Query 043463
Match_columns 149
No_of_seqs 104 out of 346
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 08:45:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043463.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043463hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gdc_A Multicopper oxidase; be 81.0 1.6 5.4E-05 34.3 4.1 58 33-90 74-136 (288)
2 3g5w_A Multicopper oxidase typ 77.6 3.8 0.00013 32.6 5.5 58 33-90 42-107 (318)
3 1iby_A Nitrosocyanin; RED copp 70.5 6.5 0.00022 25.9 4.5 53 33-91 46-99 (112)
4 3cvb_A Plastocyanin; cupredoxi 70.4 8.6 0.00029 24.7 5.0 56 34-89 26-91 (105)
5 1v10_A Laccase; multicopper bl 69.5 7.4 0.00025 33.1 5.6 72 33-104 63-151 (521)
6 2dv6_A Nitrite reductase; elec 68.9 4.1 0.00014 33.6 3.8 67 33-102 63-132 (447)
7 2zoo_A Probable nitrite reduct 67.1 4.8 0.00016 33.2 3.8 57 33-89 68-127 (442)
8 1oe1_A Dissimilatory copper-co 66.1 4.6 0.00016 32.1 3.4 57 33-89 73-132 (336)
9 1aoz_A Ascorbate oxidase; oxid 64.5 15 0.00053 31.2 6.6 71 33-103 42-124 (552)
10 1kbv_A ANIA, major outer membr 61.6 5.4 0.00018 31.8 3.0 57 33-89 78-137 (327)
11 1hfu_A Laccase 1; oxidoreducta 61.2 10 0.00035 32.0 4.9 72 33-104 42-130 (503)
12 2zwn_A Two-domain type laccase 60.9 14 0.00048 29.4 5.4 59 33-91 43-109 (339)
13 2xu9_A Laccase; oxidoreductase 60.9 14 0.00048 30.5 5.6 56 33-89 55-115 (439)
14 2bw4_A Copper-containing nitri 60.8 7 0.00024 31.0 3.6 58 33-90 79-139 (340)
15 3abg_A Bilirubin oxidase; clea 58.6 13 0.00046 31.7 5.2 72 33-104 77-159 (534)
16 2ov0_A Amicyanin; beta-sandwic 55.4 12 0.00041 24.5 3.5 51 35-89 41-94 (105)
17 2uxt_A Protein SUFI, SUFI; oxi 53.9 15 0.00053 30.5 4.7 58 33-90 58-119 (451)
18 3aw5_A Multicopper oxidase; be 52.9 16 0.00053 30.5 4.5 56 33-88 46-105 (448)
19 1sdd_A Coagulation factor V; c 52.0 20 0.0007 28.0 4.9 46 33-78 68-127 (306)
20 2q9o_A Laccase-1; multicopper 51.4 24 0.0008 30.3 5.5 72 33-104 75-159 (559)
21 2gim_A Plastocyanin; beta shee 51.2 19 0.00066 23.1 4.0 54 35-88 28-91 (106)
22 3zx1_A Oxidoreductase, putativ 51.1 20 0.00069 30.3 5.0 57 33-89 90-151 (481)
23 3t6v_A Laccase; beta barrel, o 50.9 25 0.00087 29.7 5.6 72 33-104 43-131 (495)
24 3sqr_A Laccase; multicopper ox 50.6 28 0.00095 30.2 5.9 72 33-104 106-189 (580)
25 3tas_A Small laccase, multi-co 50.2 23 0.0008 27.8 5.0 46 33-78 50-100 (313)
26 1zpu_A Iron transport multicop 49.7 26 0.00088 29.9 5.5 71 33-103 42-125 (534)
27 1mzy_A Copper-containing nitri 47.6 15 0.00052 29.0 3.5 58 33-90 72-132 (333)
28 3pxl_A Laccase; 4-copper prote 46.5 35 0.0012 28.9 5.8 72 33-104 42-130 (499)
29 3od3_A Blue copper oxidase CUE 45.1 25 0.00084 29.9 4.6 57 33-89 56-116 (488)
30 3gyr_A PHS, phenoxazinone synt 44.9 38 0.0013 28.7 5.8 26 64-89 148-174 (612)
31 3kw8_A Laccase, putative coppe 43.9 27 0.00094 26.8 4.4 46 33-78 44-94 (276)
32 1kdj_A Plastocyanin; electron 41.7 21 0.00073 22.7 3.0 23 64-88 66-88 (102)
33 1b3i_A PETE protein, protein ( 39.1 50 0.0017 20.6 4.5 53 35-89 27-84 (97)
34 4hci_A Cupredoxin 1; structura 37.7 77 0.0026 20.1 5.3 28 63-90 61-88 (100)
35 3c75_A Amicyanin; copper prote 37.5 34 0.0012 23.4 3.7 24 64-89 98-121 (132)
36 3t9w_A Small laccase, multi-co 35.3 45 0.0015 26.0 4.4 46 33-78 66-116 (299)
37 2l16_A SEC-independent protein 35.1 20 0.00068 23.0 1.9 18 3-21 6-23 (78)
38 1cuo_A Protein (azurin ISO-2); 34.9 23 0.00077 24.5 2.3 26 64-89 86-114 (129)
39 2r7e_B Coagulation factor VIII 34.6 16 0.00054 32.9 1.8 60 32-91 206-281 (770)
40 2aan_A Auracyanin A; cupredoxi 33.9 21 0.00073 24.4 2.1 25 65-89 101-125 (139)
41 1qhq_A Protein (auracyanin); e 33.9 39 0.0013 22.9 3.5 26 64-89 99-124 (140)
42 2g23_A PHS, phenoxazinone synt 32.5 99 0.0034 26.9 6.6 43 62-104 146-196 (612)
43 1gwy_A Sticholysin II; cytolys 32.2 89 0.003 23.1 5.3 46 33-78 29-76 (175)
44 3lim_A Fragaceatoxin C; pore f 31.6 1E+02 0.0035 22.8 5.5 46 33-78 30-77 (178)
45 2j5w_A Ceruloplasmin, ferroxid 30.8 46 0.0016 30.9 4.3 59 33-91 103-185 (1065)
46 3cg8_A Laccase; oxidoreductase 28.8 55 0.0019 26.1 4.0 46 33-78 85-135 (343)
47 2cal_A Rusticyanin; iron respi 28.6 81 0.0028 22.1 4.5 25 64-89 113-139 (154)
48 2plt_A Plastocyanin; electron 28.0 1.1E+02 0.0038 18.9 5.1 53 35-89 26-85 (98)
49 1iuz_A Plastocyanin; electron 27.0 1.2E+02 0.0041 19.0 4.9 24 64-89 62-85 (98)
50 1xvs_A Protein APAG; MCSG APC2 25.6 1.4E+02 0.0047 20.6 5.1 44 33-76 30-86 (126)
51 1xq4_A Protein APAG; all beta 25.1 1.7E+02 0.0059 20.5 5.7 44 33-76 35-91 (139)
52 2iaa_C Azurin; quinoprotein, t 24.6 48 0.0016 22.8 2.5 26 64-89 85-113 (128)
53 2f1e_A Protein APAG; APAG prot 24.5 1.5E+02 0.0051 20.5 5.1 43 33-75 31-86 (127)
54 2k0m_A Uncharacterized protein 24.4 33 0.0011 23.2 1.6 12 112-123 76-87 (104)
55 1nwp_A Azurin; electron transp 23.6 46 0.0016 22.9 2.3 26 64-89 86-114 (128)
56 2dv6_A Nitrite reductase; elec 23.2 72 0.0025 25.9 3.8 57 32-89 202-262 (447)
57 3ay2_A Lipid modified azurin p 23.1 44 0.0015 24.3 2.2 26 64-89 125-152 (167)
58 1plc_A Plastocyanin; electron 22.3 1.1E+02 0.0039 19.0 4.0 24 64-89 63-86 (99)
59 1q90_L Cytochrome B6F complex 21.3 57 0.0019 17.4 1.8 12 1-13 1-12 (32)
60 1tza_A APAG protein, SOR45; st 21.2 1.6E+02 0.0054 20.6 4.8 44 33-76 30-86 (134)
61 2ccw_A Azurin II, AZN-2; elect 20.4 59 0.002 22.3 2.3 26 64-89 86-114 (129)
62 1id2_A Amicyanin; beta barrel, 20.1 42 0.0014 21.8 1.5 24 64-89 72-95 (106)
No 1
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=80.96 E-value=1.6 Score=34.30 Aligned_cols=58 Identities=22% Similarity=0.355 Sum_probs=42.5
Q ss_pred cceEEEEEeCCCCCcceEEeeeeC---C--CCCcceEecCCCEEEEEEeeCCCCcceEEEEeE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSR---D--DDFGKKVLHYNTYWEFQFRPNFWGTTRYYCWFA 90 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~---d--~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 90 (149)
..+.|+++|.|.....+..|--.. | ..+....+.||+++.+.|..+-.|+-.|.|+..
T Consensus 74 d~v~v~~~N~~~~~~~iH~HG~~~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~ 136 (288)
T 3gdc_A 74 DALRIHFTNAGAHPHTIHFHGVHRATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQS 136 (288)
T ss_dssp CEEEEEEEECSSSCBCCEESSCCCGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCS
T ss_pred CEEEEEEEeCCCCcccEEeccccccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCc
Confidence 567899999998666777776431 1 112225589999999999987677777889885
No 2
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=77.61 E-value=3.8 Score=32.65 Aligned_cols=58 Identities=16% Similarity=0.265 Sum_probs=42.5
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCC----CC----CcceEecCCCEEEEEEeeCCCCcceEEEEeE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRD----DD----FGKKVLHYNTYWEFQFRPNFWGTTRYYCWFA 90 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d----~D----lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 90 (149)
..+.|+++|.|.....|..|--... .| +....+.||+++.+.|..+-.|+--|.|+..
T Consensus 42 d~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~ 107 (318)
T 3g5w_A 42 DDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVN 107 (318)
T ss_dssp CEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSS
T ss_pred CEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCC
Confidence 5688999999976667777765321 11 1134589999999999987677777789874
No 3
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=70.52 E-value=6.5 Score=25.95 Aligned_cols=53 Identities=17% Similarity=0.281 Sum_probs=33.0
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCCCCCcce-EecCCCEEEEEEeeCCCCcceEEEEeEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRDDDFGKK-VLHYNTYWEFQFRPNFWGTTRYYCWFAW 91 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d~DlG~~-~L~~g~~~~f~F~~~~~~~T~f~C~f~w 91 (149)
..+++.++|.......+.+. ++|.. .+.||+.+.+.|..+-.|+=.|.|..--
T Consensus 46 ~~V~~~~~n~d~~~H~~~i~------~~~~~~~i~pG~~~~~~f~~~~~G~y~~~C~~~~ 99 (112)
T 1iby_A 46 DAVKVVVENKSPISEGFSID------AFGVQEVIKAGETKTISFTADKAGAFTIWCQLHP 99 (112)
T ss_dssp CEEEEEEEECSSSCEEEEEG------GGTEEEEECTTCEEEEEEECCSCEEEEEBCSSSC
T ss_pred CEEEEEEEECCCCeEEEEEc------CCCceeEeCCCCEEEEEEECCCCEEEEEECCCCC
Confidence 34556667865322222221 22333 4899999999998766677788898744
No 4
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=70.44 E-value=8.6 Score=24.71 Aligned_cols=56 Identities=20% Similarity=0.275 Sum_probs=34.6
Q ss_pred ceEEEEEeCCCCCcceEEeeeeCCCC-------C--cceEecCCCEEEEEEee-CCCCcceEEEEe
Q 043463 34 VRHIRITNKIDPGVDLTFECKSRDDD-------F--GKKVLHYNTYWEFQFRP-NFWGTTRYYCWF 89 (149)
Q Consensus 34 ~~~V~I~N~L~~~~~L~vhCkS~d~D-------l--G~~~L~~g~~~~f~F~~-~~~~~T~f~C~f 89 (149)
.-+|+++|.......+.+|=-..... + ....+.||+++.+.|.. +-.|+=.|.|+.
T Consensus 26 Gd~V~~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~~ 91 (105)
T 3cvb_A 26 GDTVKWVNNKLPPHNILFDDKQVPGASKELADKLSHSQLMFSPGESYEITFSSDFPAGTYTYYCAP 91 (105)
T ss_dssp TEEEEEEECSSCCEEEEECTTSSGGGCHHHHHHHCEEEEECSTTCEEEEEECTTSCSEEEEEECTT
T ss_pred CCEEEEEECCCCCCeEEEeCCCCCcccccccccccccccccCCCCeEEEEEecCCCCeeEEEEeCC
Confidence 34678889865445566552211000 0 12358999999999964 345777888983
No 5
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=69.52 E-value=7.4 Score=33.09 Aligned_cols=72 Identities=18% Similarity=0.264 Sum_probs=45.2
Q ss_pred cceEEEEEeCCC-----CCcceEEeeeeC----CCC-C-c--ceEecCCCEEEEEEe-eCCCCcceEEEEeEeC--Ccee
Q 043463 33 DVRHIRITNKID-----PGVDLTFECKSR----DDD-F-G--KKVLHYNTYWEFQFR-PNFWGTTRYYCWFAWR--NEFK 96 (149)
Q Consensus 33 ~~~~V~I~N~L~-----~~~~L~vhCkS~----d~D-l-G--~~~L~~g~~~~f~F~-~~~~~~T~f~C~f~w~--~~~~ 96 (149)
..+.|+++|+|. ....+..|--.- ..| . | ..-++||++|.+.|. .+-.|+--|.|+.... .+..
T Consensus 63 d~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~ 142 (521)
T 1v10_A 63 DRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLR 142 (521)
T ss_dssp CEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCE
T ss_pred CEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCce
Confidence 456788999998 455666665532 112 1 2 134899999999999 4556766677887432 1222
Q ss_pred -EEEEEeec
Q 043463 97 -WFDIYDHN 104 (149)
Q Consensus 97 -~fd~y~~~ 104 (149)
-+.|..+.
T Consensus 143 G~liV~~~~ 151 (521)
T 1v10_A 143 GAFVVYDPN 151 (521)
T ss_dssp EEEEEECTT
T ss_pred EEEEEcCCc
Confidence 57776543
No 6
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=68.90 E-value=4.1 Score=33.56 Aligned_cols=67 Identities=16% Similarity=0.194 Sum_probs=42.4
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCCCCCcceEecCCCEEEEEEeeCCCCcceEEEEeEeC--Ccee-EEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRDDDFGKKVLHYNTYWEFQFRPNFWGTTRYYCWFAWR--NEFK-WFDIYD 102 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w~--~~~~-~fd~y~ 102 (149)
..+.|+++|.+.....|.+|-. .......+.||+++.+.|...-.|+..|.|++... .+.. .+.|..
T Consensus 63 d~v~~~~~N~~~~~h~~~~~g~---~~~~~~~i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~ 132 (447)
T 2dv6_A 63 ETVQVNLVNGEGAQHDVVVDQY---AARSAIVNGKNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQVLP 132 (447)
T ss_dssp CEEEEEEECSSSSCBCCEETTT---TEECCCBCSTTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEEES
T ss_pred CEEEEEEEcCCCCceEEEEccC---CcccceecCCCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEEeC
Confidence 4567889999865445555421 11123347999999999976556888889997321 1233 566654
No 7
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=67.15 E-value=4.8 Score=33.18 Aligned_cols=57 Identities=12% Similarity=0.104 Sum_probs=38.6
Q ss_pred cceEEEEEeCCCC--CcceEEeeeeCCCC-CcceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 33 DVRHIRITNKIDP--GVDLTFECKSRDDD-FGKKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 33 ~~~~V~I~N~L~~--~~~L~vhCkS~d~D-lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
..+.|+++|.|.. ...+..|--...+. .+...+.||+.+.+.|..+-.|+-.|.|+.
T Consensus 68 d~v~v~~~N~l~~~~~~~iH~HG~~~~dG~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~ 127 (442)
T 2zoo_A 68 DEIEFNLSNHPSSKMPHNIDLHAVTGPGGGAESSFTAPGHTSTFNFKALNPGLYIYHCAT 127 (442)
T ss_dssp CEEEEEEEECTTCSSCBCCEETTCCSGGGGGGGCCBCTTCEEEEEEECCSCEEEEEECCC
T ss_pred CEEEEEEEECCCCCCCCCEEecCCcCCCCCCccEEECCCCEEEEEEEcCCCeEEEEecCC
Confidence 4678889999863 35566665432221 111248999999999987667777788953
No 8
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=66.10 E-value=4.6 Score=32.09 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=39.1
Q ss_pred cceEEEEEeCCCCC--cceEEeeeeCCCC-CcceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 33 DVRHIRITNKIDPG--VDLTFECKSRDDD-FGKKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 33 ~~~~V~I~N~L~~~--~~L~vhCkS~d~D-lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
..+.|+++|.+... ..+.+|-....+| -+...+.||++|.+.|..+-.|+--|.|+.
T Consensus 73 d~v~v~~~N~~~~~~~h~~~~h~~~~~~~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~ 132 (336)
T 1oe1_A 73 DYVQLTLVNPATNAMPHNVDFHGATGALGGAKLTNVNPGEQATLRFKADRSGTFVYHCAP 132 (336)
T ss_dssp CEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCC
T ss_pred CEEEEEEEcCCCCCccccceECCCCCCCCCcceEEeCCCCEEEEEEECCCCeEEEEecCC
Confidence 56788899997531 4567775332222 233348999999999987656767778986
No 9
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=64.53 E-value=15 Score=31.25 Aligned_cols=71 Identities=15% Similarity=0.166 Sum_probs=46.1
Q ss_pred cceEEEEEeCCC-CCcceEEeeeeC------CCCCc--ceEecCCCEEEEEEeeCCCCcceEEEEeEeCC--cee-EEEE
Q 043463 33 DVRHIRITNKID-PGVDLTFECKSR------DDDFG--KKVLHYNTYWEFQFRPNFWGTTRYYCWFAWRN--EFK-WFDI 100 (149)
Q Consensus 33 ~~~~V~I~N~L~-~~~~L~vhCkS~------d~DlG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w~~--~~~-~fd~ 100 (149)
..+.|+++|+|. ....|..|--.. |.--| ..-++||++|.+.|..+-.|+--|.|+....- +.. .+.|
T Consensus 42 D~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV 121 (552)
T 1aoz_A 42 DSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIV 121 (552)
T ss_dssp CEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEE
T ss_pred CEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEE
Confidence 577899999997 555666665431 11112 23489999999999986667667778874321 122 4667
Q ss_pred Eee
Q 043463 101 YDH 103 (149)
Q Consensus 101 y~~ 103 (149)
...
T Consensus 122 ~~~ 124 (552)
T 1aoz_A 122 DPP 124 (552)
T ss_dssp ECC
T ss_pred eCC
Confidence 654
No 10
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=61.56 E-value=5.4 Score=31.76 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=36.9
Q ss_pred cceEEEEEeCCCC--CcceEEeeeeCCCC-CcceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 33 DVRHIRITNKIDP--GVDLTFECKSRDDD-FGKKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 33 ~~~~V~I~N~L~~--~~~L~vhCkS~d~D-lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
..+.|+++|.+.. ...+..|--...|. .....+.||++|.+.|..+-.|+--|.|+.
T Consensus 78 d~v~v~~~N~~~~~~~~~ih~HG~~~~dG~~~~~~i~PG~~~~y~f~~~~~Gt~wyH~h~ 137 (327)
T 1kbv_A 78 DTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTSTFSFKALQPGLYIYHCAV 137 (327)
T ss_dssp CEEEEEEEECTTCSSCBCCEETTCCSGGGGTTTTCBCTTEEEEEEEECCSCEEEEEECCC
T ss_pred CEEEEEEEECCCCCCceeeEeCccccCCCCCcceeecCCCEEEEEEECCCCeEEEEEeCC
Confidence 5678889999863 24566664322111 111248999999999987656665677875
No 11
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=61.15 E-value=10 Score=32.00 Aligned_cols=72 Identities=19% Similarity=0.289 Sum_probs=46.1
Q ss_pred cceEEEEEeCCC-----CCcceEEeeeeC----CCC-C-c--ceEecCCCEEEEEEe-eCCCCcceEEEEeEeC--Ccee
Q 043463 33 DVRHIRITNKID-----PGVDLTFECKSR----DDD-F-G--KKVLHYNTYWEFQFR-PNFWGTTRYYCWFAWR--NEFK 96 (149)
Q Consensus 33 ~~~~V~I~N~L~-----~~~~L~vhCkS~----d~D-l-G--~~~L~~g~~~~f~F~-~~~~~~T~f~C~f~w~--~~~~ 96 (149)
..+.|+++|+|. ....+..|--.- ..| . | ..-++||++|.+.|. .+-.||--|.|+.... .+..
T Consensus 42 d~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~ 121 (503)
T 1hfu_A 42 DNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLR 121 (503)
T ss_dssp CCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCE
T ss_pred CEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccccCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcce
Confidence 578899999998 445666665532 122 1 1 124899999999999 4556766677887432 1222
Q ss_pred -EEEEEeec
Q 043463 97 -WFDIYDHN 104 (149)
Q Consensus 97 -~fd~y~~~ 104 (149)
.+.|..+.
T Consensus 122 G~liV~~~~ 130 (503)
T 1hfu_A 122 GPMVIYDDN 130 (503)
T ss_dssp EEEEEECTT
T ss_pred eeEEEcCCC
Confidence 57776543
No 12
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=60.91 E-value=14 Score=29.44 Aligned_cols=59 Identities=15% Similarity=0.264 Sum_probs=39.9
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCCC----CC----cceEecCCCEEEEEEeeCCCCcceEEEEeEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRDD----DF----GKKVLHYNTYWEFQFRPNFWGTTRYYCWFAW 91 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d~----Dl----G~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w 91 (149)
.++.|+++|.+.....|..|--.-.. |= ....+.||+.|.+.|..+-.|+--|.|+...
T Consensus 43 d~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~ 109 (339)
T 2zwn_A 43 DDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNV 109 (339)
T ss_dssp CEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSH
T ss_pred CEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCc
Confidence 57889999999765566666543111 21 1235899999999999775565566687644
No 13
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=60.87 E-value=14 Score=30.49 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=38.1
Q ss_pred cceEEEEEeCCCCCcceEEeeee--C-CCCCcceEecCCCEEEEEEee--CCCCcceEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKS--R-DDDFGKKVLHYNTYWEFQFRP--NFWGTTRYYCWF 89 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS--~-d~DlG~~~L~~g~~~~f~F~~--~~~~~T~f~C~f 89 (149)
..+.|+++|+|.....|..|--. . .|.. ...+.||++|.+.|.. +-.|+--|.|+.
T Consensus 55 d~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~-~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~ 115 (439)
T 2xu9_A 55 DTVRLTLENRLPEPTNLHWHGLPISPKVDDP-FLEIPPGESWTYEFTVPKELAGTFWYHPHL 115 (439)
T ss_dssp CEEEEEEEECSSSCBCCEEETCCCCTTTSCT-TCCBCTTCEEEEEEECCSSCCEEEEEECCC
T ss_pred CEEEEEEEECCCCCcceEeCCCCCCccccCC-cccCCCCCeEEEEEecCCCCCcceEeccCC
Confidence 57789999999866566666543 1 1222 2348999999999984 335655666775
No 14
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=60.76 E-value=7 Score=31.03 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=38.4
Q ss_pred cceEEEEEeCCCCC--cceEEeeeeCC-CCCcceEecCCCEEEEEEeeCCCCcceEEEEeE
Q 043463 33 DVRHIRITNKIDPG--VDLTFECKSRD-DDFGKKVLHYNTYWEFQFRPNFWGTTRYYCWFA 90 (149)
Q Consensus 33 ~~~~V~I~N~L~~~--~~L~vhCkS~d-~DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 90 (149)
..+.|+++|.+... ..|.+|-.... +.-+...+.||++|.+.|..+-.|+--|.|+..
T Consensus 79 d~v~v~~~N~~~~~~~hg~~~~~~~~~~~~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~ 139 (340)
T 2bw4_A 79 DYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPE 139 (340)
T ss_dssp CEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCT
T ss_pred CEEEEEEEeCCCCCccCcceeCCcCCCCCCccceEeCCCCEEEEEEECCCCeEEEEEcCCC
Confidence 57789999998421 34666643221 222334589999999999976566667778863
No 15
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=58.64 E-value=13 Score=31.73 Aligned_cols=72 Identities=8% Similarity=0.077 Sum_probs=45.6
Q ss_pred cceEEEEEeCCCCCcceEEeeeeC--C-CCCcceEecCCCEEEEEEeeCC-CCcceEEEEeEeC------Ccee-EEEEE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSR--D-DDFGKKVLHYNTYWEFQFRPNF-WGTTRYYCWFAWR------NEFK-WFDIY 101 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~--d-~DlG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f~w~------~~~~-~fd~y 101 (149)
..+.|+++|+|.....+..|--.. . |..-...+.||++|.+.|...- -||--|.|+.... .+.. -+.|.
T Consensus 77 d~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~ 156 (534)
T 3abg_A 77 VETVVRFINNAEAPNSVHLHGSFSRAAFDGWAEDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLT 156 (534)
T ss_dssp CCEEEEEEECSSSCBCEEEETCCCCTTTTTCSSSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEE
T ss_pred cEEEEEEEECCCCCceEEECCCcCCCCCCCCCCCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEE
Confidence 567899999998666666665531 1 2222234899999999998654 3455556877432 2223 46676
Q ss_pred eec
Q 043463 102 DHN 104 (149)
Q Consensus 102 ~~~ 104 (149)
...
T Consensus 157 ~~~ 159 (534)
T 3abg_A 157 DPA 159 (534)
T ss_dssp CTT
T ss_pred CCc
Confidence 644
No 16
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=55.45 E-value=12 Score=24.49 Aligned_cols=51 Identities=14% Similarity=0.165 Sum_probs=31.5
Q ss_pred eEEEEEeCCCCCcceEEeeeeCCC---CCcceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 35 RHIRITNKIDPGVDLTFECKSRDD---DFGKKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 35 ~~V~I~N~L~~~~~L~vhCkS~d~---DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
-+|+++|.......+..+= ..+ .+....|.||+.+.+.|.. .|+=.|.|.+
T Consensus 41 d~V~~~N~d~~~H~v~~~~--~~~g~~~~~~~~~~pG~~~~~tf~~--~G~y~y~C~~ 94 (105)
T 2ov0_A 41 DTVTWINREAMPHNVHFVA--GVLGEAALKGPMMKKEQAYSLTFTE--AGTYDYHCTP 94 (105)
T ss_dssp CEEEEEECSSSCBCCEECT--TTSSSSCEECCCBCTTEEEEEEECS--CEEEEEECSS
T ss_pred CEEEEEECCCCCEEEEEcC--CCCCcccccccccCCCCEEEEEeCC--CEEEEEEeCC
Confidence 3688888865334444431 110 0222238899999999943 4777889987
No 17
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=53.89 E-value=15 Score=30.48 Aligned_cols=58 Identities=14% Similarity=0.066 Sum_probs=40.3
Q ss_pred cceEEEEEeCCCCCcceEEeeeeC--C-CCCcceEecCCCEEEEEEeeCC-CCcceEEEEeE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSR--D-DDFGKKVLHYNTYWEFQFRPNF-WGTTRYYCWFA 90 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~--d-~DlG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f~ 90 (149)
..+.|+++|+|.....+..|--.- + |..-...++||++|.+.|..+- .|+--|.|+..
T Consensus 58 d~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~ 119 (451)
T 2uxt_A 58 DDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTP 119 (451)
T ss_dssp CEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGGCBCTTCEECCEEECCSCSEEEEEEECCT
T ss_pred CEEEEEEEECCCCCccEEECCccCCCCCCCCCcCcCCCCCeEEEEEEcCCCCcceEEecCCC
Confidence 577899999998666666665431 1 2222345899999999999764 56556668873
No 18
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=52.90 E-value=16 Score=30.48 Aligned_cols=56 Identities=13% Similarity=0.107 Sum_probs=38.6
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCC---CCCcceEecCCCEEEEEEeeC-CCCcceEEEE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRD---DDFGKKVLHYNTYWEFQFRPN-FWGTTRYYCW 88 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d---~DlG~~~L~~g~~~~f~F~~~-~~~~T~f~C~ 88 (149)
..+.|+++|+|.....+..|--.-. |-.-...+.||++|.+.|... -.|+--|.|+
T Consensus 46 d~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H 105 (448)
T 3aw5_A 46 QRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFAITPGESYNYSFDVVNRAGTYLYHPH 105 (448)
T ss_dssp CEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGCBCTTCEEEEEEECCSCSEEEEEEEC
T ss_pred CEEEEEEEECCCCceeEEeCCccCCCccCCCCCccCCCCCEEEEEEEcCCCCCceEeccC
Confidence 5788999999986666666654311 111125689999999999976 4565556677
No 19
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=52.01 E-value=20 Score=28.02 Aligned_cols=46 Identities=7% Similarity=0.113 Sum_probs=32.1
Q ss_pred cceEEEEEeCCCCCcceEEeeee--CCCCC--c----------ceEecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPGVDLTFECKS--RDDDF--G----------KKVLHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS--~d~Dl--G----------~~~L~~g~~~~f~F~~~ 78 (149)
..+.|+++|.|.....|..|--. +..|= + ...+.||+.|.+.|..+
T Consensus 68 d~v~v~~~N~l~~~~siH~HGl~~~~~~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~~ 127 (306)
T 1sdd_A 68 DIMKVHFKNKAHKPLSIHAQGIKYSKFSEGASYSDHTLPMEKMDDAVAPGQEYTYEWIIS 127 (306)
T ss_dssp CEEEEEEEECSSSCBCCEEESSCCCTTTSCCCSCCCCCHHHHTTTCBCTTCEEEEEEECC
T ss_pred CEEEEEEEECCCCcccEeecceecccccCCCccCCCCcccccCCCccCCCCeEEEEEEeC
Confidence 57789999999766667777654 11221 1 13589999999999864
No 20
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=51.36 E-value=24 Score=30.26 Aligned_cols=72 Identities=17% Similarity=0.283 Sum_probs=45.6
Q ss_pred cceEEEEEeCCC-CCcceEEeeeeC------CCCCc--ceEecC-CCEEEEEEeeCCCCcceEEEEeEeC--Ccee-EEE
Q 043463 33 DVRHIRITNKID-PGVDLTFECKSR------DDDFG--KKVLHY-NTYWEFQFRPNFWGTTRYYCWFAWR--NEFK-WFD 99 (149)
Q Consensus 33 ~~~~V~I~N~L~-~~~~L~vhCkS~------d~DlG--~~~L~~-g~~~~f~F~~~~~~~T~f~C~f~w~--~~~~-~fd 99 (149)
..+.|+++|+|. ....|..|--.- |.--| ..-++| |++|.+.|...-.|+--|.|+.... .+.. .+.
T Consensus 75 D~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~li 154 (559)
T 2q9o_A 75 DTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQ 154 (559)
T ss_dssp CEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEE
T ss_pred CEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEE
Confidence 577899999995 345677776532 11111 234899 9999999997766766666887432 1122 466
Q ss_pred EEeec
Q 043463 100 IYDHN 104 (149)
Q Consensus 100 ~y~~~ 104 (149)
|..+.
T Consensus 155 V~~~~ 159 (559)
T 2q9o_A 155 INGPA 159 (559)
T ss_dssp EECCC
T ss_pred ecCCC
Confidence 65543
No 21
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=51.15 E-value=19 Score=23.08 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=32.6
Q ss_pred eEEEEEeCCCCCcceEEeeeeCCCCCc---------ceEecCCCEEEEEEee-CCCCcceEEEE
Q 043463 35 RHIRITNKIDPGVDLTFECKSRDDDFG---------KKVLHYNTYWEFQFRP-NFWGTTRYYCW 88 (149)
Q Consensus 35 ~~V~I~N~L~~~~~L~vhCkS~d~DlG---------~~~L~~g~~~~f~F~~-~~~~~T~f~C~ 88 (149)
-+|++.|.-.....+.++=.....+-| ...+.||+.+.+.|.. +-.|+-.|+|.
T Consensus 28 d~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~ 91 (106)
T 2gim_A 28 DTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE 91 (106)
T ss_dssp CEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT
T ss_pred CEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC
Confidence 367888875323456555211111012 2348999999999954 44677789998
No 22
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=51.07 E-value=20 Score=30.28 Aligned_cols=57 Identities=18% Similarity=0.137 Sum_probs=38.3
Q ss_pred cceEEEEEeCCCCCcceEEeeee--CC-CCCcceEecCCCEEEEEEeeCC--CCcceEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKS--RD-DDFGKKVLHYNTYWEFQFRPNF--WGTTRYYCWF 89 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS--~d-~DlG~~~L~~g~~~~f~F~~~~--~~~T~f~C~f 89 (149)
..+.|+++|+|.....|..|=-. .. |-.-...+.||++|.+.|...- -||--|.|+.
T Consensus 90 d~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~ 151 (481)
T 3zx1_A 90 DKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHP 151 (481)
T ss_dssp CEEEEEEEECSSSCBCCEEETCCCCGGGSCCTTSCBCTTCEEEEEEECCTTCCEEEEEECCC
T ss_pred cEEEEEEEeCCCCCeeEEecCcccCCccCCCccCcCCCCCeEEEEEeCCCCCCceEEEeecC
Confidence 56789999999866566666543 11 2222345899999999999753 3544555775
No 23
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=50.85 E-value=25 Score=29.69 Aligned_cols=72 Identities=17% Similarity=0.222 Sum_probs=45.4
Q ss_pred cceEEEEEeCCCC-----CcceEEeeeeC-----CCCC-c--ceEecCCCEEEEEEee-CCCCcceEEEEeEeC--Ccee
Q 043463 33 DVRHIRITNKIDP-----GVDLTFECKSR-----DDDF-G--KKVLHYNTYWEFQFRP-NFWGTTRYYCWFAWR--NEFK 96 (149)
Q Consensus 33 ~~~~V~I~N~L~~-----~~~L~vhCkS~-----d~Dl-G--~~~L~~g~~~~f~F~~-~~~~~T~f~C~f~w~--~~~~ 96 (149)
..+.|+++|+|.. +..+..|--.. .|.. | .--++||++|.+.|.. +-.||--|.|+.... .+..
T Consensus 43 D~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~ 122 (495)
T 3t6v_A 43 DNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFITQCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLR 122 (495)
T ss_dssp CEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCE
T ss_pred cEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCce
Confidence 5678999999974 34566665421 1211 1 1348999999999997 556766667887432 1222
Q ss_pred -EEEEEeec
Q 043463 97 -WFDIYDHN 104 (149)
Q Consensus 97 -~fd~y~~~ 104 (149)
.+.|..+.
T Consensus 123 G~lIV~~~~ 131 (495)
T 3t6v_A 123 GPFVVYDPN 131 (495)
T ss_dssp EEEEEECTT
T ss_pred EEEEEcCcc
Confidence 57776543
No 24
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=50.61 E-value=28 Score=30.23 Aligned_cols=72 Identities=21% Similarity=0.297 Sum_probs=45.0
Q ss_pred cceEEEEEeCCC-CCcceEEeeeeC------CCCCc--ceEecCCCEEEEEEeeCCCCcceEEEEeEeCC--c-eeEEEE
Q 043463 33 DVRHIRITNKID-PGVDLTFECKSR------DDDFG--KKVLHYNTYWEFQFRPNFWGTTRYYCWFAWRN--E-FKWFDI 100 (149)
Q Consensus 33 ~~~~V~I~N~L~-~~~~L~vhCkS~------d~DlG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f~w~~--~-~~~fd~ 100 (149)
..+.|+++|+|. .+..+..|--.. |.--| .--++||++|.+.|...-.||--|.|+....- + .-.+.|
T Consensus 106 D~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vTq~pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV 185 (580)
T 3sqr_A 106 DNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVTQCPIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLII 185 (580)
T ss_dssp CEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEE
T ss_pred CEEEEEEEECCCCCcceEEecccccCCCccccCCCccccCCCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEe
Confidence 567899999997 344555554321 11111 23489999999999987667666678874321 1 225667
Q ss_pred Eeec
Q 043463 101 YDHN 104 (149)
Q Consensus 101 y~~~ 104 (149)
..+.
T Consensus 186 ~~p~ 189 (580)
T 3sqr_A 186 NGPA 189 (580)
T ss_dssp ECCC
T ss_pred eCcc
Confidence 6543
No 25
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=50.22 E-value=23 Score=27.80 Aligned_cols=46 Identities=20% Similarity=0.257 Sum_probs=29.6
Q ss_pred cceEEEEEeCCCCCcceEEeee-----eCCCCCcceEecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPGVDLTFECK-----SRDDDFGKKVLHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCk-----S~d~DlG~~~L~~g~~~~f~F~~~ 78 (149)
..+.|+++|+|.....|..|=- +..-......+.||++|.+.|...
T Consensus 50 d~v~v~~~N~l~~~~siH~HG~~~~~~~dG~~~~~~~i~PG~~~~Y~~~~~ 100 (313)
T 3tas_A 50 DTLHIEFENTMDVPVSLHVHGLDYEISSDGTKQSRSDVEPGGTRTYTWRTH 100 (313)
T ss_dssp CEEEEEEEECSSSCBCCEESSSBCCGGGSCSTTTTCCBCTTCEEEEEEBCC
T ss_pred CEEEEEEEECCCCCccEeecCCcCCccCCCCccccCCcCCCCEEEEEEEec
Confidence 5788999999975544444432 211112223489999999999754
No 26
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=49.69 E-value=26 Score=29.86 Aligned_cols=71 Identities=20% Similarity=0.171 Sum_probs=45.3
Q ss_pred cceEEEEEeCCC-CCcceEEeeeeC----CCC--Cc--ceEecCCCEEEEEEeeC-CCCcceEEEEeEeC--Ccee-EEE
Q 043463 33 DVRHIRITNKID-PGVDLTFECKSR----DDD--FG--KKVLHYNTYWEFQFRPN-FWGTTRYYCWFAWR--NEFK-WFD 99 (149)
Q Consensus 33 ~~~~V~I~N~L~-~~~~L~vhCkS~----d~D--lG--~~~L~~g~~~~f~F~~~-~~~~T~f~C~f~w~--~~~~-~fd 99 (149)
..+.|+++|+|. ....|..|--.. ..| -| ..-+.||++|.+.|... --||--|.|+.... .+.. -+.
T Consensus 42 d~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~li 121 (534)
T 1zpu_A 42 DRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFI 121 (534)
T ss_dssp CEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEE
T ss_pred CEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEE
Confidence 577899999998 556677776541 111 11 23489999999999976 56666666876421 1122 466
Q ss_pred EEee
Q 043463 100 IYDH 103 (149)
Q Consensus 100 ~y~~ 103 (149)
|...
T Consensus 122 V~~~ 125 (534)
T 1zpu_A 122 IKDD 125 (534)
T ss_dssp EECT
T ss_pred eCCC
Confidence 6554
No 27
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=47.58 E-value=15 Score=29.00 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=37.8
Q ss_pred cceEEEEEeCCCCC--cceEEeeeeCCC-CCcceEecCCCEEEEEEeeCCCCcceEEEEeE
Q 043463 33 DVRHIRITNKIDPG--VDLTFECKSRDD-DFGKKVLHYNTYWEFQFRPNFWGTTRYYCWFA 90 (149)
Q Consensus 33 ~~~~V~I~N~L~~~--~~L~vhCkS~d~-DlG~~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 90 (149)
..+.|+++|....- ..|.+|-....+ .-+...+.||+++.+.|..+-.|+--|.|+..
T Consensus 72 d~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~ 132 (333)
T 1mzy_A 72 DYVELTLINPPENTMPHNIDFHAATGALGGGGLTLINPGEKVVLRFKATRAGAFVYHCAPG 132 (333)
T ss_dssp CEEEEEEEECTTCCSCBCCEETTSCSGGGGGGGCCBCTTEEEEEEEECCSCEEEEEECCCS
T ss_pred CEEEEEEEECCCCcccccceecCCCCCCCCCceeEeCCCCEEEEEEECCCCEEEEEeecCC
Confidence 46788889984311 345666422111 12344599999999999876667777889874
No 28
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=46.49 E-value=35 Score=28.85 Aligned_cols=72 Identities=14% Similarity=0.217 Sum_probs=45.1
Q ss_pred cceEEEEEeCCCC-----CcceEEeeeeC-----CCCC-c--ceEecCCCEEEEEEee-CCCCcceEEEEeEeC--Ccee
Q 043463 33 DVRHIRITNKIDP-----GVDLTFECKSR-----DDDF-G--KKVLHYNTYWEFQFRP-NFWGTTRYYCWFAWR--NEFK 96 (149)
Q Consensus 33 ~~~~V~I~N~L~~-----~~~L~vhCkS~-----d~Dl-G--~~~L~~g~~~~f~F~~-~~~~~T~f~C~f~w~--~~~~ 96 (149)
..+.|+++|+|.. +..+..|=-.. .|.. | .--++||++|.+.|.. +-.||--|.|+.... .+..
T Consensus 42 D~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~ 121 (499)
T 3pxl_A 42 DRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFINQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLR 121 (499)
T ss_dssp CEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCE
T ss_pred CEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccce
Confidence 5778999999974 34555555421 1211 1 2348999999999987 456766667887432 1222
Q ss_pred -EEEEEeec
Q 043463 97 -WFDIYDHN 104 (149)
Q Consensus 97 -~fd~y~~~ 104 (149)
-+.|..+.
T Consensus 122 G~lIV~~~~ 130 (499)
T 3pxl_A 122 GPFVVYDPN 130 (499)
T ss_dssp EEEEEECTT
T ss_pred eEEEEcCCc
Confidence 57776543
No 29
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=45.06 E-value=25 Score=29.86 Aligned_cols=57 Identities=9% Similarity=0.008 Sum_probs=38.1
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCC---CCCcceEecCCCEEEEEEeeCC-CCcceEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRD---DDFGKKVLHYNTYWEFQFRPNF-WGTTRYYCWF 89 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d---~DlG~~~L~~g~~~~f~F~~~~-~~~T~f~C~f 89 (149)
..+.|+++|+|.....+..|=-.-. |-.-...+.||++|.+.|..+- -||--|.|+.
T Consensus 56 d~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~p~~~i~PG~~~~Y~f~~~~~aGT~wYH~H~ 116 (488)
T 3od3_A 56 KAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQ 116 (488)
T ss_dssp CEEEEEEEECSSSCBCCEEETCCCCHHHHCCTTCCBCTTCEEEEEEECCSCSEEEEEECCC
T ss_pred eEEEEEEEeCCcCceeEeecccccCcccCCCCcCcCcCCCeEEEEEecCCCceeEEEEecC
Confidence 5678999999986655666554311 1122345899999999999764 3544555775
No 30
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=44.94 E-value=38 Score=28.72 Aligned_cols=26 Identities=8% Similarity=0.091 Sum_probs=18.1
Q ss_pred EecCCCEEEEEEeeCCCCcceEE-EEe
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYY-CWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~-C~f 89 (149)
.+.||++|.+.|..+-...|.|+ .+.
T Consensus 148 ~I~PG~~~~Y~f~~~q~~GT~WYHsH~ 174 (612)
T 3gyr_A 148 AVGFGDAQLSEYPNDHQATQWWYHDHA 174 (612)
T ss_dssp CBCTTCEEEEEECCCSCSEEEEEEECC
T ss_pred ccCCCCCEEEEEEcCCCCceEEEeeCC
Confidence 48999999999986544445543 553
No 31
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=43.86 E-value=27 Score=26.83 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=32.3
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCC--CC---CcceEecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRD--DD---FGKKVLHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d--~D---lG~~~L~~g~~~~f~F~~~ 78 (149)
..+.|+++|+|.....+..|--.-. .| +....+.||++|.+.|...
T Consensus 44 d~v~v~~~N~~~~~~siH~HG~~~~~~~DG~~~t~~~i~pG~~~~Y~f~~~ 94 (276)
T 3kw8_A 44 DTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMNKSDVEPGGTRTYTWRTH 94 (276)
T ss_dssp CEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTTTCSBCTTCEEEEEEECC
T ss_pred CEEEEEEEECCCCCccEeecCcccCCccCCCcCCcCCCCCCCEEEEEEEcC
Confidence 5678999999976666777765421 11 1123589999999999875
No 32
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=41.71 E-value=21 Score=22.73 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=18.8
Q ss_pred EecCCCEEEEEEeeCCCCcceEEEE
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYYCW 88 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~C~ 88 (149)
.+.||+++++.|. -.|+=.|+|.
T Consensus 66 ~~~pG~~~~~tf~--~~G~y~y~C~ 88 (102)
T 1kdj_A 66 LSEDEPSFKAKVS--TPGTYTFYCT 88 (102)
T ss_dssp BBTTBCEEEECCC--SCEEEEEECS
T ss_pred ecCCCCEEEEEeC--CCeEEEEEeC
Confidence 4799999999883 3577789998
No 33
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=39.09 E-value=50 Score=20.65 Aligned_cols=53 Identities=11% Similarity=0.186 Sum_probs=31.2
Q ss_pred eEEEEEeCCCCCcceEEeeeeCCCC-----CcceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 35 RHIRITNKIDPGVDLTFECKSRDDD-----FGKKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 35 ~~V~I~N~L~~~~~L~vhCkS~d~D-----lG~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
-+|++.|.=.....+.++=.....+ .....+.||+.+.+.|. -.|+-.|+|..
T Consensus 27 ~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~tf~--~~G~y~y~C~~ 84 (97)
T 1b3i_A 27 DTVEFVMNKVGPHNVIFDKVPAGESAPALSNTKLAIAPGSFYSVTLG--TPGTYSFYCTP 84 (97)
T ss_dssp CEEEEEECSSCCCCBEEEECCTTSCHHHHCBCCCCCSCSCCEEEECC--SCSEEEEECSS
T ss_pred CEEEEEECCCCCeEEEEeCCCCccccccccccceecCCCCEEEEEeC--CCeEEEEEccC
Confidence 3678888532234555542211000 11234789999999993 35777999983
No 34
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=37.70 E-value=77 Score=20.06 Aligned_cols=28 Identities=18% Similarity=0.289 Sum_probs=22.3
Q ss_pred eEecCCCEEEEEEeeCCCCcceEEEEeE
Q 043463 63 KVLHYNTYWEFQFRPNFWGTTRYYCWFA 90 (149)
Q Consensus 63 ~~L~~g~~~~f~F~~~~~~~T~f~C~f~ 90 (149)
..+.||+...+.|..+-.|+=.|+|...
T Consensus 61 ~~~~pg~~~~~~~t~~~~G~Y~y~C~~H 88 (100)
T 4hci_A 61 VVVESGKEKNITVKPKSAGTYELICRYH 88 (100)
T ss_dssp EEECTTCEEEEEECCCSCEEEEEECTTT
T ss_pred eeecCCcceeEEEecccCceEEEECccc
Confidence 3489999999999877677778999753
No 35
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=37.51 E-value=34 Score=23.39 Aligned_cols=24 Identities=17% Similarity=0.463 Sum_probs=19.1
Q ss_pred EecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
.+.||+++.+.|.. .|+-.|+|.+
T Consensus 98 ~l~pG~t~~~tF~~--~G~y~y~C~~ 121 (132)
T 3c75_A 98 MMTKDQAYAITFNE--AGSYDYFCTP 121 (132)
T ss_dssp CBCTTEEEEEEECS--CEEEEEECSS
T ss_pred ccCCCCEEEEEcCC--CEEEEEEeCC
Confidence 37899999999953 4777889987
No 36
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=35.26 E-value=45 Score=26.04 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=29.8
Q ss_pred cceEEEEEeCCCCCcceEEeeee--C-CCCCc--ceEecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPGVDLTFECKS--R-DDDFG--KKVLHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS--~-d~DlG--~~~L~~g~~~~f~F~~~ 78 (149)
.++.|+++|+|.....|..|=-. + .|... .-.+.||++|.+.|...
T Consensus 66 D~v~v~~~N~l~~~~siH~HG~~~~~~~DG~~~~~~~i~PG~t~~Y~~~~~ 116 (299)
T 3t9w_A 66 DTLEIDLVNTTDRVLSLHPHGVDYDVNSDGTLMNGSAVMPGQTRRYTWRSH 116 (299)
T ss_dssp CEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTTTCCBCTTCEEEEEEBCC
T ss_pred eEEEEEEEECCCCCccEEeCCcccCCccCCCccccCccCCCCeEEEEEEee
Confidence 57889999999755455555322 1 12111 23489999999999754
No 37
>2l16_A SEC-independent protein translocase protein tatad; membrane protein, protein transport; NMR {Bacillus subtilis}
Probab=35.08 E-value=20 Score=23.03 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=14.4
Q ss_pred chhHHHHHHHHHHHHHHhh
Q 043463 3 SFTIHDLLVILFVFPLFAY 21 (149)
Q Consensus 3 ~~~~~f~~~~~v~~~~f~~ 21 (149)
+++ .++++++|++++||.
T Consensus 6 g~~-ElliIlvVaLlvfGp 23 (78)
T 2l16_A 6 GIP-GLILIFVIALIIFGP 23 (78)
T ss_dssp CHH-HHHHHHHHHHHHSCT
T ss_pred CHH-HHHHHHHHHhheeCc
Confidence 444 788889999999983
No 38
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=34.86 E-value=23 Score=24.54 Aligned_cols=26 Identities=12% Similarity=0.273 Sum_probs=21.4
Q ss_pred EecCCCEEEEEEeeC---CCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPN---FWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~---~~~~T~f~C~f 89 (149)
.|.||++++..|... -.|+=.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~~ 114 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCSY 114 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECCS
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCC
Confidence 479999999999864 45777999997
No 39
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=34.64 E-value=16 Score=32.89 Aligned_cols=60 Identities=13% Similarity=0.054 Sum_probs=38.0
Q ss_pred ccceEEEEEeCCCCCcceEEeeee--CCCCCcc----eEecCCCEEEEEEeeC----------CCCcceEEEEeEe
Q 043463 32 EDVRHIRITNKIDPGVDLTFECKS--RDDDFGK----KVLHYNTYWEFQFRPN----------FWGTTRYYCWFAW 91 (149)
Q Consensus 32 ~~~~~V~I~N~L~~~~~L~vhCkS--~d~DlG~----~~L~~g~~~~f~F~~~----------~~~~T~f~C~f~w 91 (149)
+..+.|+++|.|.....|..|--. ++.|=|+ ..++||+.|.+.|... --|+--|.|+...
T Consensus 206 GD~v~v~~~N~l~~~~siH~HG~~~~~~~~dG~~~~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~ 281 (770)
T 2r7e_B 206 EDNIMVTFRNQASRPYSFYSSLISYEEDQRQGAEPRKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDL 281 (770)
T ss_dssp SSCEEEEEECCSSSCCCCCBTTCCCCCCSSSCTTTTSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSS
T ss_pred CCEEEEEEEECCCCCcceeecccccccccCCCCcCccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCc
Confidence 357799999999755555555433 2222132 4589999999999854 2344455576643
No 40
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=33.91 E-value=21 Score=24.37 Aligned_cols=25 Identities=28% Similarity=0.260 Sum_probs=21.3
Q ss_pred ecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 65 LHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 65 L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
|.||+.+++.|..+-.|+=.|.|.+
T Consensus 101 l~pGet~~v~f~~~~pG~y~f~C~~ 125 (139)
T 2aan_A 101 ANGNETVEVTFTAPAAGTYLYICTV 125 (139)
T ss_dssp BCTTCEEEEEEECCSSEEEEEECCS
T ss_pred cCCCCEEEEEEECCCCeEEEEEcCC
Confidence 7999999999986556777899987
No 41
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=33.90 E-value=39 Score=22.95 Aligned_cols=26 Identities=31% Similarity=0.386 Sum_probs=21.6
Q ss_pred EecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
.|.||+.....|..+-.|+-.|+|.+
T Consensus 99 ~l~pG~~~~~~~~~~~~G~y~f~C~~ 124 (140)
T 1qhq_A 99 MLNAGESGSVTFRTPAPGTYLYICTF 124 (140)
T ss_dssp CBCTTEEEEEEEECCSSEEEEEECCS
T ss_pred eeCCCceeEEEEEeCCCeeEEEEeCC
Confidence 47899999988886656778999997
No 42
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=32.51 E-value=99 Score=26.91 Aligned_cols=43 Identities=5% Similarity=-0.085 Sum_probs=28.0
Q ss_pred ceEecCCCEEEEEEeeC-CCCcceEEEEeEe------CCcee-EEEEEeec
Q 043463 62 KKVLHYNTYWEFQFRPN-FWGTTRYYCWFAW------RNEFK-WFDIYDHN 104 (149)
Q Consensus 62 ~~~L~~g~~~~f~F~~~-~~~~T~f~C~f~w------~~~~~-~fd~y~~~ 104 (149)
...+.||++|.+.|... --|+--|.|+... ..+.. -+.|....
T Consensus 146 ~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~ 196 (612)
T 2g23_A 146 DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDDE 196 (612)
T ss_dssp GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECHH
T ss_pred cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCcc
Confidence 34589999999999865 3565566688743 12223 56676544
No 43
>1gwy_A Sticholysin II; cytolysin, pore-forming toxin, hemolysis, cnidocyst; 1.71A {Stoichactis helianthus} SCOP: b.97.1.1 PDB: 1o71_A 1o72_A* 2ks3_A 2l38_A 2l2b_A 2ks4_A
Probab=32.15 E-value=89 Score=23.09 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=35.6
Q ss_pred cceEEEEEeCCCCC-cceEEeeeeCCCCCcc-eEecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPG-VDLTFECKSRDDDFGK-KVLHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~-~~L~vhCkS~d~DlG~-~~L~~g~~~~f~F~~~ 78 (149)
++..|+|.|+=+.- ..+.+.++|+.-|+.. +.++|...-.++|+.+
T Consensus 29 Rki~I~i~N~T~~~~~~~~vy~~SG~~~~~l~~~V~~~~a~~~~~~K~ 76 (175)
T 1gwy_A 29 RKIAVGIDNESGGTWTALNAYFRSGTTDVILPEFVPNTKALLYSGRKD 76 (175)
T ss_dssp SEEEEEEEEESSSCEEEEEEEEEESBCSSCCCSEECTTEEEEEEEECC
T ss_pred eeEEEEEecCCCCEEecceEEEecCcccCCCCcccCcccceeeEEecC
Confidence 78899999977433 5699999998766554 4588888888888765
No 44
>3lim_A Fragaceatoxin C; pore forming toxin, actinoporins; HET: LDA; 1.80A {Actinia fragacea} PDB: 3zwj_A 3zwg_A 1kd6_A 1iaz_A 1tzq_A
Probab=31.59 E-value=1e+02 Score=22.81 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=35.4
Q ss_pred cceEEEEEeCCCCC-cceEEeeeeCCCCCcceE-ecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPG-VDLTFECKSRDDDFGKKV-LHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~-~~L~vhCkS~d~DlG~~~-L~~g~~~~f~F~~~ 78 (149)
++..|+|.|+=+.- ..+.+.+.|+.-|...+. ++|...-.+.|+.+
T Consensus 30 Rk~~IeI~N~T~~~l~~p~vY~~SG~~~~pl~p~V~p~~a~~~~f~K~ 77 (178)
T 3lim_A 30 RKIAVGIDNESGKTWTAMNTYFRSGTSDIVLPHKVAHGKALLYNGQKN 77 (178)
T ss_dssp SEEEEEEEEESSSCEEEEEEEEEECBCCSCCCCEECTTEEEEEEEECC
T ss_pred eEEEEEEEeCCCCeeecceEEEecCccccCCCcccCcccceeEEEecC
Confidence 78999999987633 568999999887776654 77777777777754
No 45
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=30.77 E-value=46 Score=30.92 Aligned_cols=59 Identities=8% Similarity=-0.050 Sum_probs=39.4
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCC--------CC--Cc----ceEecCCCEEEEEEeeCCC----------CcceEEEE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRD--------DD--FG----KKVLHYNTYWEFQFRPNFW----------GTTRYYCW 88 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d--------~D--lG----~~~L~~g~~~~f~F~~~~~----------~~T~f~C~ 88 (149)
..+.|+++|+|.....|..|=-.-. .| -| ...++||++|.+.|...-- ||--|.|+
T Consensus 103 D~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~wYHsH 182 (1065)
T 2j5w_A 103 DKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTRIYHSH 182 (1065)
T ss_dssp CEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEEEEECC
T ss_pred eEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEEEEEec
Confidence 5678999999986666766664321 11 12 3568999999999986532 55555677
Q ss_pred eEe
Q 043463 89 FAW 91 (149)
Q Consensus 89 f~w 91 (149)
...
T Consensus 183 ~~~ 185 (1065)
T 2j5w_A 183 IDA 185 (1065)
T ss_dssp SSH
T ss_pred cCc
Confidence 643
No 46
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=28.81 E-value=55 Score=26.10 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=29.0
Q ss_pred cceEEEEEeCCCCCcceEEeeee--CCCC---CcceEecCCCEEEEEEeeC
Q 043463 33 DVRHIRITNKIDPGVDLTFECKS--RDDD---FGKKVLHYNTYWEFQFRPN 78 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS--~d~D---lG~~~L~~g~~~~f~F~~~ 78 (149)
..+.|+++|.+.....|..|--. ...| +..-.+.||+.|.+.|..+
T Consensus 85 d~v~v~~~N~l~~~~sih~HG~~~~~~~DG~~~t~~~I~PG~~~~y~f~~~ 135 (343)
T 3cg8_A 85 DTLHIEFTNTMDVRASLHVHGLDYEISSDGTAMNKSDVEPGGTRTYTWRTH 135 (343)
T ss_dssp CEEEEEEEECSSSCBCCEESSSBCCGGGSCCTTTTCSBCTTCEEEEEEECC
T ss_pred CEEEEEEEECCCCCeeEEecCcccCCcCCCcccccccccCCCEEEEEEEeC
Confidence 46679999999754445555432 1112 1112489999999999764
No 47
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=28.65 E-value=81 Score=22.13 Aligned_cols=25 Identities=32% Similarity=0.551 Sum_probs=19.7
Q ss_pred EecCCC--EEEEEEeeCCCCcceEEEEe
Q 043463 64 VLHYNT--YWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~--~~~f~F~~~~~~~T~f~C~f 89 (149)
.+.||+ +.++.|.. -.|+=.|.|.+
T Consensus 113 ~i~PG~sgt~t~tft~-~pGtY~y~C~~ 139 (154)
T 2cal_A 113 VPKDGKFGYTDFTWHP-TAGTYYYVCQI 139 (154)
T ss_dssp CCBTTBEEEEEEEECC-CSEEEEEECCS
T ss_pred ccCCCCceEEEEEEEE-CCceEEEECCC
Confidence 568999 88888886 56777888985
No 48
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=28.01 E-value=1.1e+02 Score=18.91 Aligned_cols=53 Identities=11% Similarity=0.197 Sum_probs=31.4
Q ss_pred eEEEEEeCCCCCcceEEeeeeCCCCCc-------ceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 35 RHIRITNKIDPGVDLTFECKSRDDDFG-------KKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 35 ~~V~I~N~L~~~~~L~vhCkS~d~DlG-------~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
-+|+++|.-.....+.++=-...+..- ...+.||+++.+.|.. .|+=.|.|..
T Consensus 26 ~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~--~G~y~y~C~~ 85 (98)
T 2plt_A 26 ETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTA--AGEYGYYCEP 85 (98)
T ss_dssp CEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCS--CEEEEEECGG
T ss_pred CEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCC--CeEEEEEcCC
Confidence 367788874323445444211111110 2357999999999963 5777899983
No 49
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=26.99 E-value=1.2e+02 Score=18.97 Aligned_cols=24 Identities=13% Similarity=-0.006 Sum_probs=19.6
Q ss_pred EecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
.+.||+++.+.|.. .|+-.|+|..
T Consensus 62 ~~~~g~~~~~tf~~--~G~y~y~C~~ 85 (98)
T 1iuz_A 62 LNSKGETVVRKLST--PGVYGVYCEP 85 (98)
T ss_dssp ECSTTCEEEEECCS--CEEEEEECTT
T ss_pred ccCCCCEEEEEcCC--CEEEEEEchh
Confidence 58999999999943 5777899986
No 50
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=25.63 E-value=1.4e+02 Score=20.64 Aligned_cols=44 Identities=18% Similarity=0.088 Sum_probs=25.5
Q ss_pred cceEEEEEeCCCCCcceEEeeeeC------------CCCCcceE-ecCCCEEEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSR------------DDDFGKKV-LHYNTYWEFQFR 76 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~------------d~DlG~~~-L~~g~~~~f~F~ 76 (149)
-.++|+|.|.-....+|.-+=|-- +.-+|.+- |.||+.|+++=.
T Consensus 30 faY~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtSg 86 (126)
T 1xvs_A 30 FAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSG 86 (126)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEeCC
Confidence 367899999654333444443432 22234443 899998877533
No 51
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=25.15 E-value=1.7e+02 Score=20.54 Aligned_cols=44 Identities=18% Similarity=0.097 Sum_probs=26.1
Q ss_pred cceEEEEEeCCCCCcceEEeeeeCCC------------CCcceE-ecCCCEEEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSRDD------------DFGKKV-LHYNTYWEFQFR 76 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~d~------------DlG~~~-L~~g~~~~f~F~ 76 (149)
-.++|+|.|.-....+|.-+=|--.| -+|.+- |.||+.|+++=.
T Consensus 35 FaY~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~YtSg 91 (139)
T 1xq4_A 35 FAYTVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSG 91 (139)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEEEE
T ss_pred EEEEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEcCC
Confidence 36789999965433444444443222 244443 899998887533
No 52
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=24.58 E-value=48 Score=22.82 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=20.4
Q ss_pred EecCCCEEEEEEeeC--CCCc-ceEEEEe
Q 043463 64 VLHYNTYWEFQFRPN--FWGT-TRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~--~~~~-T~f~C~f 89 (149)
.|.||++++..|... --|+ =.|+|.+
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~~ 113 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCSF 113 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECCS
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECC
Confidence 479999999999864 2453 6899997
No 53
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=24.51 E-value=1.5e+02 Score=20.47 Aligned_cols=43 Identities=16% Similarity=0.078 Sum_probs=25.3
Q ss_pred cceEEEEEeCCCCCcceEEeeeeC------------CCCCcceE-ecCCCEEEEEE
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSR------------DDDFGKKV-LHYNTYWEFQF 75 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~------------d~DlG~~~-L~~g~~~~f~F 75 (149)
-.++|+|.|.-....+|.-+=|-- +.-+|.+- |.||+.|+++=
T Consensus 31 faY~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 31 FAYSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTS 86 (127)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEEE
T ss_pred EEEEEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEeC
Confidence 357899999654333444433432 22245443 89999887753
No 54
>2k0m_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodospirillum rubrum atcc 11170}
Probab=24.37 E-value=33 Score=23.19 Aligned_cols=12 Identities=33% Similarity=1.096 Sum_probs=10.7
Q ss_pred ceEEEEecCccE
Q 043463 112 HCVWTIQPDGPC 123 (149)
Q Consensus 112 ~c~W~~r~DGiy 123 (149)
.|.|.+|.||-.
T Consensus 76 rCFfvvR~DGt~ 87 (104)
T 2k0m_A 76 QCFWILRTDGSE 87 (104)
T ss_dssp EEEEEEETTSCE
T ss_pred cEEEEEEeCCCe
Confidence 799999999964
No 55
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=23.64 E-value=46 Score=22.89 Aligned_cols=26 Identities=19% Similarity=0.319 Sum_probs=20.3
Q ss_pred EecCCCEEEEEEeeC--CCCc-ceEEEEe
Q 043463 64 VLHYNTYWEFQFRPN--FWGT-TRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~--~~~~-T~f~C~f 89 (149)
.|.||++++..|... -.|+ =.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~ 114 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCSF 114 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECCS
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEECC
Confidence 479999999999864 2344 6889997
No 56
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=23.15 E-value=72 Score=25.92 Aligned_cols=57 Identities=14% Similarity=0.073 Sum_probs=36.6
Q ss_pred ccceEEEEEeCCCCC--cceEEeeeeCCCCCc--ceEecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 32 EDVRHIRITNKIDPG--VDLTFECKSRDDDFG--KKVLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 32 ~~~~~V~I~N~L~~~--~~L~vhCkS~d~DlG--~~~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
+.++.|+++|.+... ..+..|--.. .|-+ ...+.|||.|.+.|..+-.|+-.|.|+.
T Consensus 202 G~~v~~rl~N~~~~~~~~~ih~Hg~~~-~DG~~~~~~i~pG~~~~~~~~~~~~G~~~yh~h~ 262 (447)
T 2dv6_A 202 GDTVELHLKNHKDSLMVHSVDFHGATG-PGGAAAFTQTDPGEETVVTFKALIPGIYVYHCAT 262 (447)
T ss_dssp TCEEEEEEEECTTCSSCBCCEETTCCS-GGGGGGGCCBCTTCEEEEEEECCSCEEEEEECCS
T ss_pred CCEEEEEEEeCCCCceeEEEeeccccC-CCCCCccEEeCCCCEEEEEEECCCCeEEEEEeCC
Confidence 357788999998522 3455554221 1211 1238999999999987655666667875
No 57
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=23.07 E-value=44 Score=24.30 Aligned_cols=26 Identities=15% Similarity=0.290 Sum_probs=21.0
Q ss_pred EecCCCEEEEEEeeC--CCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPN--FWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~--~~~~T~f~C~f 89 (149)
.|.||+++++.|... -.|+=.|+|.+
T Consensus 125 ~l~pGet~svtf~~~~lkpG~Y~f~Ct~ 152 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADGDYKFACTF 152 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTSCEEEECCS
T ss_pred eeCCCCEEEEEEecCCCCCcEEEEEcCC
Confidence 479999999999754 35777899997
No 58
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=22.28 E-value=1.1e+02 Score=18.99 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=19.4
Q ss_pred EecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
.+.||+++++.|.. .|+=.|+|..
T Consensus 63 ~~~~G~~~~~tf~~--~G~y~~~C~~ 86 (99)
T 1plc_A 63 LNAKGETFEVALSN--KGEYSFYCSP 86 (99)
T ss_dssp BCSTTCEEEEECCS--CEEEEEECGG
T ss_pred ccCCCCEEEEEECC--CceEEEEcCC
Confidence 47999999999963 5777899983
No 59
>1q90_L Cytochrome B6F complex subunit PETL; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.24.1
Probab=21.29 E-value=57 Score=17.42 Aligned_cols=12 Identities=17% Similarity=0.188 Sum_probs=6.4
Q ss_pred CCchhHHHHHHHH
Q 043463 1 MGSFTIHDLLVIL 13 (149)
Q Consensus 1 m~~~~~~f~~~~~ 13 (149)
|.+++ +++.+++
T Consensus 1 M~tii-sYf~fL~ 12 (32)
T 1q90_L 1 MLTIT-SYVGLLI 12 (32)
T ss_dssp CHHHH-HHHHHHH
T ss_pred CchHH-HHHHHHH
Confidence 66777 4444333
No 60
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=21.23 E-value=1.6e+02 Score=20.59 Aligned_cols=44 Identities=16% Similarity=0.051 Sum_probs=25.8
Q ss_pred cceEEEEEeCCCCCcceEEeeeeC------------CCCCcceE-ecCCCEEEEEEe
Q 043463 33 DVRHIRITNKIDPGVDLTFECKSR------------DDDFGKKV-LHYNTYWEFQFR 76 (149)
Q Consensus 33 ~~~~V~I~N~L~~~~~L~vhCkS~------------d~DlG~~~-L~~g~~~~f~F~ 76 (149)
-.++|+|.|.-....+|.-+=|-- +.-+|.+- |.||+.|+++=.
T Consensus 30 faY~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~YtSg 86 (134)
T 1tza_A 30 FSYTITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYTSG 86 (134)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEEEE
T ss_pred EEEEEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEcCC
Confidence 367899999654334444444432 22344443 899998887543
No 61
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=20.39 E-value=59 Score=22.34 Aligned_cols=26 Identities=23% Similarity=0.338 Sum_probs=19.9
Q ss_pred EecCCCEEEEEEeeC--CCCc-ceEEEEe
Q 043463 64 VLHYNTYWEFQFRPN--FWGT-TRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~--~~~~-T~f~C~f 89 (149)
.|.||++++..|... -.|. =.|+|.+
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~~ 114 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCSF 114 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECCS
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeCC
Confidence 479999999999864 2333 6888987
No 62
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=20.09 E-value=42 Score=21.80 Aligned_cols=24 Identities=17% Similarity=0.463 Sum_probs=19.7
Q ss_pred EecCCCEEEEEEeeCCCCcceEEEEe
Q 043463 64 VLHYNTYWEFQFRPNFWGTTRYYCWF 89 (149)
Q Consensus 64 ~L~~g~~~~f~F~~~~~~~T~f~C~f 89 (149)
.|.+|+.+.+.|.. .|+-.|+|.+
T Consensus 72 ~l~~g~~~~~tf~~--~G~y~~~C~~ 95 (106)
T 1id2_A 72 MMTKDQAYAITFNE--AGSYDYFCTP 95 (106)
T ss_dssp CBCTTEEEEEEECS--CEEEEEECSS
T ss_pred ccCCCCEEEEEeCC--CEEEEEEeCC
Confidence 47899999999943 5778999987
Done!