAAYHRNEWIKETELPIKYAGVSTC 300
Query: 265 FRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQ 324
FR+E GSHGRDT GIFRVHQFEK+EQF + SPN N+SW + +EMI N+E +YQ L+IPYQ
Sbjct: 301 FRQEVGSHGRDTRGIFRVHQFEKIEQFVLCSPNDNESWTLFDEMIGNAESYYQELQIPYQ 360
Query: 325 VVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTK 384
VV IVSG LN+AAAKK DLEAWFP S YRELVSCSNC DYQSRRL++RYGQ K
Sbjct: 361 VVNIVSGELNNAAAKKFDLEAWFPGSGAYRELVSCSNCLDYQSRRLKVRYGQTKKLSGEV 420
Query: 385 QYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPFKAKPAP---- 438
+VH+LN+T+ AT R IC ILEN Q E+G+ VP +Q +M +TF+PF KPAP
Sbjct: 421 PFVHMLNATMCATTRVICAILENNQTEEGINVPTAIQQWMPENYRTFIPF-VKPAPIDED 479
Query: 439 --EAKGKK 444
+A GKK
Sbjct: 480 AKKATGKK 487
>sp|Q6P799|SYSC_RAT Serine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Sars PE=1
SV=3
Length = 512
Score = 457 bits (1177), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/477 (50%), Positives = 316/477 (66%), Gaps = 42/477 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGK--------------DFSEMVTKTNEIKQQSADKEV-----EVREAWAAV 101
K I + K+ K +F ++ T + S K+V E +
Sbjct: 62 KTIGE-KMKKKEPVGEDESIPEDVLNFDDLTADTLAALKVSQIKKVRLLVDEAIQKCDGE 120
Query: 102 KAKLEV--------VGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGI 152
+ KLE +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++
Sbjct: 121 RVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDG 179
Query: 153 ADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQ 212
+ +KGA +AG RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQ
Sbjct: 180 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQ 239
Query: 213 LAQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSS 263
L+QFDEELYKV G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG+S+
Sbjct: 240 LSQFDEELYKVIGKGSEKSDDSSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGFST 299
Query: 264 CFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPY 323
CFR+E GSHGRDT GIFRVHQFEK+EQF +SP+ N SW+M +EMI +EEFYQ L IPY
Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMITTAEEFYQSLGIPY 359
Query: 324 QVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQT 383
+V IVSG+LN AA+KKLDLEAWFP S +RELVSCSNCTDYQ+RRL IRYGQ K
Sbjct: 360 HIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDK 419
Query: 384 KQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPFKAKPAP 438
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM G + +PF KPAP
Sbjct: 420 VEFVHMLNATMCATTRTICAILENYQTEKGIVVPEKLREFMPPGLQELIPF-VKPAP 475
>sp|Q4R4U9|SYSC_MACFA Serine--tRNA ligase, cytoplasmic OS=Macaca fascicularis GN=SARS
PE=2 SV=3
Length = 514
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 242/477 (50%), Positives = 315/477 (66%), Gaps = 42/477 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGK--------------DFSEMVTKTNEIKQQSADKEVEVREAWAAVKA--- 103
K I + K+ K +F ++ + S K+V + A +K
Sbjct: 62 KTIGE-KMKKKEPVEDDESVPENVLNFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 104 --KLEV--------VGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGI 152
KLE +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV ++
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDG 179
Query: 153 ADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQ 212
+ +KGA +AG RG++LKG V L QALI + L L + YT ++TPFFMRKEVM + AQ
Sbjct: 180 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQEVAQ 239
Query: 213 LAQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSS 263
L+QFDEELYKV G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+
Sbjct: 240 LSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLST 299
Query: 264 CFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPY 323
CFR+E GSHGRDT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY
Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPY 359
Query: 324 QVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQT 383
+V IVSG+LN AA+KKLDLEAWFP S +RELVSCSNCTDYQ+RRL IRYGQ K
Sbjct: 360 HIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDK 419
Query: 384 KQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPFKAKPAP 438
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM G + +PF KPAP
Sbjct: 420 VEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQELIPF-VKPAP 475
>sp|P26638|SYSC_MOUSE Serine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Sars PE=2 SV=3
Length = 512
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/480 (50%), Positives = 314/480 (65%), Gaps = 48/480 (10%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKA----------------- 103
K I + K+ K E V + + + + +A AA+K
Sbjct: 62 KTIGE-KMKKK---EAVGDDESVPENVLNFDDLTADALAALKVSQIKKVRLLIDEAIQKC 117
Query: 104 -----KLEV--------VGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVEL 149
KLE +GNL+H SVP+SNDE A+N + R WG+ K +HV+LV +
Sbjct: 118 DGERVKLEAERFENLREIGNLLHPSVPISNDEDADNKVERIWGDCTVRKKY-SHVDLVVM 176
Query: 150 LGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAK 209
+ + +KGA +AG RG++LKG V L QALI + L L + YT ++TPFFMRKEVM +
Sbjct: 177 VDGFEGEKGAVVAGSRGYFLKGPLVFLEQALIQYALRTLGSRGYTPIYTPFFMRKEVMQE 236
Query: 210 CAQLAQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAG 260
AQL+QFDEELYKV G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG
Sbjct: 237 VAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAG 296
Query: 261 YSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLK 320
S+CFR+E GSHGRDT GIFRVHQFEK+EQF +SP+ N SW+M +EMI +EEFYQ L
Sbjct: 297 LSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDEMIATAEEFYQSLG 356
Query: 321 IPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSN 380
IPY +V IVSG+LN AA+KKLDLEAWFP S +RELVSCSNCTDYQ+RRL IRYGQ K
Sbjct: 357 IPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKM 416
Query: 381 EQTKQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPFKAKPAP 438
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM G + +PF KPAP
Sbjct: 417 MDKVEFVHMLNATMCATTRTICAILENYQAEKGIAVPEKLREFMPPGLQELIPF-VKPAP 475
>sp|P07284|SYSC_YEAST Serine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SES1 PE=1 SV=2
Length = 462
Score = 454 bits (1167), Expect = e-127, Method: Compositional matrix adjust.
Identities = 241/447 (53%), Positives = 306/447 (68%), Gaps = 18/447 (4%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDIN F E+KGG PE IR+SQ+ R ASV++VDEIIS K W + +F+++ K+ NK+
Sbjct: 1 MLDINQFIEDKGGNPELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQ 60
Query: 61 KQIAQLKLSGK-DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVS 119
K I LK K D S ++ + ++ QQ + + ++ +K K+ VGN+VH SV VS
Sbjct: 61 KDIG-LKFKNKEDASGLLAEKEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVS 119
Query: 120 NDEANNAIVRTWGEKRTE-----------PKLKNHVELVELLGIADLKKGADIAGGRGFY 168
NDE NN +VRTW + E P +H E++ L D +G I G RG++
Sbjct: 120 NDEENNELVRTWKPEDLEAVGPIASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYF 179
Query: 169 LKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGD 228
+ GV LNQALIN+GL FL K Y L P M KE+M+K AQL++FDEELYKV D
Sbjct: 180 FRNYGVFLNQALINYGLQFLAAKGYIPLQAPVMMNKELMSKTAQLSEFDEELYKVIDGED 239
Query: 229 DKYLIATAEQPLCAYHIDDWIH-PSE-LPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFE 286
+KYLIAT+EQP+ AYH +W P E LPI Y GYSSCFR+EAGSHG+D G+FRVH FE
Sbjct: 240 EKYLIATSEQPISAYHSGEWFEKPQEQLPIHYVGYSSCFRREAGSHGKDAWGVFRVHAFE 299
Query: 287 KVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAW 346
K+EQF IT P SW+ E+MI SEEFY+ LK+PY++V IVSG LN+AAAKK DLEAW
Sbjct: 300 KIEQFVITEPE--KSWEEFEKMISYSEEFYKSLKLPYRIVGIVSGELNNAAAKKYDLEAW 357
Query: 347 FPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILE 406
FP + Y+ELVSCSNCTDYQSR LEIR G KK ++ K+YVH LNSTL AT+R +CCILE
Sbjct: 358 FPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCLNSTLAATQRALCCILE 417
Query: 407 NYQKEDGVEVPEVLQPFMGGKT-FLPF 432
NYQ EDG+ VPEVL+ ++ G+ FLPF
Sbjct: 418 NYQTEDGLVVPEVLRKYIPGEPEFLPF 444
>sp|Q9GMB8|SYSC_BOVIN Serine--tRNA ligase, cytoplasmic OS=Bos taurus GN=SARS PE=2 SV=3
Length = 514
Score = 453 bits (1166), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/486 (51%), Positives = 318/486 (65%), Gaps = 42/486 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRESQ +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRESQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD-------FSEMV---------TKTNEIKQQSADKEVEVREAWA---AV 101
K I + K+ K+ E V T TN Q + V EA A
Sbjct: 62 KTIGE-KMKKKEPVGNDESIPEDVLNLDDLTADTLTNLKVSQIKKVRLLVDEAILKCDAE 120
Query: 102 KAKLEV--------VGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGI 152
+ KLE +GNL+H SVP+S+DE A+N + R WG+ K +HV+LV ++
Sbjct: 121 RIKLEAERFESLREIGNLLHPSVPISDDEDADNKVERIWGDCTVRKKY-SHVDLVVMVDG 179
Query: 153 ADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQ 212
+ +KGA +AG RG++LKG V L QALI F L L + YT ++TPFFMRKEVM + AQ
Sbjct: 180 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQFALRTLASRGYTPIYTPFFMRKEVMQEVAQ 239
Query: 213 LAQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSS 263
L+QFDEELYKV G+G ++KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+
Sbjct: 240 LSQFDEELYKVIGKGSEKSDDNSYEEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLST 299
Query: 264 CFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPY 323
CFR+E GSHGRDT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY
Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMIATAEEFYQSLGIPY 359
Query: 324 QVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQT 383
+V IVSG+LN AA+KKLDLEAWFP S +RELVSCSNCTDYQ+RRL IRYGQ K
Sbjct: 360 HIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDK 419
Query: 384 KQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPF-KAKPAPEA 440
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM G + +PF KA P +
Sbjct: 420 VEFVHMLNATMCATTRTICAILENYQTEKGILVPEKLKEFMPPGLQELIPFVKAAPIDQE 479
Query: 441 KGKKSK 446
KK K
Sbjct: 480 PSKKQK 485
>sp|P49591|SYSC_HUMAN Serine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=SARS PE=1 SV=3
Length = 514
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/477 (50%), Positives = 313/477 (65%), Gaps = 42/477 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD--------------FSEMVTKTNEIKQQSADKEVEVREAWAAVKA--- 103
K I + K+ K+ F ++ + S K+V + A +K
Sbjct: 62 KTIGE-KMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 104 --KLEV--------VGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGI 152
KLE +GNL+H SVP+SNDE +N + R WG+ K +HV+LV ++
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKY-SHVDLVVMVDG 179
Query: 153 ADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQ 212
+ +KGA +AG RG++LKG V L QALI + L L + Y ++TPFFMRKEVM + AQ
Sbjct: 180 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQ 239
Query: 213 LAQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSS 263
L+QFDEELYKV G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+
Sbjct: 240 LSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLST 299
Query: 264 CFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPY 323
CFR+E GSHGRDT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY
Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPY 359
Query: 324 QVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQT 383
+V IVSG+LN AA+KKLDLEAWFP S +RELVSCSNCTDYQ+RRL IRYGQ K
Sbjct: 360 HIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDK 419
Query: 384 KQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPFKAKPAP 438
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM G + +PF KPAP
Sbjct: 420 VEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQELIPF-VKPAP 475
>sp|Q5R9K9|SYSC_PONAB Serine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=SARS PE=2 SV=3
Length = 514
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/477 (50%), Positives = 313/477 (65%), Gaps = 42/477 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
+LD++LFR +KGG P IRE+Q +RF LVD+++ D +WR+ +F +N K N +
Sbjct: 2 VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCS 61
Query: 61 KQIAQLKLSGKD--------------FSEMVTKTNEIKQQSADKEVEVREAWAAVKA--- 103
K I + K+ K+ F ++ + S K+V + A +K
Sbjct: 62 KTIGE-KMKKKEPVGDDESVPENVLSFDDLTADALANLKVSQIKKVRLLIDEAILKCDAE 120
Query: 104 --KLEV--------VGNLVHDSVPVSNDE-ANNAIVRTWGEKRTEPKLKNHVELVELLGI 152
KLE +GNL+H SVP+SNDE +N + R WG+ K +HV+LV ++
Sbjct: 121 RIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCTVRKKY-SHVDLVVMVDG 179
Query: 153 ADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQ 212
+ +KGA +AG RG++LKG V L QALI + L L + Y ++TPFFMRKEVM + AQ
Sbjct: 180 FEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQ 239
Query: 213 LAQFDEELYKVTGEG---------DDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSS 263
L+QFDEELYKV G+G D+KYLIAT+EQP+ A H D+W+ P +LPI+YAG S+
Sbjct: 240 LSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLST 299
Query: 264 CFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPY 323
CFR+E GSHGRDT GIFRVHQFEK+EQF +SP+ N SW+M EEMI +EEFYQ L IPY
Sbjct: 300 CFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPY 359
Query: 324 QVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQT 383
+V IVSG+LN AA+KKLDLEAWFP S +RELVSCSNCTDYQ+RRL IRYGQ K
Sbjct: 360 HIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQTKKMMDK 419
Query: 384 KQYVHLLNSTLTATERTICCILENYQKEDGVEVPEVLQPFM--GGKTFLPFKAKPAP 438
++VH+LN+T+ AT RTIC ILENYQ E G+ VPE L+ FM G + +PF KPAP
Sbjct: 420 VEFVHMLNATMCATTRTICAILENYQTEKGITVPEKLKEFMPPGLQELIPF-VKPAP 475
>sp|Q2NEU9|SYS_METST Serine--tRNA ligase OS=Methanosphaera stadtmanae (strain DSM 3091)
GN=serS PE=3 SV=1
Length = 424
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/437 (48%), Positives = 290/437 (66%), Gaps = 17/437 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDI LFREE P KI +S+++RF V+++I D WR+ ++ N R E NK++
Sbjct: 1 MLDIKLFREE----PNKIFDSEKKRFRDTINVEKVIEYDNLWREGLQNLNNLRSEKNKLS 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K Q K G + E+++K+ ++ + E ++ E VGN++ ++VPVS+
Sbjct: 57 KSFKQAKKDG-NLEEVISKSKKVASDIKELEPKIEEYERIRDEYRYKVGNIIDENVPVSD 115
Query: 121 DEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
E +N ++RT G+ + EP NHV+L+ L+ AD + IAG R +YLK D + LN
Sbjct: 116 TEDDNEVIRTNGDFPSFDFEPL--NHVDLINLIDGADTDTASQIAGSRFYYLKQDILFLN 173
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
ALI F L+ L+ K YT L TPFF++ EV + ++L +F+E LYKV E +D YLIATAE
Sbjct: 174 LALIQFALNELKDKGYTPLQTPFFIKSEVAEETSELGEFEETLYKV--ENEDLYLIATAE 231
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
Q L A H ++ I +LP+RY S+CFRKEAGSHG+DTLGIFRVHQFEKVEQF +P
Sbjct: 232 QTLAALHRNEIIDSEDLPLRYCALSTCFRKEAGSHGKDTLGIFRVHQFEKVEQFIYATPE 291
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
+S HE++++ +E YQ L +PYQ+VAIVS ALND AA K DLEAWFP S TYRELV
Sbjct: 292 --NSTLEHEKLLEVTEGIYQKLGLPYQIVAIVSSALNDNAAIKYDLEAWFPGSGTYRELV 349
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEV 416
SC+NC DYQ+R++ RYG K+ Q +H LNST ATERTICCILENYQ+EDG +++
Sbjct: 350 SCTNCKDYQARKINTRYG--KAGAGDAQILHTLNSTAIATERTICCILENYQQEDGSIKI 407
Query: 417 PEVLQPFMGGKTFLPFK 433
P+VL P+M GKT + K
Sbjct: 408 PDVLIPYMNGKTIIEAK 424
>sp|Q8SS48|SYS_ENCCU Serine--tRNA ligase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU04_0750 PE=1 SV=1
Length = 429
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/431 (46%), Positives = 273/431 (63%), Gaps = 14/431 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+DINL R+ K EK+ ES+++RF V + LD+K ++ F ++ +N++N
Sbjct: 1 MIDINLIRDPK--TREKVVESEKKRFRDGLAVGKAYELDRKRIEMNFRLDQINTRINQLN 58
Query: 61 KQIAQLKLSGK-----DFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDS 115
++I GK D SE V + + ++ +V+ + ++ +GN++ S
Sbjct: 59 REIKSGYRQGKNKEDGDLSEKVAEIKGLSDEAKGLRDDVKAVEDELNKVMKGIGNIISPS 118
Query: 116 VPVSNDEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVR 175
V VSNDE +N IVR++ R K V + GA + G RG+YL G R
Sbjct: 119 VVVSNDEKDNPIVRSYRSSRNMQKNPRPF-CVLMKDFTHSVAGAKVMGHRGYYLSGKMAR 177
Query: 176 LNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIAT 235
L QAL + +DFLE K YT + TP +R++VM K +QL+ FD++LYKV DD YLIAT
Sbjct: 178 LAQALTRYAIDFLENKGYTYIQTPVMLRRDVMRKTSQLSDFDDQLYKVE---DDLYLIAT 234
Query: 236 AEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITS 295
+EQ L A ++D+ + P E+P ++ G S CFRKEAG+HG+D G+FRVHQFEK+EQF I
Sbjct: 235 SEQSLAALYMDERMVPQEVPKKFCGQSLCFRKEAGAHGKDNAGLFRVHQFEKIEQFVICG 294
Query: 296 PNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRE 355
P +S HEEMIK EEFYQ L I Y VV IVSG LNDAAA K DLEA+FP+++ YRE
Sbjct: 295 PE--ESQKYHEEMIKACEEFYQSLDISYNVVGIVSGELNDAAAIKYDLEAYFPSAEKYRE 352
Query: 356 LVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDGVE 415
LVSCSNCTDYQSR LEIRYG K N + K YVHLLN T+ A +R +CCI+ENYQ DG+
Sbjct: 353 LVSCSNCTDYQSRELEIRYGVVKENNR-KIYVHLLNGTMCAVQRALCCIVENYQTGDGIA 411
Query: 416 VPEVLQPFMGG 426
+P+VLQ + GG
Sbjct: 412 IPDVLQGYFGG 422
>sp|A9A4V3|SYS_NITMS Serine--tRNA ligase OS=Nitrosopumilus maritimus (strain SCM1)
GN=serS PE=3 SV=1
Length = 421
Score = 358 bits (918), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/429 (43%), Positives = 273/429 (63%), Gaps = 13/429 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD L +E+ P+ IR+ + R DL D +I D+K R+ + ++K N+I
Sbjct: 1 MLDPKLLKEK----PQVIRDMLKARAVDFDL-DGLIESDQKRREFIIKTDEFKKRRNEIG 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
+IAQ K +G+D S ++ + + + A E + E + V NLVH+SVPV
Sbjct: 56 NEIAQKKKAGEDTSTILDEMKNVSAELAKLESQQEEIESKYAKLAFTVPNLVHESVPVGP 115
Query: 121 DEANNAIVRTWGE-KRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
D+ N +R WGE + + K+ +H+++ E L + DL++ A +AG R +YLK D VRLNQ+
Sbjct: 116 DDTANKEMRKWGEIPQFDFKINDHIDMSENLDLVDLERAAKVAGARFYYLKNDLVRLNQS 175
Query: 180 LINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQP 239
LI+F LDFL +K Y+L+ P+ + + M F+E +YKV E +D Y+I T+E
Sbjct: 176 LIHFALDFLAEKEYSLVQPPYMINRSSMEGAVIADDFEEVIYKV--EEEDLYMIGTSEHA 233
Query: 240 LCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGN 299
+ A H + I +LPIRYAG S CFRKEAG+HGRD GIFRVHQF+K+EQF P
Sbjct: 234 MAAMHSKEIIEGKDLPIRYAGVSPCFRKEAGAHGRDQKGIFRVHQFDKIEQFVYARPE-- 291
Query: 300 DSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSC 359
DSW HE+M+ +EEFYQ L+IP++V+ + +G + +AK D+EAW +YRE+VSC
Sbjct: 292 DSWKEHEKMLAVAEEFYQKLEIPHRVMLLSTGDMGKISAKTYDIEAWMAGQNSYREIVSC 351
Query: 360 SNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPE 418
SNC DYQ+RRL+IR+ + K+NE T QY+H LNSTL AT R + I+EN+Q +DG +++P+
Sbjct: 352 SNCLDYQARRLKIRF-RDKTNEDT-QYIHTLNSTLVATTRVLVSIMENFQTKDGHIKIPQ 409
Query: 419 VLQPFMGGK 427
VLQ +MG +
Sbjct: 410 VLQSYMGNQ 418
>sp|O28244|SYS_ARCFU Serine--tRNA ligase OS=Archaeoglobus fulgidus (strain ATCC 49558 /
VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=serS PE=3
SV=1
Length = 453
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/432 (42%), Positives = 270/432 (62%), Gaps = 29/432 (6%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE + ESQRRR SVD+VD I LD+KWR+ V RK N++ + + + K G++ +
Sbjct: 12 PEILYESQRRRGLSVDIVDRAIELDRKWREELKRVNQLRKRRNELARAVKEAK--GEERA 69
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+++ + + ++ E E++ A ++ L + N++H+SVPV D++ N ++ WG+
Sbjct: 70 KVIEEAKAVSEEVKRAEEELKRLEAELEEVLLSIPNIIHESVPVGKDDSENVPIKYWGKA 129
Query: 135 R---------------------TEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDG 173
+ T+ K H + VE+ G ADL++ A +AG R +YL D
Sbjct: 130 KVYFEDVDAFVEMTQGMAEYEVTDVKPIGHADAVEIFGWADLERAAKVAGARFYYLLNDL 189
Query: 174 VRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLI 233
V L+ AL + LDFL K+ +T++ P+ MR+E + + F+E +YKV E +D YLI
Sbjct: 190 VWLDFALTMYALDFLRKEDFTIVSPPYMMRREAYSGVTAFSDFEEVIYKV--EDEDLYLI 247
Query: 234 ATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCI 293
AT+E P+ A H+ + + ELP+ YAG S CFRKEAG+HG+DT GIFRVHQF KVEQF
Sbjct: 248 ATSEHPIAAMHMREVLEERELPLLYAGVSPCFRKEAGAHGKDTKGIFRVHQFNKVEQFVF 307
Query: 294 TSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTY 353
P SW+ HE++I+N E+ +Q L IPY++V I +G L AAKK DLEAW PA Y
Sbjct: 308 CLPE--QSWEWHEKLIENVEKLWQGLGIPYRIVNICTGDLGIVAAKKYDLEAWMPAQAKY 365
Query: 354 RELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG 413
RE+VSCSNCTD+QS RL+IR+ +++ + +K +VH LNST AT R I I+EN+Q EDG
Sbjct: 366 REMVSCSNCTDWQSYRLDIRFAEER-GKPSKGFVHTLNSTAIATTRAITAIIENFQLEDG 424
Query: 414 -VEVPEVLQPFM 424
VE+P VL+ ++
Sbjct: 425 RVEIPRVLRKYL 436
>sp|O58441|SYS_PYRHO Serine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=serS PE=1
SV=2
Length = 455
Score = 337 bits (864), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 191/459 (41%), Positives = 268/459 (58%), Gaps = 34/459 (7%)
Query: 1 MLDINLFREEKGGIPEKIRES--QRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI L RE PE ++ +R V VDEI+ LD +WR ++ R E NK
Sbjct: 1 MLDIKLIREN----PELVKNDLIKRGELEKVKWVDEILKLDTEWRTKLKEINRLRHERNK 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I +I + + G+ E++ K+ EI ++ + E EV E + L + N+ H SVPV
Sbjct: 57 IAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPV 116
Query: 119 SNDEANNAIVRTWGEKRT---------------------EPKLKNHVELVELLGIADLKK 157
DE +N +R WG+ R E K K HV+L+E+LG AD +
Sbjct: 117 GKDENDNVPIRFWGKARVWKGHLERFLEQSQGKMEYEILEWKPKLHVDLLEILGGADFAR 176
Query: 158 GADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFD 217
A ++G R +YL + V L+ ALI F LD L +K +T + P+ +R+ V F+
Sbjct: 177 AAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFE 236
Query: 218 EELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTL 277
+ +YKV E +D YLI TAE PL H ++ + +LP+ Y G S CFRKEAG+ G+DT
Sbjct: 237 DVIYKV--EDEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTK 294
Query: 278 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAA 337
GIFRVHQF KVEQF + P +SW+ HE++I+N+EE +Q L+IPY+VV I +G L A
Sbjct: 295 GIFRVHQFHKVEQFVYSRPE--ESWEWHEKIIRNAEELFQELEIPYRVVNICTGDLGYVA 352
Query: 338 AKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTAT 397
AKK D+EAW P +RE+VS SNCTD+Q+RRL IR+ + ++ +YVH LNST AT
Sbjct: 353 AKKYDIEAWMPGQGKFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLNSTAIAT 410
Query: 398 ERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLPFKAK 435
R I ILEN+Q+EDG V +P+VL + G K +P + K
Sbjct: 411 SRAIVAILENHQEEDGTVRIPKVLWKYTGFKEIVPVEKK 449
>sp|Q0W8S5|SYS_UNCMA Serine--tRNA ligase OS=Uncultured methanogenic archaeon RC-I
GN=serS PE=3 SV=1
Length = 425
Score = 336 bits (862), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 265/434 (61%), Gaps = 13/434 (2%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRR--FASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI RE P+ +R R+R + VD++++ D + R +Q V+ R+ N+
Sbjct: 1 MLDIRFVRES----PDVVRADLRKRNDLEKLAWVDDLLAKDSQARAMQVKVDELRRRRNE 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I+++I + + +GKD S ++ + +I +Q + E E+ E+ V L + N++ DSVPV
Sbjct: 57 ISREINEARKAGKDTSALMAEARDIPRQIKEAETEMEESRNKVHYYLMRLPNILDDSVPV 116
Query: 119 SNDEANNAIVRTWGEK-RTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
D+ N V+ WGE + + ++KNH L G AD ++ A +AG ++LKG+ V L+
Sbjct: 117 GKDDTENVEVKRWGEPVQKDFEIKNHGLLAVEHGWADFERAAKVAGAGFYFLKGNMVLLD 176
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
AL F +D L K+ +T + P+ M ++ LA F++ +YK+ EGDD YLIAT+E
Sbjct: 177 MALQRFAMDLLVKRGFTPVTPPYMMNRKSYEGVTDLADFEKVMYKI--EGDDMYLIATSE 234
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
P+ A + + +LP+R AG S CFR+E G+HG DT G+FRVHQF K+EQF P
Sbjct: 235 HPIGAMYQGEIFEEKDLPLRLAGISPCFRREIGAHGLDTKGLFRVHQFHKIEQFVFCKPE 294
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
DSW +HEE++ N+E +Q L +PY VV I +G + AAKK D+E W P TY+E+V
Sbjct: 295 --DSWKIHEEILANAEAVFQQLGLPYHVVNICTGDIGTVAAKKYDIEVWMPRENTYKEVV 352
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEV 416
SCSNCT YQ+ RL I+ K E +K+YVH LNST AT R + ILEN Q++DG V +
Sbjct: 353 SCSNCTAYQATRLNIKVRDPKDFE-SKRYVHTLNSTAIATSRAMRAILENNQQKDGSVLI 411
Query: 417 PEVLQPFMGGKTFL 430
PEVL+P+M G +L
Sbjct: 412 PEVLRPYMNGLEYL 425
>sp|B6YWW5|SYS_THEON Serine--tRNA ligase OS=Thermococcus onnurineus (strain NA1) GN=serS
PE=3 SV=1
Length = 457
Score = 332 bits (852), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 188/461 (40%), Positives = 275/461 (59%), Gaps = 38/461 (8%)
Query: 1 MLDINLFREEKGGIPEKIRES--QRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI L RE P+ ++ +R + +DEI+ LDKKWR+ + RKE N+
Sbjct: 1 MLDIKLIREN----PDLVKGDLIKRGEIEKIKWIDEILELDKKWRENLRKINQLRKERNQ 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
+ QI + K +G+ +++ K+NEI +Q E EV E A + L + N+ H+SVP+
Sbjct: 57 LAVQIGKRKKAGEPIDDLLAKSNEIVKQIETLEKEVEELRAKIDYYLWRLPNITHESVPI 116
Query: 119 SNDEANNAIVRTWGEKRT-----------------------EPKLKNHVELVELLGIADL 155
D++ N +R WG+ + P+L HV+++E+L AD+
Sbjct: 117 GKDDSENVPIRFWGKAKVWEGFLETFKEQSLGKMDYEVIDWRPRL--HVDMLEILRGADI 174
Query: 156 KKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQ 215
++ A ++G R +YL + V L+ ALI F LD L +K + + P+ +R+ V
Sbjct: 175 ERAAKVSGSRFYYLLNELVILDLALIRFALDKLIEKGFIPVIPPYMVRRYVEEGVTSFGD 234
Query: 216 FDEELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRD 275
F++ +YKV EG+D YLI TAE PL H ++ + +LP+ Y G S CFRKEAG+ G+D
Sbjct: 235 FEDVIYKV--EGEDLYLIPTAEHPLAGMHANEILEGKDLPLLYVGISPCFRKEAGTAGKD 292
Query: 276 TLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALND 335
T GIFRVHQF KVEQF + P +SW+ HE++I+N+EE +Q L+IPY+VV I +G L
Sbjct: 293 TKGIFRVHQFHKVEQFVYSRPE--ESWEWHEKLIQNAEEIFQELEIPYRVVNICTGDLGY 350
Query: 336 AAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLT 395
AAKK D+EAW +RE+VS SNCT++Q+RRL IRY + K++E+ K +VH LNST
Sbjct: 351 VAAKKYDIEAWMAGQGKFREVVSASNCTEWQARRLNIRY-RDKTHEKPK-FVHTLNSTAI 408
Query: 396 ATERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLPFKAK 435
AT R I ILEN+Q E+G V++P+VL + G K LP K
Sbjct: 409 ATSRAIVAILENHQTEEGVVKLPKVLWKYTGFKEILPAHMK 449
>sp|C6A4A3|SYS_THESM Serine--tRNA ligase OS=Thermococcus sibiricus (strain MM 739 / DSM
12597) GN=serS PE=3 SV=1
Length = 455
Score = 332 bits (850), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 185/455 (40%), Positives = 274/455 (60%), Gaps = 34/455 (7%)
Query: 1 MLDINLFREEKGGIPEKIRES--QRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
M+DI L RE P+ I+ +R + +DEI+ LDKKWR+ ++ N R+E NK
Sbjct: 1 MIDIKLIREN----PDLIKGDLIKRGELEKLRWIDEILELDKKWRENLKEINNLRRERNK 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
+ +I + K SG+ E++ K++ I ++ + E E + L + N+ H+SVP+
Sbjct: 57 LAIEIGKRKKSGEAIDELIKKSDNIAKRIEEIEKENNIIREKIDYYLWRLPNITHESVPI 116
Query: 119 SNDEANNAIVRTWGEKR------------TEPKLKN---------HVELVELLGIADLKK 157
D+ N +R WG+ R ++ K+K H +L+ +G ADL++
Sbjct: 117 GKDDTENVPIRFWGKARVWEGHLETFLEQSQGKMKYETITWKPELHADLLPKIGGADLER 176
Query: 158 GADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFD 217
A ++G R FYL + V L+ +LI F LD L +K + + P+ +RK V F+
Sbjct: 177 AAKVSGARFFYLLNELVILDLSLIRFALDKLIEKGFIPVIPPYMVRKYVEEGVTSFGDFE 236
Query: 218 EELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTL 277
+ +YK+ EG+D YLI T+E PL H ++ + LPI YAG S CFRKEAG+ G+DT
Sbjct: 237 DVIYKI--EGEDLYLIPTSEHPLAGMHSNEILDGHNLPILYAGVSPCFRKEAGTAGKDTK 294
Query: 278 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAA 337
GIFRVHQF KVEQF P +SW+ HE++++N+EE +Q L+IPY++V I +G L AA
Sbjct: 295 GIFRVHQFHKVEQFVYARPE--ESWEWHEKLLQNAEEIFQALEIPYRIVNICTGDLGYAA 352
Query: 338 AKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTAT 397
AKK D+EAW A +RE+VSCSNCT++Q+RRL IR+ + K NE+ + +VH LNST AT
Sbjct: 353 AKKYDIEAWMSAQGKFREVVSCSNCTEWQARRLNIRF-RDKPNEKPR-FVHTLNSTAIAT 410
Query: 398 ERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLP 431
R I I+EN+Q+EDG V++P+ L P+ G K LP
Sbjct: 411 SRAIVAIIENFQEEDGTVKIPKALWPYTGFKEILP 445
>sp|Q9UZ21|SYS_PYRAB Serine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=serS PE=3 SV=1
Length = 455
Score = 331 bits (848), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 188/459 (40%), Positives = 268/459 (58%), Gaps = 34/459 (7%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRR--FASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI L RE PE ++ ++R + +DEI+ LD +WR ++ R E NK
Sbjct: 1 MLDIKLIREN----PELVKNDLKKRGELEKIKWIDEILKLDAEWRAKLKEINKLRHERNK 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I +I + + G+ E++ K+ EI ++ E EV E + L + N+ H SVP+
Sbjct: 57 IAIEIGKRRKKGEPVEELLAKSKEIVKRIESLEKEVEELKKKIDYYLWRLPNITHPSVPI 116
Query: 119 SNDEANNAIVRTWGEKRT---------------------EPKLKNHVELVELLGIADLKK 157
E +N +R WG+ R E + K HV+L+E+LG AD +
Sbjct: 117 GESEEDNVPIRFWGKARVWEGHLERFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFAR 176
Query: 158 GADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFD 217
A ++G R +YL + V L+ ALI F LD L KK +T + P+ +R+ V F+
Sbjct: 177 AAKVSGSRFYYLLNEIVILDLALIRFALDELIKKGFTPVIPPYMVRRFVEEGSTTFEDFE 236
Query: 218 EELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTL 277
+ +YKV EG+D YLI TAE PL H ++ + +LP+ Y G S CFRKEAG+ G+DT
Sbjct: 237 DVIYKV--EGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGISPCFRKEAGTAGKDTK 294
Query: 278 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAA 337
GIFRVHQF KVEQF + P +SW+ HE +I+N+EE +Q L+IPY+VV I +G L A
Sbjct: 295 GIFRVHQFHKVEQFVYSRPE--ESWEWHERIIRNAEELFQKLEIPYRVVNICTGDLGYVA 352
Query: 338 AKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTAT 397
AKK D+EAW P +RE+VS SNCTD+Q+RRL IR+ + ++ +YVH LNST AT
Sbjct: 353 AKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLNSTAIAT 410
Query: 398 ERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLPFKAK 435
R I ILEN+Q+EDG V++P+VL + G K +P + K
Sbjct: 411 SRAIVAILENHQEEDGTVKIPKVLWKYTGFKEIVPVEKK 449
>sp|A0RTS8|SYS_CENSY Serine--tRNA ligase OS=Cenarchaeum symbiosum (strain A) GN=serS
PE=3 SV=1
Length = 418
Score = 331 bits (848), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 256/426 (60%), Gaps = 13/426 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD ++ R P+ + + + R DL D ++ D++ R ++ R+E N
Sbjct: 1 MLDPHILRSR----PKDVSDMLQARNVDFDL-DALLDADERRRYFMQLADDMRQERNFAG 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
+Q+AQ K G D + + + ++ ++ E E + A + + N++ SVP
Sbjct: 56 RQVAQFKRDGVDTTAAIKEMKDLSEKLYQAEGEQQSAESEYLELAWTIPNMIDKSVPRGP 115
Query: 121 DEANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQAL 180
DE N ++R W T K H EL G+ D+K+ A ++G R +YLKG VRLNQAL
Sbjct: 116 DETANVVLRKWVGTPTPSVPKGHEELAVGRGLLDMKRAAKVSGARFYYLKGSLVRLNQAL 175
Query: 181 INFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPL 240
I+ LDFL + YTL+ P+ +R+ M F++ +YK+ E DD YLI T+E +
Sbjct: 176 ISHSLDFLGSRGYTLVQPPYLIRRNAMEGAIIAEDFEDVIYKI--EDDDLYLIGTSEHAM 233
Query: 241 CAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGND 300
A H D+ I LP+RYAG S CFRKEAG+HG+D GIFRVHQF+K+EQF + P D
Sbjct: 234 AAMHSDEIIEGG-LPLRYAGVSPCFRKEAGAHGKDQKGIFRVHQFDKIEQFVFSKP--ED 290
Query: 301 SWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCS 360
SW H+ M++ +EEFYQ L IPY+VV + SG + +AK D+E W A YRE+VSCS
Sbjct: 291 SWREHDRMLEITEEFYQGLGIPYRVVLLSSGDMGKVSAKTYDIECWMAAQDAYREVVSCS 350
Query: 361 NCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEV 419
NC D+QSRRL++R+ + +++E T QYVH LNSTL AT R + CI+EN+Q+ DG + VP+
Sbjct: 351 NCLDFQSRRLKVRF-RDRTDEDT-QYVHTLNSTLAATSRLLACIIENFQEADGTIRVPQP 408
Query: 420 LQPFMG 425
LQ ++G
Sbjct: 409 LQKYVG 414
>sp|C5A226|SYS_THEGJ Serine--tRNA ligase OS=Thermococcus gammatolerans (strain DSM 15229
/ JCM 11827 / EJ3) GN=serS PE=3 SV=1
Length = 455
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/461 (40%), Positives = 275/461 (59%), Gaps = 38/461 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFAS--VDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI L RE+ PE +++ +R + V +DEI+ LD+KWR+ + RKE N+
Sbjct: 1 MLDIKLIREK----PELVKKDLIKRGETEKVKWIDEILELDRKWRENLKKINQLRKERNQ 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
+ QI + K +G+ +++ ++NEI +Q + E EV + L + N+ H+SVPV
Sbjct: 57 LAVQIGKRKKAGEPIEDLLARSNEIVKQIEELEKEVEALKKKIDYYLWRLPNITHESVPV 116
Query: 119 SNDEANNAIVRTWGEKRT-----------------------EPKLKNHVELVELLGIADL 155
D+ N +R WG+ + P+L HV+++ELL ADL
Sbjct: 117 GKDDTENVPIRFWGKAKVWEGFLESFKEQSLGKMDYEVLSWRPRL--HVDMLELLRGADL 174
Query: 156 KKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQ 215
++ A ++G R +YL + V L+ ALI F LD L +K +T + P+ +R+ V
Sbjct: 175 ERAAKVSGSRFYYLLNELVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGATTFED 234
Query: 216 FDEELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRD 275
F++ +YKV EG+D YLI TAE PL H ++ + +LP+ Y G S CFRKEAG+ G+D
Sbjct: 235 FEDVIYKV--EGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKD 292
Query: 276 TLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALND 335
T GIFRVHQF KVEQF + P +SW+ HE++I N+EE +Q L+IPY+VV I +G L
Sbjct: 293 TKGIFRVHQFHKVEQFVYSRPE--ESWEWHEKIIANAEELFQELEIPYRVVNICTGDLGY 350
Query: 336 AAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLT 395
AAKK D+EAW +RE+VS SNCTD+Q+RRL IR+ + K++E+ K +VH LNST
Sbjct: 351 VAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF-RDKTHEKPK-FVHTLNSTAI 408
Query: 396 ATERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLPFKAK 435
AT R I ILEN+Q E+G V++P+ L + G K LP K
Sbjct: 409 ATSRAIVAILENHQTEEGVVKLPKALWKYTGFKEILPASMK 449
>sp|Q970Y4|SYS_SULTO Serine--tRNA ligase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM
10545 / NBRC 100140 / 7) GN=serS PE=3 SV=1
Length = 453
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 186/446 (41%), Positives = 262/446 (58%), Gaps = 38/446 (8%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
P+K++E +RRF V LVD + LDKKWRQ +VE R E N I+ I + K ++
Sbjct: 13 PDKLKEYIKRRFIDVSLVDRAVELDKKWRQTLQEVEKLRHEHNVISSSIPKAK--PEERQ 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
E++ K E+ + +KE E+ L + N+V DS P+ DE + +R WG+
Sbjct: 71 ELIKKAKELLKALEEKEKELDNIENERDNILMQLPNIVDDSAPIGPDETYSVPIRFWGKF 130
Query: 135 RTEPK--------LKN--------------HVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ K LK H +++E +L + D KK A+++G R +YL
Sbjct: 131 KVYEKDEAEFLSQLKGNRVDYEIIHWKPVGHADMLENVLKLGDTKKAAEVSGARFYYLFD 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+N+ +D + K YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDIALLNYAIDTMTSKGYTLVLPPYMLRGEVIKSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE P+ A + + I +LP++Y G S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHPIAALYFKEEIPKEKLPLKYVGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
+SP DSW +HEE+I+N+EE +Q L +PY+V+ I +G L AAKK DLE W PA
Sbjct: 309 IFSSPE--DSWKLHEELIRNAEEIFQGLGLPYRVINIATGDLGACAAKKYDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNC D+Q+ R+ IRY +K K YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCLDWQAYRMRIRYVEKGGK---KGYVHTLNSTAIASTRTITAILENYQRE 423
Query: 412 DG-VEVPEVLQPFMGGKTFLPFKAKP 436
DG VE+P+VL+ ++ PF P
Sbjct: 424 DGVVEIPKVLKKYLE-----PFSRAP 444
>sp|Q8U1K2|SYS_PYRFU Serine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM
3638 / JCM 8422 / Vc1) GN=serS PE=3 SV=1
Length = 455
Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/459 (40%), Positives = 271/459 (59%), Gaps = 34/459 (7%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRR--FASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDINL R PE ++ ++R + +DEI+ LD++WR+ ++ R E NK
Sbjct: 1 MLDINLIRNN----PELVKNDLKKRGELDKIAWIDEILRLDEEWRKKLKEINRLRHERNK 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I +I + K +G+ +++ K+ EI ++ + E EV E + L + N+ H SVPV
Sbjct: 57 IAIEIGKRKKAGEPVEDLLAKSKEIVKRIEELEKEVEELRKRIDYYLWRLPNITHPSVPV 116
Query: 119 SNDEANNAIVRTWGEKRT---------------------EPKLKNHVELVELLGIADLKK 157
DE +N +R WG+ + E + K HV+L+E+LG AD +
Sbjct: 117 GKDENDNVPIRFWGKAKVWKGHLESFLEQSQGKMEYEVLEWRPKLHVDLLEILGGADFAR 176
Query: 158 GADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFD 217
A ++G R +YL + V L+ ALI F LD L +K +T + P+ +R+ V F+
Sbjct: 177 AAKVSGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTTFEDFE 236
Query: 218 EELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTL 277
+ +YKV EG+D YLI TAE PL H ++ + +LP+ Y +S CFRKEAG+ G+DT
Sbjct: 237 DVIYKV--EGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVAFSPCFRKEAGTAGKDTK 294
Query: 278 GIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAA 337
GIFRVHQF KVEQF + P +SW+ HE +++N+EE +Q L+IPY+VV I +G L A
Sbjct: 295 GIFRVHQFHKVEQFVYSRPE--ESWEWHERLVRNAEELFQELEIPYRVVNICTGDLGYVA 352
Query: 338 AKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTAT 397
AKK D+EAW P +RE+VS SNCTD+Q+RRL IR+ + ++ +YVH LNST AT
Sbjct: 353 AKKYDIEAWMPGQGRFREVVSASNCTDWQARRLNIRF--RDRTDEKPRYVHTLNSTAIAT 410
Query: 398 ERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLPFKAK 435
R I ILEN+Q+EDG V++P L + G K +P + K
Sbjct: 411 SRAIVAILENHQQEDGTVKIPRALWKYTGFKEIVPVEKK 449
>sp|A3CTP4|SYS_METMJ Serine--tRNA ligase OS=Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1) GN=serS PE=3 SV=1
Length = 425
Score = 326 bits (835), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/434 (39%), Positives = 257/434 (59%), Gaps = 13/434 (2%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDL--VDEIISLDKKWRQLQFDVENYRKELNK 58
ML++ R PE +R +R + L VDE++ +D++ R+L + + R N
Sbjct: 1 MLELKFVRAH----PEIVRADLTKRGDTEKLAWVDEVLEMDRRARELTVAIGDLRNRRNV 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I+++I+Q + +G D +E++ + + ++ + E E AV+ +L + N++H+SVPV
Sbjct: 57 ISREISQARKAGNDITELLAEAAGLPERIKEVETERETLTEAVRYRLMRLPNILHESVPV 116
Query: 119 SNDEANNAIVRTWGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
D++ N +R WGE L+NH L G AD ++ A IAG ++LKG L+
Sbjct: 117 GKDDSENVEIRRWGEPEIPAFDLENHGALAVEHGWADFERAAKIAGSGFYFLKGRLALLD 176
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
AL F +D L + YT + P+ M + LA F+ +Y++ GE D+YLIAT+E
Sbjct: 177 MALQRFAMDILVEHGYTPIIPPYMMNRAAYEGVTDLADFENVMYRIDGE--DEYLIATSE 234
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
P+ A + D+ +LP+R AG S CFR+E G+HG DT G+FRVHQF KVEQF +P
Sbjct: 235 HPMAAMYCDEIFEEKDLPLRLAGLSPCFRREIGAHGLDTKGLFRVHQFHKVEQFIYATPE 294
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
SWD+HEE++ N+EE +Q L +PY++V+I +G + AAKK DLE W P + YRE V
Sbjct: 295 --QSWDLHEELMANAEEVFQRLGLPYRIVSICTGDIGTVAAKKYDLEVWMPREERYREAV 352
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEV 416
SCSNCT YQ+ RL I+ + + K+YVH LNST AT R I ILEN Q EDG V +
Sbjct: 353 SCSNCTAYQAVRLNIKV-RNPTEFTEKRYVHTLNSTAIATSRAIRAILENNQNEDGSVTI 411
Query: 417 PEVLQPFMGGKTFL 430
P+ L+P++ G L
Sbjct: 412 PKALRPYLYGSETL 425
>sp|Q4J8I4|SYS_SULAC Serine--tRNA ligase OS=Sulfolobus acidocaldarius (strain ATCC 33909
/ DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=serS
PE=3 SV=1
Length = 458
Score = 325 bits (834), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/434 (42%), Positives = 259/434 (59%), Gaps = 33/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE ++E+ +RRF VD+ + LDKKWRQ +VE R E N I+ QI + K S
Sbjct: 13 PEVLKENLKRRFIDTSTVDKAVELDKKWRQTLQEVERLRHEHNLISSQIPKAPKEQK--S 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGE- 133
E++ K E+ + DKE E+++ + L + NLVHDSVP+ DE+ + +R WG+
Sbjct: 71 ELINKAKELLKTLEDKEKELQKIEEERENLLLSLPNLVHDSVPIGPDESYSVPIRFWGKF 130
Query: 134 -----------KRTEP----------KLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
K+T K H +++E +L + D KK ++A R +YL
Sbjct: 131 KVYKDDVNEFLKQTNGHKVDYEVINWKPVGHADMLENVLRLGDTKKAGEVAASRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ + +D + + YTL+ P+ +R EV+ L F + +YK+ EG+D Y
Sbjct: 191 DIVWLDLALLLYAIDTITSRGYTLVLPPYMLRGEVIKSVIDLDTFKDAIYKI--EGEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + + I ELP++ G S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSIAALYYKEEIPKEELPLKLVGVSPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
+SP DSW HEEMI+N+EE ++ L +PY+V+ I SG L AAKK DLE W PA
Sbjct: 309 IFSSPE--DSWKYHEEMIENAEEIFRGLGLPYRVINIASGDLGAPAAKKYDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNC D+Q+ R+ IRY +K + K Y+H LNST A+ R I ILEN+QKE
Sbjct: 367 KFREMVSCSNCLDWQAYRMRIRYVEKNNK---KGYLHTLNSTAIASTRAITAILENFQKE 423
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 424 DGVVEVPKVLRKYL 437
>sp|C3NEQ7|SYS_SULIY Serine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=serS PE=3 SV=1
Length = 457
Score = 324 bits (831), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE+++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI KLSG++
Sbjct: 13 PEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIP--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + DKE E+ + L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEDKEKELEKIEVERDRLLSTLPNLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + I +LP+++AG S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N+ + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNK--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|C3NGY7|SYS_SULIN Serine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=serS PE=3 SV=1
Length = 457
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE+++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI KLSG++
Sbjct: 13 PEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIP--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + DKE E+ + L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + I +LP+++AG S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N+ + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNK--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|C3MQH9|SYS_SULIL Serine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=serS PE=3 SV=1
Length = 457
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE+++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI KLSG++
Sbjct: 13 PEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIP--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + DKE E+ + L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + I +LP+++AG S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N+ + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNK--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|C4KHR4|SYS_SULIK Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=serS PE=3 SV=1
Length = 457
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE+++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI KLSG++
Sbjct: 13 PEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIP--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + DKE E+ + L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + I +LP+++AG S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N+ + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNK--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|C3N6A0|SYS_SULIA Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=serS PE=3 SV=1
Length = 457
Score = 323 bits (829), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE+++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI KLSG++
Sbjct: 13 PEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIP--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + DKE E+ + L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + I +LP+++AG S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSIAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N+ + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNK--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|A7I890|SYS_METB6 Serine--tRNA ligase OS=Methanoregula boonei (strain 6A8) GN=serS
PE=3 SV=1
Length = 425
Score = 323 bits (828), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 171/423 (40%), Positives = 251/423 (59%), Gaps = 18/423 (4%)
Query: 10 EKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLS 69
E+ G PEKI VDEI++ D + R+L+ + R+ N I ++I + + +
Sbjct: 19 ERRGTPEKIA-----------WVDEILAKDARSRELKVQTDELRRRRNTIAREINEARKT 67
Query: 70 GKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVR 129
GKD + ++ + E+ Q+ + E E ++ +L + N++H+SVP D+ N +R
Sbjct: 68 GKDAAPLLREAAELPQKIKANDAEQEEISGIIRTRLMRLPNILHESVPKGKDDTENVEIR 127
Query: 130 TWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQALINFGLDFL 188
G RT + +LKNH +L G AD ++ A +G ++LKG V L+ AL F LD L
Sbjct: 128 RVGTPRTFDFELKNHGQLAADNGWADFERAAKTSGAGFYFLKGGLVMLDLALQRFALDLL 187
Query: 189 EKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQPLCAYHIDDW 248
KK +T + PF ++++ L F++ +YK+ +GDD YLIAT+E P+ A + D+
Sbjct: 188 GKKGFTPVIPPFMIKRDSYEGVTDLDDFEKVMYKI--DGDDTYLIATSEHPIAAMYQDEI 245
Query: 249 IHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEM 308
+LP+R G S CFR+E G+HG DT G+FRVHQF K+EQF P +SW +HEE+
Sbjct: 246 FEEKDLPLRLCGLSPCFRREIGAHGLDTKGLFRVHQFTKIEQFVFCRPE--NSWQIHEEL 303
Query: 309 IKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSCSNCTDYQSR 368
+ N+EE + L +PY VV I +G + AAKK D+EAW P Y+E+VSCSNCT YQ+
Sbjct: 304 LANAEEVFTKLGLPYHVVNICTGDIGTVAAKKYDIEAWMPRENAYKEVVSCSNCTSYQAA 363
Query: 369 RLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPEVLQPFMGGK 427
L IR + K N +TK VH LNST AT R + CILENYQ DG V +P+VL+ +M +
Sbjct: 364 SLNIRV-RDKENFETKHLVHTLNSTAIATSRALRCILENYQNRDGSVTIPDVLRQYMNDR 422
Query: 428 TFL 430
FL
Sbjct: 423 EFL 425
>sp|C3MW57|SYS_SULIM Serine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=serS PE=3 SV=1
Length = 457
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 264/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE+++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI KLSG++
Sbjct: 13 PEELKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVERLRHQHNVLSSQIP--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + DKE E+ + L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEDKEKELEKIEVERDRLLSSLPNLVADDVPNGPDDSYNIPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVEEFLRQTKDANVNYEIIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ AL+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFALLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE + A + I +LP+++AG S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHSVAAMFFKEEIEKDKLPLKFAGISPAFRKEAGAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHAELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N+ + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNK--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|Q2FS27|SYS_METHJ Serine--tRNA ligase OS=Methanospirillum hungatei (strain JF-1 / DSM
864) GN=serS PE=3 SV=1
Length = 425
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 260/434 (59%), Gaps = 13/434 (2%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRR--FASVDLVDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI R P+ IRE ++R + +D+++ D + R+L R+ N
Sbjct: 1 MLDIRFVRAN----PDAIREDLKKRNDMEKLAWIDDLLVQDIRHRELIGQTNELRRRRNS 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I+ I + K +G+D S ++ + + + + E E+ E ++ L + N++H+SVPV
Sbjct: 57 ISYDINRAKKAGEDASALIAEAAGLPGRIKENEAEMEEISKKIRYYLMRIPNILHESVPV 116
Query: 119 SNDEANNAIVRTWGEKRTEP-KLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
D+ N V+ +G RT +LKNH +L AD ++ +G ++LKG+ V L+
Sbjct: 117 GADDTQNVEVKRYGTPRTFTFELKNHGQLAADNDWADFERATKTSGAGFYFLKGNLVLLD 176
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
AL F LD L +K YT + P+ + ++ + L F++ +YK+ E DD YLIAT+E
Sbjct: 177 LALQRFSLDILMEKGYTPIIPPYMINRKSYEEVTDLDDFEKVMYKI--EDDDAYLIATSE 234
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
P+ A + D+ +LP+R AG S CFR+E GSHG DT G+FRVHQF KVEQF P+
Sbjct: 235 HPMAAMYQDEIFEEKDLPLRLAGLSPCFRREIGSHGLDTKGLFRVHQFHKVEQFVYCHPD 294
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
DSW +HEE+ +N+EE +Q L+IPY+VV I +G + AAKK D+EAW P YRE+V
Sbjct: 295 --DSWTIHEELRENAEEIFQKLEIPYRVVNICTGDIGTVAAKKYDIEAWMPRENEYREVV 352
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEV 416
SCSNCT YQ+ RL IR K+ E +KQ+VH LNST AT R + ILEN Q+EDG V +
Sbjct: 353 SCSNCTTYQAVRLNIRVRDKEDFE-SKQFVHTLNSTAIATSRAMRAILENNQQEDGSVVI 411
Query: 417 PEVLQPFMGGKTFL 430
P+VL+P+M K FL
Sbjct: 412 PKVLRPYMNDKEFL 425
>sp|Q6KZN5|SYS_PICTO Serine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027 /
DSM 9790 / JCM 10055 / NBRC 100828) GN=serS PE=3 SV=1
Length = 444
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 261/449 (58%), Gaps = 38/449 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+DI L R E +S R R ++DE LD +W++ + N + + N I
Sbjct: 1 MIDIKLLRLNS----EIFYKSCRDRGFDTRILDEFFELDNEWKENLKQLNNIKHDKNSIT 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAK--LEVVGNLVHDSVPV 118
+I++ SG D +++ K + + +E R+ VK L ++ NL+ D VP
Sbjct: 57 MEISRRIKSGDDINDLKLKVESLNIDI--QRLEGRQNEIDVKRNEILRLIPNLLADDVPR 114
Query: 119 SNDEANNAIVRTWGEKRT--------------------EPKLKNHVELVELLGIADLKKG 158
+ NN +VR +G R + + K+HV+L+ L +AD+++
Sbjct: 115 CFGDENNRLVRYYGRARVFSDDVKYFIENSGSGDYEEIDYRPKSHVDLISELNLADIERA 174
Query: 159 ADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDE 218
IAG R ++LK +L ALIN+ +DFL ++ YT+L PF + + M+ + F +
Sbjct: 175 GKIAGARFYFLKNRLFKLELALINYAVDFLSQRGYTVLEPPFMINYKSMSGATDIETFKD 234
Query: 219 ELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLG 278
LYK+ EGDD YLIATAE P+ + D+ + ELPIR +G S CFR+EAG+HG+DT G
Sbjct: 235 TLYKI--EGDDLYLIATAEHPIASMLQDEILMEDELPIRVSGVSPCFRREAGAHGKDTKG 292
Query: 279 IFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAA 338
IFRVHQF K+EQF P DSWD +E+++NSE+ Y+ LKIPY+VV + SG L + AA
Sbjct: 293 IFRVHQFNKIEQFVFCKPE--DSWDFFDELVRNSEDIYKSLKIPYRVVNVCSGELGNLAA 350
Query: 339 KKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATE 398
KK D+EAWFPA +RE+VS SN TDYQ+R L I+Y + N ++VH LNST ATE
Sbjct: 351 KKYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKYRSRDGN----RFVHTLNSTAIATE 406
Query: 399 RTICCILENYQKEDG--VEVPEVLQPFMG 425
R + I+EN+Q +G +++PEVL P+ G
Sbjct: 407 RILVAIMENFQDRNGKVIKIPEVLIPYTG 435
>sp|O66647|SYS_AQUAE Serine--tRNA ligase OS=Aquifex aeolicus (strain VF5) GN=serS PE=1
SV=1
Length = 425
Score = 322 bits (825), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 183/435 (42%), Positives = 266/435 (61%), Gaps = 15/435 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+DINL RE+ + E++ R V LVD+++ LDK+ R++ +E R E NK++
Sbjct: 1 MIDINLIREKPDYVKERL---ATRDKELVSLVDKVLELDKRRREIIKRLEALRSERNKLS 57
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K+I +LK GKD +E+ + E+K++ E E+R+ +K L + NL H SVPV
Sbjct: 58 KEIGKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPSVPVGE 117
Query: 121 DEANNAIVRTWGEKRT---EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
DE +N VR WGE R EPK H E+ E LGI D K+GA ++G R + G G RL
Sbjct: 118 DEKDNVEVRRWGEPRKFDFEPK--PHWEIGERLGILDFKRGAKLSGSRFTVIAGWGARLE 175
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
+ALINF LD KK Y + P ++ E++ QL +F+E+LYK E D+ YLI TAE
Sbjct: 176 RALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKC--ERDNLYLIPTAE 233
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
PL + ++ + LPI Y+ C+R+EAG++G+D GI R HQF+KVE I P+
Sbjct: 234 VPLTNLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPD 293
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
S+D E+++K++EE Q+L +PY+VV + +G L +AAK D+E WFP+ YRE+
Sbjct: 294 --TSYDELEKLVKDAEEVLQLLGLPYRVVELCTGDLGFSAAKTYDIEVWFPSQNKYREIS 351
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEV 416
SCSNC D+Q+RR+ R+ K+ + ++VH LN + A RT+ ILENYQ+EDG V V
Sbjct: 352 SCSNCEDFQARRMNTRFKDSKTGKN--RFVHTLNGSGLAVGRTLAAILENYQQEDGSVVV 409
Query: 417 PEVLQPFMGGKTFLP 431
PEVL+ ++G P
Sbjct: 410 PEVLRDYVGTDVIRP 424
>sp|Q5JE75|SYS_PYRKO Serine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=serS PE=3 SV=1
Length = 455
Score = 320 bits (821), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 188/461 (40%), Positives = 272/461 (59%), Gaps = 38/461 (8%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDL--VDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI L RE PE ++ +R + L +DEI+ LDKKWR+ + RKE N+
Sbjct: 1 MLDIKLIREN----PEIVKRDLIKRGETEKLKWIDEILELDKKWRENLKKINQLRKERNQ 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
+ QI + K +G+ +++ ++NEI +Q + E E E + L + N+ H+SVPV
Sbjct: 57 LAVQIGKRKKAGEPIDDLLKRSNEIVKQIEELEKENEELKKKIDYYLWRLPNITHESVPV 116
Query: 119 SNDEANNAIVRTWGEKRT-----------------------EPKLKNHVELVELLGIADL 155
+ +N +R WG+ + P+L HV+++ELL ADL
Sbjct: 117 GESDEDNVPIRFWGKAKVWEGFLETFKEQSLGKMEYEVLSWRPRL--HVDMLELLRGADL 174
Query: 156 KKGADIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQ 215
++ A ++G R +YL + V L+ ALI F LD L +K +T + P+ +R+ V
Sbjct: 175 ERAAKVSGARFYYLLNELVILDLALIRFALDKLIEKGFTPVIPPYMVRRFVEEGATTFDD 234
Query: 216 FDEELYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRD 275
F++ +YKV EG+D YLI TAE PL H ++ + +LP+ Y G S CFRKEAG+ G+D
Sbjct: 235 FEDVIYKV--EGEDLYLIPTAEHPLAGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKD 292
Query: 276 TLGIFRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALND 335
T GIFRVHQF KVEQF + P +SW+ HE +I N+EE +Q L+IPY+VV I +G L
Sbjct: 293 TKGIFRVHQFHKVEQFVYSRPE--ESWEWHERIIANAEEIFQALEIPYRVVNICTGDLGY 350
Query: 336 AAAKKLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLT 395
AAKK D+EAW +RE+VS SNCTD+Q+RRL IR+ + K++E+ + +VH LNST
Sbjct: 351 VAAKKYDIEAWMAGQGKFREVVSASNCTDWQARRLNIRF-RDKTHEKPR-FVHTLNSTAI 408
Query: 396 ATERTICCILENYQKEDG-VEVPEVLQPFMGGKTFLPFKAK 435
AT R I ILEN+Q E+G V++P+ L + G K LP K
Sbjct: 409 ATSRAIVAILENHQTEEGVVKLPKALWKYTGFKEILPAHMK 449
>sp|O33780|SYS_SULSO Serine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC 35092 /
DSM 1617 / JCM 11322 / P2) GN=serS PE=3 SV=2
Length = 457
Score = 315 bits (807), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/434 (41%), Positives = 263/434 (60%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE ++ + +RR V LVD+ + LDKKWRQ+ +VE R + N ++ QI+ KLSG++
Sbjct: 13 PEDLKNNLKRRAIDVSLVDKAVELDKKWRQVLQEVEKLRHQHNVLSSQIS--KLSGEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + ++ + + +KE E+ E L + NLV D VP D++ N ++ WG+
Sbjct: 71 KKIEESKNLLKILEEKEKELEEIENERDRLLSSLPNLVADDVPNGPDDSYNVPIKFWGKF 130
Query: 135 RT----------------------EPKLKNHVELVE-LLGIADLKKGADIAGGRGFYLKG 171
+ + K K H E++E +L + + K A+IAG R +YL
Sbjct: 131 KVYEGDVQEFLKQIKDAKVNYEVIKWKPKGHAEMLEDVLHLGNTLKAAEIAGSRFYYLFN 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D V L+ +L+ F +D++ ++ YTL+ P+ +R EV+ L F + +YK+ E +D Y
Sbjct: 191 DIVWLDFSLLLFAIDYITQQGYTLVLPPYMLRGEVIQSVIDLDTFKDAIYKI--ENEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE P+ A + I +LP+++AG S FRKEA + +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHPIAAMFFKEEIEKDKLPLKFAGISPAFRKEASAANKDLKGIFRVHQFHKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
++P DSW H E+I N+E +Q L++PY++V I SG L AAKK DLE W PA
Sbjct: 309 IFSTPE--DSWKYHSELITNAESIFQQLELPYRIVNIASGDLGACAAKKFDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IRY +K+N + YVH LNST A+ RTI ILENYQ+E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRYVDRKNNR--RGYVHTLNSTAIASTRTITAILENYQRE 424
Query: 412 DG-VEVPEVLQPFM 424
DG VEVP+VL+ ++
Sbjct: 425 DGVVEVPKVLRKYL 438
>sp|B1L5G0|SYS_KORCO Serine--tRNA ligase OS=Korarchaeum cryptofilum (strain OPF8)
GN=serS PE=3 SV=1
Length = 456
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 180/435 (41%), Positives = 250/435 (57%), Gaps = 36/435 (8%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
PE +RE+ RRRF +D+++ I LD+KWR+ ++ + R+ N+IN+ I + ++
Sbjct: 13 PEILRENLRRRFLPLDMLERAIELDRKWREAVTELNSLRERRNEINRSIPRADPGERE-- 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
E++ K EI ++ E + + + L + L+ DSVP+ +E N +R WG+
Sbjct: 71 ELIRKAKEIGEEIERLEDVLEKLSQERDSILMSMPALIDDSVPIGPNEDYNKPIRFWGKP 130
Query: 135 RT------------------------EPKLKNHVELVELLGIADLKKGADIAGGRGFYLK 170
+ EP L + EL +L D K +AG R FYL
Sbjct: 131 KVPRSKLDSFMEQTRGFNVEYELIDWEP-LGHADELEVMLKQVDTVKAGQLAGSRFFYLF 189
Query: 171 GDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDK 230
D V L QALI F LD + +K + + P+ MR++ L F++ +YKV EG+D
Sbjct: 190 KDIVWLEQALILFALDKISRKGFIPVIPPYMMRRDYYLGVVDLNTFEDSIYKV--EGEDL 247
Query: 231 YLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQ 290
YLIAT+E PL A H D ELP Y G S CFRKEAG+HG+DT GIFRVHQF KVEQ
Sbjct: 248 YLIATSEHPLVAMHAGDTFTEDELPRLYVGLSPCFRKEAGTHGKDTKGIFRVHQFTKVEQ 307
Query: 291 FCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPAS 350
+ P + W HE +I+N+EE Y+ L+IPY++V I SG L +AAKK DLE WFPA
Sbjct: 308 IVFSKPEESKYW--HERLIENAEEIYRELEIPYRIVNIASGDLGASAAKKYDLEGWFPAQ 365
Query: 351 QTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQK 410
YRELVSCSNC D+QS RL I+ +K E +VH LNST AT RTI I+EN+Q+
Sbjct: 366 GKYRELVSCSNCVDWQSYRLRIKLDRKGRRE----FVHTLNSTALATTRTISAIVENHQR 421
Query: 411 EDG-VEVPEVLQPFM 424
EDG V +P+ L+ ++
Sbjct: 422 EDGSVRIPKALRKYL 436
>sp|A2SRC6|SYS_METLZ Serine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=serS PE=3 SV=1
Length = 425
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 174/434 (40%), Positives = 252/434 (58%), Gaps = 13/434 (2%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDL--VDEIISLDKKWRQLQFDVENYRKELNK 58
MLDI R PE + +R + L VD ++ DK +R+L R N+
Sbjct: 1 MLDIKFVRAH----PEVVLADLEKRQDAEKLLWVDTVLEQDKLFRELTVKNNELRARRNQ 56
Query: 59 INKQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPV 118
I K+I K GKD + + + + D + + +A V+ L + N++H+SVP
Sbjct: 57 IAKEINAYKKEGKDPAPLFAEAKALPGLIKDNDDIMEKATEQVRYYLMRLPNILHESVPY 116
Query: 119 SNDEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLN 177
D+ N +V+ G R+ + +LKNH EL G AD ++ +G ++LKG+ L+
Sbjct: 117 GKDDTENVVVKKVGTPRSLDFELKNHGELAAANGWADFERATKTSGAGFYFLKGNLALLD 176
Query: 178 QALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE 237
AL F LD + K YT + P+ M ++ + L F++ +YK+ E DD YLIATAE
Sbjct: 177 MALQRFALDTIIAKGYTPIIPPYMMNRKSYEEVTDLGDFEKVMYKI--EDDDAYLIATAE 234
Query: 238 QPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPN 297
P+ A + D+ +LP++ G S CFR+E G+HG D+ G+FRVHQF K+EQF P
Sbjct: 235 HPMAAMYQDEIFEEKDLPLKMVGISPCFRREIGAHGLDSRGLFRVHQFTKIEQFIYCMPE 294
Query: 298 GNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELV 357
SW+MHEE++ N+EE + L +PY+VV I +G + AAKK D+EAW P YRE+V
Sbjct: 295 --KSWEMHEELLANAEEIFTKLGLPYRVVNICTGDIGTVAAKKYDMEAWMPRDNEYREVV 352
Query: 358 SCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEV 416
SCSNCT YQS RL IR + + ++KQ++H LNST AT R + CILENYQ EDG VE+
Sbjct: 353 SCSNCTAYQSVRLNIRV-RDAHDFESKQWLHTLNSTAVATSRALRCILENYQTEDGKVEI 411
Query: 417 PEVLQPFMGGKTFL 430
P+VL+P+M G +L
Sbjct: 412 PKVLRPYMNGLEYL 425
>sp|A4YI40|SYS_METS5 Serine--tRNA ligase OS=Metallosphaera sedula (strain ATCC 51363 /
DSM 5348) GN=serS PE=3 SV=1
Length = 455
Score = 314 bits (805), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 249/434 (57%), Gaps = 32/434 (7%)
Query: 15 PEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKINKQIAQLKLSGKDFS 74
P+ + ES R+R + L ++ + LDKKWR + +VE R E N ++ QI +LS ++
Sbjct: 13 PDSLMESLRKRNVNPQLAEKAVELDKKWRAILQEVEKLRHEHNVVSSQIP--RLSPEERK 70
Query: 75 EMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSNDEANNAIVRTWGEK 134
+ + + + KE E++ L + N+VH+SVPV D++ N ++ WG+
Sbjct: 71 KKIEEARNLLSIIEAKEKELKTIEEERDNILRTLPNVVHESVPVGPDDSYNVPIKVWGKF 130
Query: 135 RTEPKLKNHV-----------------------ELVELLGIADLKKGADIAGGRGFYLKG 171
R K N EL +L + + K ++AG R +YL
Sbjct: 131 RVYEKDVNEFLSQVKGLNPDYEIIKFKPVGHADELEAVLKLGNTAKAGEVAGSRFYYLFE 190
Query: 172 DGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKY 231
D L QALI + LD + K Y+L+ P+ +R EV+ L F + +YK+ EG+D Y
Sbjct: 191 DVAWLEQALIAYALDVITSKGYSLVIPPYMLRGEVIQSVIDLDTFKDAIYKI--EGEDLY 248
Query: 232 LIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQF 291
LIATAE P+ A + + I LP+RY G S FRKEAG+ +D GIFRVHQF KVEQF
Sbjct: 249 LIATAEHPIAALYFKEEIEAERLPLRYVGLSPAFRKEAGAANKDLKGIFRVHQFNKVEQF 308
Query: 292 CITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQ 351
+ P DSW HEE++ N+E+ +Q L++PY+VV I SG L AAKK DLE W PA
Sbjct: 309 IFSLPE--DSWKFHEELLGNAEQIFQGLELPYRVVNIASGDLGACAAKKYDLEVWMPAQA 366
Query: 352 TYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKE 411
+RE+VSCSNCTD+Q+ R++IR+ +K N K +VH LNST AT R I ILEN Q E
Sbjct: 367 KFREMVSCSNCTDWQAFRMKIRFVDRKKNR--KGFVHTLNSTAVATTRAITAILENNQLE 424
Query: 412 DG-VEVPEVLQPFM 424
DG V +P+VL+P++
Sbjct: 425 DGSVVIPKVLRPYL 438
>sp|Q82FK8|SYS1_STRAW Serine--tRNA ligase 1 OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=serS1 PE=3 SV=1
Length = 425
Score = 308 bits (789), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 255/441 (57%), Gaps = 22/441 (4%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+D+ L RE+ P+++R SQR R V LVD ++S D++ R + R E +
Sbjct: 1 MIDLRLLRED----PDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRSEQKALG 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K I K S ++ +E++ K ++K +VE EA K L +GNLVH VPV
Sbjct: 57 KLIP--KASPEERAELLKKAEQLKADVKAADVEQHEADEEAKRLLLQLGNLVHPDVPVGG 114
Query: 121 DE-----ANNAIVRTWGEKRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVR 175
+E + +R +G + EPK +H+EL E LG D+++GA ++G R +YL G G
Sbjct: 115 EEDFVVLETHGTIRDFGAEGFEPK--DHLELGEALGAIDVERGAKVSGSRFYYLTGVGAL 172
Query: 176 LNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIAT 235
L AL+N + + + + TP +R M L Q E +Y + E DD YL+ T
Sbjct: 173 LELALVNAAIAQATEAGFIPMLTPALVRPRAMEGTGFLGQASENVYHL--EKDDYYLVGT 230
Query: 236 AEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITS 295
+E PL AYH+D+ + +LP+RYAG+S CFR+EAG++G+DT GIFRVHQF+KVE F +
Sbjct: 231 SEVPLAAYHMDEILDADKLPMRYAGFSPCFRREAGTYGKDTRGIFRVHQFDKVEMFSYVA 290
Query: 296 PNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRE 355
P D+ + H+ +++ +++ L++P+QV+ + SG L +A +K D EAW P YRE
Sbjct: 291 P--EDAENEHKRLLEWEKQWLTGLELPFQVIDVASGDLGASATRKFDCEAWIPTQGKYRE 348
Query: 356 LVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-V 414
L S SNC +Q+RRL +R K Q + LN TL A RTI ILEN+Q DG V
Sbjct: 349 LTSASNCDSFQARRLSVRMRDGKK----VQPLATLNGTLCAVPRTIVAILENHQLPDGSV 404
Query: 415 EVPEVLQPFMGGKTFLPFKAK 435
VPE+L+P++GG+ L AK
Sbjct: 405 RVPEMLRPYLGGRELLEPVAK 425
>sp|Q979Z3|SYS_THEVO Serine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530 /
DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=serS PE=3
SV=1
Length = 441
Score = 305 bits (782), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/446 (37%), Positives = 255/446 (57%), Gaps = 33/446 (7%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+D+ L R + E ++ R ++D+ LD++WR + ++ R E N++
Sbjct: 1 MIDVKLLRSNR----ELFEKNCEYRGVDKAIIDQFFKLDEEWRSVNRELNGQRAEKNRMT 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
+ IA+ GK S + I ++ E ++RE L + NL+H+SVP+
Sbjct: 57 RAIAESLKRGKIVSNEKDRVELINEKIVSLEKKIREIEEERDRVLWTIPNLIHESVPICF 116
Query: 121 DEANNAIVRTWGEKRT---------------------EPKLKNHVELVELLGIADLKKGA 159
+ NN IVR G + + + K+HV+L + LGI DL+ A
Sbjct: 117 GDENNKIVRYVGHAKVYRDDEEEFLKGSGGNGDYEVIDERPKSHVDLGQELGIIDLESAA 176
Query: 160 DIAGGRGFYLKGDGVRLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEE 219
I+G R +++K ++L AL N+ +DFL ++ +T++ P+ + E M L F +
Sbjct: 177 KISGARFYFIKNRLLKLEMALENYAVDFLSQRGFTVVEPPYMLNLESMRGATDLETFKDT 236
Query: 220 LYKVTGEGDDKYLIATAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGI 279
LYK+ E +D YLIAT+E + + ++++ ELPIR AG S+CFR+EAG+HG+DT GI
Sbjct: 237 LYKI--EDEDLYLIATSEHSIASMLSNEFLEEKELPIRVAGVSACFRREAGAHGKDTKGI 294
Query: 280 FRVHQFEKVEQFCITSPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAK 339
FRVHQF K+EQF P DSWD EE++ N+EE Y+ L IPY+VV + SG L AAK
Sbjct: 295 FRVHQFNKIEQFIFCKPE--DSWDYLEEILSNAEEIYRSLGIPYRVVNVCSGELGRLAAK 352
Query: 340 KLDLEAWFPASQTYRELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATER 399
K D+EAWFPA +RE+VS SN TDYQ+R L I+Y + NE +VH LNST AT R
Sbjct: 353 KYDIEAWFPAQGKFREIVSASNDTDYQARSLNIKYRKSGGNE----FVHTLNSTAIATTR 408
Query: 400 TICCILENYQKEDGVEVPEVLQPFMG 425
+ I+EN+Q++ + +P+VL P+ G
Sbjct: 409 ILVAIMENFQEDGRIRIPDVLVPYTG 434
>sp|B8CZZ9|SYS_HALOH Serine--tRNA ligase OS=Halothermothrix orenii (strain H 168 / OCM
544 / DSM 9562) GN=serS PE=3 SV=1
Length = 422
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 255/433 (58%), Gaps = 13/433 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLD+ RE E + + +RR L DE LD+K R++ +VE + + N ++
Sbjct: 1 MLDMKFIRENL----ETVADMLKRRGTEAPL-DEFKELDEKRREIIQEVEQLKHKRNVVS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
+I +LK +G+D S+++ + E+ + E+R ++ + + N+ HDSVPV
Sbjct: 56 SKIGELKRAGEDASDIIAEMKEVSATIKKYDEELRGIEERLQQVVLSIPNMPHDSVPVGE 115
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
DE +N VR WGE R + + K H +L E L I D ++G+ ++G R +LKG G RL ++
Sbjct: 116 DEDDNVEVRRWGEPRKFDFEFKPHWDLGEALDILDFERGSKVSGARFTFLKGAGARLERS 175
Query: 180 LINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQP 239
LI+F +D + YT + PF + + QL +F +++KV EG D YLI TAE P
Sbjct: 176 LISFMIDHHTQNGYTEIFPPFMVNSDSCIGTGQLPKFAGDMFKV--EGTDYYLIPTAEVP 233
Query: 240 LCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNGN 299
+ + D+ ++ +LP+ + YS+CFR EAG+HGRDT GI R HQF KVE P+
Sbjct: 234 VTNLYRDEILNAEDLPVYHVAYSACFRAEAGAHGRDTRGIIRQHQFNKVELVKFVHPD-- 291
Query: 300 DSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVSC 359
S++ E++ +N+EE QML++PY+VV + +G L ++AK D+E W PA TYRE+ SC
Sbjct: 292 KSFEELEKLTRNAEEILQMLELPYRVVTLCTGDLTFSSAKTYDIEVWMPAYDTYREISSC 351
Query: 360 SNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVPE 418
SN D+Q+RR IR+ + +YVH LN + A RT+ I+ENYQ EDG + VPE
Sbjct: 352 SNFKDFQARRAGIRF--RPEPGAKAEYVHTLNGSGLAIGRTVAAIMENYQNEDGSITVPE 409
Query: 419 VLQPFMGGKTFLP 431
VL+P+MG P
Sbjct: 410 VLRPYMGMDVIKP 422
>sp|Q2RMH8|SYS_MOOTA Serine--tRNA ligase OS=Moorella thermoacetica (strain ATCC 39073)
GN=serS PE=3 SV=1
Length = 427
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/431 (38%), Positives = 255/431 (59%), Gaps = 14/431 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDI + R++ PE + RR + L + + LD + R L +VE + N+++
Sbjct: 1 MLDIRVVRQD----PEGVARGLARRGLAAGL-EHFLELDARRRNLLVEVEGLKNRRNQVS 55
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
++A+LK SG+D +E++ E+ ++ + + +VR ++ ++ + N+ H SVP
Sbjct: 56 AEVARLKKSGQDATELIASMREVGERIKELDEKVRAVEEELRQEMLKLPNIPHASVPDGL 115
Query: 121 DEANNAIVRTWGE-KRTEPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
+A+N VR WGE R + + + H E+ E LGI D ++G +AG R + +G G RL +A
Sbjct: 116 SDADNKPVRHWGELPRFKFEPRPHWEIAENLGIVDFERGGKVAGARFVFYRGAGARLERA 175
Query: 180 LINFGLDFLE-KKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQ 238
LINF LD K YT + P+ + M QL +F E+++ V EG D YLI TAE
Sbjct: 176 LINFMLDLHTIKHGYTEIFPPYMVNSASMLGTGQLPKFAEDMFHV--EGTDYYLIPTAEV 233
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
P+ + + + +LPI + YS+CFR EAG+ GRDT G+ R HQF KVE T P
Sbjct: 234 PVTNLYRGEILPGEKLPIYHVAYSACFRAEAGAAGRDTRGLIRQHQFNKVELVKFTRPE- 292
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVS 358
DS++ E++ +++EE Q+L +PY+VVA+ +G L +AAK DLE W P + YRE+ S
Sbjct: 293 -DSYEELEKLTRDAEEVLQLLGLPYRVVALCAGDLGFSAAKTYDLEVWMPGTACYREISS 351
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
CSN D+Q+RR +IR+ + ++ + VH LN + A RT+ ILENYQ+EDG V +P
Sbjct: 352 CSNFEDFQARRADIRF--RPGPKEKPRLVHTLNGSGVAVGRTVAAILENYQQEDGTVLIP 409
Query: 418 EVLQPFMGGKT 428
L+P+MGG T
Sbjct: 410 PALKPYMGGLT 420
>sp|Q9ZBX1|SYS_STRCO Serine--tRNA ligase OS=Streptomyces coelicolor (strain ATCC BAA-471
/ A3(2) / M145) GN=serS PE=3 SV=1
Length = 425
Score = 301 bits (771), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 259/442 (58%), Gaps = 24/442 (5%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
M+D+ L RE+ P+++R SQR R V LVD ++S D++ R + R E +
Sbjct: 1 MIDLRLLRED----PDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGLG 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
K I K +G + +E++ + ++K + E A A + L+ +GNLVH VPV
Sbjct: 57 KLIG--KAAGDEKAELLKRAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGG 114
Query: 121 DEANNAIVRTWGEKRT------EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGV 174
+E + + T G R EP+ +H+EL +LLG D+++GA ++G R ++L G G
Sbjct: 115 EE-DFVTLETHGTHRDFAAEGFEPR--DHLELGQLLGAIDVERGAKVSGSRFYFLTGVGA 171
Query: 175 RLNQALINFGLDFLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIA 234
L AL+N + +T + TP +R + MA L Q +++Y + + DD YL+
Sbjct: 172 LLELALVNAAIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHL--DKDDLYLVG 229
Query: 235 TAEQPLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCIT 294
T+E PL AYH+D+ + LP+RYAG+S CFR+EAGSHG+DT GIFRVHQF+KVE F
Sbjct: 230 TSEVPLAAYHMDEILDGDRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYV 289
Query: 295 SPNGNDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYR 354
P DS H+ +++ +++ L++P++V+ + S L +AA+K D EAW P YR
Sbjct: 290 LP--EDSQAEHQRLLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWIPTQGKYR 347
Query: 355 ELVSCSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG- 413
EL S S+CT++QSRRL IR + K + + LN TL A RTI ILEN+Q+ DG
Sbjct: 348 ELTSTSDCTEFQSRRLSIRVREGKK----VRPLATLNGTLCAVPRTIVAILENHQQADGS 403
Query: 414 VEVPEVLQPFMGGKTFLPFKAK 435
V VPEVL+P++GG+ L AK
Sbjct: 404 VRVPEVLRPYLGGREVLEPVAK 425
>sp|Q8CU95|SYS_STAES Serine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=serS PE=3 SV=1
Length = 428
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 250/431 (58%), Gaps = 13/431 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDI LFR E PEK++ R +VD+++ LD++ R+L E + + NK++
Sbjct: 1 MLDIRLFRNE----PEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVS 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
++IAQ K + +D +++ + + + D + ++ E ++ L + NL+++ VP
Sbjct: 57 EEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGA 116
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
+ N V+ WG R E + K H +LVE L +AD ++ A ++G R YL DG L +A
Sbjct: 117 SDEENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERA 176
Query: 180 LINFGLD-FLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQ 238
L+N+ L + YT + TP + + M QL +F+E+L+KV EG Y I TAE
Sbjct: 177 LMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEG--LYTIPTAEV 234
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
PL ++ D+ I P LP + ++CFR EAGS GRDT G+ R+HQF+KVE I P
Sbjct: 235 PLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPE- 293
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVS 358
DSWD EEM +N+E + L +PY+ V + +G + +A+K DLE W P+ Y+E+ S
Sbjct: 294 -DSWDALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISS 352
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
CSNCTD+Q+RR IR+ K+ + VH LN + A RT I+ENYQ EDG + +P
Sbjct: 353 CSNCTDFQARRANIRF--KRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIP 410
Query: 418 EVLQPFMGGKT 428
E L PFMGGKT
Sbjct: 411 EALVPFMGGKT 421
>sp|Q5HK07|SYS_STAEQ Serine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=serS PE=3 SV=1
Length = 428
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 250/431 (58%), Gaps = 13/431 (3%)
Query: 1 MLDINLFREEKGGIPEKIRESQRRRFASVDLVDEIISLDKKWRQLQFDVENYRKELNKIN 60
MLDI LFR E PEK++ R +VD+++ LD++ R+L E + + NK++
Sbjct: 1 MLDIRLFRNE----PEKVKSKIELRGDDPKVVDQVLELDEQRRELISKTEEMKAKRNKVS 56
Query: 61 KQIAQLKLSGKDFSEMVTKTNEIKQQSADKEVEVREAWAAVKAKLEVVGNLVHDSVPVSN 120
++IAQ K + +D +++ + + + D + ++ E ++ L + NL+++ VP
Sbjct: 57 EEIAQKKRNKEDADDVIAEMRHLGDEIKDIDNQLNEVDNKIRDILIRIPNLINEDVPQGA 116
Query: 121 DEANNAIVRTWGEKRT-EPKLKNHVELVELLGIADLKKGADIAGGRGFYLKGDGVRLNQA 179
+ N V+ WG R E + K H +LVE L +AD ++ A ++G R YL DG L +A
Sbjct: 117 SDEENVEVKKWGTPRDFEFEPKAHWDLVEELKMADFERAAKVSGARFVYLTKDGALLERA 176
Query: 180 LINFGLD-FLEKKSYTLLHTPFFMRKEVMAKCAQLAQFDEELYKVTGEGDDKYLIATAEQ 238
L+N+ L + YT + TP + + M QL +F+E+L+KV EG Y I TAE
Sbjct: 177 LMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEG--LYTIPTAEV 234
Query: 239 PLCAYHIDDWIHPSELPIRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKVEQFCITSPNG 298
PL ++ D+ I P LP + ++CFR EAGS GRDT G+ R+HQF+KVE I P
Sbjct: 235 PLTNFYRDEIIQPGVLPELFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIVQPE- 293
Query: 299 NDSWDMHEEMIKNSEEFYQMLKIPYQVVAIVSGALNDAAAKKLDLEAWFPASQTYRELVS 358
DSWD EEM +N+E + L +PY+ V + +G + +A+K DLE W P+ Y+E+ S
Sbjct: 294 -DSWDALEEMTQNAEAILEELGLPYRRVILCTGDIGFSASKTYDLEVWLPSYNDYKEISS 352
Query: 359 CSNCTDYQSRRLEIRYGQKKSNEQTKQYVHLLNSTLTATERTICCILENYQKEDG-VEVP 417
CSNCTD+Q+RR IR+ K+ + VH LN + A RT I+ENYQ EDG + +P
Sbjct: 353 CSNCTDFQARRANIRF--KRDAASKPELVHTLNGSGLAVGRTFAAIVENYQNEDGTLTIP 410
Query: 418 EVLQPFMGGKT 428
E L PFMGGKT
Sbjct: 411 EALVPFMGGKT 421
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,186,743
Number of Sequences: 539616
Number of extensions: 7240872
Number of successful extensions: 27844
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 22517
Number of HSP's gapped (non-prelim): 1202
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)