Your job contains 1 sequence.
>043468
MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ
LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS
RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT
SSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWS
VALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGF
WTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQ
QYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFAG
VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIY
NGFVVWLIERNHWPELTGSALHQTGTFFWLSFNLHGEKLHSNLSRMTTLVWLFVALVISQ
TYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEVAEA
KIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIAS
EKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFLWRCNWKINENLLVNKKIRC
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043468
(720 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2066107 - symbol:GLR2.7 "glutamate receptor 2.... 603 3.6e-117 3
TAIR|locus:2066086 - symbol:GLR2.8 "glutamate receptor 2.... 580 1.6e-108 3
TAIR|locus:2047256 - symbol:GLR2.2 "glutamate receptor 2.... 544 1.3e-107 3
TAIR|locus:2066148 - symbol:GLR2.9 "glutamate receptor 2.... 573 8.2e-107 3
TAIR|locus:2047251 - symbol:GLR2.3 "glutamate receptor 2.... 540 2.7e-102 3
TAIR|locus:2122128 - symbol:GLUR2 "glutamate receptor 2" ... 536 5.6e-99 3
TAIR|locus:2081805 - symbol:GLR3.6 "glutamate receptor 3.... 549 8.2e-98 3
TAIR|locus:2207165 - symbol:GLR3.4 "AT1G05200" species:37... 533 4.3e-91 3
TAIR|locus:2206095 - symbol:GLR3.3 "glutamate receptor 3.... 560 7.3e-91 3
TAIR|locus:2181196 - symbol:GLR2.1 "glutamate receptor 2.... 622 4.5e-79 2
TAIR|locus:2166001 - symbol:ATGLR1.2 species:3702 "Arabid... 774 7.1e-77 1
TAIR|locus:2166006 - symbol:GLR1.3 "glutamate receptor 1.... 768 3.1e-76 1
TAIR|locus:2062586 - symbol:GLR5 "glutamate receptor 5" s... 476 3.3e-76 3
TAIR|locus:2102975 - symbol:GLR1.1 "glutamate receptor 1.... 727 6.7e-72 1
TAIR|locus:2079681 - symbol:GLR1.4 "glutamate receptor 1.... 682 4.0e-67 1
FB|FBgn0026255 - symbol:clumsy "clumsy" species:7227 "Dro... 266 1.4e-21 2
UNIPROTKB|E7EPY9 - symbol:GRIK1 "Glutamate receptor ionot... 223 6.3e-18 2
UNIPROTKB|E7EPZ0 - symbol:GRIK1 "Glutamate receptor ionot... 223 9.2e-18 2
UNIPROTKB|I3LT35 - symbol:GRIK1 "Uncharacterized protein"... 221 1.5e-17 2
UNIPROTKB|Q38PU3 - symbol:GRIK2 "Glutamate receptor ionot... 217 2.0e-17 2
MGI|MGI:95815 - symbol:Grik2 "glutamate receptor, ionotro... 217 2.0e-17 2
UNIPROTKB|F1LP48 - symbol:Grik2 "Glutamate receptor ionot... 216 2.3e-17 2
UNIPROTKB|F1M4B0 - symbol:Grik1 "Glutamate receptor ionot... 217 2.5e-17 2
RGD|2733 - symbol:Grik2 "glutamate receptor, ionotropic, ... 216 2.6e-17 2
UNIPROTKB|P42260 - symbol:Grik2 "Glutamate receptor ionot... 216 2.6e-17 2
UNIPROTKB|F8WEZ8 - symbol:GRIK2 "Glutamate receptor ionot... 215 2.9e-17 2
UNIPROTKB|Q13002 - symbol:GRIK2 "Glutamate receptor ionot... 215 3.4e-17 2
UNIPROTKB|F1P7K5 - symbol:GRIK2 "Uncharacterized protein"... 211 7.8e-17 2
UNIPROTKB|F1NU20 - symbol:GRIK2 "Uncharacterized protein"... 211 8.3e-17 2
UNIPROTKB|F1P7K6 - symbol:GRIK2 "Uncharacterized protein"... 211 8.7e-17 2
UNIPROTKB|F1MG21 - symbol:GRIK2 "Uncharacterized protein"... 211 9.2e-17 2
UNIPROTKB|Q38PU0 - symbol:GRIK5 "KA2" species:9541 "Macac... 183 7.8e-16 3
UNIPROTKB|J9P242 - symbol:GRIK5 "Uncharacterized protein"... 183 1.1e-15 3
UNIPROTKB|F1RYR0 - symbol:GRIK5 "Uncharacterized protein"... 169 1.4e-15 3
MGI|MGI:95818 - symbol:Grik5 "glutamate receptor, ionotro... 182 1.5e-15 3
RGD|2735 - symbol:Grik5 "glutamate receptor, ionotropic, ... 182 1.5e-15 3
UNIPROTKB|F1PHA8 - symbol:GRIK4 "Uncharacterized protein"... 181 1.7e-15 3
UNIPROTKB|Q16478 - symbol:GRIK5 "Glutamate receptor ionot... 182 1.9e-15 3
UNIPROTKB|E1C2Q1 - symbol:GRIK4 "Uncharacterized protein"... 181 2.4e-15 3
UNIPROTKB|D4ACE2 - symbol:Grik1 "Glutamate receptor ionot... 166 2.5e-15 3
UNIPROTKB|Q16099 - symbol:GRIK4 "Glutamate receptor ionot... 179 2.8e-15 3
MGI|MGI:95817 - symbol:Grik4 "glutamate receptor, ionotro... 176 2.9e-15 3
RGD|2734 - symbol:Grik4 "glutamate receptor, ionotropic, ... 175 3.8e-15 3
UNIPROTKB|Q01812 - symbol:Grik4 "Glutamate receptor ionot... 175 3.8e-15 3
FB|FBgn0028422 - symbol:GluRIID "Glutamate receptor IID" ... 195 6.2e-15 2
MGI|MGI:95814 - symbol:Grik1 "glutamate receptor, ionotro... 225 7.0e-15 1
FB|FBgn0046113 - symbol:GluRIIC "Glutamate receptor IIC" ... 173 2.1e-14 3
UNIPROTKB|H0Y2V8 - symbol:GRIN2C "Glutamate receptor, ion... 140 4.5e-14 3
UNIPROTKB|E2RFB5 - symbol:GRIK5 "Uncharacterized protein"... 168 4.8e-14 3
UNIPROTKB|F1NZT2 - symbol:GRIK1 "Uncharacterized protein"... 152 9.7e-14 3
UNIPROTKB|F1P0E1 - symbol:GRIA4 "Uncharacterized protein"... 107 1.0e-13 5
UNIPROTKB|E1BKL6 - symbol:GRIK5 "Uncharacterized protein"... 181 1.2e-13 3
UNIPROTKB|Q14957 - symbol:GRIN2C "Glutamate receptor iono... 140 1.5e-13 3
ZFIN|ZDB-GENE-030131-6502 - symbol:grik1a "glutamate rece... 180 2.1e-13 2
FB|FBgn0038837 - symbol:CG3822 species:7227 "Drosophila m... 149 2.4e-13 3
ZFIN|ZDB-GENE-081104-209 - symbol:si:ch211-264f5.8 "si:ch... 163 2.6e-13 3
FB|FBgn0004620 - symbol:GluRIIA "Glutamate receptor IIA" ... 103 2.9e-13 4
UNIPROTKB|F1N982 - symbol:GRIA4 "Uncharacterized protein"... 102 3.5e-13 5
RGD|2739 - symbol:Grin2c "glutamate receptor, ionotropic,... 138 4.0e-13 3
UNIPROTKB|F1P0E2 - symbol:GRIA4 "Uncharacterized protein"... 102 6.0e-13 5
MGI|MGI:95822 - symbol:Grin2c "glutamate receptor, ionotr... 139 6.3e-13 3
MGI|MGI:95820 - symbol:Grin2a "glutamate receptor, ionotr... 127 1.2e-12 3
UNIPROTKB|G3V9C5 - symbol:Grin2a "RCG49797, isoform CRA_b... 127 1.2e-12 3
UNIPROTKB|B4MU83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 132 1.3e-12 3
UNIPROTKB|J9P9T9 - symbol:GRIN2C "Uncharacterized protein... 137 1.4e-12 3
UNIPROTKB|E2RG96 - symbol:GRIN2C "Uncharacterized protein... 137 1.6e-12 3
UNIPROTKB|F1P5Y1 - symbol:GRIA1 "Uncharacterized protein"... 100 2.0e-12 5
UNIPROTKB|P48058 - symbol:GRIA4 "Glutamate receptor 4" sp... 99 2.0e-12 5
RGD|2737 - symbol:Grin2a "glutamate receptor, ionotropic,... 127 2.0e-12 3
WB|WBGene00003775 - symbol:nmr-2 species:6239 "Caenorhabd... 122 2.9e-12 3
UNIPROTKB|F1NAK2 - symbol:GRIN2A "Uncharacterized protein... 129 2.9e-12 3
ZFIN|ZDB-GENE-070821-5 - symbol:grik4 "glutamate receptor... 150 3.0e-12 3
UNIPROTKB|Q12879 - symbol:GRIN2A "Glutamate receptor iono... 127 3.2e-12 3
UNIPROTKB|Q5IS45 - symbol:GRIN2A "Glutamate receptor iono... 127 3.2e-12 3
UNIPROTKB|I3L8N9 - symbol:GRIA4 "Uncharacterized protein"... 94 3.8e-12 5
UNIPROTKB|F1MP46 - symbol:GRIN2C "Uncharacterized protein... 138 4.2e-12 3
UNIPROTKB|E7ENK3 - symbol:GRIK1 "Glutamate receptor ionot... 132 4.5e-12 3
UNIPROTKB|H7BYG7 - symbol:GRIK1 "Glutamate receptor ionot... 132 5.3e-12 3
FB|FBgn0010399 - symbol:Nmdar1 "NMDA receptor 1" species:... 129 5.8e-12 4
UNIPROTKB|B3P2E5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 5.8e-12 4
UNIPROTKB|B4I414 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 5.8e-12 4
UNIPROTKB|B4PVB0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 5.8e-12 4
UNIPROTKB|B4QWW7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 5.8e-12 4
UNIPROTKB|G3V164 - symbol:GRIA4 "Glutamate receptor, iono... 94 6.0e-12 5
UNIPROTKB|P39086 - symbol:GRIK1 "Glutamate receptor ionot... 132 6.4e-12 3
UNIPROTKB|E9PD61 - symbol:GRIK1 "Glutamate receptor ionot... 132 6.4e-12 3
UNIPROTKB|B4GF83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 7.5e-12 4
UNIPROTKB|Q296F7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 7.5e-12 4
WB|WBGene00001614 - symbol:glr-3 species:6239 "Caenorhabd... 109 8.9e-12 4
UNIPROTKB|F1M526 - symbol:Grik1 "Glutamate receptor ionot... 130 9.2e-12 3
UNIPROTKB|F1RGG5 - symbol:F1RGG5 "Uncharacterized protein... 140 9.2e-12 3
UNIPROTKB|Q38PU5 - symbol:GRIA4 "Glutamate receptor 4" sp... 91 1.4e-11 5
FB|FBgn0053513 - symbol:Nmdar2 "NMDA receptor 2" species:... 113 1.6e-11 5
UNIPROTKB|F8W7X3 - symbol:GRIK1 "Glutamate receptor ionot... 127 2.2e-11 3
UNIPROTKB|F5H1W5 - symbol:GRIK1 "Glutamate receptor ionot... 127 2.2e-11 3
UNIPROTKB|B3LZ39 - symbol:Nmdar1 "Glutamate [NMDA] recept... 129 2.3e-11 4
RGD|2732 - symbol:Grik1 "glutamate receptor, ionotropic, ... 128 2.4e-11 3
UNIPROTKB|P22756 - symbol:Grik1 "Glutamate receptor ionot... 128 2.4e-11 3
ZFIN|ZDB-GENE-070424-129 - symbol:grin2aa "glutamate rece... 123 3.4e-11 3
UNIPROTKB|J9NV46 - symbol:GRIK1 "Uncharacterized protein"... 124 4.3e-11 3
WARNING: Descriptions of 207 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2066107 [details] [associations]
symbol:GLR2.7 "glutamate receptor 2.7" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY495450
EMBL:AY072069 EMBL:AY080587 IPI:IPI00533666 PIR:T02742
RefSeq:NP_180476.3 UniGene:At.38520 ProteinModelPortal:Q8LGN0
PaxDb:Q8LGN0 PRIDE:Q8LGN0 EnsemblPlants:AT2G29120.1 GeneID:817460
KEGG:ath:AT2G29120 TAIR:At2g29120 eggNOG:NOG263961
InParanoid:Q8LGN0 OMA:DSENSFR PhylomeDB:Q8LGN0
ProtClustDB:CLSN2683703 Genevestigator:Q8LGN0 Uniprot:Q8LGN0
Length = 952
Score = 603 (217.3 bits), Expect = 3.6e-117, Sum P(3) = 3.6e-117
Identities = 132/344 (38%), Positives = 204/344 (59%)
Query: 256 LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPK 315
LL+ + F+GL G+ E +N ++ + + +IN++G R +G W G I++ K
Sbjct: 371 LLKALSNVRFNGLAGEFELINGQLESS-VFDVINIIGSEERIIGLWRPSNG----IVNAK 425
Query: 316 Y-NCSSM--KDLGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRN 372
N +S+ + LG V WPG PKGW +P + LR+G+P+ F ++V+ + D + N
Sbjct: 426 SKNTTSVLGERLGPVIWPGKSKDVPKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISN 485
Query: 373 FTYFGGFSIELFKALVEKLPFYLPYNFIPF---NGSYDDLVKQLYLNNFAGVVGDVAIVA 429
G+ IE+F+A+++KLP+ + +I F + +YD++V Q+Y + VVGDV IVA
Sbjct: 486 AMTPTGYCIEIFEAVLKKLPYSVIPKYIAFLSPDENYDEMVYQVYTGAYDAVVGDVTIVA 545
Query: 430 RRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIE 489
R Y DFT PYTESG+ M+ P++ + N T +FL+P++ +W+ A ++ GF+VW++E
Sbjct: 546 NRSLYVDFTLPYTESGVSMMVPLKDNKN-TWVFLRPWSLDLWVTTACFFVFIGFIVWILE 604
Query: 490 RNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVISQTYTAN 545
+ G HQ GT FW +F+ H EK+ SNL+R LVW FV LV+ Q+YTAN
Sbjct: 605 HRVNTDFRGPPHHQIGTSFWFAFSTMNFAHREKVVSNLARFVVLVWCFVVLVLIQSYTAN 664
Query: 546 LTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDL-KSR 588
LTS T + L+PTV N + L N IGY R G + +L KS+
Sbjct: 665 LTSFFTVKLLQPTVTNWKDLIKFNKNIGYQR--GTFVRELLKSQ 706
Score = 432 (157.1 bits), Expect = 3.6e-117, Sum P(3) = 3.6e-117
Identities = 97/260 (37%), Positives = 160/260 (61%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ +++V AI+GP+TS + + +A K Q+P ++F+ P + P+ ++A+ +
Sbjct: 96 LDLIKNEQVSAIIGPRTSMQAEFMIRLADKSQVPTITFSATCPLLTSINSPYFVRATLDD 155
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+Q+KAIAAIV+S+ W V IY D + GILP L+DAL++ A +++ +P +
Sbjct: 156 SSQVKAIAAIVKSFGWRNVVAIYVD-NEFGEGILPLLTDALQDVQAFVVNRCLIPQEAND 214
Query: 121 -RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
++ +EL KL Q RVFVVH+ L F+KA ++ MME+ Y+W+ TD +L+ S
Sbjct: 215 DQILKELYKLMTMQTRVFVVHMPPTLGFRFFQKAREIGMMEEGYVWLLTDGVMNLLKSNE 274
Query: 180 T-SSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAV 238
SS+ +MQG+LGVRSH P+ K K ++F R+ K F P++ N+ E A++ YD++
Sbjct: 275 RGSSLENMQGVLGVRSHIPKSK-KLKNFRLRWEKMF----PKKGNDEEMNIFALRAYDSI 329
Query: 239 WSVALAMEQKSEKLNQKLLR 258
++A+A+E K N K LR
Sbjct: 330 TALAMAVE----KTNIKSLR 345
Score = 171 (65.3 bits), Expect = 3.6e-117, Sum P(3) = 3.6e-117
Identities = 39/111 (35%), Positives = 62/111 (55%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A F EVA K+ L++ +T+ P++K G GF FPK SPL V A+L V++ +++
Sbjct: 733 ASFDEVAYIKVILSQNSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQ 792
Query: 652 ELETSMIAS-EKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
+E C ++N + LS S FW LF+++G S +AL+IF+
Sbjct: 793 HIENKWFKKPNNCPDLNTSLSSN--HLSLSSFWGLFLIAGIASFLALLIFV 841
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 376 FG-GFSIELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLY 414
FG G L AL + F + IP + D ++K+LY
Sbjct: 183 FGEGILPLLTDALQDVQAFVVNRCLIPQEANDDQILKELY 222
>TAIR|locus:2066086 [details] [associations]
symbol:GLR2.8 "glutamate receptor 2.8" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828 GO:GO:0071230
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 eggNOG:NOG263961
ProtClustDB:CLSN2683703 EMBL:AJ311495 IPI:IPI00537052 PIR:T02741
RefSeq:NP_180475.2 UniGene:At.13039 ProteinModelPortal:Q9C5V5
EnsemblPlants:AT2G29110.1 GeneID:817459 KEGG:ath:AT2G29110
TAIR:At2g29110 InParanoid:Q9C5V5 OMA:DSEDSIW PhylomeDB:Q9C5V5
Genevestigator:Q9C5V5 GermOnline:AT2G29110 Uniprot:Q9C5V5
Length = 947
Score = 580 (209.2 bits), Expect = 1.6e-108, Sum P(3) = 1.6e-108
Identities = 125/328 (38%), Positives = 186/328 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDL 324
F+GL G+ +++++ + ++IIN +G R +GFWT G + + K + +
Sbjct: 373 FNGLAGRFNLIDRQLE-SPKFEIINFVGNEERIVGFWTPSNGLVN-VNSNKTTSFTGERF 430
Query: 325 GQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELF 384
G + WPG PKGW +P + +++GVP+ F +V V D + N T G++I++F
Sbjct: 431 GPLIWPGKSTIVPKGWEIPTNGKKIKVGVPVKKGFFNFVEVITDPITNITTPKGYAIDIF 490
Query: 385 KALVEKLPF-YLP--YNFIPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPY 441
+A ++KLP+ +P Y F + YDDLV ++ VVGDV I A R YADFT PY
Sbjct: 491 EAALKKLPYSVIPQYYRFESPDDDYDDLVYKVDNGTLDAVVGDVTITAYRSLYADFTLPY 550
Query: 442 TESGLVMIFPVQKSGNK-TLLFLKPFTRAVWILVAVISIYNGFVVWLIERNHWPELTGSA 500
TESG+ M+ PV+ + NK T +FLKP+ +W+ A + GFVVWL E + G
Sbjct: 551 TESGVSMMVPVRDNENKNTWVFLKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPP 610
Query: 501 LHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLE 556
HQ GT FW SF+ H EK+ SNL+R +VW FV LV++Q+YTANLTS LT + +
Sbjct: 611 HHQIGTSFWFSFSTMVFAHREKVVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQ 670
Query: 557 PTVNNIETLQSSNAIIGYSRCLGDYASD 584
P N++ L + +GY G + D
Sbjct: 671 PAAINVKDLIKNGDYVGYQH--GAFVKD 696
Score = 366 (133.9 bits), Expect = 1.6e-108, Sum P(3) = 1.6e-108
Identities = 81/248 (32%), Positives = 148/248 (59%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ +++V AI+GP S + + ++A+K Q+P +SF+ +P + + + ++ + +
Sbjct: 90 LDLIQNEQVSAIIGPIDSMQAKFMIKLANKTQVPTISFSATSPLLTSIKSDYFVRGTIDD 149
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
Q+KAIAAI +S+ W V IY D + GI+P+L DAL++ ++ +
Sbjct: 150 SYQVKAIAAIFESFGWRSVVAIYVD-NELGEGIMPYLFDALQDV--QVDRSVIPSEANDD 206
Query: 121 RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT 180
++ +EL KL Q RVFVVH++ LA +FEKA ++ MME+ Y+W+ T+ T ++ I+
Sbjct: 207 QILKELYKLMTRQTRVFVVHMASRLASRIFEKATEIGMMEEGYVWLMTNGMTHMMRHIHH 266
Query: 181 S-SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
S++++ G+LGVRSH P+ K +DF R+++ F E P + + + YD+
Sbjct: 267 GRSLNTIDGVLGVRSHVPKSKG-LEDFRLRWKRNFKKENPWLRD--DLSIFGLWAYDSTT 323
Query: 240 SVALAMEQ 247
++A+A+E+
Sbjct: 324 ALAMAVEK 331
Score = 180 (68.4 bits), Expect = 1.6e-108, Sum P(3) = 1.6e-108
Identities = 39/119 (32%), Positives = 65/119 (54%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
L + A F EVA + L++YC + + PT+K G GFAFP+ SPL V +A+L V
Sbjct: 721 LSNGSISAAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNV 780
Query: 645 SESGKLRELETSMIASEK-CMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFLW 702
++ +++ +E + C + + LS FW LF+++G S +AL+IF++
Sbjct: 781 TQGDEMQHIENKWFMKQNDCPDPKTALSSN--RLSLRSFWGLFLIAGIASFLALLIFVF 837
>TAIR|locus:2047256 [details] [associations]
symbol:GLR2.2 "glutamate receptor 2.2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:AC007266 GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558
KO:K05387 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 ProtClustDB:CLSN2683132 EMBL:AY072068
IPI:IPI00519275 PIR:B84640 RefSeq:NP_180048.1 UniGene:At.39113
ProteinModelPortal:Q9SHV1 PRIDE:Q9SHV1 EnsemblPlants:AT2G24720.1
GeneID:817008 KEGG:ath:AT2G24720 TAIR:At2g24720 eggNOG:NOG288203
InParanoid:Q9SHV1 OMA:EMPENSN PhylomeDB:Q9SHV1
Genevestigator:Q9SHV1 GermOnline:AT2G24720 Uniprot:Q9SHV1
Length = 920
Score = 544 (196.6 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 131/394 (33%), Positives = 204/394 (51%)
Query: 255 KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTII-D 313
KLL+ + F GL G F++ ++ P+ ++I+N++G R +GFWT G G + +
Sbjct: 357 KLLQTVSTVQFKGLAGDFHFVSGQLQPS-VFEIVNMIGTGERSIGFWTEGNGLVKKLDQE 415
Query: 314 PKY--NCSSMKD-LGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDEL 370
P+ S+ D L + WPG PKGW +P + LRIGVP F V V D +
Sbjct: 416 PRSIGTLSTWPDHLKHIIWPGEAVSVPKGWEIPTNGKKLRIGVPKRIGFTDLVKVTRDPI 475
Query: 371 RNFTYFGGFSIELFKALVEKLPFYLPYNFIPFN-------GSYDDLVKQLYLNNFAGVVG 423
N T GF I+ F+A+++ +P+ + Y F PF G+++DLV Q+YL F VVG
Sbjct: 476 TNSTVVKGFCIDFFEAVIQAMPYDVSYEFFPFEKPNGEPAGNHNDLVHQVYLGQFDAVVG 535
Query: 424 DVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNG 482
D I+A R + DFT P+ +SG+ +I P++ + FLKP + +W+ V G
Sbjct: 536 DTTILANRSSFVDFTLPFMKSGVGLIVPLKDEVKRDKFSFLKPLSIELWLTTLVFFFLVG 595
Query: 483 FVVWLIERNHWPELTGSALHQTGTFFWLSFNLH----GEKLHSNLSRMTTLVWLFVALVI 538
VW +E + G A +Q T FW +F+ E++ S +R + W FV LV+
Sbjct: 596 ISVWTLEHRVNSDFRGPANYQASTIFWFAFSTMVFAPRERVLSFGARSLVVTWYFVLLVL 655
Query: 539 SQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEVA 598
+Q+YTA+L S+LT++ L PT+ ++ +L +GY R + K +TG F + +
Sbjct: 656 TQSYTASLASLLTSQQLNPTITSMSSLLHRGETVGYQRT--SFILG-KLNETG--FPQSS 710
Query: 599 EAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSP 632
A+ C GP K GG+ AF G+P
Sbjct: 711 LVPFDTAEECDELLKKGP--KNGGVAAAF-LGTP 741
Score = 414 (150.8 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 102/330 (30%), Positives = 184/330 (55%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ +++V+AILGP TS + + EI K ++PV+S++ +P+ + R P+ +A+
Sbjct: 89 IDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYED 148
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP-HFPS 119
+Q+ AI AI++ + W +V +Y D ++ GI+P L+D+L++ I + +P +
Sbjct: 149 SSQVHAIKAIIKLFGWREVVPVYID-NTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATD 207
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
+S EL K+ RVF+VH+S LA +F KA ++ +M+ Y+WI T+ + SIN
Sbjct: 208 QDISVELLKMMNMPTRVFIVHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSIN 267
Query: 180 TSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
+ I +M+G+LG++++ P+ K + F R+++RF P+ + N + YDA
Sbjct: 268 ETGIEAMEGVLGIKTYIPKSKD-LETFRSRWKRRF----PQMELN----VYGLWAYDATT 318
Query: 240 SVALAMEQK----------------SEK----LNQ---KLLRRILLSDFDGLTGKVEFMN 276
++A+A+E SE L+Q KLL+ + F GL G F++
Sbjct: 319 ALAMAIEDAGINNMTFSNVDTGKNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVS 378
Query: 277 QKVAPAHTYQIINLMGKSYRELGFWTYGLG 306
++ P+ ++I+N++G R +GFWT G G
Sbjct: 379 GQLQPS-VFEIVNMIGTGERSIGFWTEGNG 407
Score = 161 (61.7 bits), Expect = 1.3e-107, Sum P(3) = 1.3e-107
Identities = 41/128 (32%), Positives = 63/128 (49%)
Query: 586 KSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVS 645
K+ A FL ++FL +YC + + + V G GF FP GSPL+ V A+LKV+
Sbjct: 729 KNGGVAAAFLGTPYVRLFLGQYCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVA 788
Query: 646 ESGKLRELETSMIASEK--CMEVNLHDDDDIS----SLSPSGFWVLFVLSGGISTIALVI 699
ES K ELE + ++ C + + D + + L FW LF++ + +AL
Sbjct: 789 ESPKAVELEHAWFKKKEQSCPDPVTNPDSNPTVTAIQLGVGSFWFLFLVVFVVCVLALGK 848
Query: 700 FLWRCNWK 707
F + WK
Sbjct: 849 FTFCFLWK 856
>TAIR|locus:2066148 [details] [associations]
symbol:GLR2.9 "glutamate receptor 2.9" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
eggNOG:NOG263961 ProtClustDB:CLSN2683703 IPI:IPI00520184 PIR:T02740
RefSeq:NP_180474.1 UniGene:At.52963 ProteinModelPortal:O81078
IntAct:O81078 PaxDb:O81078 PRIDE:O81078 EnsemblPlants:AT2G29100.1
GeneID:817458 KEGG:ath:AT2G29100 TAIR:At2g29100 InParanoid:O81078
OMA:WIFTESA PhylomeDB:O81078 Genevestigator:O81078
GermOnline:AT2G29100 Uniprot:O81078
Length = 940
Score = 573 (206.8 bits), Expect = 8.2e-107, Sum P(3) = 8.2e-107
Identities = 123/328 (37%), Positives = 189/328 (57%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDL 324
F+GL G+ + ++ ++ + ++IIN +G R +GFWT G D S+ K L
Sbjct: 370 FNGLAGEFKLIDGQLQ-SPKFEIINFVGNEERIIGFWTPRDGLMDA------TSSNKKTL 422
Query: 325 GQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELF 384
G V WPG PKGW +P K LR+GVP+ F +V V + + N G++IE+F
Sbjct: 423 GPVIWPGKSKIVPKGWEIPGKK--LRVGVPMKKGFFDFVKVTINPITNKKTPTGYAIEIF 480
Query: 385 KALVEKLPFYLPYNFIPFNG--SYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYT 442
+A +++LP+ + ++ F +Y++LV Q+Y + VVGD+ I A R YADFT P+T
Sbjct: 481 EAALKELPYLVIPEYVSFESPNNYNNLVYQVYDKTWDAVVGDITITANRSLYADFTLPFT 540
Query: 443 ESGLVMIFPVQKSGNK-TLLFLKPFTRAVWILVAVISIYNGFVVWLIERNHWPELTGSAL 501
ESG+ M+ PV+ + NK T +FL+P++ +W+ ++ GFVVWL E + G
Sbjct: 541 ESGVSMMVPVRDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQ 600
Query: 502 HQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEP 557
+Q GT W SF+ H E + SNL+R +VW FV LV++Q+YTA+LTS LT + L+P
Sbjct: 601 YQIGTSLWFSFSTMVFAHRENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQP 660
Query: 558 TVNNIETLQSSNAIIGYSRCLGDYASDL 585
TV N+ L + +GY G + D+
Sbjct: 661 TVTNVNDLIKNRDCVGYQG--GAFVKDI 686
Score = 382 (139.5 bits), Expect = 8.2e-107, Sum P(3) = 8.2e-107
Identities = 81/252 (32%), Positives = 151/252 (59%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ +++V AI+GP S + + ++A+K Q+P ++F+ +P + + P+ ++A+ +
Sbjct: 87 LDLIKTEQVSAIIGPINSMQADFMIKLANKTQVPTITFSATSPLLTSIKSPYFVRATIDD 146
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+Q++AIA+I + + W +V IY D + G +P L DAL++ E+ + P
Sbjct: 147 SSQVRAIASIFKFFRWRRVVAIYVD-NEFGEGFMPFLFDALQDV--EVKRSVIPPEAIDD 203
Query: 121 RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT 180
+ +EL KL Q RVFVVH+ LA+ +F+ A + MME+ Y+W+ T+ T ++ IN
Sbjct: 204 EIQKELRKLMERQARVFVVHMESSLALRVFQIARDIGMMEEGYVWLMTNGMTHMMRHINN 263
Query: 181 S-SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
S+++++G+LGVRSH P+ K + DF R+++ F E P + + A+ YD++
Sbjct: 264 GRSLNTIEGVLGVRSHVPKSK-ELGDFRLRWKRTFEKENPSMRD--DLNVFALWAYDSIT 320
Query: 240 SVALAMEQKSEK 251
++A A+E+ + K
Sbjct: 321 ALAKAVEKANTK 332
Score = 155 (59.6 bits), Expect = 8.2e-107, Sum P(3) = 8.2e-107
Identities = 38/123 (30%), Positives = 64/123 (52%)
Query: 580 DYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIE 639
D S KS+ A F EVA K L++ C + + PT+K GG GFAFPK SPL
Sbjct: 708 DLLSKGKSKGIAAAFDEVAYLKAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSR 767
Query: 640 ALLKVSESGKLRELETSMIASEK-CMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALV 698
A+L ++++ +++E + C + + L+ S F LF+++G + +L+
Sbjct: 768 AILNLTQNNVTQQIEDRWFPKKNDCPDPMTALSSN--RLNLSSFLGLFLIAGTAISFSLL 825
Query: 699 IFL 701
+F+
Sbjct: 826 VFV 828
Score = 37 (18.1 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 220 EEDNNHEPGALAVQTYDAVWSVAL 243
E NN+ L Q YD W +
Sbjct: 499 ESPNNYNN--LVYQVYDKTWDAVV 520
>TAIR|locus:2047251 [details] [associations]
symbol:GLR2.3 "glutamate receptor 2.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 EMBL:AC007266 GO:GO:0071230
eggNOG:COG0683 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
ProtClustDB:CLSN2683132 IPI:IPI00526740 PIR:A84640
RefSeq:NP_180047.1 UniGene:At.52897 ProteinModelPortal:Q9SHV2
PaxDb:Q9SHV2 PRIDE:Q9SHV2 EnsemblPlants:AT2G24710.1 GeneID:817007
KEGG:ath:AT2G24710 TAIR:At2g24710 InParanoid:Q9SHV2 OMA:QASTICW
PhylomeDB:Q9SHV2 Genevestigator:Q9SHV2 GermOnline:AT2G24710
Uniprot:Q9SHV2
Length = 895
Score = 540 (195.1 bits), Expect = 2.7e-102, Sum P(3) = 2.7e-102
Identities = 129/390 (33%), Positives = 203/390 (52%)
Query: 255 KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDP 314
KLL+ +L F GL G+ F ++ P+ ++I+N++ + +GFW G G +
Sbjct: 357 KLLQTLLTVQFRGLAGEFRFFRGQLQPS-VFEIVNIINTGEKSIGFWKEGNGLVKKLDQQ 415
Query: 315 KYNCSSM---KD-LGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDEL 370
+ S++ KD L + WPG PKGW +P K + LRIGVP + + V V D +
Sbjct: 416 ASSISALSTWKDHLKHIVWPGEADSVPKGWQIPTKGKKLRIGVPKRTGYTDLVKVTRDPI 475
Query: 371 RNFTYFGGFSIELFKALVEKLPFYLPYNFIPFN-------GSYDDLVKQLYLNNFAGVVG 423
N T GF I+ F+A++ +LP+ + Y FIPF G+Y+DLV Q+YL + VVG
Sbjct: 476 TNSTVVTGFCIDFFEAVIRELPYDVSYEFIPFEKPDGKTAGNYNDLVYQVYLGRYDAVVG 535
Query: 424 DVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISIYN- 481
D I+ R Y DFT P+ +SG+ +I + + +LF+KP + +W L + IS +
Sbjct: 536 DTTILVNRSSYVDFTFPFIKSGVGLIVEMTDPVKRDYILFMKPLSWKLW-LTSFISFFLV 594
Query: 482 GFVVWLIERNHWPELTGSALHQTGTFFWLSFNLH----GEKLHSNLSRMTTLVWLFVALV 537
G VW++E P+ +G Q T W +F+ E++ S +R + W F+ LV
Sbjct: 595 GCTVWVLEYKRNPDFSGPPRFQASTICWFAFSTMVFAPRERVFSFWARALVIAWYFLVLV 654
Query: 538 ISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEV 597
++Q+YTA+L S+LT++ L PT+ ++ +L +GY R LK R G F +
Sbjct: 655 LTQSYTASLASLLTSQKLNPTITSMSSLLEKGETVGYQRT-SFILGKLKER--G--FPQS 709
Query: 598 AEAKIFLAKYCKGFTVAGPTYKVGGLGFAF 627
+ A+ C GP K GG+ AF
Sbjct: 710 SLVPFDTAEECDELLSKGP--KKGGVSGAF 737
Score = 382 (139.5 bits), Expect = 2.7e-102, Sum P(3) = 2.7e-102
Identities = 98/332 (29%), Positives = 181/332 (54%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ +++V+AILGP TS + + EI K ++P++S++ +P + R P+ L+A+
Sbjct: 88 LDLIKNKQVKAILGPWTSMQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYED 147
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIH--VLALPHFP 118
Q++ I AI++ + W +V +Y D ++ GI+P L+DAL++ I + V+A+ +
Sbjct: 148 SFQVQPIKAIIKLFGWREVVPVYID-NTFGEGIMPRLTDALQDINVRIPYRSVIAI-NAT 205
Query: 119 SSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSI 178
+S EL K+ RVF+VH+ +LA F KA ++ +ME Y+WI T+ + I
Sbjct: 206 DHEISVELLKMMNMPTRVFLVHMYYDLASRFFIKAKELGLMEPGYVWILTNGVIDDLSLI 265
Query: 179 NTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAV 238
N +++ +M+G+LG++++ P+ P + +FR R+ + +P E + YDA
Sbjct: 266 NETAVEAMEGVLGIKTYIPKS-PDLE----KFRSRWRSLFPRV----ELSVYGLWAYDAT 316
Query: 239 WSVALAMEQK-----------------SEK----LNQ---KLLRRILLSDFDGLTGKVEF 274
++A+A+E+ SE L+Q KLL+ +L F GL G+ F
Sbjct: 317 TALAVAIEEAGTNNMTFSKVVDTGRNVSELEALGLSQFGPKLLQTLLTVQFRGLAGEFRF 376
Query: 275 MNQKVAPAHTYQIINLMGKSYRELGFWTYGLG 306
++ P+ ++I+N++ + +GFW G G
Sbjct: 377 FRGQLQPS-VFEIVNIINTGEKSIGFWKEGNG 407
Score = 145 (56.1 bits), Expect = 2.7e-102, Sum P(3) = 2.7e-102
Identities = 39/111 (35%), Positives = 56/111 (50%)
Query: 586 KSRKTGAV---FLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALL 642
K K G V FLE+ ++FL ++C + + + V G GF FP GSPL+ V A+L
Sbjct: 726 KGPKKGGVSGAFLEIPYLRLFLGQFCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAIL 785
Query: 643 KVSESGKLRELETSMIASEK--CMEVNLHDDDDIS----SLSPSGFWVLFV 687
KV+ES K ELE + ++ C + + D + S L F LFV
Sbjct: 786 KVAESPKAMELERAWFKKKEQSCPDPITNPDPNPSFTSRQLDIDSFLFLFV 836
>TAIR|locus:2122128 [details] [associations]
symbol:GLUR2 "glutamate receptor 2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IMP] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IMP] [GO:0030007 "cellular potassium ion
homeostasis" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:AL022604
EMBL:AL161587 GO:GO:0071230 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 EMBL:AF159498 EMBL:AF159499 EMBL:AY059778
IPI:IPI00535851 PIR:T06128 RefSeq:NP_567981.1 RefSeq:NP_974686.1
UniGene:At.2283 ProteinModelPortal:Q93YT1 PRIDE:Q93YT1
EnsemblPlants:AT4G35290.1 EnsemblPlants:AT4G35290.2 GeneID:829682
KEGG:ath:AT4G35290 TAIR:At4g35290 InParanoid:Q93YT1 OMA:MIDELNI
PhylomeDB:Q93YT1 ProtClustDB:CLSN2689771 Genevestigator:Q93YT1
GermOnline:AT4G35290 Uniprot:Q93YT1
Length = 912
Score = 536 (193.7 bits), Expect = 5.6e-99, Sum P(3) = 5.6e-99
Identities = 119/346 (34%), Positives = 192/346 (55%)
Query: 255 KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDP 314
+ L I+ ++ G+TG+++F+ + +Y IIN++ +R++G+W+ G S II P
Sbjct: 369 QFLDYIVNTNMTGVTGQIQFLPDRSMIQPSYDIINVVDDGFRQIGYWSNHSGLS--IIPP 426
Query: 315 K--YN-----CSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEY 367
+ Y SS + L V WPG TP+GW P + LRIGVP + F+++V+
Sbjct: 427 ESLYKKLSNRSSSNQHLNNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVS--- 483
Query: 368 DELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF-----NGSYDDLVKQLYLNNFAGVV 422
L G++I++F+A V+ + + +P+ F+ F N ++++ V + + F VV
Sbjct: 484 -RLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVFDAVV 542
Query: 423 GDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNG 482
GD+AIV +R + DFT PY ESGLV++ PV K + FL+PFT +W + A + G
Sbjct: 543 GDIAIVTKRTRIVDFTQPYIESGLVVVAPVTKLNDTPWAFLRPFTPPMWAVTAAFFLIVG 602
Query: 483 FVVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVI 538
V+W++E E G Q T W SF+ H E S L R L+WLFV L+I
Sbjct: 603 SVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRENTVSTLGRAVLLIWLFVVLII 662
Query: 539 SQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASD 584
+ +YTA+LTS+LT + L + ++TL SS+ +G+ +G YA +
Sbjct: 663 TSSYTASLTSILTVQQLNSPIRGVDTLISSSGRVGFQ--VGSYAEN 706
Score = 319 (117.4 bits), Expect = 5.6e-99, Sum P(3) = 5.6e-99
Identities = 81/254 (31%), Positives = 134/254 (52%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+ M++ V AI+GPQTS ++ +A++ +P+LSF P+ + ++PF +Q + +
Sbjct: 88 LQFMETDAV-AIIGPQTSIMAHVLSHLANELSVPMLSFTALDPSLSALQFPFFVQTAPSD 146
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPH---F 117
L M+AIA ++ + W +V +Y D D+S GI L D L +I + LP
Sbjct: 147 LFLMRAIAEMISYYGWSEVIALYNDDDNSRNGITA-LGDELEGRRCKISYKAVLPLDVVI 205
Query: 118 PSSR-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVH 176
S R + EL K++G + RV +V+ + +FE+A K+ MMEK Y+WI T TSL+
Sbjct: 206 TSPREIINELVKIQGMESRVIIVNTFPKTGKKIFEEAQKLGMMEKGYVWIATTWLTSLLD 265
Query: 177 SIN---TSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQ 233
S+N + S++G+L +R H P K K +DF R+ K + +
Sbjct: 266 SVNPLPAKTAESLRGVLTLRIHTPNSKKK-KDFVARWNKL-------SNGTVGLNVYGLY 317
Query: 234 TYDAVWSVALAMEQ 247
YD VW +A A+++
Sbjct: 318 AYDTVWIIARAVKR 331
Score = 182 (69.1 bits), Expect = 5.6e-99, Sum P(3) = 5.6e-99
Identities = 40/125 (32%), Positives = 69/125 (55%)
Query: 580 DYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIE 639
+YA+ L++ A+ E +FL+++C GF + G + G GFAFP+ SPL +
Sbjct: 727 EYAAALQNGTVAAIVDERPYVDLFLSEFC-GFAIRGQEFTRSGWGFAFPRDSPLAIDMST 785
Query: 640 ALLKVSESGKLRELETSMIASEKCMEVNLH-DDDDISSLSPSGFWVLFVLSGGISTIALV 698
A+L +SE+G+L+++ ++ C +N D+D L FW LF++ G IAL
Sbjct: 786 AILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFIALF 845
Query: 699 IFLWR 703
I+ ++
Sbjct: 846 IYFFK 850
>TAIR|locus:2081805 [details] [associations]
symbol:GLR3.6 "glutamate receptor 3.6" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230
EMBL:AL133452 GO:GO:0004965 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:BT004264 IPI:IPI00517161
PIR:T45779 RefSeq:NP_190716.3 UniGene:At.35384
ProteinModelPortal:Q84W41 EnsemblPlants:AT3G51480.1 GeneID:824311
KEGG:ath:AT3G51480 TAIR:At3g51480 InParanoid:Q84W41 OMA:FTKNGWG
PhylomeDB:Q84W41 ProtClustDB:CLSN2918557 Genevestigator:Q84W41
GermOnline:AT3G51480 Uniprot:Q84W41
Length = 903
Score = 549 (198.3 bits), Expect = 8.2e-98, Sum P(3) = 8.2e-98
Identities = 123/340 (36%), Positives = 187/340 (55%)
Query: 257 LRRILLSDFDGLTGKVEFMNQK--VAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDP 314
L IL D GLTG+++F + + V PA + ++N++G Y +G+W G S D
Sbjct: 365 LESILQVDRIGLTGRMKFTSDRNLVNPA--FDVLNVIGTGYTTIGYWFNHSGLSVMPADE 422
Query: 315 KYNCS-SMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNF 373
N S S + L V WPG P+GW + LRIGVP F++ V+V+ + +
Sbjct: 423 MENTSFSGQKLHSVVWPGHSIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVSVKSNGM--I 480
Query: 374 TYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD-----DLVKQLYLNNFAGVVGDVAIV 428
T GF +++F A + LP+ +P+ + F +D +LV+ + + VGD+ I+
Sbjct: 481 T---GFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSELVRLITTGVYDAGVGDITII 537
Query: 429 ARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLI 488
R + ADFT PY ESGLV++ PV+K G+ + FL+PFT +W++ A + G V+W +
Sbjct: 538 TERTKMADFTQPYVESGLVVVAPVRKLGSSAMAFLRPFTPQMWLIAAASFLIVGAVIWCL 597
Query: 489 ERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVISQTYTA 544
E H E G Q T FW SF+ H E SNL R+ ++WLFV L+I+ +YTA
Sbjct: 598 EHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRETTTSNLGRIVLIIWLFVVLIINSSYTA 657
Query: 545 NLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASD 584
+LTS+LT L + IETLQ+++ IGY + G + D
Sbjct: 658 SLTSILTVHQLSSPIKGIETLQTNHDPIGYPQ--GSFVRD 695
Score = 326 (119.8 bits), Expect = 8.2e-98, Sum P(3) = 8.2e-98
Identities = 85/272 (31%), Positives = 140/272 (51%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+ M+S+ V AI+GPQ S VA +A++ +IP+LSF+ P + ++PF ++ SQN
Sbjct: 88 LQFMESETV-AIIGPQRSTTARVVAHVATELKIPILSFSATDPTMSPLQFPFFIRTSQND 146
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPS- 119
L QM AIA IVQ + W +V IY D D G+ L D L E I + ALP P+
Sbjct: 147 LFQMAAIADIVQFYGWREVVAIYGDDDYGRNGVAA-LGDRLSEKRCRISYKAALPPAPTR 205
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHS-- 177
+++ L K+ + R+ VVH S + LF A + MM Y+WI T+ ++++ +
Sbjct: 206 ENITDLLIKVALSESRIIVVHASFIWGLELFNVARNLGMMSTGYVWIATNWLSTIIDTDS 265
Query: 178 -INTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYD 236
+ +I+++QG++ +R H P K Q+F +R+ A+ YD
Sbjct: 266 PLPLDTINNIQGVITLRLHTPNSIMK-QNFVQRWHNLTHVGL---------STYALYAYD 315
Query: 237 AVWSVALAMEQKSEKL-NQKLLRRILLSDFDG 267
VW +A A++ +K N + ++S+ G
Sbjct: 316 TVWLLAQAIDDFFKKGGNVSFSKNPIISELGG 347
Score = 149 (57.5 bits), Expect = 8.2e-98, Sum P(3) = 8.2e-98
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
AV E A ++FL+ C+ F + G + G GFAFP+ SPL V A+L++SE+G ++
Sbjct: 732 AVVDERAYIELFLSNRCE-FGIVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQ 790
Query: 652 ELETSMIASEKCMEVNLHDDD-DISSLSPSGFWVLFVLSGGISTIALVIF 700
+ + + C +L + ++ L FW LFV+ G +AL ++
Sbjct: 791 RIRDKWLLRKAC---SLQGAEIEVDRLELKSFWGLFVVCGVACVLALAVY 837
Score = 38 (18.4 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 603 FLAKYCK-GFTVAGPTYKVGGLGFAFPKGSPLLPSV 637
F Y + G V P K+G AF + P P +
Sbjct: 546 FTQPYVESGLVVVAPVRKLGSSAMAFLR--PFTPQM 579
Score = 37 (18.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 428 VARRCQYADFTHPYTESGLVMIFP 451
++ RC++ +T++G FP
Sbjct: 744 LSNRCEFGIVGQEFTKNGWGFAFP 767
>TAIR|locus:2207165 [details] [associations]
symbol:GLR3.4 "AT1G05200" species:3702 "Arabidopsis
thaliana" [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0019722
"calcium-mediated signaling" evidence=IDA] [GO:0070417 "cellular
response to cold" evidence=IEP] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEP] [GO:0071311
"cellular response to acetate" evidence=IEP] [GO:0005262 "calcium
channel activity" evidence=IMP] [GO:0006816 "calcium ion transport"
evidence=IDA;IMP] [GO:0008066 "glutamate receptor activity"
evidence=IMP] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 GO:GO:0009611
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0015276 GO:GO:0071260 GO:GO:0070417 InterPro:IPR001828
GO:GO:0071230 EMBL:AC000098 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 TCDB:1.A.10.1.10
EMBL:AY072070 EMBL:AK118206 EMBL:AF167355 IPI:IPI00517695
IPI:IPI00538965 PIR:D86186 PIR:T51135 RefSeq:NP_001030971.1
RefSeq:NP_172012.2 UniGene:At.10412 UniGene:At.66937
ProteinModelPortal:Q8GXJ4 PRIDE:Q8GXJ4 EnsemblPlants:AT1G05200.1
EnsemblPlants:AT1G05200.2 GeneID:839268 KEGG:ath:AT1G05200
GeneFarm:2532 TAIR:At1g05200 InParanoid:Q8GXJ4 OMA:WHLDEND
PhylomeDB:Q8GXJ4 ProtClustDB:CLSN2690705 Genevestigator:Q8GXJ4
GermOnline:AT1G05200 GO:GO:0071311 Uniprot:Q8GXJ4
Length = 959
Score = 533 (192.7 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 128/380 (33%), Positives = 204/380 (53%)
Query: 210 FRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLT 269
FR+ + + N H+ +Q AL++ + EK ++ IL + G+T
Sbjct: 360 FRENNNITFSNDPNLHKTNGSTIQLS------ALSVFNEGEKF----MKIILGMNHTGVT 409
Query: 270 GKVEFMNQK--VAPAHTYQIINLMGKSYRELGFWTYGLGFS----DTIIDPKYNCSSMKD 323
G ++F + + V PA Y+++NL G + R +G+W+ G S +T+ N S+
Sbjct: 410 GPIQFDSDRNRVNPA--YEVLNLEGTAPRTVGYWSNHSGLSVVHPETLYSRPPNTSTANQ 467
Query: 324 -LGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIE 382
L + +PG P+GW P +PLRIGVP + YV+ + +N G+ I+
Sbjct: 468 RLKGIIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKD----KNPPGVRGYCID 523
Query: 383 LFKALVEKLPFYLPYNFIPF-----NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADF 437
+F+A +E LP+ +P +I + N SYD+LV ++ +NF VGD+ IV R +Y DF
Sbjct: 524 VFEAAIELLPYPVPRTYILYGDGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTRYVDF 583
Query: 438 THPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIERNHWPELT 497
T P+ ESGLV++ PV+++ + FLKPFT +W + ++ G +VW++E E
Sbjct: 584 TQPFIESGLVVVAPVKEAKSSPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFR 643
Query: 498 GSALHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTAR 553
G Q T FW SF+ H E S+L R ++WLFV L+I+ +YTA+LTS+LT R
Sbjct: 644 GPPRRQLITIFWFSFSTMFFSHRENTVSSLGRFVLIIWLFVVLIINSSYTASLTSILTIR 703
Query: 554 GLEPTVNNIETLQSSNAIIG 573
L + I++L +SN IG
Sbjct: 704 QLTSRIEGIDSLVTSNEPIG 723
Score = 281 (104.0 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 75/251 (29%), Positives = 132/251 (52%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+ LM++ KV A +GPQ+S ++ +A++ +P+LSF P ++ ++P+ L+ +QN
Sbjct: 119 LQLMEN-KVVAAIGPQSSGIAHMISYVANELHVPLLSFGATDPTLSSLQFPYFLRTTQND 177
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL-PHFPS 119
QM AIA + W QV I+ D + GI L D L + + I + A+ P S
Sbjct: 178 YFQMHAIADFLSYSGWRQVIAIFVDDECGRNGISV-LGDVLAKKRSRISYKAAITPGADS 236
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD----AFTSLV 175
S + + L + + RVFVVH++ + +++F A + MM Y+WI TD A S+
Sbjct: 237 SSIRDLLVSVNLMESRVFVVHVNPDSGLNVFSVAKSLGMMASGYVWIATDWLPTAMDSME 296
Query: 176 HSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTY 235
H +++ ++ +QG++ R + E K ++F R+ P + N + A+ Y
Sbjct: 297 H-VDSDTMDLLQGVVAFRHYTIESSVK-----RQFMARWKNLRPNDGFN----SYAMYAY 346
Query: 236 DAVWSVALAME 246
D+VW VA A++
Sbjct: 347 DSVWLVARALD 357
Score = 151 (58.2 bits), Expect = 4.3e-91, Sum P(3) = 4.3e-91
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 592 AVFLEVAEAKIFLAKY-CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
A+ E+ ++ L CK F G + G GFAF + SPL + A+L++SE G+L
Sbjct: 769 AIVDELPYIEVLLTNSNCK-FRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGEL 827
Query: 651 RELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFLWRCNWK 707
++ + + + + + +D S LS FW LF++ G +AL +F WR W+
Sbjct: 828 EKIHRKWLNYKHECSMQISNSED-SQLSLKSFWGLFLICGITCFMALTVFFWRVFWQ 883
>TAIR|locus:2206095 [details] [associations]
symbol:GLR3.3 "glutamate receptor 3.3" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005262 "calcium channel activity"
evidence=IMP] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0008066 "glutamate receptor activity" evidence=IMP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IMP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 GO:GO:0009630
InterPro:IPR001828 GO:GO:0071230 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AC025815
IPI:IPI00548873 PIR:C96495 RefSeq:NP_174978.1 UniGene:At.39090
ProteinModelPortal:Q9C8E7 TCDB:1.A.10.1.10 PaxDb:Q9C8E7
PRIDE:Q9C8E7 EnsemblPlants:AT1G42540.1 GeneID:840859
KEGG:ath:AT1G42540 TAIR:At1g42540 InParanoid:Q9C8E7 OMA:FTCERRV
PhylomeDB:Q9C8E7 ProtClustDB:CLSN2914596 ArrayExpress:Q9C8E7
Genevestigator:Q9C8E7 Uniprot:Q9C8E7
Length = 933
Score = 560 (202.2 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 124/344 (36%), Positives = 187/344 (54%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
+ LL+ IL + GLTG+++F + Y IIN+ G R++G+W+ G S + +
Sbjct: 366 EALLKDILGTRMVGLTGQLQFTPDRSRTRPAYDIINVAGTGVRQIGYWSNHSGLSTVLPE 425
Query: 314 PKY-----NCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYD 368
Y N S+ L V WPG + P+GW + L+IGVP+ ++++V+
Sbjct: 426 LLYTKEKPNMSTSPKLKHVIWPGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFVS---- 481
Query: 369 ELRNF-TYFGGFSIELFKALVEKLPFYLPYNFIPF-NG----SYDDLVKQLYLNNFAGVV 422
++R F GF I++F A V LP+ +P FIP+ NG SY +V+ + NF GVV
Sbjct: 482 QIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEMITTGNFDGVV 541
Query: 423 GDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNG 482
GDVAIV R + DFT PY SGLV++ P +K + FL+PF R +W + ++ G
Sbjct: 542 GDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVG 601
Query: 483 FVVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVI 538
VVW++E E G Q T W SF+ H E S L R+ ++WLFV L+I
Sbjct: 602 IVVWILEHRTNDEFRGPPKRQCVTILWFSFSTMFFAHRENTVSTLGRLVLIIWLFVVLII 661
Query: 539 SQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYA 582
+ +YTA+LTS+LT + L + IE+L+ + IGY +G +A
Sbjct: 662 NSSYTASLTSILTVQQLSSPIKGIESLRERDDPIGYQ--VGSFA 703
Score = 261 (96.9 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 66/216 (30%), Positives = 118/216 (54%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
+ I+GPQ S ++ +A++ ++P+LSFA P + ++P+ ++ +Q+ L QM AIA
Sbjct: 94 IVGIIGPQCSVVAHMISHMANELRVPLLSFAVTDPVMSPLQFPYFIRTTQSDLYQMDAIA 153
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--- 125
+IV + W +V ++ D D G+ L+D L I + L H P + +++
Sbjct: 154 SIVDFYGWKEVIAVFVDDDFGRNGVAA-LNDKLASRRLRITYKAGL-H-PDTAVNKNEIM 210
Query: 126 --LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHS---INT 180
L K+ Q R+ V+H+ EL +F++A + MM Y+WI TD ++ + S +
Sbjct: 211 NMLIKIMLLQPRIVVIHVYSELGFAVFKEAKYLGMMGNGYVWIATDWLSTNLDSSSPLPA 270
Query: 181 SSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGA 216
+ ++QG+L +R H P+ K ++F KR+RK GA
Sbjct: 271 ERLETIQGVLVLRPHTPDSDFK-REFFKRWRKMSGA 305
Score = 138 (53.6 bits), Expect = 7.3e-91, Sum P(3) = 7.3e-91
Identities = 37/124 (29%), Positives = 60/124 (48%)
Query: 581 YASDLKSRKT-GAVFLEVAE---AKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPS 636
YA LK + G V V E ++FL+ C + + G + G GFAFP+ SPL
Sbjct: 727 YAKALKDGPSKGGVAAIVDERPYVELFLSSNC-AYRIVGQEFTKSGWGFAFPRDSPLAID 785
Query: 637 VIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
+ A+L+++E+G L+ + + C N + D L FW LF++ G +A
Sbjct: 786 LSTAILELAENGDLQRIHDKWLMKNACTLENAELESD--RLHLKSFWGLFLICGVACLLA 843
Query: 697 LVIF 700
L ++
Sbjct: 844 LFLY 847
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 501 LHQTGTFFWLSFNLHG--EKLHSNLSRMTTLVWLF 533
+ Q TFF+LSF G + HS ++ + +F
Sbjct: 1 MKQLWTFFFLSFLCSGLFRRTHSEKPKVVKIGSIF 35
Score = 38 (18.4 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 333 PWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNV 365
P TP+ + KD P + GV + + YV +
Sbjct: 720 PLGTPEAYAKALKDGPSKGGVAAIVDERPYVEL 752
>TAIR|locus:2181196 [details] [associations]
symbol:GLR2.1 "glutamate receptor 2.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AF007271 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AK228008 IPI:IPI00532199 PIR:T01809 RefSeq:NP_198062.2
UniGene:At.30826 ProteinModelPortal:O04660 IntAct:O04660
PaxDb:O04660 EnsemblPlants:AT5G27100.1 GeneID:832768
KEGG:ath:AT5G27100 TAIR:At5g27100 eggNOG:NOG323745
InParanoid:O04660 OMA:GWREVAP PhylomeDB:O04660
ProtClustDB:CLSN2683132 Genevestigator:O04660 GermOnline:AT5G27100
Uniprot:O04660
Length = 901
Score = 622 (224.0 bits), Expect = 4.5e-79, Sum P(2) = 4.5e-79
Identities = 129/332 (38%), Positives = 201/332 (60%)
Query: 255 KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWT--YGLGFSDTII 312
KLL+ + F GL G +F+N ++ P+ ++I+N+ G+ R +GFW YGL F +
Sbjct: 357 KLLQTLSRVRFQGLAGDFQFINGELQPS-VFEIVNVNGQGGRTIGFWMKEYGL-FKNVDQ 414
Query: 313 DP--KYNCSSMKD-LGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDE 369
P K SS +D L + WPG PKGW +P + L+IGVP+ + FQQ+V D
Sbjct: 415 KPASKTTFSSWQDRLRPIIWPGDTTSVPKGWEIPTNGKRLQIGVPVNNTFQQFVKATRDP 474
Query: 370 LRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF-NGSYDDLVKQLYLNNFAGVVGDVAIV 428
+ N T F GFSI+ F+A+++ +P+ + Y+FIPF +G YD LV Q+YL + VV D I
Sbjct: 475 ITNSTIFSGFSIDYFEAVIQAIPYDISYDFIPFQDGGYDALVYQVYLGKYDAVVADTTIS 534
Query: 429 ARRCQYADFTHPYTESGLVMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISIYN-GFVVW 486
+ R Y DF+ PYT SG+ ++ PV+ S ++ +FL P T A+W L++++S + G VVW
Sbjct: 535 SNRSMYVDFSLPYTPSGVGLVVPVKDSVRRSSTIFLMPLTLALW-LISLLSFFIIGLVVW 593
Query: 487 LIERNHWPELTGSALHQTGTFFWLSFNLH----GEKLHSNLSRMTTLVWLFVALVISQTY 542
++E P+ G +Q T FW SF++ E++ S +R+ ++W F+ LV++Q+Y
Sbjct: 594 VLEHRVNPDFDGPGQYQLSTIFWFSFSIMVFAPRERVLSFWARVVVIIWYFLVLVLTQSY 653
Query: 543 TANLTSMLTARGLEPTVNNIETLQSSNAIIGY 574
TA+L S+LT + L PTV NI +L + +GY
Sbjct: 654 TASLASLLTTQHLHPTVTNINSLLAKGESVGY 685
Score = 413 (150.4 bits), Expect = 3.9e-51, Sum P(2) = 3.9e-51
Identities = 110/351 (31%), Positives = 190/351 (54%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ +++V+AILGP TS + + E+ K Q+P+++++ +P+ A+ R + +A+ +
Sbjct: 89 LDLITNKEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDD 148
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL-PHFPS 119
+Q+ AI I++ + W +V +Y D D+ GI+P L+D L+E I + + P+
Sbjct: 149 SSQVHAIKEIIKLFGWREVAPVYVD-DTFGEGIMPRLTDVLQEINVRIPYRTVISPNATD 207
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
+S EL ++ RVFVVHL LA F KA ++ +M++ Y+WI T+ T ++ +N
Sbjct: 208 DEISVELLRMMTLPTRVFVVHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMN 267
Query: 180 TSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
+ I +MQG+LGV+++ P K + ++F R+ KRF P D N + YDA
Sbjct: 268 ETEIETMQGVLGVKTYVPRSK-ELENFRSRWTKRF----PISDLN----VYGLWAYDATT 318
Query: 240 SVALAMEQK----------------SE-------KLNQKLLRRILLSDFDGLTGKVEFMN 276
++ALA+E+ SE + KLL+ + F GL G +F+N
Sbjct: 319 ALALAIEEAGTSNLTFVKMDAKRNVSELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQFIN 378
Query: 277 QKVAPAHTYQIINLMGKSYRELGFWT--YGLGFSDTIIDP--KYNCSSMKD 323
++ P+ ++I+N+ G+ R +GFW YGL F + P K SS +D
Sbjct: 379 GELQPS-VFEIVNVNGQGGRTIGFWMKEYGL-FKNVDQKPASKTTFSSWQD 427
Score = 196 (74.1 bits), Expect = 4.5e-79, Sum P(2) = 4.5e-79
Identities = 44/118 (37%), Positives = 67/118 (56%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
AV +EV +IFL +YC + + +KV GLGF FP GSPL+ + A+LKV ES K
Sbjct: 728 AVLMEVPYVRIFLGQYCNKYKMVQTPFKVDGLGFVFPIGSPLVADISRAILKVEESNKAN 787
Query: 652 ELETSMIA--SEKCMEVNLHDDDDIS----SLSPSGFWVLFVLSGGISTIALVIFLWR 703
+LE + E C + + D + S L FWVLF+++ + T+AL+ F+++
Sbjct: 788 QLENAWFKPIDESCPDPLTNPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMALLKFVYQ 845
>TAIR|locus:2166001 [details] [associations]
symbol:ATGLR1.2 species:3702 "Arabidopsis thaliana"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005217
"intracellular ligand-gated ion channel activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0016036
"cellular response to phosphate starvation" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042631
"cellular response to water deprivation" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072064 EMBL:AY072065
IPI:IPI00536526 IPI:IPI00547562 RefSeq:NP_199651.1
RefSeq:NP_851155.1 UniGene:At.29852 ProteinModelPortal:Q9LV72
IntAct:Q9LV72 PRIDE:Q9LV72 EnsemblPlants:AT5G48400.2 GeneID:834895
KEGG:ath:AT5G48400 TAIR:At5g48400 eggNOG:NOG313824
InParanoid:Q9LV72 OMA:FNANEDY PhylomeDB:Q9LV72
Genevestigator:Q9LV72 GermOnline:AT5G48400 Uniprot:Q9LV72
Length = 867
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 226/745 (30%), Positives = 359/745 (48%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ ++ V+AI+G + E +AE+ K ++PV+S ++ + + ++ L+QA+ N
Sbjct: 97 VDLLQTEGVQAIIGGNSLLEAKLLAELGEKARVPVISL-NSPMSLSLSKYTHLIQATHNS 155
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+++K I A + ++W+ V ++ ED D + + D E + +A S
Sbjct: 156 ASEVKGITAFLHGFDWNSVALVLEDHDDWRES-MHFMVDHFHENNVHVQSKVAFSVTSSE 214
Query: 121 -RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHS-- 177
L + L +LK VFVVHLS +A LF A K+ MM + + WI T S H
Sbjct: 215 DSLMDRLRELKDLGTTVFVVHLSEVIATRLFPCAEKLGMMGEGFAWILTSRSMSSFHDQF 274
Query: 178 INTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDA 237
I+ + +M+G++G +S+ P K + +F R+RK E V +D
Sbjct: 275 IDDLTKEAMEGVVGFKSYIPMSK-ELHNFTLRWRKTLPVEEVTGSEITRLSISGVWAHDV 333
Query: 238 VWSVALAME-QKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYR 296
WS+A A E + + LL I S F GL+G + + K+ + ++I+N++G R
Sbjct: 334 AWSLASAAEVTRMPTVTSTLLEAIKESRFKGLSGNFQLDDMKLL-SDKFEIVNMIGSGER 392
Query: 297 ELGFWTYGLGFSDTIIDPKYNCSSMKD-LGQVFWPGAPWYTPKGWTLPAKDQP-LRIGVP 354
+GFW FS+ + SS D L + WPG +PKG +L + LR+ V
Sbjct: 393 RVGFWNSNGSFSN-----RRQLSSTHDNLETIIWPGGSAQSPKGRSLRESGRKKLRVLVT 447
Query: 355 IGSEFQQYVNVEYDELRN-FTYFGGFSIELFKALVEKLPFYLPYNFIPF-NGS-YDDLVK 411
+ F + + VE D + + T GF IE+F+A + PF +I + NG+ Y L
Sbjct: 448 SSNRFPRLMKVETDPITHEITIVEGFCIEVFQASIA--PFNYEVEYIRWLNGTNYTKLAY 505
Query: 412 QLYL--NNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRA 469
L+ + + VGD+ I + R Y DFT PYTE GL ++ ++S +F +P T
Sbjct: 506 ALHSQKDKYDAAVGDITITSDRSMYVDFTLPYTEMGLGIVAAKERS---MWVFFQPLTPN 562
Query: 470 VWILVAVISIYNGFVVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSR 525
+WI A + G +VWLIER E GS Q G W F+ H EKL NLSR
Sbjct: 563 LWITSAAFFVLTGIIVWLIERAENKEFQGSWPQQIGVVIWFGFSTLVYAHREKLQHNLSR 622
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNN--IETLQSS---NAIIGYS----- 575
VW+F L++ +YTA LTSM+T + + N + L S NA + S
Sbjct: 623 FVVTVWVFAVLILVTSYTATLTSMMTVQQIRFNANEDYVGHLSGSLIANAALTNSSLRAM 682
Query: 576 RCLG-----DYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKG 630
R LG DYA L ++ + E+ KI L + F + G GF F KG
Sbjct: 683 RLLGLNTSEDYAQALMNKSVSYIVSELPYLKILLGENPGHFLMVKTQSTTNGFGFMFQKG 742
Query: 631 SPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSG 690
S L P+V + K+ S +L E+E +K ++ DD + ++ F LF+++G
Sbjct: 743 SELAPNVSREIAKLRTSERLNEMERRWF--DK--QLPYTTDDTSNPITLYRFRGLFMITG 798
Query: 691 GIS---TIALVIFLW-RCNWKINEN 711
+S +A+++ LW R W+I N
Sbjct: 799 -VSFAFALAVLLILWLRERWEILVN 822
>TAIR|locus:2166006 [details] [associations]
symbol:GLR1.3 "glutamate receptor 1.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 ProtClustDB:CLSN2684267
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AY091121 EMBL:AY142599 IPI:IPI00522082 RefSeq:NP_199652.1
UniGene:At.66754 UniGene:At.70447 ProteinModelPortal:Q9FH75
PRIDE:Q9FH75 EnsemblPlants:AT5G48410.1 GeneID:834896
KEGG:ath:AT5G48410 TAIR:At5g48410 eggNOG:NOG270167
InParanoid:Q9FH75 OMA:FRASISP PhylomeDB:Q9FH75
Genevestigator:Q9FH75 GermOnline:AT5G48410 Uniprot:Q9FH75
Length = 860
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 223/750 (29%), Positives = 371/750 (49%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
+DL+ ++ VEAI+G + E + E+ K ++P++S D+ + + ++ L+QA+ +
Sbjct: 99 VDLLKTEGVEAIIGGNSLLEAKLLGELGEKARVPMISL-DSPFSLSLSKYTHLIQATHDS 157
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
++ K I + + ++W+ V ++YED D + L + E G + + S
Sbjct: 158 TSEAKGITSFINVFDWNSVALVYEDHDDWRES-MQLLVEHFHENGVRVQSKVGFTVSSSE 216
Query: 121 R-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI-TTDAFTSLVHSI 178
+ L++LK VFVVHLS +A HLF A ++ +M ++WI T S +I
Sbjct: 217 DFVMGRLQQLKDLGTTVFVVHLSEVIATHLFPCARRLGLMGDGFVWILTAKTMNSFHENI 276
Query: 179 NTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAV 238
+ + +M+G++G +S+ P + Q+F R+RK E E G A +D
Sbjct: 277 DDFTKQAMEGVVGFKSYIPMSI-ELQNFTLRWRKSLPVEEAELTRLSISGIWA---HDIA 332
Query: 239 WSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRE 297
+++A A E + + LL I + F+GL+G + +N K ++ ++IIN++G S R
Sbjct: 333 FALARAAEVIRMPNVTSTLLEEITKTRFNGLSGDFQ-LNDKKLLSNKFEIINMIGSSERR 391
Query: 298 LGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQP-LRIGVPIG 356
+GF FS+ ++ S+ L + WPG +PKG +L D+ LR+ V
Sbjct: 392 VGFLNSNGSFSNR----RHLSSTHNKLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSS 447
Query: 357 SEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF-NGS-YDDLVKQLY 414
+ F + + VE D + N GF IE+F+A + PF +IP+ NGS YD+L L+
Sbjct: 448 NRFPRLMKVETDPVTNELIVEGFCIEVFRASIS--PFNYEVEYIPWLNGSNYDNLAYALH 505
Query: 415 L--NNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWI 472
+ + VGD+ I + R Y DFT P+TE GL ++ ++S +F +P T +WI
Sbjct: 506 SQKDKYDAAVGDITITSNRSTYVDFTLPFTEMGLGIVAVKERS---MWVFFQPLTPDLWI 562
Query: 473 LVAVISIYNGFVVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSRMTT 528
A + G +VWLIER E GS Q G W F+ H EKL NLSR
Sbjct: 563 TSAFFFVLTGVIVWLIERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLSRFVV 622
Query: 529 LVWLFVALVISQTYTANLTSMLTARGL-----EPTVNNIE-TLQSSNAIIGYS----RCL 578
VW+F L+++ +YTA LTSM+T + + E V ++ +L ++ A+ S R L
Sbjct: 623 TVWVFAVLILTASYTATLTSMMTVQQIRFNSNEDYVGHLSGSLIANVALTSSSLRAMRSL 682
Query: 579 G-----DYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPL 633
G DYA L ++ V E+ K+ L + F + G GF F KG L
Sbjct: 683 GLNSAADYAQALLNKTVSFVVDELPYLKVVLGENPTHFFMVKTQSTTNGFGFMFQKGFEL 742
Query: 634 LPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSG--- 690
+P+V + K+ S KL E+E ++ + DD + ++ F LF++ G
Sbjct: 743 VPNVSREISKLRTSEKLNEMEKRWFDNQ----LPYTTDDTSNPITLYRFRGLFIIIGVSF 798
Query: 691 GISTIALVIFLWRCNWKIN-ENLLVNKKIR 719
+ LVI R W+I +NL +++++R
Sbjct: 799 AFALAVLVILCLRDKWEILVDNLDLSQRLR 828
>TAIR|locus:2062586 [details] [associations]
symbol:GLR5 "glutamate receptor 5" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC005700 GO:GO:0004965
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AF210701
IPI:IPI00548986 PIR:F84732 PIR:T51136 RefSeq:NP_565744.1
UniGene:At.13201 ProteinModelPortal:Q9SDQ4 SMR:Q9SDQ4 IntAct:Q9SDQ4
PaxDb:Q9SDQ4 PRIDE:Q9SDQ4 EnsemblPlants:AT2G32400.1 GeneID:817801
KEGG:ath:AT2G32400 GeneFarm:2534 TAIR:At2g32400 eggNOG:NOG282132
InParanoid:Q9SDQ4 OMA:NSSHRIQ PhylomeDB:Q9SDQ4
ProtClustDB:CLSN2688630 Genevestigator:Q9SDQ4 GermOnline:AT2G32400
Uniprot:Q9SDQ4
Length = 921
Score = 476 (172.6 bits), Expect = 3.3e-76, Sum P(3) = 3.3e-76
Identities = 111/335 (33%), Positives = 177/335 (52%)
Query: 256 LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPK 315
LL ++L +F G+ G+V+F + + Y+IIN+ +GFW+ GFS ++ PK
Sbjct: 361 LLEKLLKVNFTGIAGQVQFGSGRNVIGCDYEIINVNKTDVHTVGFWSKNGGFS--VVAPK 418
Query: 316 YNCSSMKD-------LGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEYD 368
S K LG + WPG P+GW + PL+I VP F ++V E +
Sbjct: 419 TRHSQKKTSFVSDEKLGDITWPGGGREKPRGWVIADSADPLKIVVPRRVSFVEFVTEEKN 478
Query: 369 ELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF-NG----SYDDLVKQLYLNNFAGVVG 423
GF I++F ++ +P+ +PY F PF NG +Y+ L++ + + VG
Sbjct: 479 SSHRIQ---GFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNYNHLIQMVTDGVYDAAVG 535
Query: 424 DVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGF 483
D+AIV R + DF+ PY +GLV++ P N T +FL+PFT +W +V V +
Sbjct: 536 DIAIVPSRSKLVDFSQPYASTGLVVVIPANDD-NATWIFLRPFTSRLWCVVLVSFLVIAV 594
Query: 484 VVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHSNLSRMTTLVWLFVALVIS 539
V+W++E + G Q T SF+ + E SNL+R+ +VWLF+ +V++
Sbjct: 595 VIWILEHRINEDFRGPPRRQLSTMLLFSFSTLFKRNQEDTISNLARLVMIVWLFLLMVLT 654
Query: 540 QTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGY 574
+YTANLTS+LT + L + I++L++S IGY
Sbjct: 655 ASYTANLTSILTVQQLPSAITGIDSLRASEVPIGY 689
Score = 284 (105.0 bits), Expect = 3.3e-76, Sum P(3) = 3.3e-76
Identities = 67/255 (26%), Positives = 131/255 (51%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQL 61
+L++ + V A++GP +S ++++IA P++SFA P + ++PF L+ + N
Sbjct: 90 ELLEKEVV-AMIGPISSSVAHTISDIAKGLHFPLVSFAATDPTLSALQFPFFLRTTPNDA 148
Query: 62 AQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP-HFPSS 120
QM A+ ++ + W +V +Y D + G+ L D L + + I + + L H
Sbjct: 149 HQMSALVDLINFYGWKEVISVYSDDELGRNGVSA-LDDELYKKRSRISYKVPLSVHSDEK 207
Query: 121 RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT 180
L+ L K K RV+++H + + +F+ A K++MM +Y+W+ TD + + S++
Sbjct: 208 FLTNALNKSKSIGPRVYILHFGPDPLLRIFDIAQKLQMMTHEYVWLATDWLSVTLDSLSD 267
Query: 181 S-SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
++ ++G++G+R H PE K + F + + +N A A+ YD VW
Sbjct: 268 KGTLKRLEGVVGLRQHIPESV-KMEHFTHKLQ-----------SNRSMNAYALHAYDTVW 315
Query: 240 SVALAMEQK-SEKLN 253
+A +E+ +E +N
Sbjct: 316 MIAHGIEELLNEGIN 330
Score = 118 (46.6 bits), Expect = 3.3e-76, Sum P(3) = 3.3e-76
Identities = 32/112 (28%), Positives = 58/112 (51%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ E+ ++FLA+ GF + G + G GFAF + SPL + A+LK+SE+ KL+
Sbjct: 735 AIVDELPYIELFLAERT-GFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQ 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFLWR 703
E+ + C + + + + L F L+++ I+ A ++F+ R
Sbjct: 794 EIRKKWLCKTNCAGKSNWNPEP-NQLHLKSFKGLYLVCIAITVSAFLVFVLR 844
Score = 42 (19.8 bits), Expect = 4.1e-28, Sum P(3) = 4.1e-28
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 400 IPFNGSYDDLVKQLYLNNFAGVVGDVAIVARR----CQY 434
I F S + L+++L NF G+ G V + R C Y
Sbjct: 352 IKFFNSGELLLEKLLKVNFTGIAGQVQFGSGRNVIGCDY 390
>TAIR|locus:2102975 [details] [associations]
symbol:GLR1.1 "glutamate receptor 1.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0005261
"cation channel activity" evidence=IDA] [GO:0005262 "calcium
channel activity" evidence=IDA] [GO:0005267 "potassium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IDA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA;IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009738
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0005267 GO:GO:0005272 InterPro:IPR001828 EMBL:AC016829
GO:GO:0071230 GO:GO:0030003 GO:GO:0005234 EMBL:AF079998
EMBL:AK117584 IPI:IPI00529222 PIR:T51138 RefSeq:NP_187061.1
UniGene:At.18800 ProteinModelPortal:Q9M8W7 STRING:Q9M8W7
TCDB:1.A.10.1.7 EnsemblPlants:AT3G04110.1 GeneID:819566
KEGG:ath:AT3G04110 GeneFarm:2528 TAIR:At3g04110 eggNOG:NOG253648
HOGENOM:HOG000239558 InParanoid:Q9M8W7 KO:K05387 OMA:IRFSENE
PhylomeDB:Q9M8W7 ProtClustDB:CLSN2684267 Genevestigator:Q9M8W7
GermOnline:AT3G04110 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 Uniprot:Q9M8W7
Length = 808
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 208/741 (28%), Positives = 342/741 (46%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
DL+ + K EAI+G Q+ +E +A I+ K ++PV+S PN + +++ +Q + +
Sbjct: 88 DLLKNAKAEAIVGAQSLQEAKLLATISEKAKVPVIS--TFLPNTLSLKKYDNFIQWTHDT 145
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHV--LALPHFP 118
++ K I +++Q + V VIYED D + L L + ++ G I A+
Sbjct: 146 TSEAKGITSLIQDFSCKSVVVIYEDADDWSES-LQILVENFQDKGIYIARSASFAVSSSG 204
Query: 119 SSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI-TTDAFTSLVHS 177
+ + +L KLK + VFVVH+S L LF+ K+ +ME+ + WI T L H
Sbjct: 205 ENHMMNQLRKLKVSRASVFVVHMSEILVSRLFQCVEKLGLMEEAFAWILTARTMNYLEHF 264
Query: 178 INTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDA 237
T S MQG++G +S+ P + + ++F R RKR G + + H + ++ +D
Sbjct: 265 AITRS---MQGVIGFKSYIPVSE-EVKNFTSRLRKRMG---DDTETEHSSVIIGLRAHDI 317
Query: 238 VWSVALAME--------QKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIIN 289
+A A+E + S ++ LL I S F GL+G ++ + K + T++I+N
Sbjct: 318 ACILANAVEKFSVSGKVEASSNVSADLLDTIRHSRFKGLSGDIQISDNKFI-SETFEIVN 376
Query: 290 LMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQP- 348
+ + R +G W+ G S Q+ WPG P+ L K +
Sbjct: 377 IGREKQRRIGLWSGG---------------SFSQRRQIVWPGRSRKIPRHRVLAEKGEKK 421
Query: 349 -LRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD 407
LR+ V G++ V+V D GF +E+FK + PF FIP+ G+ D
Sbjct: 422 VLRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVFKTCIA--PFNYELEFIPYRGNND 479
Query: 408 DLVKQLYL--NNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKP 465
+L L + + VGD+ I + R Y DFT PYT+ G + I V+K F P
Sbjct: 480 NLAYLLSTQRDKYDAAVGDITITSNRSLYVDFTLPYTDIG-IGILTVKKKSQGMWTFFDP 538
Query: 466 FTRAVWILVAVISIYNGFVVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEKLHS 521
F +++W+ + G VVWL+ER+ PE GS Q W F+ H EKL
Sbjct: 539 FEKSLWLASGAFFVLTGIVVWLVERSVNPEFQGSWGQQLSMMLWFGFSTIVFAHREKLQK 598
Query: 522 NLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI--ETLQSSNAIIGYSRCLG 579
SR +VW+FV L+++ +Y+ANLTS T ++ + + S A +G +
Sbjct: 599 MSSRFLVIVWVFVVLILTSSYSANLTSTKTISRMQLNHQMVFGGSTTSMTAKLGSINAVE 658
Query: 580 DYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIE 639
YA L+ V E+ I + Y F + G GF F KGS L+P V
Sbjct: 659 AYAQLLRDGTLNHVINEIPYLSILIGNYPNDFVMTDRVTNTNGFGFMFQKGSDLVPKVSR 718
Query: 640 ALLKVSESGKLRELETSMIASEKCMEVNLH----------DDDDISS-LSPSGFWVLFVL 688
+ K+ G L+++E +K +N+H DDD+ S + LF++
Sbjct: 719 EIAKLRSLGMLKDMEKKWF--QKLDSLNVHSNTEEVASTNDDDEASKRFTFRELRGLFII 776
Query: 689 SGGISTIALVIFLWRCNWKIN 709
+G + L + L+ +++
Sbjct: 777 AGAAHVLVLALHLFHTRQEVS 797
>TAIR|locus:2079681 [details] [associations]
symbol:GLR1.4 "glutamate receptor 1.4" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005261 "cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=IDA] [GO:0030003
"cellular cation homeostasis" evidence=RCA;IDA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC009853 GO:GO:0030003
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072066 EMBL:AY072067
IPI:IPI00529459 RefSeq:NP_187408.2 UniGene:At.40336
ProteinModelPortal:Q8LGN1 STRING:Q8LGN1 PaxDb:Q8LGN1 PRIDE:Q8LGN1
EnsemblPlants:AT3G07520.1 GeneID:819940 KEGG:ath:AT3G07520
TAIR:At3g07520 eggNOG:NOG295667 InParanoid:Q8LGN1 OMA:NENIGFF
PhylomeDB:Q8LGN1 ArrayExpress:Q8LGN1 Genevestigator:Q8LGN1
GermOnline:AT3G07520 Uniprot:Q8LGN1
Length = 861
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 180/585 (30%), Positives = 296/585 (50%)
Query: 1 MDLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
MDL+ +++VEA++G Q+ E ++AE+ K ++PV+S + + ++ + +QA+ +
Sbjct: 103 MDLLQTEQVEALVGGQSLLEAKNLAELGEKTKVPVISSFQVPSSLSLAKYNYFIQATHDT 162
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
++ K IAA+ +++W +IYED D I P + + A IH+ F S
Sbjct: 163 SSEAKGIAALFSNFDWRTAVLIYEDDDDWRESIQPLVGHFQQNA----IHIEYKAEFSVS 218
Query: 121 RLSE----ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVH 176
E +L K K R+FV H+S +A LF A ++ MME+ Y WI T +
Sbjct: 219 SNEECIMKQLRKFKASGIRIFVAHISERIANRLFPCARRLGMMEEGYAWILTARSMNNFQ 278
Query: 177 SINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYD 236
N + M+G++G +S+ P + + +F R+++ E + ++ +D
Sbjct: 279 DTNYLAKEEMEGVIGFKSYIPLTE-ELHNFTLRWKRSLRLE----EVVTRMSVCSIWAHD 333
Query: 237 AVWSVALAME-QKSEKLN-QKLLRRILLS-DFDGLTGKVEFMNQKVAPAHTYQIINLMGK 293
WS+A A E K L+ LL I S GL+G ++F+++K + ++I+N++G+
Sbjct: 334 IAWSLARAAEVAKLPGLSVYDLLEAIPESAKHKGLSGDIKFIDKKFI-SDKFEIVNMIGR 392
Query: 294 SYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP----AKDQPL 349
R +G W G F I + + SS K L + WPG PK +L K + L
Sbjct: 393 GERSVGLWNSG-SF---ISNRRRRLSSTKALETIIWPGGSTRIPKIRSLKEKRHGKKKKL 448
Query: 350 RIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS---- 405
R+ VP G+ Q + V+ D T G+ I++F+ + LPF +IP+ G+
Sbjct: 449 RVLVPAGNITPQILEVKTDFKTGVTAATGYCIDVFETSI--LPFNYEVEYIPWPGAINYK 506
Query: 406 -YDDLVKQLYL--NNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLF 462
Y+DLV LY + + VGD+ I R Y DFT P+T+ GL ++ KS ++F
Sbjct: 507 NYNDLVYTLYSQKDKYDAAVGDITITDNRSLYVDFTLPFTDMGLAVVTAKDKS--MWIIF 564
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPELTGSALHQTGTFFWLSFNL----HGEK 518
KP T ++W+ +A I G +VWLIER+ + GS Q GT F+ H E+
Sbjct: 565 -KPLTLSLWLTIASFFILTGAIVWLIERHDNADFQGSCFQQIGTLLCFGFSTLVFAHRER 623
Query: 519 LHSNLSRMTTLVWLFVALVISQTYTANLTSMLTA---RGLEPTVN 560
L N+SR +VW+F L+++ YTA LTS++T RGL+ N
Sbjct: 624 LQHNMSRFVVIVWIFAVLILTSNYTATLTSVMTVQQIRGLKSNEN 668
Score = 248 (92.4 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 97/357 (27%), Positives = 160/357 (44%)
Query: 380 SIELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTH 439
SI F VE +P+ N+ +N L Q + + VGD+ I R Y DFT
Sbjct: 486 SILPFNYEVEYIPWPGAINYKNYNDLVYTLYSQK--DKYDAAVGDITITDNRSLYVDFTL 543
Query: 440 PYTESGLVMIFPVQKSG---NKTLLFLKPFTRAVWILV--AVISIYNGFVVWLIERNHWP 494
P+T+ GL ++ KS K L T A + ++ A++ + + + +
Sbjct: 544 PFTDMGLAVVTAKDKSMWIIFKPLTLSLWLTIASFFILTGAIVWLIERHDNADFQGSCFQ 603
Query: 495 ELTGSALHQTGTFFWLSFNLHGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTA-- 552
++ G+ L G F L F H E+L N+SR +VW+F L+++ YTA LTS++T
Sbjct: 604 QI-GTLLC-FG-FSTLVF-AHRERLQHNMSRFVVIVWIFAVLILTSNYTATLTSVMTVQQ 659
Query: 553 -RGLEPTVN------NIET-LQSSNAIIGYSRCLG-----DYASDLKSRKTGAVFLEVAE 599
RGL+ N +I + + N R G D+ + L++ + EV
Sbjct: 660 IRGLKSNENIGFFSASIAANVVNDNPTFQGPRYKGLKTADDFTNALRNGTISFIVDEVPY 719
Query: 600 AKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIA 659
K+F+AK+ F + G GFAF KGSPL+ V + K+ + KL+ +E
Sbjct: 720 VKLFVAKHPSEFVIVETESVTNGFGFAFQKGSPLVQKVSREIEKLRRTEKLKAIENWWFQ 779
Query: 660 SEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFLWRCNWKINENLLVNK 716
+ + +D L+ F LF+++G AL+++L W + +V K
Sbjct: 780 RQTTSATS---EDTFHPLTVYTFRGLFMITGVSFAFALIVYL--IPWNREQRQVVLK 831
>FB|FBgn0026255 [details] [associations]
symbol:clumsy "clumsy" species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:AE014134 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
RefSeq:NP_001036373.1 UniGene:Dm.12535 ProteinModelPortal:Q0E8N6
SMR:Q0E8N6 STRING:Q0E8N6 PRIDE:Q0E8N6 EnsemblMetazoa:FBtr0110895
GeneID:35394 KEGG:dme:Dmel_CG8681 UCSC:CG8681-RB CTD:35394
FlyBase:FBgn0026255 OMA:WTAMESA OrthoDB:EOG4FQZ6P PhylomeDB:Q0E8N6
GenomeRNAi:35394 NextBio:793295 Bgee:Q0E8N6 Uniprot:Q0E8N6
Length = 1002
Score = 266 (98.7 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 151/620 (24%), Positives = 259/620 (41%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT---ERWPFLLQASQNQLA 62
SQ V AI GP T + +A I IP + + D PN + E L + L
Sbjct: 82 SQGVIAIFGPSTGSSSDIIASICDTLDIPHIVY-DWIPNESIPDREHSTMTLNVHPDNLL 140
Query: 63 QMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHF-PSSR 121
+ +A IVQS+ W TV+YE D L L D L + G I + + P
Sbjct: 141 LSQGLAEIVQSFAWRSFTVVYET-DKE----LQQLQDIL-QVGEPISNPTTVKQLGPGDD 194
Query: 122 LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLV--HSIN 179
L+++K ++H + + + + ++AN++KM+ +Y F L+ HSI+
Sbjct: 195 HRPFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLG-EY----QSVFIPLLDTHSID 249
Query: 180 TSSISSMQG-ILGVRSHFPED---KPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTY 235
+S ++ I VR P D K D+ +R KR G Y + D N + +
Sbjct: 250 FGELSGVEANITTVRLMDPSDFHVKNVVHDWEER-EKREG-RYFKVDPNRVKSQMILLN- 306
Query: 236 DAVW--SVALA------------MEQKSEK---LNQKLLRRILLSDFDGLTGKVEFMNQK 278
DAVW S L +E + +K ++++ I + TG+++F
Sbjct: 307 DAVWLFSKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFNENG 366
Query: 279 VAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPK 338
T + + L + +L W G D + D + S K +GQ + K
Sbjct: 367 QRSFFTLRFMELNSDGFLDLATWDPVNGL-DVLNDDE---ESEKRVGQKL-------SNK 415
Query: 339 GWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYN 398
+ + + R+G P + + E + L + + G+SI+L + + L F +
Sbjct: 416 TFIVSS-----RLGAPFLTLREPQ---EGEILTGNSRYEGYSIDLINEIAKMLNFKFEFR 467
Query: 399 FIPFNGSY----------DDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVM 448
P +G Y D +V+QL N + D+ + + R Q DFT P+ G+ +
Sbjct: 468 MSP-DGKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISI 526
Query: 449 IFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--------PEL 496
+F + L FL PF+ VWI + ++ +++ + R + W PE
Sbjct: 527 LFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPHPCKEPEE 586
Query: 497 TGSALHQTGTFFWLSF-NLHGEKLH----SNLSRMTTLVWLFVALVISQTYTANLTSMLT 551
+ T WLS +L G+ + +R+ T +W F AL++ +YTANL + LT
Sbjct: 587 VENIWSIMNTT-WLSIGSLMGQGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLT 645
Query: 552 ARGLEPTVNNIETLQSSNAI 571
++N+ E L + + I
Sbjct: 646 NSRQANSINSAEDLAAQSKI 665
Score = 73 (30.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 34/139 (24%), Positives = 59/139 (42%)
Query: 586 KSRKTGAVFLEVAEAKIFLAKYCKGFTVAG-PTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
K + A +E + + + C + G YK G A P SP + A+LK+
Sbjct: 715 KGKNLYAFLMESTTLEYNVERKCDLVQIGGWLDYK--SYGIAMPFNSPYRKQISAAVLKL 772
Query: 645 SESGKLRELETS----MIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSG-GISTIALVI 699
E G+L EL+ M C E + D D L +F++ G G+ + A+V+
Sbjct: 773 GELGQLAELKRKWWKEMHGGGNC-EKSDEDGGDTPELGLENVGGVFLVLGLGLLS-AMVL 830
Query: 700 FLWRCNWKINENLLVNKKI 718
W + +++ + +KI
Sbjct: 831 GCTEFLWNV-KSVAIEEKI 848
>UNIPROTKB|E7EPY9 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790891
ProteinModelPortal:E7EPY9 SMR:E7EPY9 Ensembl:ENST00000399914
ArrayExpress:E7EPY9 Bgee:E7EPY9 Uniprot:E7EPY9
Length = 934
Score = 223 (83.6 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 136/609 (22%), Positives = 246/609 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAH 283
+ VA+A + S+ +L + + I + +DGLTG + F +
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDF 388
Query: 284 TYQIINLMGKSYRELGFWTY--GLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGW 340
II+L + ++G W GL +D+ D N + S+ + + + +
Sbjct: 389 DLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLI----VTTILEEPY 444
Query: 341 TLPAK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNF 399
+ K D+PL G F+ Y D L+ + GF + V+ +P Y
Sbjct: 445 VMYRKSDKPL-YG---NDRFEGYC---LDLLKELSNILGFIYD-----VKLVPDG-KYGA 491
Query: 400 IPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKT 459
G ++ +VK+L + V + I R + DF+ P+ G+ +++ N
Sbjct: 492 QNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 551
Query: 460 LL-FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----P-ELTGSALHQTGTF--- 507
+ FL P + +W+ V + + V+++I R W P + T
Sbjct: 552 VFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNS 611
Query: 508 FWLSFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
FW G +L LS R+ +W F L+I +YTANL + LT +E +++
Sbjct: 612 FWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 671
Query: 563 ETLQSSNAI 571
+ L I
Sbjct: 672 DDLAKQTKI 680
Score = 82 (33.9 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 848
Query: 711 NLLVNKK 717
N + +K
Sbjct: 849 NNDIEQK 855
>UNIPROTKB|E7EPZ0 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792601
ProteinModelPortal:E7EPZ0 SMR:E7EPZ0 Ensembl:ENST00000399909
ArrayExpress:E7EPZ0 Bgee:E7EPZ0 Uniprot:E7EPZ0
Length = 903
Score = 223 (83.6 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 136/609 (22%), Positives = 246/609 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAH 283
+ VA+A + S+ +L + + I + +DGLTG + F +
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDF 388
Query: 284 TYQIINLMGKSYRELGFWTY--GLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGW 340
II+L + ++G W GL +D+ D N + S+ + + + +
Sbjct: 389 DLDIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLI----VTTILEEPY 444
Query: 341 TLPAK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNF 399
+ K D+PL G F+ Y D L+ + GF + V+ +P Y
Sbjct: 445 VMYRKSDKPL-YG---NDRFEGYC---LDLLKELSNILGFIYD-----VKLVPDG-KYGA 491
Query: 400 IPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKT 459
G ++ +VK+L + V + I R + DF+ P+ G+ +++ N
Sbjct: 492 QNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 551
Query: 460 LL-FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----P-ELTGSALHQTGTF--- 507
+ FL P + +W+ V + + V+++I R W P + T
Sbjct: 552 VFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNS 611
Query: 508 FWLSFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
FW G +L LS R+ +W F L+I +YTANL + LT +E +++
Sbjct: 612 FWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 671
Query: 563 ETLQSSNAI 571
+ L I
Sbjct: 672 DDLAKQTKI 680
Score = 80 (33.2 bits), Expect = 9.2e-18, Sum P(2) = 9.2e-18
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 848
Query: 711 N 711
N
Sbjct: 849 N 849
>UNIPROTKB|I3LT35 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:CU861922
EMBL:FP325290 Ensembl:ENSSSCT00000028121 Uniprot:I3LT35
Length = 896
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 135/609 (22%), Positives = 245/609 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 177
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 178 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 237
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P ++ +R A P + G + + YDAV
Sbjct: 238 -MTGFRLLNI------DNPHVSSIIDKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 289
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF-MNQKVAPAH 283
+ VA+A + S+ +L + + I + +DGLTG++ F +
Sbjct: 290 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRITFNKTDGLRKDF 349
Query: 284 TYQIINLMGKSYRELGFWTY--GLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGW 340
II+L + ++G W GL +D D N + S+ + + + +
Sbjct: 350 DLDIISLKEEGTEKIGIWNSNSGLNMTDGNKDRSNNITDSLANRTLI----VTTILEEPY 405
Query: 341 TLPAK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNF 399
+ K D+PL G F+ Y D L+ + GF + V+ +P Y
Sbjct: 406 VMYRKSDKPL-YG---NDRFEGYC---LDLLKELSNILGFIYD-----VKLVPDG-KYGA 452
Query: 400 IPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKT 459
G ++ +VK+L + V + I R + DF+ P+ G+ +++ N
Sbjct: 453 QNDKGEWNGMVKELIDHKADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 512
Query: 460 LL-FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----P-ELTGSALHQTGTF--- 507
+ FL P + +W+ V + + V+++I R W P + T
Sbjct: 513 VFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNS 572
Query: 508 FWLSFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
FW G +L LS R+ +W F L+I +YTANL + LT +E +++
Sbjct: 573 FWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 632
Query: 563 ETLQSSNAI 571
+ L I
Sbjct: 633 DDLAKQTKI 641
Score = 80 (33.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 695 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 753
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 754 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 809
Query: 711 N 711
N
Sbjct: 810 N 810
>UNIPROTKB|Q38PU3 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0030424 GO:GO:0043197 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934
HSSP:P22756 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3
Length = 908
Score = 217 (81.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 136/606 (22%), Positives = 250/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 161
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 162 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 215
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 216 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 275
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 276 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 330
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 331 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 390
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 391 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 446
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 447 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 494
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 555 FLNPLSPDIWMYVLLACLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 615 GVGALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 566 QSSNAI 571
I
Sbjct: 675 AKQTKI 680
Score = 83 (34.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 848
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 849 NAQLEKRSFC 858
>MGI|MGI:95815 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta
2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear
response" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066
"glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=ISO;IC] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042391 "regulation of membrane potential"
evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113
"receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IGI]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;TAS] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of
JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=ISO;IMP]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094
GO:GO:0006886 GO:GO:0016020 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0043204
GO:GO:0051402 GO:GO:0045202 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249
GO:GO:0005622 GO:GO:0006874 GO:GO:0019228 GO:GO:0043113
GO:GO:0032839 GO:GO:0046328 GO:GO:0001662 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 eggNOG:NOG316680
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
OrthoDB:EOG41C6VH EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305
IPI:IPI00131566 IPI:IPI00223171 PIR:A43954 PIR:S35792
UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087
IntAct:P39087 STRING:P39087 PhosphoSite:P39087 PaxDb:P39087
PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484
Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487
GeneTree:ENSGT00590000083056 InParanoid:P39087 Bgee:P39087
Genevestigator:P39087 GermOnline:ENSMUSG00000056073 Uniprot:P39087
Length = 908
Score = 217 (81.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 135/606 (22%), Positives = 251/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 161
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 162 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 215
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 216 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 275
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 276 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 330
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 331 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 390
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W + GL +++ N + S+ + + + + L
Sbjct: 391 VISLKEEGLEKIGTWDPSSGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 446
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 447 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDV--- 494
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 566 QSSNAI 571
I
Sbjct: 675 AKQTKI 680
Score = 83 (34.3 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 848
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 849 NAQLEKRSFC 858
>UNIPROTKB|F1LP48 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation
of synaptic transmission" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
IPI:IPI00324708 PRIDE:F1LP48 Ensembl:ENSRNOT00000000415
ArrayExpress:F1LP48 Uniprot:F1LP48
Length = 870
Score = 216 (81.1 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 135/606 (22%), Positives = 250/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 65 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 124 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 177
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 178 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 237
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 238 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 292
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 293 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 352
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 353 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 408
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 409 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDV--- 456
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 457 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 516
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 517 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 576
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 577 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 636
Query: 566 QSSNAI 571
I
Sbjct: 637 AKQTKI 642
Score = 83 (34.3 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 696 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 754
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 755 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 810
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 811 NAQLEKRSFC 820
>UNIPROTKB|F1M4B0 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
IPI:IPI00952320 ProteinModelPortal:F1M4B0
Ensembl:ENSRNOT00000067147 ArrayExpress:F1M4B0 Uniprot:F1M4B0
Length = 895
Score = 217 (81.4 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 138/610 (22%), Positives = 249/610 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 176
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 177 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 236
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 237 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 288
Query: 238 VWSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF-MNQKVAPA 282
V+ VA+A + S+ +L + + I + +DGLTG++ F +
Sbjct: 289 VYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKD 348
Query: 283 HTYQIINLMGKSYRELGFWTY--GLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKG 339
II+L + ++G W GL +D D N + S+ + + +
Sbjct: 349 FDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLI----VTTILEEP 404
Query: 340 WTLPAK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYN 398
+ + K D+PL G F+ Y D L+ + GF + V+ +P Y
Sbjct: 405 YVMYRKSDKPL-YG---NDRFEGYC---LDLLKELSNILGFLYD-----VKLVPDG-KYG 451
Query: 399 FIPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNK 458
G ++ +VK+L + V + I R + DF+ P+ G+ +++ N
Sbjct: 452 AQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 511
Query: 459 TLL-FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----P-ELTGSALHQTGTF-- 507
+ FL P + +W+ V + + V+++I R W P + T
Sbjct: 512 GVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLN 571
Query: 508 -FWLSFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNN 561
FW G +L LS R+ +W F L+I +YTANL + LT +E +++
Sbjct: 572 SFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 631
Query: 562 IETLQSSNAI 571
+ L I
Sbjct: 632 ADDLAKQTKI 641
Score = 82 (33.9 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 695 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 753
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 754 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 809
Query: 711 NLLVNKK 717
N V +K
Sbjct: 810 NNDVEQK 816
>RGD|2733 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA;ISO;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032839
"dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;TAS] [GO:0035249
"synaptic transmission, glutamatergic" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043113 "receptor clustering" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0046328
"regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048172
"regulation of short-term neuronal synaptic plasticity" evidence=ISO]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708 PIR:S19098
RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T
PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT
PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G
PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT
PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3
PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR
PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX
PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I
PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT
PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260 SMR:P42260
DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260 PRIDE:P42260
GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260
BindingDB:P42260 ChEMBL:CHEMBL3607 EvolutionaryTrace:P42260
NextBio:610770 ArrayExpress:P42260 Genevestigator:P42260
GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 216 (81.1 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 135/606 (22%), Positives = 250/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 161
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 162 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 215
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 216 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 275
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 276 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 330
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 331 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 390
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 391 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 446
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 447 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDV--- 494
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 566 QSSNAI 571
I
Sbjct: 675 AKQTKI 680
Score = 83 (34.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 848
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 849 NAQLEKRSFC 858
>UNIPROTKB|P42260 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228
GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708
PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y
PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR
PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F
PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H
PDB:3QLT PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T
PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C
PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW
PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H
PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H
PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260
SMR:P42260 DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260
PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733
InParanoid:P42260 BindingDB:P42260 ChEMBL:CHEMBL3607
EvolutionaryTrace:P42260 NextBio:610770 ArrayExpress:P42260
Genevestigator:P42260 GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 216 (81.1 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 135/606 (22%), Positives = 250/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 161
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 162 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 215
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 216 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 275
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 276 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 330
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 331 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 390
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 391 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 446
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 447 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDV--- 494
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 566 QSSNAI 571
I
Sbjct: 675 AKQTKI 680
Score = 83 (34.3 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 848
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 849 NAQLEKRSFC 858
>UNIPROTKB|F8WEZ8 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0051402 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 EMBL:AL109919
EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 HGNC:HGNC:4580
IPI:IPI01012035 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8
Ensembl:ENST00000369134 ArrayExpress:F8WEZ8 Bgee:F8WEZ8
Uniprot:F8WEZ8
Length = 859
Score = 215 (80.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 135/606 (22%), Positives = 250/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 54 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 112
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 113 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 166
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 167 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 226
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 227 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 281
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 282 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 341
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 342 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 397
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 398 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 445
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 446 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 505
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 506 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 565
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 566 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Query: 566 QSSNAI 571
I
Sbjct: 626 AKQTKI 631
Score = 83 (34.3 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 685 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 743
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 744 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 799
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 800 NAQLEKRSFC 809
>UNIPROTKB|Q13002 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation
of synaptic transmission" evidence=IDA] [GO:0050806 "positive
regulation of synaptic transmission" evidence=IMP] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=NAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0005887 GO:GO:0051967 GO:GO:0007268 EMBL:CH471051
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
Orphanet:88616 GO:GO:0050806 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:U16126
EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610
EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338
EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529
EMBL:AP002530 IPI:IPI00011396 IPI:IPI00396613 IPI:IPI00642591
IPI:IPI00746275 IPI:IPI00815931 PIR:A54260 RefSeq:NP_001159719.1
RefSeq:NP_068775.1 RefSeq:NP_786944.1 UniGene:Hs.98262 PDB:3QXM
PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 IntAct:Q13002
STRING:Q13002 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002
PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991
Ensembl:ENST00000369137 Ensembl:ENST00000369138
Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898
KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3
CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580
HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092
neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202
OMA:VNGQWNG OrthoDB:EOG41C6VH PhylomeDB:Q13002 BindingDB:Q13002
ChEMBL:CHEMBL3683 GenomeRNAi:2898 NextBio:11469 ArrayExpress:Q13002
Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002
GermOnline:ENSG00000164418 Uniprot:Q13002
Length = 908
Score = 215 (80.7 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 135/606 (22%), Positives = 250/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 161
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 162 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 215
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 216 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 275
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 276 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 330
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 331 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 390
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 391 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 446
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 447 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 494
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 566 QSSNAI 571
I
Sbjct: 675 AKQTKI 680
Score = 83 (34.3 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 848
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 849 NAQLEKRSFC 858
>UNIPROTKB|F1P7K5 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5
Length = 859
Score = 211 (79.3 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 134/606 (22%), Positives = 249/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 54 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 112
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 113 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 166
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 167 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 226
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 227 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 281
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++ ++Q K + + + I + ++GLTG++ F +
Sbjct: 282 SVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 341
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 342 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 397
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 398 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 445
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 446 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 505
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 506 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 565
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 566 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 625
Query: 566 QSSNAI 571
I
Sbjct: 626 AKQTKI 631
Score = 83 (34.3 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 685 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 743
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 744 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 799
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 800 NAQLEKRSFC 809
>UNIPROTKB|F1NU20 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0019228 "regulation of action
potential in neuron" evidence=IEA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0051967
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0042734
GO:GO:0043524 GO:GO:0005622 GO:GO:0042391 GO:GO:0006874
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AADN02002208 EMBL:AADN02002209
EMBL:AADN02002210 EMBL:AADN02002211 EMBL:AADN02002212
EMBL:AADN02002213 EMBL:AADN02002214 EMBL:AADN02002215
EMBL:AADN02002216 EMBL:AADN02002217 EMBL:AADN02002218
EMBL:AADN02002219 EMBL:AADN02002220 EMBL:AADN02002221
EMBL:AADN02002222 IPI:IPI00573083 ProteinModelPortal:F1NU20
Ensembl:ENSGALT00000024893 Uniprot:F1NU20
Length = 877
Score = 211 (79.3 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 134/606 (22%), Positives = 249/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 72 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 130
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 131 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 184
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 185 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 244
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 245 ----MTGFRILNTENSQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 299
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++A++Q K + + + I + ++GLTG++ F +
Sbjct: 300 SVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKSNGLRTDFDLD 359
Query: 287 IINLMGKSYRELGFWT--YGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL ++ N + S+ + + + + +
Sbjct: 360 VISLKEEGLEKVGTWDPLSGLNMTENQKGKPANITDSLSNRSLI----VTTILEEPYVMF 415
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GFS E+ LVE + +
Sbjct: 416 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFSYEI--RLVEDGKYGAQEDA--- 463
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
+G ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 464 SGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 523
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 524 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 583
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 584 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Query: 566 QSSNAI 571
I
Sbjct: 644 AKQTKI 649
Score = 83 (34.3 bits), Expect = 8.3e-17, Sum P(2) = 8.3e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 703 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 761
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 762 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 817
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 818 NAQLEKRSFC 827
>UNIPROTKB|F1P7K6 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6
Length = 891
Score = 211 (79.3 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 134/606 (22%), Positives = 249/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 86 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 144
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 145 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 198
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 199 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 258
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 259 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 313
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++ ++Q K + + + I + ++GLTG++ F +
Sbjct: 314 SVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 373
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 374 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 429
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 430 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 477
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 478 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 537
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 538 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 597
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 598 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 657
Query: 566 QSSNAI 571
I
Sbjct: 658 AKQTKI 663
Score = 83 (34.3 bits), Expect = 8.7e-17, Sum P(2) = 8.7e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 717 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 775
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 776 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 831
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 832 NAQLEKRSFC 841
>UNIPROTKB|F1MG21 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 CTD:2898 KO:K05202 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:DAAA02026130 EMBL:DAAA02026131
EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134
EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137
EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140
EMBL:DAAA02026141 EMBL:DAAA02026142 IPI:IPI00706450
RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21
Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226
NextBio:20899512 Uniprot:F1MG21
Length = 908
Score = 211 (79.3 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 134/606 (22%), Positives = 249/606 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 161
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 162 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 215
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 216 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 275
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 276 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 330
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++ ++Q K + + + I + ++GLTG++ F +
Sbjct: 331 SVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 390
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 391 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 446
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 447 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 494
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 495 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 554
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ + + + V+++I R W P + T FW
Sbjct: 555 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWF 614
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 615 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 674
Query: 566 QSSNAI 571
I
Sbjct: 675 AKQTKI 680
Score = 83 (34.3 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 734 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 793 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 848
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 849 NAQLEKRSFC 858
>UNIPROTKB|Q38PU0 [details] [associations]
symbol:GRIK5 "KA2" species:9541 "Macaca fascicularis"
[GO:0005622 "intracellular" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0043197
GO:GO:0035235 GO:GO:0005622 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159937
ProteinModelPortal:Q38PU0 Uniprot:Q38PU0
Length = 891
Score = 183 (69.5 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 116/515 (22%), Positives = 223/515 (43%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H S
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVEDS 261
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
S ILG S F P + +F + + E E P A +DAV V A
Sbjct: 262 S--NILGF-SMFNTSHPFYPEFVRSLNMSW-RENCEASTYPGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 378 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 416
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 417 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 473
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L +N A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 474 APEPNGSWTGMVGEL-INRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 531
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 532 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 566
Score = 77 (32.2 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 737 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 796
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 797 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 828
Score = 71 (30.1 bits), Expect = 7.8e-16, Sum P(3) = 7.8e-16
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 617 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 664
>UNIPROTKB|J9P242 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2901 KO:K05205 OMA:NINSVME EMBL:AAEX03000923
RefSeq:XP_541594.4 Ensembl:ENSCAFT00000043369 GeneID:484480
KEGG:cfa:484480 Uniprot:J9P242
Length = 980
Score = 183 (69.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 114/515 (22%), Positives = 222/515 (43%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H +
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHL--DGIVE 259
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
ILG S F P + +F + + E E P A +DAV V A
Sbjct: 260 DTSNILGF-SMFNTSHPFYPEFVRSLNMSW-RENCEASTYPGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 378 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 416
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 417 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 473
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L +N A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 474 APEPNGSWTGMVGEL-INRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 531
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 532 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 566
Score = 77 (32.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 737 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 796
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 797 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 828
Score = 71 (30.1 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 617 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 664
>UNIPROTKB|F1RYR0 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:VNGQWNG GeneTree:ENSGT00590000083056
EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396
EMBL:CU928568 Ensembl:ENSSSCT00000004819 Uniprot:F1RYR0
Length = 872
Score = 169 (64.5 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 110/509 (21%), Positives = 213/509 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 66 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 124
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 125 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 178
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 179 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 238
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 239 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 293
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++ ++Q K + + + I + ++GLTG++ F +
Sbjct: 294 SVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 353
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 354 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 409
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 410 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 457
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 458 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 517
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P + +W+ + + + V+++I R
Sbjct: 518 FLNPLSPDIWMYILLAYLGVSCVLFVIAR 546
Score = 83 (34.3 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 29/130 (22%), Positives = 53/130 (40%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 698 AFLMESTTIEFVTQRNCN-LTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQLQEEGKLH 756
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E + + S+L +F VL+ G+ +++ + + +K +
Sbjct: 757 MMKEKWWRGNGCPE---EESKEASALGVQNIGGIFIVLAAGL-VLSVFVAVGEFLYKSKK 812
Query: 711 NLLVNKKIRC 720
N + K+ C
Sbjct: 813 NAQLEKRSFC 822
Score = 77 (32.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+W F L+I +YTANL + LT +E +++ + L I
Sbjct: 603 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKI 644
>MGI|MGI:95818 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5 (gamma
2)" species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0008066 "glutamate receptor
activity" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IGI] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IMP] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043113 "receptor clustering" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] [GO:0051649
"establishment of localization in cell" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95818 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734
GO:GO:0035249 InterPro:IPR001828 EMBL:CH466593 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2901 KO:K05205
OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630 EMBL:D10011
EMBL:AC125468 IPI:IPI00123538 PIR:JH0589 RefSeq:NP_032194.2
UniGene:Mm.2879 ProteinModelPortal:Q61626 IntAct:Q61626
STRING:Q61626 PhosphoSite:Q61626 PaxDb:Q61626 PRIDE:Q61626
Ensembl:ENSMUST00000003468 GeneID:14809 KEGG:mmu:14809
InParanoid:Q61626 ChiTaRS:GRIK5 NextBio:286991
Genevestigator:Q61626 GermOnline:ENSMUSG00000003378 Uniprot:Q61626
Length = 979
Score = 182 (69.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 116/515 (22%), Positives = 223/515 (43%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H S
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPILHLDGIVEDS 261
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
S ILG S F P + +F + + E E P A +DAV V A
Sbjct: 262 S--NILGF-SMFNTSHPFYPEFVRSLNMSW-RENCEASTYPGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 378 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 416
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 417 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 473
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L +N A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 474 APEPNGSWTGMVGEL-INRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 531
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 532 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 566
Score = 77 (32.2 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 737 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 796
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 797 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 828
Score = 71 (30.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 617 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 664
>RGD|2735 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006621 "protein
retention in ER lumen" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IDA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0017124
"SH3 domain binding" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISO] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=IEA;ISO] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
[GO:0051649 "establishment of localization in cell" evidence=IMP]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2735 GO:GO:0014069
GO:GO:0043525 GO:GO:0071333 GO:GO:0017124 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0035249 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 GO:GO:0032983 PDB:3QLU PDB:3QLV PDBsum:3QLU PDBsum:3QLV
CTD:2901 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630
EMBL:Z11581 EMBL:U08258 IPI:IPI00207006 PIR:JH0592 RefSeq:NP_113696.1
UniGene:Rn.74042 PDB:3OM0 PDB:3OM1 PDBsum:3OM0 PDBsum:3OM1
ProteinModelPortal:Q63273 SMR:Q63273 STRING:Q63273 PhosphoSite:Q63273
PRIDE:Q63273 Ensembl:ENSRNOT00000027578 GeneID:24407 KEGG:rno:24407
UCSC:RGD:2735 InParanoid:Q63273 BindingDB:Q63273 ChEMBL:CHEMBL4041
NextBio:603217 Genevestigator:Q63273 GermOnline:ENSRNOG00000020310
Uniprot:Q63273
Length = 979
Score = 182 (69.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 116/515 (22%), Positives = 223/515 (43%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H S
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLVLRKASELGMTSAFYKYILTTMDFPILHLDGIVEDS 261
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
S ILG S F P + +F + + E E P A +DAV V A
Sbjct: 262 S--NILGF-SMFNTSHPFYPEFVRSLNMSW-RENCEASTYPGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 378 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 416
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 417 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 473
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L +N A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 474 APEPNGSWTGMVGEL-INRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 531
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 532 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 566
Score = 77 (32.2 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 737 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 796
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 797 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 828
Score = 71 (30.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 617 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 664
>UNIPROTKB|F1PHA8 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2900 KO:K05204 OMA:NRAPERL EMBL:AAEX03003415
EMBL:AAEX03003416 EMBL:AAEX03003417 EMBL:AAEX03003418
EMBL:AAEX03003419 RefSeq:XP_853030.3 Ensembl:ENSCAFT00000018877
GeneID:610429 KEGG:cfa:610429 Uniprot:F1PHA8
Length = 956
Score = 181 (68.8 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 111/520 (21%), Positives = 225/520 (43%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFIKFQFQRFTTLNLHPSNTDISV-- 148
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L +
Sbjct: 149 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDTRDP--T 201
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT--S 181
L++++ + ++H + ++ + KA ++ M+ Y +I FT+L S+ S
Sbjct: 202 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYI----FTNLEFSLQRMDS 257
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP--G-ALA-VQTYDA 237
+ ILG S F + FQ+F + + + +E+ +H P G AL+ +DA
Sbjct: 258 LVDDRVNILGF-SIFNQSHAFFQEFAQSLNQSW-----QENCDHVPFTGPALSSALLFDA 311
Query: 238 VWSVALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVA 280
V++V A+++ +S+++ K L+ + + + +GLTG +EF ++
Sbjct: 312 VYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQR 371
Query: 281 PAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGW 340
+ +I+ +R++G W G S +D + S++ D +F
Sbjct: 372 SNYALKILQFTRNGFRQIGQWHVADGLS---MDSRLYASNISD--SLF------------ 414
Query: 341 TLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI 400
+ L + + + + + + E+ + GF +++ K L E L F +
Sbjct: 415 -----NTTLVVTTILENPYLM-LKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLV 468
Query: 401 -------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPV 452
P NG++ +V +L V + I A R + DF+ P+ G+ +++ V
Sbjct: 469 GDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRV 528
Query: 453 QKSGNKT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
G K FL PF+ VW+ + + + V++L+ R
Sbjct: 529 HM-GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVAR 567
Score = 77 (32.2 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + ++ + +++ L AI
Sbjct: 618 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAI 665
Score = 71 (30.1 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 719 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 777
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 778 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 829
>UNIPROTKB|Q16478 [details] [associations]
symbol:GRIK5 "Glutamate receptor ionotropic, kainate 5"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=IEA] [GO:0051649 "establishment of localization
in cell" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0071333 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0043204 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0035249 EMBL:CH471126
DrugBank:DB00142 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CleanEx:HS_GRIK2 EMBL:S40369 EMBL:AJ249209 IPI:IPI00103335
IPI:IPI00293288 PIR:I57936 RefSeq:NP_002079.3 UniGene:Hs.367799
ProteinModelPortal:Q16478 SMR:Q16478 IntAct:Q16478
MINT:MINT-1427286 STRING:Q16478 PhosphoSite:Q16478 DMDM:209572626
PRIDE:Q16478 DNASU:2901 Ensembl:ENST00000262895
Ensembl:ENST00000301218 GeneID:2901 KEGG:hsa:2901 UCSC:uc002osi.1
CTD:2901 GeneCards:GC19M042502 H-InvDB:HIX0022359
H-InvDB:HIX0027521 HGNC:HGNC:4583 MIM:600283 neXtProt:NX_Q16478
PharmGKB:PA28977 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP
BindingDB:Q16478 ChEMBL:CHEMBL2675 GenomeRNAi:2901 NextBio:11483
Bgee:Q16478 CleanEx:HS_GRIK5 Genevestigator:Q16478
GermOnline:ENSG00000105737 GO:GO:0031630 Uniprot:Q16478
Length = 980
Score = 182 (69.1 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 116/515 (22%), Positives = 223/515 (43%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H S
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVEDS 261
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
S ILG S F P + +F + + E E P A +DAV V A
Sbjct: 262 S--NILGF-SMFNTSHPFYPEFVRSLNMSW-RENCEASTYLGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 378 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 416
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 417 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 473
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L +N A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 474 APEPNGSWTGMVGEL-INRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 531
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 532 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 566
Score = 76 (31.8 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 20/92 (21%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 737 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 796
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +++ + I+ +A++ F+W
Sbjct: 797 KGLGMENIGGIFIVLICGLIIAVFVAVMEFIW 828
Score = 71 (30.1 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 617 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 664
>UNIPROTKB|E1C2Q1 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AADN02041869 EMBL:AADN02041870
IPI:IPI00596764 ProteinModelPortal:E1C2Q1
Ensembl:ENSGALT00000010723 Uniprot:E1C2Q1
Length = 869
Score = 181 (68.8 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 113/520 (21%), Positives = 225/520 (43%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V +LGP +S +SS+ + I +K++P A + +R+ L L S ++
Sbjct: 76 VVGVLGPSSSPASSSIISNICGEKEVPHFRVAPEEFLKLQLQRFTTLNLHPSNTDISV-- 133
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L S +
Sbjct: 134 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDD--SRDPT 186
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT--S 181
L++++ + +VH + ++ + +KA ++ M Y +I FT+L S+ S
Sbjct: 187 PLLKEIRDDKTATIIVHANASMSHTILQKAAELGMASAYYTYI----FTNLEFSLQRLDS 242
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP--G-ALA-VQTYDA 237
+ ILG S F + FQ+F + + + +E+ +H P G AL+ +DA
Sbjct: 243 QLDDRVNILGF-SIFNQSHAFFQEFVQSLNQSW-----QENCDHAPFTGPALSSALLFDA 296
Query: 238 VWSVALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVA 280
V++V A+++ +S+++ K L+ + + + +GLTG +EF ++
Sbjct: 297 VYAVVSAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQR 356
Query: 281 PAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGW 340
+ +I+ +R++G W G S +D + S++ D +F
Sbjct: 357 SNYALKILQHTHSGFRQIGHWHVSEGLS---MDNRIFSSNISD--SLF------------ 399
Query: 341 TLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI 400
+ L + + + + + + EL + GF +++ K L E L F + +
Sbjct: 400 -----NTTLIVTTILENPYLM-LKWNHQELEGNDRYEGFCVDMLKELAEILRFNYKIHLV 453
Query: 401 -------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPV 452
P NG++ +V +L V + I A R + DF+ P+ G+ +++ V
Sbjct: 454 GDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRV 513
Query: 453 QKSGNKT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
G K FL PF+ VW+ + + + V++L+ R
Sbjct: 514 HM-GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVAR 552
Score = 73 (30.8 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + ++ + +++ L I
Sbjct: 603 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTTI 650
Score = 72 (30.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 704 AFLLESTMNEYYRQRNCN-LTQVGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 762
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 763 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 814
>UNIPROTKB|D4ACE2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00231401
ProteinModelPortal:D4ACE2 Ensembl:ENSRNOT00000002142
ArrayExpress:D4ACE2 Uniprot:D4ACE2
Length = 834
Score = 166 (63.5 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 114/515 (22%), Positives = 213/515 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 33 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 91
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 92 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 144
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 145 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 204
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 205 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 256
Query: 238 VWSVALAMEQKSE--------------KLNQKLLRRI--LLSDFDGLTGKVEF-MNQKVA 280
V+ VA+A + S+ +L + + I + +DGLTG++ F +
Sbjct: 257 VYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARARWDGLTGRITFNKTDGLR 316
Query: 281 PAHTYQIINLMGKSYRELGFWTY--GLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTP 337
II+L + ++G W GL +D D N + S+ + +
Sbjct: 317 KDFDLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLI----VTTILE 372
Query: 338 KGWTLPAK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLP 396
+ + + K D+PL G F+ Y D L+ + GF + V+ +P
Sbjct: 373 EPYVMYRKSDKPL-YG---NDRFEGYC---LDLLKELSNILGFLYD-----VKLVPDG-K 419
Query: 397 YNFIPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSG 456
Y G ++ +VK+L + V + I R + DF+ P+ G+ +++
Sbjct: 420 YGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGT 479
Query: 457 NKTLL-FLKPFTRAVWILVAVISIYNGFVVWLIER 490
N + FL P + +W+ V + + V+++I R
Sbjct: 480 NPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIAR 514
Score = 81 (33.6 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 486 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 545
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 546 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 605
Query: 566 QSSNAI 571
I
Sbjct: 606 AKQTKI 611
Score = 79 (32.9 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 665 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 723
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 724 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 779
Query: 711 N 711
N
Sbjct: 780 N 780
>UNIPROTKB|Q16099 [details] [associations]
symbol:GRIK4 "Glutamate receptor ionotropic, kainate 4"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005634 GO:GO:0005887 EMBL:CH471065 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0043204
GO:GO:0042734 GO:GO:0043195 DrugBank:DB00142 InterPro:IPR001828
GO:GO:0031960 eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:S67803
EMBL:AK292726 IPI:IPI00292269 PIR:JH0826 RefSeq:NP_055434.2
UniGene:Hs.568901 ProteinModelPortal:Q16099 SMR:Q16099
STRING:Q16099 TCDB:1.A.10.1.9 PhosphoSite:Q16099 DMDM:209572625
PaxDb:Q16099 PRIDE:Q16099 Ensembl:ENST00000438375
Ensembl:ENST00000527524 GeneID:2900 KEGG:hsa:2900 UCSC:uc001pxn.2
CTD:2900 GeneCards:GC11P120480 H-InvDB:HIX0036043 HGNC:HGNC:4582
MIM:600282 neXtProt:NX_Q16099 PharmGKB:PA28976 InParanoid:Q16099
KO:K05204 OMA:NRAPERL PhylomeDB:Q16099 BindingDB:Q16099
ChEMBL:CHEMBL2829 GenomeRNAi:2900 NextBio:11479 Bgee:Q16099
CleanEx:HS_GRIK4 Genevestigator:Q16099 GermOnline:ENSG00000149403
Uniprot:Q16099
Length = 956
Score = 179 (68.1 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 111/520 (21%), Positives = 224/520 (43%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVKFQFQRFTTLNLHPSNTDISV-- 148
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L +
Sbjct: 149 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDTRDP--T 201
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT--S 181
L++++ + ++H + ++ + KA ++ M+ Y +I FT+L S+ S
Sbjct: 202 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYI----FTNLEFSLQRMDS 257
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP--G-ALA-VQTYDA 237
+ ILG S F + FQ+F + + + +E+ +H P G AL+ +DA
Sbjct: 258 LVDDRVNILGF-SIFNQSHAFFQEFAQSLNQSW-----QENCDHVPFTGPALSSALLFDA 311
Query: 238 VWSVALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVA 280
V++V A+++ +S+++ K L+ + + + +GLTG +EF ++
Sbjct: 312 VYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQR 371
Query: 281 PAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGW 340
+ +I+ +R++G W G S +D S++ D +F
Sbjct: 372 SNYALKILQFTRNGFRQIGQWHVAEGLS---MDSHLYASNISDT--LF------------ 414
Query: 341 TLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI 400
+ L + + + + + + E+ + GF +++ K L E L F +
Sbjct: 415 -----NTTLVVTTILENPYLM-LKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLV 468
Query: 401 -------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPV 452
P NG++ +V +L V + I A R + DF+ P+ G+ +++ V
Sbjct: 469 GDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRV 528
Query: 453 QKSGNKT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
G K FL PF+ VW+ + + + V++L+ R
Sbjct: 529 HM-GRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVAR 567
Score = 77 (32.2 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + ++ + +++ L AI
Sbjct: 618 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAI 665
Score = 71 (30.1 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 719 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 777
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 778 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 829
>MGI|MGI:95817 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95817
GO:GO:0005634 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0043204 GO:GO:0035235 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 EMBL:AC160123 GO:GO:0031960 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0032983 CTD:2900
KO:K05204 OMA:NRAPERL EMBL:AK032029 EMBL:AC122449 EMBL:AC136903
EMBL:AC140387 IPI:IPI00273856 RefSeq:NP_780690.2 UniGene:Mm.370291
ProteinModelPortal:Q8BMF5 SMR:Q8BMF5 STRING:Q8BMF5
PhosphoSite:Q8BMF5 PRIDE:Q8BMF5 Ensembl:ENSMUST00000034515
Ensembl:ENSMUST00000114865 GeneID:110637 KEGG:mmu:110637
InParanoid:Q8BMF5 OrthoDB:EOG402WRF NextBio:364375 Bgee:Q8BMF5
CleanEx:MM_GRIK4 Genevestigator:Q8BMF5
GermOnline:ENSMUSG00000032017 Uniprot:Q8BMF5
Length = 956
Score = 176 (67.0 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 108/519 (20%), Positives = 223/519 (42%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHPSNTDISV-- 148
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L +
Sbjct: 149 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDTRDP--T 201
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT--S 181
L++++ + ++H + ++ + KA ++ M+ Y +I FT+L S+ S
Sbjct: 202 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYI----FTNLEFSLQRMDS 257
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP--G-ALA-VQTYDA 237
+ ILG S F + FQ+F + + + +E+ +H P G AL+ +DA
Sbjct: 258 LVDDRVNILGF-SIFNQSHAFFQEFSQSLNQSW-----QENCDHVPFTGPALSSALLFDA 311
Query: 238 VWSVALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVA 280
V++V A+++ +S+++ K L+ + + + +GLTG +EF ++
Sbjct: 312 VYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQR 371
Query: 281 PAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGW 340
+ +I+ ++++G W G S +D + S++ D +F
Sbjct: 372 SNYALKILQFTRNGFQQIGQWHVAEGLS---MDSRLYASNISD--SLF------------ 414
Query: 341 TLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI 400
+ L + + + + + + E+ + GF +++ K L E L F +
Sbjct: 415 -----NTTLVVTTILENPYLM-LKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLV 468
Query: 401 -------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPV 452
P NG++ +V +L V + I A R + DF+ P+ G+ +++ V
Sbjct: 469 GDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRV 528
Query: 453 QKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL PF+ VW+ + + + V++L+ R
Sbjct: 529 HMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVAR 567
Score = 80 (33.2 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E + +++ L AI
Sbjct: 618 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAI 665
Score = 71 (30.1 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 719 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 777
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 778 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 829
>RGD|2734 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=TAS] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISO]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=TAS] [GO:0042734 "presynaptic membrane" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2734 GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 175 (66.7 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 114/520 (21%), Positives = 225/520 (43%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHPSNTDISV-- 148
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L +
Sbjct: 149 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDTRDP--T 201
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT--S 181
L++++ + ++H + ++ + KA ++ M+ Y +I FT+L S+ S
Sbjct: 202 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYI----FTNLEFSLQRMDS 257
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP--G-ALA-VQTYDA 237
+ ILG S F + FQ+F + + + +E+ +H P G AL+ +DA
Sbjct: 258 LVDDRVNILGF-SIFNQSHAFFQEFSQSLNQSW-----QENCDHVPFTGPALSSALLFDA 311
Query: 238 VWSVALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVA 280
V++V A+++ +S+++ K L+ + + + +GLTG +EF ++
Sbjct: 312 VYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQR 371
Query: 281 PAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGW 340
+ +I+ +R++G W G S +D + S++ D +F T
Sbjct: 372 SNYALKILQFTRNGFRQIGQWHVAEGLS---MDSRLYASNISD--SLF------NTTLVV 420
Query: 341 TLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI 400
T ++ L + G+ N Y+ GF +++ K L E L F +
Sbjct: 421 TTILENPYLMLK---GNHQDMEGNDRYE---------GFCVDMLKELAEILRFNYKIRLV 468
Query: 401 -------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPV 452
P NG++ +V +L V + I A R + DF+ P+ G+ +++ V
Sbjct: 469 GDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRV 528
Query: 453 QKSGNKTLLF--LKPFTRAVWILVAVISIYNGFVVWLIER 490
G + F L PF+ VW+ + + + V++L+ R
Sbjct: 529 HM-GRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLFLVAR 567
Score = 80 (33.2 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E + +++ L AI
Sbjct: 618 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAI 665
Score = 71 (30.1 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 719 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 777
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 778 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 829
>UNIPROTKB|Q01812 [details] [associations]
symbol:Grik4 "Glutamate receptor ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2734
GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 175 (66.7 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 114/520 (21%), Positives = 225/520 (43%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHPSNTDISV-- 148
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L +
Sbjct: 149 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDTRDP--T 201
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT--S 181
L++++ + ++H + ++ + KA ++ M+ Y +I FT+L S+ S
Sbjct: 202 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYI----FTNLEFSLQRMDS 257
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP--G-ALA-VQTYDA 237
+ ILG S F + FQ+F + + + +E+ +H P G AL+ +DA
Sbjct: 258 LVDDRVNILGF-SIFNQSHAFFQEFSQSLNQSW-----QENCDHVPFTGPALSSALLFDA 311
Query: 238 VWSVALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVA 280
V++V A+++ +S+++ K L+ + + + +GLTG +EF ++
Sbjct: 312 VYAVVTAVQELNRSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQR 371
Query: 281 PAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGW 340
+ +I+ +R++G W G S +D + S++ D +F T
Sbjct: 372 SNYALKILQFTRNGFRQIGQWHVAEGLS---MDSRLYASNISD--SLF------NTTLVV 420
Query: 341 TLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI 400
T ++ L + G+ N Y+ GF +++ K L E L F +
Sbjct: 421 TTILENPYLMLK---GNHQDMEGNDRYE---------GFCVDMLKELAEILRFNYKIRLV 468
Query: 401 -------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPV 452
P NG++ +V +L V + I A R + DF+ P+ G+ +++ V
Sbjct: 469 GDGVYGVPEANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRV 528
Query: 453 QKSGNKTLLF--LKPFTRAVWILVAVISIYNGFVVWLIER 490
G + F L PF+ VW+ + + + V++L+ R
Sbjct: 529 HM-GRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLFLVAR 567
Score = 80 (33.2 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E + +++ L AI
Sbjct: 618 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAI 665
Score = 71 (30.1 bits), Expect = 3.8e-15, Sum P(3) = 3.8e-15
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 719 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 777
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 778 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 829
>FB|FBgn0028422 [details] [associations]
symbol:GluRIID "Glutamate receptor IID" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS;IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA;IC;ISS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0043179
"rhythmic excitation" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:1900073 "regulation of neuromuscular
synaptic transmission" evidence=IC] [GO:0045211 "postsynaptic
membrane" evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0007274 InterPro:IPR001828 GO:GO:0043179
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 OMA:IRFSENE
GO:GO:0015277 HSSP:P19491 EMBL:AY768536 EMBL:AY768537 EMBL:AJ251888
EMBL:AJ251889 RefSeq:NP_651982.1 UniGene:Dm.3353 SMR:Q9TVI0
STRING:Q9TVI0 EnsemblMetazoa:FBtr0083938 GeneID:44483
KEGG:dme:Dmel_CG18039 UCSC:CG18039-RA CTD:44483 FlyBase:FBgn0028422
InParanoid:Q9TVI0 OrthoDB:EOG4Z613H GenomeRNAi:44483 NextBio:837310
Uniprot:Q9TVI0
Length = 902
Score = 195 (73.7 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 132/610 (21%), Positives = 233/610 (38%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLA 62
LM S V A+ GP S + K IP F +W + F L S +A
Sbjct: 88 LMQSG-VGAVFGPAARHTASHLLNACDSKDIP---FIYPHLSWGSNPDGFNLHPSPEDIA 143
Query: 63 QMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRL 122
A+ IV +EW + YE + IL HL G +I V+ +
Sbjct: 144 N--ALYDIVNQFEWSRFIFCYESAEYLK--ILDHLMTRYGIKGP-VIKVMRYDLNLNGNY 198
Query: 123 SEELEKL-KGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTS 181
L ++ K R+ VV + +A L +A ++ +M +DY +I + +H+ +
Sbjct: 199 KSVLRRIRKSEDSRIVVVGSTTGVA-ELLRQAQQVGIMNEDYTYIIGNLN---LHTFDLE 254
Query: 182 SIS-SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWS 240
S I G+R P D+ + +D ++ + G P + TYDAV
Sbjct: 255 EYKYSEANITGIRMFSP-DQEEVRDLMEKLHQELGESEPVNSGSTFITMEMALTYDAVRV 313
Query: 241 VALAMEQ---KSEKLN---------------QKLLRRILLSDFDGLTGKVEFMNQKVAPA 282
+A + + + LN + +R + + + +TG++ F V
Sbjct: 314 IAETTKHLPYQPQMLNCSERHDNVQPDGSTFRNYMRSLEIKE-KTITGRIYFEGN-VRKG 371
Query: 283 HTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTL 342
T+ +I L ++G W G F N + + D V + T
Sbjct: 372 FTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFNDIDDGSLVNKTFIVLISVA--TK 429
Query: 343 PAKDQPLRIGVPIGS-EFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIP 401
P I IG+ +FQ Y V D ++ GF+ F+ + Y +N
Sbjct: 430 PYASLVESIDTLIGNNQFQGY-GV--DLIKELADKLGFNFT-FR---DGGNDYGSFN--K 480
Query: 402 FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIF-PVQKSGNKTL 460
S ++K++ + D+ I + R + DF+ P+ G+ +++ QK+
Sbjct: 481 TTNSTSGMLKEIVEGRADLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALF 540
Query: 461 LFLKPFTRAVWILVAVISIYNGFVVWLIER-------NHWP------ELTGSALHQTGTF 507
F+ PF+ VW+ + + + ++I R N +P EL +
Sbjct: 541 SFMDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLW 600
Query: 508 FWLSFNLH-GEKLHSN-LSRMT-TLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIET 564
F L G ++ LS T + +W F L++ +YTANL + LT +N+++
Sbjct: 601 FTTGALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKD 660
Query: 565 LQSSNAIIGY 574
L + + Y
Sbjct: 661 LADNKDDVQY 670
Score = 82 (33.9 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 34/124 (27%), Positives = 50/124 (40%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
+KS A +E + + C T G G G A K P +ALL++
Sbjct: 715 VKSGTKYAFLMESTSIEFNTVRECN-LTKVGDPLDEKGYGIAMVKNWPYRDKFNKALLEL 773
Query: 645 SESGKLRELETSM---IASEKCMEVNLHDDDDISSLSP---SGFWVLFVLSGGISTIALV 698
E G L L+ + + C + DDD S L SG +V+ V+ G I +I +
Sbjct: 774 QEQGVLARLKNKWWNEVGAGVCSAKS--DDDGPSELGVDNLSGIYVVLVI-GSIISIIIS 830
Query: 699 IFLW 702
I W
Sbjct: 831 ILCW 834
>MGI|MGI:95814 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO;IC] [GO:0014054 "positive regulation of
gamma-aminobutyric acid secretion" evidence=IMP] [GO:0015277
"kainate selective glutamate receptor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=IMP] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=ISO] [GO:0032230
"positive regulation of synaptic transmission, GABAergic"
evidence=ISO;IMP] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IPI] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IGI;IMP] [GO:0042391
"regulation of membrane potential" evidence=IDA;IMP] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=ISO;TAS] [GO:0048266 "behavioral
response to pain" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=IMP] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95814 GO:GO:0051967
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:X66118
EMBL:U31444 IPI:IPI00122550 PIR:A41053 UniGene:Mm.5134
ProteinModelPortal:Q60934 SMR:Q60934 STRING:Q60934
PhosphoSite:Q60934 PRIDE:Q60934 UCSC:uc007zuw.2 CleanEx:MM_GRIK1
Genevestigator:Q60934 Uniprot:Q60934
Length = 836
Score = 225 (84.3 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 136/609 (22%), Positives = 246/609 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNRDLFYINLYPDYAAISRAVL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGVMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF-MNQKVAPAH 283
+ VA+A + S+ +L + + I + +DGLTG++ F +
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITFNKTDGLRKDF 388
Query: 284 TYQIINLMGKSYRELGFWTY--GLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGW 340
II+L + ++G W GL +D D N + S+ + + + +
Sbjct: 389 DLDIISLKEEGTEKIGIWNSNSGLNMTDGNRDRSNNITDSLANRTLI----VTTILEEPY 444
Query: 341 TLPAK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNF 399
+ K D+PL G F+ Y D L+ + GF + V+ +P Y
Sbjct: 445 VMYRKSDKPL-YG---NDRFEGYC---LDLLKELSNILGFLYD-----VKLVPDG-KYGA 491
Query: 400 IPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKT 459
G ++ +VK+L + V + I R + DF+ P+ G+ +++ N
Sbjct: 492 QNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNPG 551
Query: 460 LL-FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----P-ELTGSALHQTGTF--- 507
+ FL P + +W+ V + + V+++I R W P + T
Sbjct: 552 VFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNS 611
Query: 508 FWLSFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
FW G +L LS R+ +W F L+I +YTANL + LT +E +++
Sbjct: 612 FWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSA 671
Query: 563 ETLQSSNAI 571
+ L I
Sbjct: 672 DDLAKQTKI 680
>FB|FBgn0046113 [details] [associations]
symbol:GluRIIC "Glutamate receptor IIC" species:7227
"Drosophila melanogaster" [GO:0015277 "kainate selective glutamate
receptor activity" evidence=ISS] [GO:0008066 "glutamate receptor
activity" evidence=NAS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IMP] [GO:0045184 "establishment of protein localization"
evidence=IMP] [GO:0045202 "synapse" evidence=IDA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IC] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:1900073 "regulation of
neuromuscular synaptic transmission" evidence=IC] [GO:0045211
"postsynaptic membrane" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:AE014134 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0031594 GO:GO:0030288 GO:GO:0045184 InterPro:IPR001828
KO:K05313 GO:GO:0005234 GeneTree:ENSGT00700000104113 GO:GO:0015277
FlyBase:FBgn0046113 RefSeq:NP_608557.3 UniGene:Dm.2236
ProteinModelPortal:Q9VPV3 SMR:Q9VPV3 STRING:Q9VPV3
EnsemblMetazoa:FBtr0273244 GeneID:33275 KEGG:dme:Dmel_CG4226
CTD:33275 InParanoid:Q9VPV3 OMA:SILAYKS PhylomeDB:Q9VPV3
GenomeRNAi:33275 NextBio:782802 ArrayExpress:Q9VPV3 Bgee:Q9VPV3
Uniprot:Q9VPV3
Length = 965
Score = 173 (66.0 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 115/504 (22%), Positives = 201/504 (39%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATER--WPFLLQASQN 59
DL+D+ V AI GP + + VA + + IP + F + E+ L
Sbjct: 107 DLIDNG-VAAIFGPSSKAASDIVALVCNSTGIPHIEFDISDEGIQAEKPNHQMTLNLYPA 165
Query: 60 QLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPS 119
Q KA A IVQ++ W + T++Y+ D+ A L L LRE +++ V
Sbjct: 166 QAILSKAYADIVQNFGWRKFTIVYDADDARAAARLQDLLQ-LREVHNDVVRVRKFHKDDD 224
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMM-EKDYIWITT-DAFTSLVHS 177
R+ + K G+ RV V+ + V L + + + + ++I++T + +T +
Sbjct: 225 FRV---MWKSIRGERRV-VLDCEPNMLVELLNSSTEFGLTGQYNHIFLTNLETYTDHLEE 280
Query: 178 INTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQT-YD 236
+ + + I R D P + +R Y D P L +D
Sbjct: 281 LAADNETFAVNITAARLLVNPDPPPYSLPYGYVTQRDNIVYESSD---PPRTLIHDLIHD 337
Query: 237 AVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYR 296
A+ A + S +++ + DF G+ M + +A + ++R
Sbjct: 338 ALQLFAQSWRNASFFYPDRMVVPRITCDFAASGGRTWAMGRYLARLMK-GTSGVNNTNFR 396
Query: 297 E--LGFWTYG--LGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPL-RI 351
L F G + F+ + DP + +G W T + A+ + + R+
Sbjct: 397 TSILQFDEDGQRITFNIEVYDP------LDGIGIAIWDPRGQITQLNVDVKAQKKMIYRV 450
Query: 352 GVPIGSEFQQYVNVEYDELRNFT---YFGGFSIELFKALVEKLPFYLPYNFIPFN----G 404
IG + Y N EL N T + G++++L A+ + F Y F+P G
Sbjct: 451 ATRIGPPYFSY-NETAREL-NLTGNALYQGYAVDLIDAIARHVGF--EYVFVPVADQQYG 506
Query: 405 SYDDLVKQL------YLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
D KQ +NN A + + D+ I R DFT P+ + G+ ++
Sbjct: 507 KLDKETKQWNGIIGEIINNDAHMGICDLTITQARKTAVDFTVPFMQLGVSILAYKSPHVE 566
Query: 458 KTL-LFLKPFTRAVWILVAVISIY 480
KTL +L PF VWI + +IS++
Sbjct: 567 KTLDAYLAPFGGEVWIWI-LISVF 589
Score = 99 (39.9 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 462 FLKPFTRAVWI--LVAV-ISIYNGFVVWLIERNHW---------PELTGSA--LHQTGTF 507
+L PF VWI L++V + + +V I + W PE+ + +H TG
Sbjct: 572 YLAPFGGEVWIWILISVFVMTFLKTIVARISKMDWENPHPCNRDPEVLENQWRIHNTGWL 631
Query: 508 FWLSFNLHGEKL--HSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G + S RM W A++I+ +YTANL + LT+ +E ++ N++ L
Sbjct: 632 TVASIMTAGCDILPRSPQVRMFEATWWIFAIIIANSYTANLAAFLTSSKMEGSIANLKDL 691
Query: 566 QSSNAI 571
+ +
Sbjct: 692 SAQKKV 697
Score = 47 (21.6 bits), Expect = 2.1e-14, Sum P(3) = 2.1e-14
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 626 AFPKGSPLLPSVIEALLKVSESGKLRELE 654
A P G+ ++ A+LK+SE G+L +L+
Sbjct: 786 AVPFGAEYRSNLSVAILKLSERGELYDLK 814
>UNIPROTKB|H0Y2V8 [details] [associations]
symbol:GRIN2C "Glutamate receptor, ionotropic, N-methyl
D-aspartate 2C, isoform CRA_a" species:9606 "Homo sapiens"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:CH471099 EMBL:AC068874
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.436980
HGNC:HGNC:4587 HOVERGEN:HBG052636 HOGENOM:HOG000231061
Ensembl:ENST00000347612 UCSC:uc002jlu.1 Uniprot:H0Y2V8
Length = 873
Score = 140 (54.3 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 53/210 (25%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N G ++ ++ ++Y +G + I
Sbjct: 456 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 516 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 573
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E ++ LT G G WL FN + E S++ LVW
Sbjct: 574 FEYFSPVSYNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 634 FFAVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 94 (38.1 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 709 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 768
Query: 633 LLPSVIEALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLS 689
++ ALL+ G+ ++LET S I + EV + DI +++ F++L V
Sbjct: 769 WKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEV-MSSKLDIDNMA-GVFYMLLVAM 826
Query: 690 GGISTIALVIFLWR--CNWKINENL 712
G +AL++F W WK+ ++
Sbjct: 827 G----LALLVFAWEHLVYWKLRHSV 847
Score = 82 (33.9 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 39/175 (22%), Positives = 80/175 (45%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + V I+ + + +T +VA+I +S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAAHVHGIVF-EDNVDTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + ++DA ++ V+ L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVADA-SHVSWRLLDVVTL 201
Query: 115 ---PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P P +R L +L VFV + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGPRARTQRLLRQL---DAPVFVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 42 (19.8 bits), Expect = 5.1e-10, Sum P(3) = 5.1e-10
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 13 LGPQTSEETSSVAEIASKKQIPVLSF-ADATP----NWATERWPFLLQASQ-NQLAQMKA 66
LGP E+ +VA + S P F A TP + E P + + N + +
Sbjct: 21 LGPGQGEQGMTVAVVFSSSGPPQAQFRARLTPQSFLDLPLEIQPLTVGVNTTNPSSLLTQ 80
Query: 67 IAAIVQSWEWHQVTVIYED-IDSSATG-ILPHLS 98
I ++ + H + ++ED +D+ A IL +S
Sbjct: 81 ICGLLGAAHVHGI--VFEDNVDTEAVAQILDFIS 112
Score = 40 (19.1 bits), Expect = 8.0e-10, Sum P(3) = 8.0e-10
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 336 TPKGWT-LPAKDQPLRIGV 353
TP+ + LP + QPL +GV
Sbjct: 51 TPQSFLDLPLEIQPLTVGV 69
Score = 38 (18.4 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 18/83 (21%), Positives = 32/83 (38%)
Query: 96 HLSDALREAGAEIIHVLALPHFPSSRLSEELEKLKGGQCRVFVVH----LSLELAVHLFE 151
H+ + E + V + F SS+ + + GG V L+L V L +
Sbjct: 89 HVHGIVFEDNVDTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQ 148
Query: 152 KANKMKMMEKDYIWITTDAFTSL 174
+ + + ++Y W TSL
Sbjct: 149 QLQVLFKVLEEYDWSAFAVITSL 171
>UNIPROTKB|E2RFB5 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03000923 Ensembl:ENSCAFT00000007929
Uniprot:E2RFB5
Length = 980
Score = 168 (64.2 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 113/515 (21%), Positives = 219/515 (42%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H +
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHL--DGIVE 259
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
ILG S F D F K ++ D +P A +DAV V A
Sbjct: 260 DTSNILGF-SMFSTDVHSGPHFSPA--KTHSYKHMCTDTCPQPQLSAALMFDAVHVVVSA 316
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 317 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 376
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 377 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 415
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 416 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 472
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 473 APEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 531
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 532 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 566
Score = 77 (32.2 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 737 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 796
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 797 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 828
Score = 71 (30.1 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 617 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 664
>UNIPROTKB|F1NZT2 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0035235
GO:GO:0042734 GO:GO:0032230 GO:GO:0051899 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AADN02010740
EMBL:AADN02010741 IPI:IPI00602891 ProteinModelPortal:F1NZT2
Ensembl:ENSGALT00000025530 Uniprot:F1NZT2
Length = 874
Score = 152 (58.6 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 75/333 (22%), Positives = 138/333 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P + F + + A +A+
Sbjct: 73 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPT-VDHKDAFYINLYPDYAAISRAVL 131
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS L
Sbjct: 132 DLVLYYNWKIVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDARPLL 185
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 186 KEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALDLEPYRYSGVN 245
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQT---YDAVWSV 241
M G + P+ + K +R A P+ + G + + YDAV+ V
Sbjct: 246 -MTGFRLLNIENPQVSSVIE---KWSMERLQAP-PKPETGLLDGMMTTEAALMYDAVYMV 300
Query: 242 ALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF-MNQKVAPAHTYQ 286
A+A ++ S+ + + + I + +DGLTG++ F +
Sbjct: 301 AVASQRASQMTVSSLQCHRHKPWRFGPRFMNLIKEARWDGLTGRITFNKTDGLRKDFDLD 360
Query: 287 IINLMGKSYRELGFW-TY-GLGFSDTIIDPKYN 317
II+L + ++G W +Y GL +D+ D N
Sbjct: 361 IISLKEEGTEKIGVWNSYSGLNMTDSNKDRSTN 393
Score = 81 (33.6 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 524 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 583
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 584 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 643
Query: 566 QSSNAI 571
I
Sbjct: 644 AKQTKI 649
Score = 79 (32.9 bits), Expect = 9.7e-14, Sum P(3) = 9.7e-14
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 703 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 761
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 762 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 817
Query: 711 N 711
N
Sbjct: 818 N 818
Score = 76 (31.8 bits), Expect = 3.1e-13, Sum P(3) = 3.1e-13
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F + G ++ +VK+L + V + I
Sbjct: 429 FEGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTI 488
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 489 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 548
Query: 487 LIER 490
+I R
Sbjct: 549 VIAR 552
Score = 38 (18.4 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 351 IGVPIGSEFQQYVNVEYDELR 371
+G PIGS ++ + + +L+
Sbjct: 735 VGTPIGSPYRDKITIAILQLQ 755
>UNIPROTKB|F1P0E1 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00681402 Ensembl:ENSGALT00000027749 Uniprot:F1P0E1
Length = 819
Score = 107 (42.7 bits), Expect = 1.0e-13, Sum P(5) = 1.0e-13
Identities = 41/122 (33%), Positives = 55/122 (45%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGSPL V A+LK+
Sbjct: 634 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSPLRTPVNLAVLKL 692
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE+G L +L+ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 693 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 752
Query: 703 RC 704
C
Sbjct: 753 FC 754
Score = 80 (33.2 bits), Expect = 1.0e-13, Sum P(5) = 1.0e-13
Identities = 51/239 (21%), Positives = 96/239 (40%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 5 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 57
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSE 124
A+ +++ +EW++ +Y D D + IL + + + ++ + + +F +
Sbjct: 58 -ALLSLLDHYEWNRFVFLY-DTDRGYS-ILQAIMEKAGQNSWQV-SAICVENFNDASYRR 113
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTSSI 183
LE L Q + FV+ +E +L E+ + K Y +I + F +
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 173
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVA 242
+++ G V F P +R++K EYP + P + TYD V +A
Sbjct: 174 ANVTGFQLV--DF--STPMVTKLMQRWKKLDQREYPGSET--PPKYTSALTYDGVLVMA 226
Score = 79 (32.9 bits), Expect = 1.0e-13, Sum P(5) = 1.0e-13
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L V + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 399 WNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 458
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 459 PLAYEIWMCIVFAYIGVSVVLFLVSR 484
Score = 73 (30.8 bits), Expect = 1.0e-13, Sum P(5) = 1.0e-13
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 543 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 584
Score = 55 (24.4 bits), Expect = 1.0e-13, Sum P(5) = 1.0e-13
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 273 GLTGNVQFDHYGRRVNYTMDVFELKNTGPRKVGYW 307
>UNIPROTKB|E1BKL6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IEA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0035249 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:NINSVME GO:GO:0031630 EMBL:DAAA02047229
EMBL:DAAA02047230 EMBL:DAAA02047231 IPI:IPI00838934
Ensembl:ENSBTAT00000015567 Uniprot:E1BKL6
Length = 972
Score = 181 (68.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 115/515 (22%), Positives = 221/515 (42%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H S
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGVVEDS 261
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
S ILG S F P + +F + + E E P A +DAV V A
Sbjct: 262 S--NILGF-SMFNTSHPFYPEFVRSLNMSW-RENCEASTYPGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMK-DLGQVFWPGAPWYTPKGWTLPAKD 346
+ + +RE+G W +S+ + N +++ +L Q TL K
Sbjct: 378 LEKSRQGHREIGVW-----YSNRTL--AMNATTLDINLSQ--------------TLANKT 416
Query: 347 QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI------ 400
L + + + + + L F GF +++ + L E L F +
Sbjct: 417 --LVVTTILENPYVMR-RPNFQALSGNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYG 473
Query: 401 -PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGN 457
P NGS+ +V +L A + V I A R + DF+ P+ G+ +++ V G
Sbjct: 474 APEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM-GR 532
Query: 458 KT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
K FL PF+ AVW+ + + + V++L R
Sbjct: 533 KPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 567
Score = 71 (30.1 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 618 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 665
Score = 59 (25.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 21/92 (22%), Positives = 37/92 (40%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP P AL+ + + L L+ +C + H
Sbjct: 738 TQIGGLLDTKGYGIGMPLGSPPRPITTLALVSGTWNHHLEILKRKWWEGGRCPKEEDHRA 797
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 798 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 829
>UNIPROTKB|Q14957 [details] [associations]
symbol:GRIN2C "Glutamate receptor ionotropic, NMDA 2C"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005737 GO:GO:0014069
GO:GO:0008104 GO:GO:0005887 GO:GO:0009611 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0050885 GO:GO:0060079
DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261 EMBL:AC068874
GO:GO:0042177 DrugBank:DB00145 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565 EMBL:L76224
EMBL:BC140801 IPI:IPI00215887 RefSeq:NP_000826.2 UniGene:Hs.436980
ProteinModelPortal:Q14957 SMR:Q14957 MINT:MINT-1776011
STRING:Q14957 TCDB:1.A.10.1.3 PhosphoSite:Q14957 DMDM:215274091
PaxDb:Q14957 PRIDE:Q14957 Ensembl:ENST00000293190 GeneID:2905
KEGG:hsa:2905 UCSC:uc002jlt.1 CTD:2905 GeneCards:GC17M072854
H-InvDB:HIX0039170 HGNC:HGNC:4587 HPA:HPA041666 MIM:138254
neXtProt:NX_Q14957 PharmGKB:PA28981 HOVERGEN:HBG052636
InParanoid:Q14957 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
PhylomeDB:Q14957 BindingDB:Q14957 ChEMBL:CHEMBL4109 GenomeRNAi:2905
NextBio:11503 ArrayExpress:Q14957 Bgee:Q14957 CleanEx:HS_GRIN2C
Genevestigator:Q14957 GermOnline:ENSG00000161509 Uniprot:Q14957
Length = 1233
Score = 140 (54.3 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 53/210 (25%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N G ++ ++ ++Y +G + I
Sbjct: 456 GFCIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 516 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 573
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E ++ LT G G WL FN + E S++ LVW
Sbjct: 574 FEYFSPVSYNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 634 FFAVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 94 (38.1 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 709 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 768
Query: 633 LLPSVIEALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLS 689
++ ALL+ G+ ++LET S I + EV + DI +++ F++L V
Sbjct: 769 WKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEV-MSSKLDIDNMA-GVFYMLLVAM 826
Query: 690 GGISTIALVIFLWR--CNWKINENL 712
G +AL++F W WK+ ++
Sbjct: 827 G----LALLVFAWEHLVYWKLRHSV 847
Score = 82 (33.9 bits), Expect = 1.5e-13, Sum P(3) = 1.5e-13
Identities = 39/175 (22%), Positives = 80/175 (45%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + V I+ + + +T +VA+I +S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAAHVHGIVF-EDNVDTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + ++DA ++ V+ L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVADA-SHVSWRLLDVVTL 201
Query: 115 ---PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P P +R L +L VFV + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGPRARTQRLLRQL---DAPVFVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 42 (19.8 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 13 LGPQTSEETSSVAEIASKKQIPVLSF-ADATP----NWATERWPFLLQASQ-NQLAQMKA 66
LGP E+ +VA + S P F A TP + E P + + N + +
Sbjct: 21 LGPGQGEQGMTVAVVFSSSGPPQAQFRARLTPQSFLDLPLEIQPLTVGVNTTNPSSLLTQ 80
Query: 67 IAAIVQSWEWHQVTVIYED-IDSSATG-ILPHLS 98
I ++ + H + ++ED +D+ A IL +S
Sbjct: 81 ICGLLGAAHVHGI--VFEDNVDTEAVAQILDFIS 112
Score = 40 (19.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 336 TPKGWT-LPAKDQPLRIGV 353
TP+ + LP + QPL +GV
Sbjct: 51 TPQSFLDLPLEIQPLTVGV 69
Score = 38 (18.4 bits), Expect = 4.3e-09, Sum P(3) = 4.3e-09
Identities = 18/83 (21%), Positives = 32/83 (38%)
Query: 96 HLSDALREAGAEIIHVLALPHFPSSRLSEELEKLKGGQCRVFVVH----LSLELAVHLFE 151
H+ + E + V + F SS+ + + GG V L+L V L +
Sbjct: 89 HVHGIVFEDNVDTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQ 148
Query: 152 KANKMKMMEKDYIWITTDAFTSL 174
+ + + ++Y W TSL
Sbjct: 149 QLQVLFKVLEEYDWSAFAVITSL 171
>ZFIN|ZDB-GENE-030131-6502 [details] [associations]
symbol:grik1a "glutamate receptor, ionotropic,
kainate 1a" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-6502 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 KO:K05201
GeneTree:ENSGT00590000083056 EMBL:AL837524 EMBL:CT573197
EMBL:AL954816 IPI:IPI00611951 RefSeq:XP_001924038.3
UniGene:Dr.14817 UniGene:Dr.155893 ProteinModelPortal:E9QGN5
Ensembl:ENSDART00000147089 GeneID:798001 KEGG:dre:798001 CTD:798001
NextBio:20933239 ArrayExpress:E9QGN5 Bgee:E9QGN5 Uniprot:E9QGN5
Length = 904
Score = 180 (68.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 131/610 (21%), Positives = 250/610 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + +AI
Sbjct: 106 VAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDNFYINLYPEYTSISRAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPS----SR-LS 123
IV ++W VTV+YED +TG++ + + ++ + + + PS SR L
Sbjct: 165 DIVIFYKWKCVTVVYED----STGLM-RMQELIKAPSKNNLKI-RIRQLPSGGGDSRPLL 218
Query: 124 EELEKLKGGQCRVFVVH-LSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINT 180
+E++K K +V+ S ++A L ++ M MM + Y + T D F +
Sbjct: 219 KEMKKEK----EFYVIFDCSYQVAAELLKQLMSMGMMTEYYHFFFTTLDLFALDLEPYRY 274
Query: 181 SSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDA 237
S ++ + R +D K +R A P+ ++ G + A YDA
Sbjct: 275 SGVN----MTAFRLLNLDDSYVASVIQKWSMERQLAP-PKPESGLMSGIMTTAAALMYDA 329
Query: 238 VWSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEFMNQK--VAP 281
V+ VA+A ++ ++ + + + + +DGLTG++ +N+ +
Sbjct: 330 VFMVAVASQRATQMTVSSLQCHRHKPWRYGPRFMNLFKEAQWDGLTGRI-VLNKTDGLRK 388
Query: 282 AHTYQIINLMGKSYRELGFW-TY-GLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKG 339
+I+L ++G W +Y GL ++ I D K S+ + +
Sbjct: 389 EFNLDLISLKEDGTAKIGVWNSYTGLNLTE-IKDNKNITDSLANRTLI----VTTILENP 443
Query: 340 WTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNF 399
+ + K + G F+ Y D L+ + GF+ E+ KL Y
Sbjct: 444 YVMYKKSDKVLYG---NDRFEGYC---LDLLKELSNILGFTYEV------KLVTDGKYGA 491
Query: 400 IPFNGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNK 458
G ++ +V++L +++ A + V + I R + DF+ P+ G+ +++ N
Sbjct: 492 QNDKGEWNGMVREL-IDHIADLAVAPLTITYVREKVIDFSKPFMTLGISILYRKPNGTNP 550
Query: 459 TLL-FLKPFTRAVWILVAVISIYNGFVVWLIER-------NHWP-ELTGSALHQTGTFF- 508
+ FL P T +W+ V + + V+++I R N P + + T
Sbjct: 551 GVFSFLNPLTPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPSSEVVENNFTLLN 610
Query: 509 --WL---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNN 561
W + G +L LS R+ +W F L+I +YTANL + LT ++ +++
Sbjct: 611 SLWFGVAALMRQGSELMPKALSTRILGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDS 670
Query: 562 IETLQSSNAI 571
+ L I
Sbjct: 671 ADDLAKQTRI 680
Score = 83 (34.3 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 29/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP V A+L++ E GKL
Sbjct: 734 ALLMESTSIEYITQRNCN-LTQVGGLIDSKGYGVGTPIGSPYRDKVTIAILQLQEEGKLH 792
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K ++
Sbjct: 793 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSHK 848
Query: 711 N 711
N
Sbjct: 849 N 849
>FB|FBgn0038837 [details] [associations]
symbol:CG3822 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0015277 HSSP:P19491 OrthoDB:EOG4FQZ6P
EMBL:AY119103 ProteinModelPortal:Q8MS48 SMR:Q8MS48 PaxDb:Q8MS48
PRIDE:Q8MS48 FlyBase:FBgn0038837 InParanoid:Q8MS48
ArrayExpress:Q8MS48 Bgee:Q8MS48 Uniprot:Q8MS48
Length = 853
Score = 149 (57.5 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 63/278 (22%), Positives = 116/278 (41%)
Query: 404 GSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIF--PVQKSGNKTLL 461
G ++ ++++L + D+ I R Q DFT P+ G+ +++ P+++ N
Sbjct: 481 GEWNGMIRELLEQRADLAIADLTITFEREQAVDFTTPFMNLGVSILYRKPIKQPPN-LFS 539
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHWPELT---GSALHQTGTFF---WL-- 510
FL P + VWI +A + +++++ + WP T G + T W
Sbjct: 540 FLSPLSLDVWIYMATAYLGVSVLLFILAKFTPYEWPAYTDAHGEKVESQFTLLNCMWFAI 599
Query: 511 -SFNLHG-EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQS 567
S G + L LS RM +W F L++ +YTANL + LT ++ + + E L
Sbjct: 600 GSLMQQGCDFLPKALSTRMVAGIWWFFTLIMISSYTANLAAFLTVERMDSPIESAEDLAK 659
Query: 568 SNAIIGYSRCLGDYASDLKSRKTGAV-----FLEVAEAKIFLAKYCKGFTVAGPTYKVGG 622
I + G A+ + K F+E A +F +G G
Sbjct: 660 QTRIKYGALKGGSTAAFFRDSKISTYQRMWSFMESARPSVFTVSNGEGVERVAK----GK 715
Query: 623 LGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIAS 660
+AF S + V E ++++ G + + ++ IA+
Sbjct: 716 GSYAFLMESTSIEYVTERNCELTQVGGMLDTKSYGIAT 753
Score = 109 (43.4 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 45/172 (26%), Positives = 74/172 (43%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GPQ+S S V I +IP L + ++ R L+ + KA
Sbjct: 93 VAAIFGPQSSHTASHVQSICDNMEIPHL---ENRWDYRLRRESCLVNLYPHPNTLSKAYV 149
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEK 128
IV+ W W T+IYE+ D GI+ L + L+ G + S L++
Sbjct: 150 DIVRHWGWKTFTIIYENND----GIV-RLQELLKAHGMTPFPITVRQLSDSGDYRPLLKQ 204
Query: 129 LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSL-VHSIN 179
+K V+ S E + ++A ++ MM + ++ T SL +H++N
Sbjct: 205 IKNSAEAHIVLDCSTERIHEVLKQAQQIGMMSDYHSYLVT----SLDLHTVN 252
Score = 83 (34.3 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 33/138 (23%), Positives = 56/138 (40%)
Query: 586 KSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVS 645
K + + A +E + + C+ T G G A P SP ++ +LK+
Sbjct: 713 KGKGSYAFLMESTSIEYVTERNCE-LTQVGGMLDTKSYGIATPPNSPYRTAINSVILKLQ 771
Query: 646 ESGKLRELETSMIASE----KCMEVNLHDDDDISSLSPSGFWVLFV-LSGGISTIALVIF 700
E GKL L+T + KC + L + +FV L GG+ +A VI
Sbjct: 772 EEGKLHILKTKWWKEKRGGGKCRVETSKSSSAANELGLANVGGVFVVLMGGMG-VACVIA 830
Query: 701 LWRCNWKINENLLVNKKI 718
+ WK + + V +++
Sbjct: 831 VCEFVWK-SRKVAVEERL 847
Score = 50 (22.7 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 256 LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTY----GLGFSDT 310
L+ + + + GLT ++F +Q I+ L R++G W G+ F+ T
Sbjct: 343 LINYMKIVEMKGLTNVIKFDHQGFRADFMLDIVELTPAGIRKIGTWNSTLPDGINFTRT 401
Score = 42 (19.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 146 AVHLFEKA-NKMKMMEK-DYIWITTDAFTSLVHS---INTSSISSMQGILGV 192
AVHLF KA + + ++ D I+ D ++ H IN I M+G+ V
Sbjct: 307 AVHLFAKALHDLDTSQQIDIHPISCDGQSTWQHGFSLINYMKIVEMKGLTNV 358
Score = 37 (18.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 382 ELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFAGVVGD 424
EL KA PF + + +G Y L+KQ+ + A +V D
Sbjct: 175 ELLKAH-GMTPFPITVRQLSDSGDYRPLLKQIKNSAEAHIVLD 216
>ZFIN|ZDB-GENE-081104-209 [details] [associations]
symbol:si:ch211-264f5.8 "si:ch211-264f5.8"
species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-081104-209 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:CU207217 EMBL:CABZ01071364 EMBL:CABZ01071365
EMBL:CABZ01071366 IPI:IPI00961248 Ensembl:ENSDART00000114472
Uniprot:F1R276
Length = 979
Score = 163 (62.4 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 110/510 (21%), Positives = 221/510 (43%)
Query: 9 VEAILGPQTSEET-SSVAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V +++GP +S + S+V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 64 VVSVIGPASSPASGSTVSHICGEKEIPHIKIGPEETPRLPYLRFASVTLYPSNEDLSL-A 122
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLSE 124
I AI++S+ + ++I + A +L L + +R E + V L + +
Sbjct: 123 IGAILRSFGYPTASLIC----AKAECLL-RLEELVRHFLISRETLSVRMLDE--NLDPTP 175
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + +++ + +KA+++ M Y +I T L+ + ++
Sbjct: 176 LLKEIRDDKVATIIIDANASVSILILKKASELGMTSAFYKYILTTMDFPLLRLDDV--VN 233
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
I+G S P + +F + + E + P + +DAV V A
Sbjct: 234 DQSNIVGF-SMLNNSHPFYLEFIRSLNLSW-REGCDLSPYPGPALSSALMFDAVHVVVGA 291
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 292 VRELNRSQEIGVKPLSCTSSLIWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 351
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPA-KD 346
+ ++E+G W +S+ + N +S+ D+ + K T+ +
Sbjct: 352 LEKFKGGHKEIGVW-----YSNNTL--AMNSTSL-DINT-----SETLANKTLTVTTILE 398
Query: 347 QPLRIGVPIGSEFQ---QYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFN 403
P + +FQ QY D LR FS + LV+ + P P N
Sbjct: 399 NPYVMRKENYQDFQGSDQYEGFCVDMLRELADILKFSFRI--KLVDDGLYGAPE---P-N 452
Query: 404 GSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKT--L 460
GS+ +V +L +N A + V I + R + DF+ P+ G+ +++ V G K
Sbjct: 453 GSWTGMVGEL-INRKADLAVAGFTITSEREKVIDFSKPFMNLGISILYRVH-IGRKPGYF 510
Query: 461 LFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL PF+ AVW+ + + + V++L R
Sbjct: 511 SFLDPFSPAVWLFMLLAYLAVSCVLFLAAR 540
Score = 77 (32.2 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 29/97 (29%), Positives = 42/97 (43%)
Query: 480 YNGFVVWLIERNHWPELTGSALHQTGTFFWL---SFNLHGEKLHSN-LS-RMTTLVWLFV 534
YN F W ER +L + + G W F G ++ LS R + VW
Sbjct: 547 YNPFPCWR-ERR---DLLENQ-YTLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAF 601
Query: 535 ALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
L+I +YTANL + LT + +E + + E L I
Sbjct: 602 TLIIISSYTANLAAFLTVQRMEVPIESAEDLADQTNI 638
Score = 69 (29.3 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 21/93 (22%), Positives = 40/93 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + +L++ E+ +L L+ KC++ H
Sbjct: 711 TQIGGLLDTKGYGIGMPLGSPFRDEITLGILQLQENNRLEILKRRWWEGGKCLKEEDHRA 770
Query: 672 D-DISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 771 KAGLGMDNIGGIFVVLICGLIIAVFVAIMEFVW 803
>FB|FBgn0004620 [details] [associations]
symbol:GluRIIA "Glutamate receptor IIA" species:7227
"Drosophila melanogaster" [GO:0005886 "plasma membrane"
evidence=ISS;IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=IDA;IMP]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:1900075
"positive regulation of neuromuscular synaptic transmission"
evidence=IMP] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IPI] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0046928 "regulation of neurotransmitter
secretion" evidence=IGI] [GO:0060025 "regulation of synaptic
activity" evidence=IMP;IDA] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0014069 EMBL:AE014134
GO:GO:0030054 GO:GO:0045211 GO:GO:0046928 GO:GO:0031594
InterPro:IPR001828 KO:K05313 GO:GO:0005234
GeneTree:ENSGT00700000104113 GO:GO:0015277 HSSP:P19491
GO:GO:0060025 PIR:A39280 FlyBase:FBgn0004620 EMBL:BT010006
RefSeq:NP_523484.2 UniGene:Dm.2601 SMR:Q9VMP4 STRING:Q9VMP4
EnsemblMetazoa:FBtr0079106 GeneID:33788 KEGG:dme:Dmel_CG6992
UCSC:CG6992-RI CTD:33788 InParanoid:Q9VMP4 OMA:DELENIW
GenomeRNAi:33788 NextBio:785261 Uniprot:Q9VMP4
Length = 907
Score = 103 (41.3 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 28/116 (24%), Positives = 55/116 (47%)
Query: 366 EYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSY-------DDLVKQLYLNNF 418
+++ R + G++++L L E + F + + NG Y D ++++L +++
Sbjct: 445 DHENFRGREKYEGYAVDLISKLSELMEFDYEFMIVNGNGKYNPETKQWDGIIRKL-IDHH 503
Query: 419 AGV-VGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWI 472
A + V D+ I R DFT P+ + G+ ++ + FL+PF VWI
Sbjct: 504 AQIGVCDLTITQMRRSVVDFTVPFMQLGISILHYKSPPEPKNQFAFLEPFAVEVWI 559
Score = 98 (39.6 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 32/137 (23%), Positives = 65/137 (47%)
Query: 585 LKSRKTGAVFL-EVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
++ K G FL E + + C T G G A P GS ++ ++L+
Sbjct: 722 VRKEKGGYAFLMETTSLTYNIERNCD-LTQIGEQIGEKHYGLAVPLGSDYRTNLSVSILQ 780
Query: 644 VSESGKLRELETSMIASEK--CMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
+SE G+L++++ + C + D D++S + G V VL+GG+ I +++ +
Sbjct: 781 LSERGELQKMKNKWWKNHNVTCDSYHEVDGDELSIIELGG--VFLVLAGGV-LIGVILGI 837
Query: 702 WRCNWKINENLLVNKKI 718
+ W + +N+ V +++
Sbjct: 838 FEFLWNV-QNVAVEERV 853
Score = 80 (33.2 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
R+ T +W F AL++ TYTANL + LT+ + ++ +++ L
Sbjct: 628 RILTGMWWFFALMMLSTYTANLAAFLTSNKWQSSIKSLQDL 668
Score = 72 (30.4 bits), Expect = 2.9e-13, Sum P(4) = 2.9e-13
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMK 65
S V AI GP + + VA+IA+ IP + + D AT + Q S N +
Sbjct: 90 SNGVAAIFGPSSKAASDIVAQIANATGIPHIEY-DLKLE-ATRQEQLNHQMSINVAPSLS 147
Query: 66 AIAA----IVQS-WEWHQVTVIYE 84
++ I++S +EW T+IYE
Sbjct: 148 VLSRAYFEIIKSNYEWRTFTLIYE 171
>UNIPROTKB|F1N982 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00821478 ProteinModelPortal:F1N982
Ensembl:ENSGALT00000036434 Uniprot:F1N982
Length = 819
Score = 102 (41.0 bits), Expect = 3.5e-13, Sum P(5) = 3.5e-13
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGSPL +V A+LK+
Sbjct: 634 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSPLRNAVNLAVLKL 692
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 693 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 752
Query: 703 RC 704
C
Sbjct: 753 FC 754
Score = 80 (33.2 bits), Expect = 3.5e-13, Sum P(5) = 3.5e-13
Identities = 51/239 (21%), Positives = 96/239 (40%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 5 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 57
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSE 124
A+ +++ +EW++ +Y D D + IL + + + ++ + + +F +
Sbjct: 58 -ALLSLLDHYEWNRFVFLY-DTDRGYS-ILQAIMEKAGQNSWQV-SAICVENFNDASYRR 113
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTSSI 183
LE L Q + FV+ +E +L E+ + K Y +I + F +
Sbjct: 114 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 173
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVA 242
+++ G V F P +R++K EYP + P + TYD V +A
Sbjct: 174 ANVTGFQLV--DF--STPMVTKLMQRWKKLDQREYPGSET--PPKYTSALTYDGVLVMA 226
Score = 79 (32.9 bits), Expect = 3.5e-13, Sum P(5) = 3.5e-13
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L V + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 399 WNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 458
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 459 PLAYEIWMCIVFAYIGVSVVLFLVSR 484
Score = 73 (30.8 bits), Expect = 3.5e-13, Sum P(5) = 3.5e-13
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 543 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 584
Score = 55 (24.4 bits), Expect = 3.5e-13, Sum P(5) = 3.5e-13
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 273 GLTGNVQFDHYGRRVNYTMDVFELKNTGPRKVGYW 307
>RGD|2739 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, N-methyl D-aspartate
2C" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0009611 "response to wounding"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0033058 "directional locomotion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0030288 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905 HOVERGEN:HBG052636
KO:K05211 OrthoDB:EOG42RD6M EMBL:M91563 EMBL:D13212 IPI:IPI00326555
RefSeq:NP_036707.3 UniGene:Rn.9709 ProteinModelPortal:Q00961
SMR:Q00961 IntAct:Q00961 MINT:MINT-87425 STRING:Q00961
PhosphoSite:Q00961 PRIDE:Q00961 Ensembl:ENSRNOT00000004477
GeneID:24411 KEGG:rno:24411 InParanoid:Q00961 BindingDB:Q00961
ChEMBL:CHEMBL401 NextBio:603235 ArrayExpress:Q00961
Genevestigator:Q00961 GermOnline:ENSRNOG00000003280 Uniprot:Q00961
Length = 1237
Score = 138 (53.6 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 50/208 (24%), Positives = 91/208 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N G ++ ++ ++Y +G + I
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISI-YNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+P++ AVW+++ V+ + V++ E
Sbjct: 516 RSEIIDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFE 575
Query: 490 R----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
++ LT G G WL FN + E S++ LVW F
Sbjct: 576 YFSPVSYNQNLTKGKKPGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFF 635
Query: 535 ALVISQTYTANLTSMLTARGLEPTVNNI 562
A++ +YTANL + + TV+ +
Sbjct: 636 AVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 96 (38.9 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 40/145 (27%), Positives = 66/145 (45%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 709 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 768
Query: 633 LLPSVIEALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLS 689
++ ALL++ G+ ++LET S I + EV + DI +++ F++L V
Sbjct: 769 WKRAIDLALLQLLGDGETQKLETVWLSGICQNEKNEV-MSSKLDIDNMA-GVFYMLLVAM 826
Query: 690 GGISTIALVIFLWR--CNWKINENL 712
G +AL++F W WK+ ++
Sbjct: 827 G----LALLVFAWEHLVYWKLRHSV 847
Score = 78 (32.5 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 35/172 (20%), Positives = 77/172 (44%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAE----IASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + +V I+ + + +T +VA+ ++S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAARVHGIVF-EDNVDTEAVAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + ++DA ++ VL L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVADA-SYLSWRLLDVLTL 201
Query: 115 PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P + L+ V V + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 38 (18.4 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVH----LSLELAVHLFEKANKMKMMEKDYIWI 166
V L F SS+ + + GG V L+L V L ++ + + ++Y W
Sbjct: 104 VAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWS 163
Query: 167 TTDAFTSL 174
TSL
Sbjct: 164 AFAVITSL 171
>UNIPROTKB|F1P0E2 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AADN02005016 EMBL:AADN02005017
EMBL:AADN02005018 IPI:IPI00581692 ProteinModelPortal:F1P0E2
Ensembl:ENSGALT00000027747 Uniprot:F1P0E2
Length = 902
Score = 102 (41.0 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGSPL +V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSPLRNAVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 776 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 80 (33.2 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 51/239 (21%), Positives = 96/239 (40%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSE 124
A+ +++ +EW++ +Y D D + IL + + + ++ + + +F +
Sbjct: 141 -ALLSLLDHYEWNRFVFLY-DTDRGYS-ILQAIMEKAGQNSWQV-SAICVENFNDASYRR 196
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTSSI 183
LE L Q + FV+ +E +L E+ + K Y +I + F +
Sbjct: 197 LLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 256
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVA 242
+++ G V F P +R++K EYP + P + TYD V +A
Sbjct: 257 ANVTGFQLV--DF--STPMVTKLMQRWKKLDQREYPGSET--PPKYTSALTYDGVLVMA 309
Score = 79 (32.9 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 22/86 (25%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L V + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 482 WNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 541
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 542 PLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 73 (30.8 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
Score = 55 (24.4 bits), Expect = 6.0e-13, Sum P(5) = 6.0e-13
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 356 GLTGNVQFDHYGRRVNYTMDVFELKNTGPRKVGYW 390
>MGI|MGI:95822 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, NMDA2C (epsilon
3)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=IMP]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0009611
"response to wounding" evidence=IGI] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0033058
"directional locomotion" evidence=IGI] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IGI] [GO:0042391 "regulation of membrane potential"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0060079 "regulation
of excitatory postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95822 GO:GO:0005737
GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905
HOVERGEN:HBG052636 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
EMBL:D10694 IPI:IPI00321321 PIR:I49705 RefSeq:NP_034480.2
UniGene:Mm.39090 ProteinModelPortal:Q01098 SMR:Q01098 IntAct:Q01098
MINT:MINT-104161 STRING:Q01098 PhosphoSite:Q01098 PaxDb:Q01098
PRIDE:Q01098 Ensembl:ENSMUST00000003351 Ensembl:ENSMUST00000106554
GeneID:14813 KEGG:mmu:14813 HOGENOM:HOG000231061 InParanoid:Q01098
BindingDB:Q01098 ChEMBL:CHEMBL3555 NextBio:287007 Bgee:Q01098
Genevestigator:Q01098 GermOnline:ENSMUSG00000020734 Uniprot:Q01098
Length = 1239
Score = 139 (54.0 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 53/210 (25%), Positives = 96/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N G ++ ++ ++Y +G + I
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 516 RSEIIDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 573
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E ++ LT G G WL FN + E S++ LVW
Sbjct: 574 FEYFSPVSYNQNLTKGKKSGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 634 FFAVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 93 (37.8 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 709 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 768
Query: 633 LLPSVIEALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSG 690
++ ALL+ G+ ++LET ++ E N + DI +++ F++L V G
Sbjct: 769 WKRAIDLALLQFLGDGETQKLETVWLSGICHNEKNEVMSSKLDIDNMA-GVFYMLLVAMG 827
Query: 691 GISTIALVIFLWR--CNWKINENL 712
+AL++F W WK+ ++
Sbjct: 828 ----LALLVFAWEHLVYWKLRHSV 847
Score = 78 (32.5 bits), Expect = 6.3e-13, Sum P(3) = 6.3e-13
Identities = 35/172 (20%), Positives = 77/172 (44%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAE----IASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + +V I+ + + +T +VA+ ++S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAARVHGIVF-EDNVDTEAVAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + ++DA ++ VL L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVADA-SYLSWRLLDVLTL 201
Query: 115 PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P + L+ V V + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 41 (19.5 bits), Expect = 3.5e-09, Sum P(3) = 3.5e-09
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 336 TPKGWT-LPAKDQPLRIGV 353
TP+ + LP + QPL IGV
Sbjct: 51 TPQNFLDLPLEIQPLTIGV 69
Score = 38 (18.4 bits), Expect = 7.0e-09, Sum P(3) = 7.0e-09
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVH----LSLELAVHLFEKANKMKMMEKDYIWI 166
V L F SS+ + + GG V L+L V L ++ + + ++Y W
Sbjct: 104 VAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWS 163
Query: 167 TTDAFTSL 174
TSL
Sbjct: 164 AFAVITSL 171
>MGI|MGI:95820 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, NMDA2A (epsilon
1)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001964 "startle response"
evidence=IGI;IMP] [GO:0001975 "response to amphetamine"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity"
evidence=ISO;IMP] [GO:0005262 "calcium channel activity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IGI;IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0007612 "learning" evidence=IMP] [GO:0007613
"memory" evidence=ISO;IMP] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=IDA]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0009611 "response to wounding" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IPI] [GO:0019233
"sensory perception of pain" evidence=IMP] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0030431 "sleep" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033058 "directional locomotion"
evidence=IGI] [GO:0034220 "ion transmembrane transport"
evidence=IMP] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IGI;IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042165 "neurotransmitter binding" evidence=ISO] [GO:0042177
"negative regulation of protein catabolic process" evidence=IGI]
[GO:0042391 "regulation of membrane potential" evidence=IMP]
[GO:0042417 "dopamine metabolic process" evidence=IMP] [GO:0042428
"serotonin metabolic process" evidence=IMP] [GO:0042493 "response
to drug" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISA] [GO:0045202 "synapse"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=ISO] [GO:0048167 "regulation of
synaptic plasticity" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050804 "regulation of
synaptic transmission" evidence=IMP] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051117 "ATPase binding" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051930
"regulation of sensory perception of pain" evidence=IMP]
[GO:0060078 "regulation of postsynaptic membrane potential"
evidence=IMP] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISO;IGI;IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=IMP] [GO:0071230 "cellular
response to amino acid stimulus" evidence=ISO] [GO:0071294
"cellular response to zinc ion" evidence=ISO] [GO:0097110 "scaffold
protein binding" evidence=ISO] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95820
GO:GO:0021987 GO:GO:0021766 GO:GO:0048167 GO:GO:0014069
GO:GO:0009986 GO:GO:0008104 GO:GO:0009611 GO:GO:0071363
GO:GO:0022008 GO:GO:0051592 GO:GO:0042493 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0042220 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0008270
GO:GO:0008542 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0007626 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288
GO:GO:0051707 GO:GO:0043065 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169
GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209 OMA:CRSCLSN
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
EMBL:D10217 IPI:IPI00118380 PIR:S29159 RefSeq:NP_032196.2
UniGene:Mm.2953 ProteinModelPortal:P35436 SMR:P35436 DIP:DIP-31567N
IntAct:P35436 MINT:MINT-103939 STRING:P35436 PhosphoSite:P35436
PaxDb:P35436 PRIDE:P35436 DNASU:14811 Ensembl:ENSMUST00000032331
Ensembl:ENSMUST00000115835 GeneID:14811 KEGG:mmu:14811
UCSC:uc007ydc.1 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
InParanoid:P35436 BindingDB:P35436 ChEMBL:CHEMBL2521 NextBio:286999
Bgee:P35436 Genevestigator:P35436 GermOnline:ENSMUSG00000059003
Uniprot:P35436
Length = 1464
Score = 127 (49.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 458 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 514
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 515 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 574
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 575 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 634
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 635 AFFAVIFLASYTANLAAFM 653
Score = 95 (38.5 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 717 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 776
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 777 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 831
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 832 LITFIWEHLFYWKL 845
Score = 88 (36.0 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 39/176 (22%), Positives = 79/176 (44%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
DLM ++ ++ G T +E + + + I+S+ IP+L ++ P F
Sbjct: 88 DLMSGARIHGLVFGDDTDQEAVAQMLDFISSQTFIPILGIHGGASMIMADKDPTSTFFQF 147
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHV 111
AS Q Q + I+Q ++WH VT I+ + I + ++ G ++ +V
Sbjct: 148 GASIQQ--QATVMLKIMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSF--VGWDMQNV 203
Query: 112 LALP-HFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
+ L F ++ +L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 204 ITLDTSFEDAKTQVQLKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 256
>UNIPROTKB|G3V9C5 [details] [associations]
symbol:Grin2a "RCG49797, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030431 "sleep" evidence=IEA]
[GO:0033058 "directional locomotion" evidence=IEA] [GO:0042177
"negative regulation of protein catabolic process" evidence=IEA]
[GO:0042417 "dopamine metabolic process" evidence=IEA] [GO:0042428
"serotonin metabolic process" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2737 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 CTD:2903 KO:K05209
OMA:CRSCLSN InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 RefSeq:NP_036705.3 UniGene:Rn.9710
GeneID:24409 KEGG:rno:24409 NextBio:603227 EMBL:CH474017
Ensembl:ENSRNOT00000044626 Uniprot:G3V9C5
Length = 1464
Score = 127 (49.8 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 458 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 514
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 515 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 574
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 575 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 634
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 635 AFFAVIFLASYTANLAAFM 653
Score = 95 (38.5 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 717 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 776
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 777 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 831
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 832 LITFIWEHLFYWKL 845
Score = 88 (36.0 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 39/176 (22%), Positives = 79/176 (44%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
DLM ++ ++ G T +E + + + I+S+ IP+L ++ P F
Sbjct: 88 DLMSGARIHGLVFGDDTDQEAVAQMLDFISSQTFIPILGIHGGASMIMADKDPTSTFFQF 147
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHV 111
AS Q Q + I+Q ++WH VT I+ + I + ++ G ++ +V
Sbjct: 148 GASIQQ--QATVMLKIMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSF--VGWDMQNV 203
Query: 112 LALP-HFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
+ L F ++ +L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 204 ITLDTSFEDAKTQVQLKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 256
>UNIPROTKB|B4MU83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7260 "Drosophila willistoni" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH EMBL:CH963852
RefSeq:XP_002064686.1 ProteinModelPortal:B4MU83 STRING:B4MU83
EnsemblMetazoa:FBtr0254355 GeneID:6641663 KEGG:dwi:Dwil_GK23704
FlyBase:FBgn0225666 InParanoid:B4MU83 Uniprot:B4MU83
Length = 982
Score = 132 (51.5 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 48/179 (26%), Positives = 83/179 (46%)
Query: 409 LVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFT 467
L+ QL +V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+
Sbjct: 503 LIGQLVNERADMIVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFS 561
Query: 468 RAVWILVAVISIYNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFN 513
+WILV V V++L++R +H AL+ + F W L+
Sbjct: 562 NTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSG 621
Query: 514 LHGEKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+ GE + S R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 622 I-GEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 679
Score = 88 (36.0 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
SE L +K Q RV++++ S E A +F A M ++ ++WI T+ + + NT
Sbjct: 213 SEHLTYMKTAQSRVYLMYASTEDAQIIFRDARDHNMTQEGHVWIVTE---QALFANNTP- 268
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
+G+LG++ H DK +D
Sbjct: 269 ----EGVLGLQLEHAHSDKGHIRD 288
Score = 84 (34.6 bits), Expect = 1.3e-12, Sum P(3) = 1.3e-12
Identities = 41/168 (24%), Positives = 77/168 (45%)
Query: 541 TYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYA-SDLKSRKTGAVFLEVAE 599
T + M R +E + N T++++N Y+ ++A D+K K A + +
Sbjct: 686 TVKGSSVDMYFRRQVELS-NMYRTMEANN----YATA--EHAIQDVKKGKLMAFIWDSSR 738
Query: 600 AKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMI- 658
+ +K C+ T AG + G G KGSP +V A+L+ ESG + +L+ I
Sbjct: 739 LEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 797
Query: 659 ---ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL-VIF 700
+ C E+ + + + +G ++L ++GG+ I + VI+
Sbjct: 798 HGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIY 844
>UNIPROTKB|J9P9T9 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03006305
EMBL:AAEX03006306 Ensembl:ENSCAFT00000044880 Uniprot:J9P9T9
Length = 1180
Score = 137 (53.3 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 52/210 (24%), Positives = 96/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N G ++ ++ ++Y +G + I
Sbjct: 455 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEE 514
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ +VW+++ V+ + V++
Sbjct: 515 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFM 572
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E ++ LT G G WL FN + E S++ LVW
Sbjct: 573 FEYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWA 632
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 633 FFAVIFLASYTANLAAFMIQEQYIDTVSGL 662
Score = 94 (38.1 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 708 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 767
Query: 633 LLPSVIEALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLS 689
++ ALL+ G+ ++LET S I + EV + DI +++ F++L V
Sbjct: 768 WKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEV-MSSKLDIDNMA-GVFYMLLVAM 825
Query: 690 GGISTIALVIFLWR--CNWKINENL 712
G +AL++F W WK+ ++
Sbjct: 826 G----LALLVFAWEHLVYWKLRHSV 846
Score = 75 (31.5 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 36/172 (20%), Positives = 76/172 (44%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + +V I+ + + T +VA+I +S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAARVHGIVF-EDNVGTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + +DA ++ VL L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAAADA-SYLSWRLLDVLTL 201
Query: 115 PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P + + L+ V V + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGQRAHTQRLLRQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
>UNIPROTKB|E2RG96 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTWRRIS
EMBL:AAEX03006305 EMBL:AAEX03006306 Ensembl:ENSCAFT00000007441
Uniprot:E2RG96
Length = 1220
Score = 137 (53.3 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 52/210 (24%), Positives = 96/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N G ++ ++ ++Y +G + I
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEE 515
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ +VW+++ V+ + V++
Sbjct: 516 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFM 573
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E ++ LT G G WL FN + E S++ LVW
Sbjct: 574 FEYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWA 633
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 634 FFAVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 94 (38.1 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 709 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 768
Query: 633 LLPSVIEALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLS 689
++ ALL+ G+ ++LET S I + EV + DI +++ F++L V
Sbjct: 769 WKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEV-MSSKLDIDNMA-GVFYMLLVAM 826
Query: 690 GGISTIALVIFLWR--CNWKINENL 712
G +AL++F W WK+ ++
Sbjct: 827 G----LALLVFAWEHLVYWKLRHSV 847
Score = 75 (31.5 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
Identities = 36/172 (20%), Positives = 76/172 (44%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + +V I+ + + T +VA+I +S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAARVHGIVF-EDNVGTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + +DA ++ VL L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAAADA-SYLSWRLLDVLTL 201
Query: 115 PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P + + L+ V V + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGQRAHTQRLLRQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
>UNIPROTKB|F1P5Y1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0032590 "dendrite
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0032281 GO:GO:0031623 GO:GO:0032590
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:ARIMQQW EMBL:AADN02028659 EMBL:AADN02028660
IPI:IPI00820450 ProteinModelPortal:F1P5Y1
Ensembl:ENSGALT00000040661 Uniprot:F1P5Y1
Length = 904
Score = 100 (40.3 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 711 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRGPVNLAVLKL 769
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L++ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 770 SEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 829
Query: 703 RC 704
C
Sbjct: 830 FC 831
Score = 82 (33.9 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 471 PDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 530
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 531 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 561
Score = 75 (31.5 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 620 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 678
Query: 590 TGAVF 594
AVF
Sbjct: 679 KIAVF 683
Score = 65 (27.9 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GL+G V+F + +T +I + R++G+W
Sbjct: 348 FEGLSGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 384
Score = 62 (26.9 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 45/210 (21%), Positives = 87/210 (41%)
Query: 42 TPNWATERW-PFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ E F+LQ + +L A+ ++++ + W + IY D D + +L + D
Sbjct: 110 TPSFPVETSNQFVLQL-RPELQD--ALISVIEHYSWQKFVYIY-DADRGLS-VLQKVLDT 164
Query: 101 LREAGAEI--IHVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKM 158
E ++ +++L L +EL+K K R+ VV E + K K++
Sbjct: 165 AAEKNWQVTAVNILTTTEEGYRVLFQELQKKKE---RLVVVDCESERLNIILSKIIKLEK 221
Query: 159 MEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAE 217
Y +I + F + + S +++ G V ++ + P +++R E
Sbjct: 222 NGNGYHYILANMGFMDIDLTKFRESGANVTGFQLV--NYTDTVPA--RIMQQWRNNDARE 277
Query: 218 YPEEDNNHEPGAL-AVQTYDAVWSVALAME 246
P D + TYD V +A A +
Sbjct: 278 LPRVDWKRPKATYTSALTYDGVRVMAEAFQ 307
>UNIPROTKB|P48058 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISS]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISS]
[GO:0006810 "transport" evidence=TAS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0043195 GO:GO:0051968
DrugBank:DB00142 GO:GO:0032281 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:U16129 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 EMBL:BC045546
EMBL:BC142654 EMBL:BC150209 IPI:IPI00007632 IPI:IPI00791228
RefSeq:NP_000820.3 RefSeq:NP_001070711.2 RefSeq:NP_001070712.1
RefSeq:NP_001106283.1 UniGene:Hs.503743 ProteinModelPortal:P48058
SMR:P48058 MINT:MINT-95403 STRING:P48058 PhosphoSite:P48058
DMDM:218512059 PRIDE:P48058 DNASU:2893 Ensembl:ENST00000282499
Ensembl:ENST00000393125 Ensembl:ENST00000428631
Ensembl:ENST00000530497 GeneID:2893 KEGG:hsa:2893 UCSC:uc001pix.2
CTD:2893 GeneCards:GC11P105514 H-InvDB:HIX0026176 HGNC:HGNC:4574
MIM:138246 neXtProt:NX_P48058 PharmGKB:PA28969 InParanoid:P48058
KO:K05200 OMA:RIGYWND OrthoDB:EOG4DBTD0 PhylomeDB:P48058
BindingDB:P48058 ChEMBL:CHEMBL3190 ChiTaRS:GRIA4 GenomeRNAi:2893
NextBio:11443 ArrayExpress:P48058 Bgee:P48058 CleanEx:HS_GRIA4
Genevestigator:P48058 GO:GO:0032983 Uniprot:P48058
Length = 902
Score = 99 (39.9 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRTPVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE+G L +L+ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 776 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 79 (32.9 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 56/241 (23%), Positives = 99/241 (41%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VIKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 A 242
A
Sbjct: 309 A 309
Score = 78 (32.5 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 482 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 541
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 542 PLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 73 (30.8 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
Score = 55 (24.4 bits), Expect = 2.0e-12, Sum P(5) = 2.0e-12
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 356 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 390
>RGD|2737 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, N-methyl D-aspartate
2A" species:10116 "Rattus norvegicus" [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0001964 "startle response"
evidence=ISO] [GO:0001975 "response to amphetamine" evidence=ISO]
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IMP]
[GO:0005261 "cation channel activity" evidence=ISO;IDA] [GO:0005262
"calcium channel activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007611 "learning or memory" evidence=ISO] [GO:0007612 "learning"
evidence=ISO] [GO:0007613 "memory" evidence=ISO;IDA] [GO:0008021
"synaptic vesicle" evidence=ISO] [GO:0008104 "protein localization"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS;IDA]
[GO:0008542 "visual learning" evidence=ISO] [GO:0009416 "response to
light stimulus" evidence=IEP] [GO:0009611 "response to wounding"
evidence=ISO] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010042
"response to manganese ion" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IDA] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016595
"glutamate binding" evidence=IDA;IMP] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IDA] [GO:0019233 "sensory perception of pain"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0021766
"hippocampus development" evidence=IEP] [GO:0021987 "cerebral cortex
development" evidence=IEP] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0022843 "voltage-gated cation channel activity" evidence=IMP]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0030431 "sleep"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033058 "directional locomotion" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IDA] [GO:0035254
"glutamate receptor binding" evidence=IPI] [GO:0040011 "locomotion"
evidence=ISO] [GO:0042165 "neurotransmitter binding" evidence=IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=ISO] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0042417 "dopamine metabolic process" evidence=ISO] [GO:0042428
"serotonin metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP;ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;TAS]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045471
"response to ethanol" evidence=IEP;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IDA] [GO:0050804 "regulation of synaptic
transmission" evidence=ISO] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0051117 "ATPase binding" evidence=IPI]
[GO:0051262 "protein tetramerization" evidence=IDA] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0051930 "regulation of sensory perception of pain"
evidence=ISO] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=ISO;IMP] [GO:0060359
"response to ammonium ion" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0070588 "calcium ion transmembrane
transport" evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0071286 "cellular response to magnesium
ion" evidence=IEP] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:0071294 "cellular response to zinc ion"
evidence=IMP] [GO:0071359 "cellular response to dsRNA" evidence=IEP]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] [GO:0071396 "cellular response to lipid" evidence=IEP]
[GO:0097110 "scaffold protein binding" evidence=IPI] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=IDA] [GO:0050966 "detection of mechanical stimulus involved
in sensory perception of pain" evidence=ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2737 GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009986
GO:GO:0008104 GO:GO:0009611 GO:GO:0071363 GO:GO:0022008 GO:GO:0051592
GO:GO:0042493 GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008270 GO:GO:0008542 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043065 GO:GO:0009416 GO:GO:0010942 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0014075 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595 GO:GO:2000463
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 CTD:2903
HOVERGEN:HBG052635 KO:K05209 OrthoDB:EOG4X0MRG GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 EMBL:M91561
EMBL:D13211 EMBL:AF001423 IPI:IPI00326054 PIR:A43274
RefSeq:NP_036705.3 UniGene:Rn.9710 PDB:2A5S PDB:2A5T PDBsum:2A5S
PDBsum:2A5T ProteinModelPortal:Q00959 SMR:Q00959 DIP:DIP-34031N
IntAct:Q00959 MINT:MINT-93314 STRING:Q00959 TCDB:1.A.10.1.6
PhosphoSite:Q00959 PRIDE:Q00959 GeneID:24409 KEGG:rno:24409
UCSC:RGD:2737 InParanoid:Q00959 BindingDB:Q00959 ChEMBL:CHEMBL310
EvolutionaryTrace:Q00959 NextBio:603227 ArrayExpress:Q00959
Genevestigator:Q00959 GermOnline:ENSRNOG00000033942 Uniprot:Q00959
Length = 1464
Score = 127 (49.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 458 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 514
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 515 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 574
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 575 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 634
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 635 AFFAVIFLASYTANLAAFM 653
Score = 93 (37.8 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 717 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFASTGYGIALQKGSPWKRQID 776
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 777 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 831
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 832 LITFIWEHLFYWKL 845
Score = 88 (36.0 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 39/176 (22%), Positives = 79/176 (44%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
DLM ++ ++ G T +E + + + I+S+ IP+L ++ P F
Sbjct: 88 DLMSGARIHGLVFGDDTDQEAVAQMLDFISSQTFIPILGIHGGASMIMADKDPTSTFFQF 147
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHV 111
AS Q Q + I+Q ++WH VT I+ + I + ++ G ++ +V
Sbjct: 148 GASIQQ--QATVMLKIMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSF--VGWDMQNV 203
Query: 112 LALP-HFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
+ L F ++ +L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 204 ITLDTSFEDAKTQVQLKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 256
>WB|WBGene00003775 [details] [associations]
symbol:nmr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:Z78413
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00540000070221
EMBL:Z81061 GeneID:180002 KEGG:cel:CELE_T01C3.10 CTD:180002
EMBL:AF318614 RefSeq:NP_001256640.1 ProteinModelPortal:G5EEH3
SMR:G5EEH3 EnsemblMetazoa:T01C3.10a WormBase:T01C3.10a OMA:DANCALM
Uniprot:G5EEH3
Length = 990
Score = 122 (48.0 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 43/189 (22%), Positives = 81/189 (42%)
Query: 378 GFSIELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADF 437
GF+ L+K EK + NG ++ L+ L N V + + + R + DF
Sbjct: 533 GFTYTLYKVRDEK------WGLKTENG-WNGLIADLMHNKADMCVTSLKLNSERARDIDF 585
Query: 438 THPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVV-----WLIERNH 492
+ P+ ++G+ +I ++ FL+PF + W+++ + I+ + W+ +
Sbjct: 586 SLPFLDTGISIIVKIRSGVLSPTAFLEPFEYSTWVIILFVCIHVAAISIFLFEWVSPYSF 645
Query: 493 WPELTGSALHQTGTF--FWL------SFNLHGEKLHSNLSRMTTLVWLFVALVISQTYTA 544
+ H+ F +WL S ++ + S +SR+ LVW L YTA
Sbjct: 646 NMQKYPPPEHKFSLFRSYWLVWATLFSASVSTDVPKSTVSRLMALVWAAFGLTFLAVYTA 705
Query: 545 NLTSMLTAR 553
NL + + R
Sbjct: 706 NLAAFMITR 714
Score = 101 (40.6 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 40/175 (22%), Positives = 82/175 (46%)
Query: 28 ASKKQIPVLSF-AD-ATPNWATERWPF-LLQASQNQLAQMKAIAAIVQSWEWHQVTVIYE 84
AS IP++++ AD A + + P+ ++Q + Q +A+ A+++ + W + V+
Sbjct: 143 ASYTGIPIIAWNADNAGFTFENDLGPYRIIQMAPPIEHQARAMLALLRRYNWPKFGVVTS 202
Query: 85 DI---DSSATGILPHLS-DALREAGAEIIHVLALPHFPSSRLSEELEKLKGGQCRVFVVH 140
++ D T I L + + E+IH + + + +L +K Q ++ +++
Sbjct: 203 EMAGNDRFVTAIREELELFSNKSTKFEMIHFSHMNTKNDTDVDLKLADVKKNQAKIILLY 262
Query: 141 LSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSISSMQGILGVRSH 195
+ A +F A KM M+ + Y+WI T S+ + T + G+L V H
Sbjct: 263 ANAAQAGTIFSHAEKMDMIGEKYLWIGTQ---SVKGTQTTVKAPAQAGMLCVNFH 314
Score = 78 (32.5 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 27/93 (29%), Positives = 38/93 (40%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVN 667
C TV G + G G FPK SP V +L+ + G L L+ + C +
Sbjct: 805 CALMTV-GKWASMTGYGIGFPKNSPHTSLVNHYMLQYQQKGDLERLQNFWLTGA-CTP-D 861
Query: 668 LHDDDDISSLSPSGFWVLFVL-SGGISTIALVI 699
H + L F FVL +GGI +V+
Sbjct: 862 SHSQTQSAPLGIENFLSAFVLLAGGIIVSVIVL 894
>UNIPROTKB|F1NAK2 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0030431 "sleep" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042428 "serotonin
metabolic process" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0051930
"regulation of sensory perception of pain" evidence=IEA]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0009986 GO:GO:0008104
GO:GO:0009611 GO:GO:0042493 GO:GO:0045471 GO:GO:0005262
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0042734 GO:GO:0001975 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828
GO:GO:0042428 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:AADN02023472 IPI:IPI00599444
ProteinModelPortal:F1NAK2 Ensembl:ENSGALT00000011793 Uniprot:F1NAK2
Length = 1437
Score = 129 (50.5 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 48/199 (24%), Positives = 88/199 (44%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N N ++ ++ ++ + VG + I
Sbjct: 434 GFCIDILKKLSKTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEE 493
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V++ E
Sbjct: 494 RSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFE 553
Query: 490 --------RN-------HWPELTGSALHQTGTFFW-LSFN--LHGEKLHSNLSRMTTLVW 531
RN H P T + + W L FN + + S++ VW
Sbjct: 554 YFSPVGYNRNLAQGRDPHGPSFT---IGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 610
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 611 AFFAVIFLASYTANLAAFM 629
Score = 94 (38.1 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 693 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 752
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 753 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 807
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 808 LITFVWEHLFYWKL 821
Score = 83 (34.3 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 35/174 (20%), Positives = 76/174 (43%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWPFLLQASQ 58
DLM K+ ++ G T +E + + + I+S+ IP+L ++
Sbjct: 64 DLMSGTKIHGVVFGDDTDQEAVAQILDFISSQTSIPILGIHGGASMIMADKDVMSTFFQF 123
Query: 59 NQLAQMKAIAA--IVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
Q +AI I+Q ++WH VT + I + ++ G ++ +++
Sbjct: 124 GASIQQEAIVMLKIMQDYDWHVFSLVTTTFPGYRDFINVIKTTVENSF--VGWDMQNIII 181
Query: 114 LPH-FPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L F ++ +L+K+ V +++ S + AV++ ++A + + D+ WI
Sbjct: 182 LDTAFGDAKTQIQLKKIHSS---VILLYCSKDEAVYILDEARSLGLTGYDFFWI 232
>ZFIN|ZDB-GENE-070821-5 [details] [associations]
symbol:grik4 "glutamate receptor, ionotropic, kainate
4" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:BX571886 EMBL:BX572079 EMBL:CR626883
EMBL:CU104717 IPI:IPI00505029 Ensembl:ENSDART00000035812
Uniprot:E7F1P4
Length = 965
Score = 150 (57.9 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 108/521 (20%), Positives = 216/521 (41%)
Query: 6 SQKVEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLA 62
S+ V A+LGP S ++S+ + I +K++P + A + R+ L L+ + ++
Sbjct: 88 SKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPEDILKVQFPRFTTLDLRPTNTDIS 147
Query: 63 QMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSS 120
A+A ++ + +I D L +L LR+ E + V L S
Sbjct: 148 M--AVAGLLTFFNSSTSCLICAQADC-----LLNLEVLLRQFLISKETLSVRMLDD--SQ 198
Query: 121 RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINT 180
+ L++++ + +V + ++ + E+A+++ M+ Y +I T SL+ +
Sbjct: 199 DPTPLLKEIRDDKTATIIVDANATMSHVILERASELGMLSVYYTYILTSLEFSLLRLDDL 258
Query: 181 SSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGA----LAVQTYD 236
+ I+G S F P FQDF + + +E+ +H P A + +D
Sbjct: 259 AD--QRVNIVGF-SVFNRTHPFFQDFVLSLNRSW-----QENCDHAPFAGTPLSSALLFD 310
Query: 237 AVWSVALAMEQ--------------KSEKL---NQKLLRRILLSDFDGLTGKVEFMNQKV 279
AV +V A+++ KS K+ L+ + + + +GLTG +EF ++
Sbjct: 311 AVHTVVAAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGHIEFNSKGQ 370
Query: 280 APAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKG 339
+ +I+ R++G W G S ++ K ++ D +F
Sbjct: 371 RSNYALRIMQNSRDGLRQIGQWHSEQGLS---MERKLPSLNVTDT--LF----------- 414
Query: 340 WTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNF 399
+ L I + + + + + EL + GF +++ K L + L F
Sbjct: 415 ------NTTLTITTILENPYVM-LRANHQELEGNDRYEGFCVDMLKELADILKFKYRIRL 467
Query: 400 I-------P-FNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFP 451
+ P NG++ +V +L V + I A R + DF+ P+ G+ +++
Sbjct: 468 VGDGVYGVPGANGTWTGMVGELISRKADLAVAALTITAEREKVIDFSKPFMTLGISIMYR 527
Query: 452 VQKSGNKT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
V G + FL PF+ VW+ + + + V++L+ R
Sbjct: 528 VH-IGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFLVAR 567
Score = 84 (34.6 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 23/75 (30%), Positives = 35/75 (46%)
Query: 502 HQTGTFFWL---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLE 556
+ G FW F G + LS R + VW L+I +YTANL + LT + +E
Sbjct: 591 YSLGNSFWFPVGGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRME 650
Query: 557 PTVNNIETLQSSNAI 571
+ +++ L AI
Sbjct: 651 VPIESVDDLADQTAI 665
Score = 65 (27.9 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 25/112 (22%), Positives = 42/112 (37%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E +L
Sbjct: 719 AYLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPLGSVYRDEFDLAILRLQEENRLE 777
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVI-FLW 702
L+ KC + H + + G +V+ V ++ V+ F+W
Sbjct: 778 ILKRKWWDGGKCPKEEDHRAKGLGMENIGGIFVVLVCGLLVAIFMAVLEFVW 829
>UNIPROTKB|Q12879 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0009611 "response
to wounding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030431
"sleep" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0006810
"transport" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007611 "learning or memory" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0009986 "cell surface"
evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0071363 GO:GO:0022008 GO:GO:0051592 GO:GO:0042493
GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007268 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0008542 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043065
GO:GO:0001508 GO:GO:0009743 GO:GO:0071294 GO:GO:0042177
DrugBank:DB00145 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597 GO:GO:0071230
GO:GO:0071396 DrugBank:DB00836 GO:GO:0001964 DrugBank:DB01043
DrugBank:DB00949 GO:GO:0016595 GO:GO:0071287 GO:GO:0017146
GO:GO:0071286 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 EMBL:U09002 EMBL:U90277
EMBL:AC006531 EMBL:AC007218 EMBL:AC022168 EMBL:AC026423
EMBL:AC133565 EMBL:BC117131 EMBL:BC143273 IPI:IPI00029768
PIR:S47555 RefSeq:NP_000824.1 RefSeq:NP_001127879.1
RefSeq:NP_001127880.1 UniGene:Hs.411472 PDB:3NFL PDBsum:3NFL
ProteinModelPortal:Q12879 SMR:Q12879 MINT:MINT-414776 STRING:Q12879
PhosphoSite:Q12879 DMDM:14285603 PaxDb:Q12879 PRIDE:Q12879
DNASU:2903 Ensembl:ENST00000330684 Ensembl:ENST00000396573
Ensembl:ENST00000396575 Ensembl:ENST00000404927
Ensembl:ENST00000562109 GeneID:2903 KEGG:hsa:2903 UCSC:uc002czo.4
CTD:2903 GeneCards:GC16M009762 HGNC:HGNC:4585 HPA:CAB022725
MIM:138253 MIM:613971 neXtProt:NX_Q12879 Orphanet:289266
PharmGKB:PA28979 HOVERGEN:HBG052635 InParanoid:Q12879 KO:K05209
OMA:CRSCLSN OrthoDB:EOG4X0MRG PhylomeDB:Q12879 BindingDB:Q12879
ChEMBL:CHEMBL1972 EvolutionaryTrace:Q12879 GenomeRNAi:2903
NextBio:11495 ArrayExpress:Q12879 Bgee:Q12879 CleanEx:HS_GRIN2A
Genevestigator:Q12879 GermOnline:ENSG00000183454 GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 Uniprot:Q12879
Length = 1464
Score = 127 (49.8 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 458 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 514
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 515 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 574
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 575 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 634
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 635 AFFAVIFLASYTANLAAFM 653
Score = 95 (38.5 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 717 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 776
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 777 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 831
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 832 LITFIWEHLFYWKL 845
Score = 84 (34.6 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 37/176 (21%), Positives = 78/176 (44%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
DLM ++ ++ G T +E + + + I+S +P+L ++ P F
Sbjct: 88 DLMSGARIHGLVFGDDTDQEAVAQMLDFISSHTFVPILGIHGGASMIMADKDPTSTFFQF 147
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHV 111
AS Q Q + I+Q ++WH VT I+ + + + ++ G ++ +V
Sbjct: 148 GASIQQ--QATVMLKIMQDYDWHVFSLVTTIFPGYREFISFVKTTVDNSF--VGWDMQNV 203
Query: 112 LALP-HFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
+ L F ++ +L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 204 ITLDTSFEDAKTQVQLKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 256
>UNIPROTKB|Q5IS45 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9598 "Pan troglodytes" [GO:0008270 "zinc ion binding"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0009986 GO:GO:0008104
GO:GO:0009611 GO:GO:0022008 GO:GO:0042493 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0035235 GO:GO:0008542 GO:GO:0060079
GO:GO:0042734 GO:GO:0001975 GO:GO:0030288 GO:GO:0043065
GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 EMBL:AY665283 RefSeq:NP_001029361.1
UniGene:Ptr.6230 ProteinModelPortal:Q5IS45 SMR:Q5IS45 STRING:Q5IS45
PRIDE:Q5IS45 GeneID:454396 KEGG:ptr:454396 InParanoid:Q5IS45
NextBio:20836053 Uniprot:Q5IS45
Length = 1464
Score = 127 (49.8 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 458 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 514
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 515 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 574
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 575 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 634
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 635 AFFAVIFLASYTANLAAFM 653
Score = 95 (38.5 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 717 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 776
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 777 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 831
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 832 LITFIWEHLFYWKL 845
Score = 84 (34.6 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 37/176 (21%), Positives = 78/176 (44%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
DLM ++ ++ G T +E + + + I+S +P+L ++ P F
Sbjct: 88 DLMSGARIHGLVFGDDTDQEAVAQMLDFISSHTFVPILGIHGGASMIMNDKDPTSTFFQF 147
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHV 111
AS Q Q + I+Q ++WH VT I+ + + + ++ G ++ +V
Sbjct: 148 GASIQQ--QATVMLKIMQDYDWHVFSLVTTIFPGYREFISFVKTTVDNSF--VGWDMQNV 203
Query: 112 LALP-HFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
+ L F ++ +L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 204 ITLDTSFEDAKTQVQLKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 256
>UNIPROTKB|I3L8N9 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AEMK01190335 EMBL:CU855529
EMBL:CU972413 EMBL:FP312660 Ensembl:ENSSSCT00000027751
Uniprot:I3L8N9
Length = 883
Score = 94 (38.1 bits), Expect = 3.8e-12, Sum P(5) = 3.8e-12
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 698 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRNAVNLAVLKL 756
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 757 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 816
Query: 703 RC 704
C
Sbjct: 817 FC 818
Score = 81 (33.6 bits), Expect = 3.8e-12, Sum P(5) = 3.8e-12
Identities = 56/241 (23%), Positives = 99/241 (41%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 69 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 121
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 122 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 175
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 176 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 235
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 236 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 289
Query: 242 A 242
A
Sbjct: 290 A 290
Score = 78 (32.5 bits), Expect = 3.8e-12, Sum P(5) = 3.8e-12
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 463 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 522
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 523 PLAYEIWMCIVFAYIGVSVVLFLVSR 548
Score = 73 (30.8 bits), Expect = 3.8e-12, Sum P(5) = 3.8e-12
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 607 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 648
Score = 55 (24.4 bits), Expect = 3.8e-12, Sum P(5) = 3.8e-12
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 337 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 371
>UNIPROTKB|F1MP46 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0042177 "negative regulation
of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0050885
GO:GO:0060079 GO:GO:0030288 GO:GO:0005261 GO:GO:0042177
InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTWRRIS EMBL:DAAA02049538
IPI:IPI00999923 Ensembl:ENSBTAT00000015137 Uniprot:F1MP46
Length = 1242
Score = 138 (53.6 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 53/210 (25%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N G ++ ++ ++Y +G + I
Sbjct: 470 GFCIDILKKLARVVRFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 529
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 530 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM 587
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E ++ LT G G WL FN + E S++ LVW
Sbjct: 588 FEYFSPVSYNQNLTSGKRSGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWA 647
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 648 FFAVIFLASYTANLAAFMIQEQYIDTVSGL 677
Score = 94 (38.1 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 40/145 (27%), Positives = 65/145 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 723 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 782
Query: 633 LLPSVIEALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLS 689
++ ALL+ G+ ++LET S I + EV + DI +++ F++L V
Sbjct: 783 WKRAIDLALLQFLGDGETQKLETVWLSGICQNEKNEV-MSSKLDIDNMA-GVFYMLLVAM 840
Query: 690 GGISTIALVIFLWR--CNWKINENL 712
G +AL++F W WK+ ++
Sbjct: 841 G----LALLVFAWEHLVYWKLRHSV 861
Score = 70 (29.7 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 36/172 (20%), Positives = 74/172 (43%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWAT--ERWPFLLQA 56
L+ + +V I+ + + T +VA+I +S+ +P+LS + + T E LQ
Sbjct: 97 LLGAARVHGIVF-EDNVGTEAVAQILDFISSQTHVPILSISGGSAVVLTPKESGSAFLQL 155
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + ++DA ++ VL L
Sbjct: 156 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVTDA-SYLSWRLLDVLTL 214
Query: 115 PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P L+ V V + S E A LF +A + ++ ++W+
Sbjct: 215 ELGPGGARQHTQRLLRQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 266
Score = 39 (18.8 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 336 TPKGWT-LPAKDQPLRIGV 353
TP+ + LP + QPL +G+
Sbjct: 64 TPQSFLDLPLEIQPLSVGI 82
Score = 39 (18.8 bits), Expect = 5.6e-09, Sum P(3) = 5.6e-09
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 117 FPSSRLSEELEKLKGGQCRVFVVHLS----LELAVHLFEKANKMKMMEKDYIWITTDAFT 172
F SS+ + + GG V S L+L V L ++ + + ++Y W T
Sbjct: 123 FISSQTHVPILSISGGSAVVLTPKESGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVIT 182
Query: 173 SL 174
SL
Sbjct: 183 SL 184
>UNIPROTKB|E7ENK3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790860
ProteinModelPortal:E7ENK3 SMR:E7ENK3 Ensembl:ENST00000327783
OMA:KELIDHR ArrayExpress:E7ENK3 Bgee:E7ENK3 Uniprot:E7ENK3
Length = 949
Score = 132 (51.5 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 67/290 (23%), Positives = 122/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG + F
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITF 378
Score = 84 (34.6 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 475 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 534
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 535 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 594
Query: 487 LIER 490
+I R
Sbjct: 595 VIAR 598
Score = 82 (33.9 bits), Expect = 4.5e-12, Sum P(3) = 4.5e-12
Identities = 29/127 (22%), Positives = 54/127 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 749 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 807
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 808 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 863
Query: 711 NLLVNKK 717
N + +K
Sbjct: 864 NNDIEQK 870
Score = 81 (33.6 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 570 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Query: 566 QSSNAI 571
I
Sbjct: 690 AKQTKI 695
>UNIPROTKB|H7BYG7 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 ProteinModelPortal:H7BYG7
SMR:H7BYG7 Ensembl:ENST00000389124 Bgee:H7BYG7 Uniprot:H7BYG7
Length = 871
Score = 132 (51.5 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 67/290 (23%), Positives = 122/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG + F
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITF 378
Score = 84 (34.6 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 475 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 534
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 535 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 594
Query: 487 LIER 490
+I R
Sbjct: 595 VIAR 598
Score = 81 (33.6 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 570 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Query: 566 QSSNAI 571
I
Sbjct: 690 AKQTKI 695
Score = 80 (33.2 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 749 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 807
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 808 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 863
Query: 711 N 711
N
Sbjct: 864 N 864
>FB|FBgn0010399 [details] [associations]
symbol:Nmdar1 "NMDA receptor 1" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA;NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IGI;IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0007616
"long-term memory" evidence=IGI;IMP] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0008306 "associative learning" evidence=IDA]
[GO:0042331 "phototaxis" evidence=IDA] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0050975 "sensory
perception of touch" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0042331 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
GO:GO:0007476 GO:GO:0072375 InterPro:IPR001828 GO:GO:0055074
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
EMBL:X71790 EMBL:AY070577 PIR:S33754 RefSeq:NP_730940.1
UniGene:Dm.3670 HSSP:Q05586 ProteinModelPortal:Q24418 SMR:Q24418
STRING:Q24418 PRIDE:Q24418 EnsemblMetazoa:FBtr0078763 GeneID:40665
KEGG:dme:Dmel_CG2902 UCSC:CG2902-RA CTD:40665 FlyBase:FBgn0010399
HOGENOM:HOG000184780 InParanoid:Q24418 PhylomeDB:Q24418
GenomeRNAi:40665 NextBio:819920 Bgee:Q24418 Uniprot:Q24418
Length = 997
Score = 129 (50.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 644
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Score = 84 (34.6 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + S NT
Sbjct: 224 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFSNNTPD 280
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 281 -----GVLGLQLEHAHSDKGHIRD 299
Score = 83 (34.3 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP +V A+L+
Sbjct: 735 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILE 793
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 794 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 852
Query: 698 -VIF 700
VI+
Sbjct: 853 EVIY 856
Score = 44 (20.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + + G ++Y D++
Sbjct: 335 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSY-----DSM- 388
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP 343
K + D ++ WPG P+G +P
Sbjct: 389 RAKMRMR-IND-SEIIWPGKQRRKPEGIMIP 417
>UNIPROTKB|B3P2E5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7220 "Drosophila erecta" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH954181 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001978937.1
ProteinModelPortal:B3P2E5 EnsemblMetazoa:FBtr0131035 GeneID:6552207
KEGG:der:Dere_GG10981 FlyBase:FBgn0103284 Uniprot:B3P2E5
Length = 997
Score = 129 (50.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 644
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Score = 84 (34.6 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + S NT
Sbjct: 224 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFSNNTPD 280
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 281 -----GVLGLQLEHAHSDKGHIRD 299
Score = 83 (34.3 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP +V A+L+
Sbjct: 735 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILE 793
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 794 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 852
Query: 698 -VIF 700
VI+
Sbjct: 853 EVIY 856
Score = 44 (20.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + + G ++Y D++
Sbjct: 335 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSY-----DSM- 388
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP 343
K + D ++ WPG P+G +P
Sbjct: 389 RAKMRMR-IND-SEIIWPGKQRRKPEGIMIP 417
>UNIPROTKB|B4I414 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7238 "Drosophila sechellia" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH480821 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002038420.1
ProteinModelPortal:B4I414 EnsemblMetazoa:FBtr0193612 GeneID:6613956
KEGG:dse:Dsec_GM10627 FlyBase:FBgn0165573 Uniprot:B4I414
Length = 997
Score = 129 (50.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 644
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Score = 84 (34.6 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + S NT
Sbjct: 224 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFSNNTPD 280
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 281 -----GVLGLQLEHAHSDKGHIRD 299
Score = 83 (34.3 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP +V A+L+
Sbjct: 735 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILE 793
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 794 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 852
Query: 698 -VIF 700
VI+
Sbjct: 853 EVIY 856
Score = 44 (20.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + + G ++Y D++
Sbjct: 335 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSY-----DSM- 388
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP 343
K + D ++ WPG P+G +P
Sbjct: 389 RAKMRMR-IND-SEIIWPGKQRRKPEGIMIP 417
>UNIPROTKB|B4PVB0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7245 "Drosophila yakuba" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
EMBL:CM000160 InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002096067.1 ProteinModelPortal:B4PVB0 STRING:B4PVB0
EnsemblMetazoa:FBtr0271792 GeneID:6535418 KEGG:dya:Dyak_GE25274
FlyBase:FBgn0242356 Uniprot:B4PVB0
Length = 997
Score = 129 (50.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 644
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Score = 84 (34.6 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + S NT
Sbjct: 224 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFSNNTPD 280
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 281 -----GVLGLQLEHAHSDKGHIRD 299
Score = 83 (34.3 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP +V A+L+
Sbjct: 735 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILE 793
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 794 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 852
Query: 698 -VIF 700
VI+
Sbjct: 853 EVIY 856
Score = 44 (20.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + + G ++Y D++
Sbjct: 335 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSY-----DSM- 388
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP 343
K + D ++ WPG P+G +P
Sbjct: 389 RAKMRMR-IND-SEIIWPGKQRRKPEGIMIP 417
>UNIPROTKB|B4QWW7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7240 "Drosophila simulans" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CM000364 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002102226.1
ProteinModelPortal:B4QWW7 EnsemblMetazoa:FBtr0219522 GeneID:6726819
KEGG:dsi:Dsim_GD19612 FlyBase:FBgn0191104 Uniprot:B4QWW7
Length = 997
Score = 129 (50.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 527 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 586 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 644
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 645 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Score = 84 (34.6 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + S NT
Sbjct: 224 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFSNNTPD 280
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 281 -----GVLGLQLEHAHSDKGHIRD 299
Score = 83 (34.3 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP +V A+L+
Sbjct: 735 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILE 793
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 794 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 852
Query: 698 -VIF 700
VI+
Sbjct: 853 EVIY 856
Score = 44 (20.5 bits), Expect = 5.8e-12, Sum P(4) = 5.8e-12
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + + G ++Y D++
Sbjct: 335 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSY-----DSM- 388
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP 343
K + D ++ WPG P+G +P
Sbjct: 389 RAKMRMR-IND-SEIIWPGKQRRKPEGIMIP 417
>UNIPROTKB|G3V164 [details] [associations]
symbol:GRIA4 "Glutamate receptor, ionotrophic, AMPA 4,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471065 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 UniGene:Hs.503743
HGNC:HGNC:4574 ChiTaRS:GRIA4 EMBL:AP001023 SMR:G3V164
Ensembl:ENST00000393127 Ensembl:ENST00000525187 Uniprot:G3V164
Length = 884
Score = 94 (38.1 bits), Expect = 6.0e-12, Sum P(5) = 6.0e-12
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRNAVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 776 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 79 (32.9 bits), Expect = 6.0e-12, Sum P(5) = 6.0e-12
Identities = 56/241 (23%), Positives = 99/241 (41%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VIKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 A 242
A
Sbjct: 309 A 309
Score = 78 (32.5 bits), Expect = 6.0e-12, Sum P(5) = 6.0e-12
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 482 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 541
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 542 PLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 73 (30.8 bits), Expect = 6.0e-12, Sum P(5) = 6.0e-12
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
Score = 55 (24.4 bits), Expect = 6.0e-12, Sum P(5) = 6.0e-12
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 356 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 390
>UNIPROTKB|P39086 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0014054 "positive
regulation of gamma-aminobutyric acid secretion" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IDA] [GO:0051966 "regulation of
synaptic transmission, glutamatergic" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0048266 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0032230 GO:GO:0060080 GO:GO:0007417
GO:GO:0035249 DrugBank:DB00142 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 DrugBank:DB00273 GO:GO:0051966 GO:GO:0016595
eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:L19058
EMBL:U16125 EMBL:AJ249208 IPI:IPI00783047 IPI:IPI00937051
PIR:I58178 RefSeq:NP_000821.1 RefSeq:NP_783300.1 UniGene:Hs.664641
PDB:2ZNS PDB:2ZNT PDB:2ZNU PDB:3FUZ PDB:3FV1 PDB:3FV2 PDB:3FVG
PDB:3FVK PDB:3FVN PDB:3FVO PDBsum:2ZNS PDBsum:2ZNT PDBsum:2ZNU
PDBsum:3FUZ PDBsum:3FV1 PDBsum:3FV2 PDBsum:3FVG PDBsum:3FVK
PDBsum:3FVN PDBsum:3FVO ProteinModelPortal:P39086 SMR:P39086
STRING:P39086 PhosphoSite:P39086 DMDM:729597 PaxDb:P39086
PRIDE:P39086 DNASU:2897 Ensembl:ENST00000389125
Ensembl:ENST00000399907 GeneID:2897 KEGG:hsa:2897 UCSC:uc002ynn.3
UCSC:uc002yno.1 CTD:2897 GeneCards:GC21M030909 HGNC:HGNC:4579
MIM:138245 neXtProt:NX_P39086 PharmGKB:PA28973 KO:K05201
BindingDB:P39086 ChEMBL:CHEMBL1918 EvolutionaryTrace:P39086
GenomeRNAi:2897 NextBio:11463 ArrayExpress:P39086 Bgee:P39086
CleanEx:HS_GRIK1 Genevestigator:P39086 GermOnline:ENSG00000171189
GO:GO:0022843 Uniprot:P39086
Length = 918
Score = 132 (51.5 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 67/290 (23%), Positives = 122/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG + F
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITF 378
Score = 84 (34.6 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 475 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 534
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 535 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 594
Query: 487 LIER 490
+I R
Sbjct: 595 VIAR 598
Score = 81 (33.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 570 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Query: 566 QSSNAI 571
I
Sbjct: 690 AKQTKI 695
Score = 80 (33.2 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 749 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 807
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 808 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 863
Query: 711 N 711
N
Sbjct: 864 N 864
>UNIPROTKB|E9PD61 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792018
ProteinModelPortal:E9PD61 SMR:E9PD61 Ensembl:ENST00000399913
UCSC:uc011acs.2 ArrayExpress:E9PD61 Bgee:E9PD61 Uniprot:E9PD61
Length = 920
Score = 132 (51.5 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 67/290 (23%), Positives = 122/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG + F
Sbjct: 329 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITF 378
Score = 84 (34.6 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 475 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 534
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 535 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 594
Query: 487 LIER 490
+I R
Sbjct: 595 VIAR 598
Score = 81 (33.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 570 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Query: 566 QSSNAI 571
I
Sbjct: 690 AKQTKI 695
Score = 80 (33.2 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 749 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 807
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 808 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 863
Query: 711 N 711
N
Sbjct: 864 N 864
>UNIPROTKB|B4GF83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7234 "Drosophila persimilis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH479182 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002017168.1
ProteinModelPortal:B4GF83 EnsemblMetazoa:FBtr0187775 GeneID:6591341
KEGG:dpe:Dper_GL22160 FlyBase:FBgn0159752 Uniprot:B4GF83
Length = 1004
Score = 129 (50.5 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 539 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 597
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 598 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 656
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 657 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 703
Score = 85 (35.0 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP SV A+L+
Sbjct: 747 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGVGLQKGSPWTDSVTLAILE 805
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 806 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 864
Query: 698 -VIF 700
VI+
Sbjct: 865 EVIY 868
Score = 81 (33.6 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + + NT
Sbjct: 236 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFANNTPD 292
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 293 -----GVLGLQLEHAHSDKGHIRD 311
Score = 44 (20.5 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + G ++Y D++
Sbjct: 347 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFSY-----DSM- 400
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRI 351
K + + D ++ WPG P+G +P + L I
Sbjct: 401 RAKMRMN-IND-SEIIWPGKQNRKPEGIMIPTHLKVLTI 437
>UNIPROTKB|Q296F7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004970
"ionotropic glutamate receptor activity" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007616 "long-term
memory" evidence=ISS] [GO:0008355 "olfactory learning"
evidence=ISS] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISS] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS] [GO:0042391 "regulation
of membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0007616 GO:GO:0042391 EMBL:CM000070 InterPro:IPR001828
GO:GO:0055074 GenomeReviews:CM000070_GR GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HSSP:P19491 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
RefSeq:XP_001359355.1 ProteinModelPortal:Q296F7 GeneID:4802433
KEGG:dpo:Dpse_GA15505 FlyBase:FBgn0075522 InParanoid:Q296F7
Uniprot:Q296F7
Length = 1004
Score = 129 (50.5 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 539 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 597
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 598 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 656
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 657 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 703
Score = 85 (35.0 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP SV A+L+
Sbjct: 747 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGVGLQKGSPWTDSVTLAILE 805
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 806 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 864
Query: 698 -VIF 700
VI+
Sbjct: 865 EVIY 868
Score = 81 (33.6 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + + NT
Sbjct: 236 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFANNTPD 292
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 293 -----GVLGLQLEHAHSDKGHIRD 311
Score = 44 (20.5 bits), Expect = 7.5e-12, Sum P(4) = 7.5e-12
Identities = 22/99 (22%), Positives = 44/99 (44%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + G ++Y D++
Sbjct: 347 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFSY-----DSM- 400
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRI 351
K + + D ++ WPG P+G +P + L I
Sbjct: 401 RAKMRMN-IND-SEIIWPGKQNRKPEGIMIPTHLKVLTI 437
>WB|WBGene00001614 [details] [associations]
symbol:glr-3 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HSSP:P19491 EMBL:Z75545 PIR:T23570 RefSeq:NP_492017.3
UniGene:Cel.19345 ProteinModelPortal:Q21415 SMR:Q21415
EnsemblMetazoa:K10D3.1 GeneID:172449 KEGG:cel:CELE_K10D3.1
UCSC:K10D3.1 CTD:172449 WormBase:K10D3.1 InParanoid:Q21415
OMA:RIVINIP NextBio:875561 ArrayExpress:Q21415 Uniprot:Q21415
Length = 836
Score = 109 (43.4 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 469 AVWILVAVISIYNGFVVWLIERNHWPELTGSALHQTGTFFWLSFNLHGEKL--HSNLSRM 526
A+WI +A IS Y F + P +L + F S G +L + +R+
Sbjct: 539 AIWI-IAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLMQQGSELCPRAASTRL 597
Query: 527 TTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
T +W F AL++ +YTANL ++LT R +E + N + L + I
Sbjct: 598 LTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDLAAQTKI 642
Score = 95 (38.5 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 30/111 (27%), Positives = 51/111 (45%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + + + C+ + G G G PKGSP + A+L++ E +L
Sbjct: 695 AYLMESSMLEYAVERDCELMQIGG-LIDQKGYGIGLPKGSPYRELISTAILRLQEKTELT 753
Query: 652 ELETSMIASEK--CMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIF 700
EL+ + C + D DD S+ G +++ V+ G + T LVIF
Sbjct: 754 ELKEKWWKDKSVVCEQPKRKDQDDGESIG--GIFIILVV-GLVLTAVLVIF 801
Score = 91 (37.1 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 45/183 (24%), Positives = 79/183 (43%)
Query: 24 VAEIASKKQIPVLSFADATPNW-ATERWPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVI 82
V IA +P +S + P +T P L N A+ A+AA ++ +W V V+
Sbjct: 102 VQSIADNTNVPCVSLHLSPPTRPSTHLHPHL-----N--AKSLAVAAFIKREKWKDVVVV 154
Query: 83 YEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEKLKGGQCRV-FVVHL 141
+E+ D I ++ + + ++ L H EL+ +K R V+++
Sbjct: 155 FEEPDELLE-ITDMITAGHFDPDSFSSQLVRLKH--GDDYGNELKHIKNKLDRYRIVINI 211
Query: 142 SLELAVHLFEKANKMKM--MEKDYIWITTDAFT---SLVHSINTSSISSMQGILGVRSHF 196
L+ A+H E+A M M + Y+ + D T + I +I+S G+ V S +
Sbjct: 212 PLQKALHFLEQAANMSMCGVLYHYVVMDMDLVTVDIDSIRGIEDCNITSF-GVHDVNSEY 270
Query: 197 PED 199
ED
Sbjct: 271 IED 273
Score = 87 (35.7 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG + +V +L + V + I R + DFT PY G+ ++F + +
Sbjct: 457 NGKWSGMVGELQRGDADLAVASLTISYGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFK 516
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P + VWI+ +W+I +
Sbjct: 517 FMDPLSTQVWIMTFASYFVVSVAIWIIAK 545
Score = 41 (19.5 bits), Expect = 8.9e-12, Sum P(4) = 8.9e-12
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 405 SYDDLVKQLYLNNFAGVVGDV 425
S D+ K+ + N AG+ GD+
Sbjct: 326 SGSDIKKRFFENPLAGISGDL 346
>UNIPROTKB|F1M526 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951061
ProteinModelPortal:F1M526 Ensembl:ENSRNOT00000067570
ArrayExpress:F1M526 Uniprot:F1M526
Length = 832
Score = 130 (50.8 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 69/291 (23%), Positives = 126/291 (43%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 176
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 177 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 236
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 237 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 288
Query: 238 VWSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
V+ VA+A + S+ +L + + I + +DGLTG++ F
Sbjct: 289 VYMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITF 339
Score = 84 (34.6 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 436 FEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 495
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 496 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 555
Query: 487 LIER 490
+I R
Sbjct: 556 VIAR 559
Score = 81 (33.6 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 531 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 590
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 591 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 650
Query: 566 QSSNAI 571
I
Sbjct: 651 AKQTKI 656
Score = 79 (32.9 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 710 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 768
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 769 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 824
Query: 711 N 711
N
Sbjct: 825 N 825
>UNIPROTKB|F1RGG5 [details] [associations]
symbol:F1RGG5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508 Pfam:PF00060
PRINTS:PR00177 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:FP102936 Ensembl:ENSSSCT00000003374 OMA:SANIWSH
Uniprot:F1RGG5
Length = 981
Score = 140 (54.3 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 70/314 (22%), Positives = 142/314 (45%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V ++LGP +S ++S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-HVLALPHFPSSR-LSE 124
++ I++S+ + ++I + A +L L + +R G I L++ SR +
Sbjct: 149 VSRILKSFNYPSASLIC----AKAECLL-RLEELVR--GFLISKETLSVRMLDDSRDPTP 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L++++ + ++ + ++ + KA+++ M Y +I T ++H S
Sbjct: 202 LLKEIRDDKVSTIIIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVEDS 261
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALA 244
S ILG S F P + +F + + E + P A +DAV V A
Sbjct: 262 S--NILGF-SMFNTSHPFYPEFVRSLNMSW-RENCDASTYPGPALSAALMFDAVHVVVSA 317
Query: 245 MEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
+ + +S+++ K L+ + + ++DGLTG+VEF ++ +T +I
Sbjct: 318 VRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLRI 377
Query: 288 INLMGKSYRELGFW 301
+ + +RE+G W
Sbjct: 378 LEKARQGHREIGVW 391
Score = 78 (32.5 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 508 FWLSFNLHGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQS 567
FW F + S L + +L W F ++IS +YTANL + LT + +E V + + L
Sbjct: 609 FWAPFKTFWPQSLSLLD-VGSLRWAFTLIIIS-SYTANLAAFLTVQRMEVPVESADDLAD 666
Query: 568 SNAI 571
I
Sbjct: 667 QTNI 670
Score = 77 (32.2 bits), Expect = 9.2e-12, Sum P(3) = 9.2e-12
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 743 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 802
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 803 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 834
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 351 IGVPIGSEFQQYVNVEYDELR 371
IG+P+GS F+ + + +L+
Sbjct: 756 IGMPLGSPFRDEITLAILQLQ 776
>UNIPROTKB|Q38PU5 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISS] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
GO:GO:0032983 EMBL:DQ159932 ProteinModelPortal:Q38PU5 SMR:Q38PU5
Uniprot:Q38PU5
Length = 902
Score = 91 (37.1 bits), Expect = 1.4e-11, Sum P(5) = 1.4e-11
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLGNAVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 776 NEPGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 79 (32.9 bits), Expect = 1.4e-11, Sum P(5) = 1.4e-11
Identities = 56/241 (23%), Positives = 99/241 (41%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VIKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 A 242
A
Sbjct: 309 A 309
Score = 78 (32.5 bits), Expect = 1.4e-11, Sum P(5) = 1.4e-11
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 482 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 541
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 542 PLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 73 (30.8 bits), Expect = 1.4e-11, Sum P(5) = 1.4e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
Score = 55 (24.4 bits), Expect = 1.4e-11, Sum P(5) = 1.4e-11
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 356 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 390
>FB|FBgn0053513 [details] [associations]
symbol:Nmdar2 "NMDA receptor 2" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IDA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IPI] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IGI;IMP]
[GO:0050975 "sensory perception of touch" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 EMBL:AE014298
GO:GO:0007616 GO:GO:0030288 GO:GO:0072375 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221 KO:K05210
UniGene:Dm.14391 GeneID:31107 KEGG:dme:Dmel_CG33513 CTD:31107
FlyBase:FBgn0053513 GenomeRNAi:31107 NextBio:771978 EMBL:AY616148
RefSeq:NP_001014714.1 SMR:Q9W581 STRING:Q9W581
EnsemblMetazoa:FBtr0070288 UCSC:CG33513-RC InParanoid:Q9W581
OMA:VAEMQEH Uniprot:Q9W581
Length = 1083
Score = 113 (44.8 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 34/149 (22%), Positives = 69/149 (46%)
Query: 355 IGSEFQQYVNVEYDEL-RNFTYF---GGFSIELFKALVEKLPFYLPYNFIPF-------- 402
+ ++ + +++ + RN +++ GF I+L + E+L F Y +
Sbjct: 538 VAADHEMAADIDVGQAHRNESFYQCCSGFCIDLLEKFAEELGF--TYELVRVEDGKWGTL 595
Query: 403 -NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL 461
NG ++ L+ L V+ + I R DF+ P+ E+G+ ++ +
Sbjct: 596 ENGKWNGLIADLVNRKTDMVLTSLMINTEREAVVDFSEPFMETGIAIVVAKRTGIISPTA 655
Query: 462 FLKPFTRAVWILVAVISIYNG-FVVWLIE 489
FL+PF A W+LV +++I F+++L E
Sbjct: 656 FLEPFDTASWMLVGIVAIQAATFMIFLFE 684
Score = 103 (41.3 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 43/176 (24%), Positives = 84/176 (47%)
Query: 26 EIASKKQIPVLSF-ADATP-NWATERWPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIY 83
++A IPV+S+ AD + + LQ + + Q A+ +I++ ++WHQ +V+
Sbjct: 200 QLAGYLGIPVISWNADNSGLERRASQSTLQLQLAPSIEHQSAAMLSILERYKWHQFSVVT 259
Query: 84 EDIDSSATGILPHLSDALREAGAEI---IHVLALPHFPSSRLSEELEKLKGGQCRVFVVH 140
I + A+RE AE+ L +R S+ +E L + RV +++
Sbjct: 260 SQIAGHDDFV-----QAVRERVAEMQEHFKFTILNSIVVTRTSDLME-LVNSEARVMLLY 313
Query: 141 LSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSISSMQGILGVRSHF 196
+ A+ + A +MK+ ++Y+W+ + S++ + S + G+LGV HF
Sbjct: 314 ATQTEAITILRAAEEMKLTGENYVWVVSQ---SVIEKKDAHSQFPV-GMLGV--HF 363
Score = 62 (26.9 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 514 LHGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTAR 553
+H + SR T VW A+V YTANL + + R
Sbjct: 725 VHVDSPRGFTSRFMTNVWALFAVVFLAIYTANLAAFMITR 764
Score = 62 (26.9 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 29/110 (26%), Positives = 42/110 (38%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVN 667
C+ TV G Y + G G AF + S + + LL+ +G L L +
Sbjct: 853 CRLMTV-GSWYAMTGYGLAFSRNSKYVQMFNKRLLEFRANGDLERLRRYWMTGTCRPGKQ 911
Query: 668 LHDDDDISSLSPSGFWVLFVL-SGGISTIALVIFLWRCNWKINENLLVNK 716
H D +L F F+L GI AL++ L +K L K
Sbjct: 912 EHKSSDPLALEQ--FLSAFLLLMAGILLAALLLLLEHVYFKYIRKRLAKK 959
Score = 38 (18.4 bits), Expect = 1.6e-11, Sum P(5) = 1.6e-11
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 323 DLGQVFWPGAPWYTPKGWTLPAK 345
D+ + WPG P+G +P K
Sbjct: 482 DIRDIAWPGNSHAPPQG--VPEK 502
>UNIPROTKB|F8W7X3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01010383
ProteinModelPortal:F8W7X3 SMR:F8W7X3 PRIDE:F8W7X3
Ensembl:ENST00000309434 PhylomeDB:F8W7X3 ArrayExpress:F8W7X3
Bgee:F8W7X3 Uniprot:F8W7X3
Length = 920
Score = 127 (49.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 59/252 (23%), Positives = 108/252 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE 250
+ VA+A + S+
Sbjct: 329 YMVAIASHRASQ 340
Score = 84 (34.6 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 477 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 536
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 537 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 596
Query: 487 LIER 490
+I R
Sbjct: 597 VIAR 600
Score = 81 (33.6 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 572 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 631
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 632 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 691
Query: 566 QSSNAI 571
I
Sbjct: 692 AKQTKI 697
Score = 80 (33.2 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 751 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 809
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 810 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 865
Query: 711 N 711
N
Sbjct: 866 N 866
>UNIPROTKB|F5H1W5 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01013593
ProteinModelPortal:F5H1W5 SMR:F5H1W5 Ensembl:ENST00000535441
ArrayExpress:F5H1W5 Bgee:F5H1W5 Uniprot:F5H1W5
Length = 922
Score = 127 (49.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 59/252 (23%), Positives = 108/252 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +AI
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAIL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 216
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 217 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 276
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 277 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 328
Query: 239 WSVALAMEQKSE 250
+ VA+A + S+
Sbjct: 329 YMVAIASHRASQ 340
Score = 84 (34.6 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 477 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 536
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 537 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 596
Query: 487 LIER 490
+I R
Sbjct: 597 VIAR 600
Score = 81 (33.6 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 572 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 631
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 632 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 691
Query: 566 QSSNAI 571
I
Sbjct: 692 AKQTKI 697
Score = 80 (33.2 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 751 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 809
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D+ + S+L +F VL+ G+ +++ + + +K +
Sbjct: 810 MMKEKWWRGNGCPE---EDNKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 865
Query: 711 N 711
N
Sbjct: 866 N 866
>UNIPROTKB|B3LZ39 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7217 "Drosophila ananassae" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH902617 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 RefSeq:XP_001953330.1
ProteinModelPortal:B3LZ39 STRING:B3LZ39 EnsemblMetazoa:FBtr0122404
GeneID:6500487 KEGG:dan:Dana_GF17704 FlyBase:FBgn0094722
InParanoid:B3LZ39 KO:K05208 OrthoDB:EOG4RXWF5 InterPro:IPR018882
Pfam:PF10562 Uniprot:B3LZ39
Length = 994
Score = 129 (50.5 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 524 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 582
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 583 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 641
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 642 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 688
Score = 83 (34.3 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 584 DLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLK 643
D+K K A + + + +K C+ T AG + G G KGSP +V A+L+
Sbjct: 732 DVKKGKLMAFIWDSSRLEYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILE 790
Query: 644 VSESGKLRELETSMI----ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL 697
ESG + +L+ I + C E+ + + + +G ++L ++GG+ I +
Sbjct: 791 FHESGFMEKLDKQWIFHGHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIII 849
Query: 698 -VIF 700
VI+
Sbjct: 850 EVIY 853
Score = 81 (33.6 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ + + NT
Sbjct: 221 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALFANNTPD 277
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 278 -----GVLGLQLEHAHSDKGHIRD 296
Score = 41 (19.5 bits), Expect = 2.3e-11, Sum P(4) = 2.3e-11
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 326 QVFWPGAPWYTPKGWTLPAKDQPLRI 351
++ WPG P+G +P + L I
Sbjct: 397 EIIWPGKQRRKPEGIMIPTHLKVLTI 422
>RGD|2732 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=IDA] [GO:0022843 "voltage-gated cation
channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=ISO] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=IDA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=ISO;IDA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042391 "regulation of membrane
potential" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043235 "receptor
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal synaptic
plasticity" evidence=IDA] [GO:0048266 "behavioral response to pain"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560
EMBL:M83561 EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402
IPI:IPI00569872 IPI:IPI00951061 IPI:IPI00952320 PIR:S19808
RefSeq:NP_001104584.1 RefSeq:NP_001104587.1 RefSeq:NP_058937.1
UniGene:Rn.10449 PDB:1TXF PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35
PDB:2F36 PDB:2OJT PDB:2PBW PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4
PDB:2WKY PDB:3C31 PDB:3C32 PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36
PDB:3GBA PDB:3GBB PDB:3S2V PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO
PDBsum:1YCJ PDBsum:2F34 PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT
PDBsum:2PBW PDBsum:2QS1 PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4
PDBsum:2WKY PDBsum:3C31 PDBsum:3C32 PDBsum:3C33 PDBsum:3C34
PDBsum:3C35 PDBsum:3C36 PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V
PDBsum:4DLD PDBsum:4E0X ProteinModelPortal:P22756 SMR:P22756
DIP:DIP-29257N STRING:P22756 TCDB:1.A.10.1.5 PhosphoSite:P22756
PRIDE:P22756 GeneID:29559 KEGG:rno:29559 UCSC:RGD:2732
InParanoid:P22756 BindingDB:P22756 ChEMBL:CHEMBL2919
EvolutionaryTrace:P22756 NextBio:609606 ArrayExpress:P22756
Genevestigator:P22756 GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 128 (50.1 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 68/289 (23%), Positives = 123/289 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 215
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 216 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 275
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAVW 239
+ + G R D P +++ +R A P + G + + YDAV+
Sbjct: 276 N----MTGFRK-LNIDNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAVY 329
Query: 240 SVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
VA+A + S+ L + + I + +DGLTG++ F
Sbjct: 330 MVAIASHRASQLTVSSLQCHRHKPCALGPRFMNLIKEARWDGLTGRITF 378
Score = 82 (33.9 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 749 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 807
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 808 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 863
Query: 711 NLLVNKK 717
N V +K
Sbjct: 864 NNDVEQK 870
Score = 81 (33.6 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 570 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Query: 566 QSSNAI 571
I
Sbjct: 690 AKQTKI 695
Score = 78 (32.5 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F + ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 475 FEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 534
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 535 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 594
Query: 487 LIER 490
+I R
Sbjct: 595 VIAR 598
>UNIPROTKB|P22756 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967
GO:GO:0007268 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0030425 GO:GO:0048266 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0032230 GO:GO:0060080
GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828 GO:GO:0048172
GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560 EMBL:M83561
EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402 IPI:IPI00569872
IPI:IPI00951061 IPI:IPI00952320 PIR:S19808 RefSeq:NP_001104584.1
RefSeq:NP_001104587.1 RefSeq:NP_058937.1 UniGene:Rn.10449 PDB:1TXF
PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35 PDB:2F36 PDB:2OJT PDB:2PBW
PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4 PDB:2WKY PDB:3C31 PDB:3C32
PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36 PDB:3GBA PDB:3GBB PDB:3S2V
PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO PDBsum:1YCJ PDBsum:2F34
PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT PDBsum:2PBW PDBsum:2QS1
PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4 PDBsum:2WKY PDBsum:3C31
PDBsum:3C32 PDBsum:3C33 PDBsum:3C34 PDBsum:3C35 PDBsum:3C36
PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V PDBsum:4DLD PDBsum:4E0X
ProteinModelPortal:P22756 SMR:P22756 DIP:DIP-29257N STRING:P22756
TCDB:1.A.10.1.5 PhosphoSite:P22756 PRIDE:P22756 GeneID:29559
KEGG:rno:29559 UCSC:RGD:2732 InParanoid:P22756 BindingDB:P22756
ChEMBL:CHEMBL2919 EvolutionaryTrace:P22756 NextBio:609606
ArrayExpress:P22756 Genevestigator:P22756
GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 128 (50.1 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 68/289 (23%), Positives = 123/289 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 215
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 216 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 275
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAVW 239
+ + G R D P +++ +R A P + G + + YDAV+
Sbjct: 276 N----MTGFRK-LNIDNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAVY 329
Query: 240 SVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
VA+A + S+ L + + I + +DGLTG++ F
Sbjct: 330 MVAIASHRASQLTVSSLQCHRHKPCALGPRFMNLIKEARWDGLTGRITF 378
Score = 82 (33.9 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 749 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 807
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 808 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 863
Query: 711 NLLVNKK 717
N V +K
Sbjct: 864 NNDVEQK 870
Score = 81 (33.6 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 570 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 629
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 630 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 689
Query: 566 QSSNAI 571
I
Sbjct: 690 AKQTKI 695
Score = 78 (32.5 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F + ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 475 FEAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 534
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 535 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 594
Query: 487 LIER 490
+I R
Sbjct: 595 VIAR 598
>ZFIN|ZDB-GENE-070424-129 [details] [associations]
symbol:grin2aa "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, a" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-129
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HOVERGEN:HBG052635 OrthoDB:EOG4X0MRG
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
HOGENOM:HOG000113802 EMBL:CR954963 EMBL:BX908803 IPI:IPI00494319
Ensembl:ENSDART00000073979 Ensembl:ENSDART00000142141
Uniprot:F1QZC7
Length = 1460
Score = 123 (48.4 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 47/202 (23%), Positives = 86/202 (42%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K + + F Y+ ++ NG + + ++ N G VG + I
Sbjct: 455 GFCIDILKKIARNVKF--TYDLYLVTNGKHGKKINNVW-NGMVGEVVNKKAVMAVGSLTI 511
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + + V+
Sbjct: 512 NEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVF 571
Query: 487 LIE--------RN-------HWPELTGSALHQTGTFFW-LSFN--LHGEKLHSNLSRMTT 528
+ E RN H P T + + W L FN + + S+
Sbjct: 572 MFEYISPLGFNRNLAQGKDPHGPSFT---MGKAVWLLWGLVFNNSVPVQNPKGTTSKFIV 628
Query: 529 LVWLFVALVISQTYTANLTSML 550
VW F A++ +YTANL + +
Sbjct: 629 SVWAFFAVIFLASYTANLAAFM 650
Score = 88 (36.0 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 41/181 (22%), Positives = 79/181 (43%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
DLM K+ ++ G T +E + + + I+S+ IP+L + ++ F
Sbjct: 85 DLMSGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQF 144
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDS--SATGILPHLSDALREAGAEIIHVL 112
AS Q A + + I++ ++WH +++ IL D G ++ H++
Sbjct: 145 GASIQQEALL--MLNIMEEYDWHVFSIVTSKFPGYQDFIAILKTTVDN-SFVGWDLQHII 201
Query: 113 ALPHFPS-SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAF 171
L SR +L+K+ Q V +++ S + A ++ E+A + + YIWI
Sbjct: 202 TLDAVDGDSRTQIQLKKV---QSPVVLLYCSKDEAAYILEEARSLGLTGFGYIWIVPSLT 258
Query: 172 T 172
T
Sbjct: 259 T 259
Score = 85 (35.0 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 35/133 (26%), Positives = 61/133 (45%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A KGS V
Sbjct: 714 LVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSLWKRPVD 773
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
A+L + G++ ELE + E N + D+ +++ G + + + G+S I
Sbjct: 774 LAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMA--GVFYMLATAMGLSLIT 831
Query: 697 LV---IFLWRCNW 706
V +F WR +
Sbjct: 832 FVWEHLFYWRLRY 844
Score = 42 (19.8 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 19/77 (24%), Positives = 29/77 (37%)
Query: 603 FLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEK 662
F +C+ P Y G A SP + EA L + G L ++ + E
Sbjct: 1196 FKQTHCRSCLSKVPNYNTGPYAGA---RSPY--NRCEACLHM---GNLYDISEDQMLQEA 1247
Query: 663 CMEVNLHDDDDISSLSP 679
+ ++H DD S P
Sbjct: 1248 MISPSMHHDDMFSHYWP 1264
>UNIPROTKB|J9NV46 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03016479
Ensembl:ENSCAFT00000048687 Uniprot:J9NV46
Length = 849
Score = 124 (48.7 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 64/290 (22%), Positives = 122/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +A+
Sbjct: 33 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAVL 91
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VT++YED +TG++ L + ++ I + + PS + L
Sbjct: 92 DLVLYYNWKTVTLVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 145
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S A + ++ M MM + Y + T D F + S ++
Sbjct: 146 KEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 205
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 206 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 257
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG++ F
Sbjct: 258 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITF 307
Score = 84 (34.6 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 404 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTI 463
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 464 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 523
Query: 487 LIER 490
+I R
Sbjct: 524 VIAR 527
Score = 81 (33.6 bits), Expect = 8.7e-11, Sum P(3) = 8.7e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 499 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 558
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 559 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 618
Query: 566 QSSNAI 571
I
Sbjct: 619 AKQTKI 624
Score = 79 (32.9 bits), Expect = 4.3e-11, Sum P(3) = 4.3e-11
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 678 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 736
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 737 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 792
Query: 711 N 711
N
Sbjct: 793 N 793
>UNIPROTKB|F1M5R4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951831
Ensembl:ENSRNOT00000066006 ArrayExpress:F1M5R4 Uniprot:F1M5R4
Length = 912
Score = 122 (48.0 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 176
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 177 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 236
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 237 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 288
Query: 238 VWSVALAMEQKSE 250
V+ VA+A + S+
Sbjct: 289 VYMVAIASHRASQ 301
Score = 84 (34.6 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 438 FEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 497
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 498 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 557
Query: 487 LIER 490
+I R
Sbjct: 558 VIAR 561
Score = 82 (33.9 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 712 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 770
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 771 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 826
Query: 711 NLLVNKK 717
N V +K
Sbjct: 827 NNDVEQK 833
Score = 81 (33.6 bits), Expect = 9.1e-11, Sum P(3) = 9.1e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 533 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 592
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 593 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 652
Query: 566 QSSNAI 571
I
Sbjct: 653 AKQTKI 658
>UNIPROTKB|F1P9T1 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AAEX03016479
Ensembl:ENSCAFT00000013975 Uniprot:F1P9T1
Length = 879
Score = 124 (48.7 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 64/290 (22%), Positives = 122/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ + F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNKDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VT++YED +TG++ L + ++ I + + PS + L
Sbjct: 124 DLVLYYNWKTVTLVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 177
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S A + ++ M MM + Y + T D F + S ++
Sbjct: 178 KEMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 237
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 238 -MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 289
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG++ F
Sbjct: 290 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGRITF 339
Score = 84 (34.6 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 436 FEGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTI 495
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 496 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 555
Query: 487 LIER 490
+I R
Sbjct: 556 VIAR 559
Score = 81 (33.6 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 531 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 590
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 591 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 650
Query: 566 QSSNAI 571
I
Sbjct: 651 AKQTKI 656
Score = 79 (32.9 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 710 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 768
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 769 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFIYKSRK 824
Query: 711 N 711
N
Sbjct: 825 N 825
>UNIPROTKB|F1M7M9 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0051967 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0048266 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0032230 GO:GO:0060080 GO:GO:0035249
GO:GO:0030534 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 IPI:IPI00231402 GeneTree:ENSGT00590000083056
OMA:KELIDHR ProteinModelPortal:F1M7M9 Ensembl:ENSRNOT00000050073
ArrayExpress:F1M7M9 Uniprot:F1M7M9
Length = 951
Score = 122 (48.0 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 162
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 163 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 215
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 216 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 275
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 276 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 327
Query: 238 VWSVALAMEQKSE 250
V+ VA+A + S+
Sbjct: 328 VYMVAIASHRASQ 340
Score = 84 (34.6 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 477 FEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 536
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 537 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 596
Query: 487 LIER 490
+I R
Sbjct: 597 VIAR 600
Score = 82 (33.9 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 751 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 809
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 810 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 865
Query: 711 NLLVNKK 717
N V +K
Sbjct: 866 NNDVEQK 872
Score = 81 (33.6 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 572 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 631
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 632 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 691
Query: 566 QSSNAI 571
I
Sbjct: 692 AKQTKI 697
>UNIPROTKB|F1NW92 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02028659 EMBL:AADN02028660 IPI:IPI00585053
Ensembl:ENSGALT00000006493 Uniprot:F1NW92
Length = 902
Score = 93 (37.8 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKTWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 80 (33.2 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 60/286 (20%), Positives = 120/286 (41%)
Query: 42 TPNWATERW-PFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ E F+LQ + +L A+ ++++ + W + IY D D + +L + D
Sbjct: 110 TPSFPVETSNQFVLQL-RPELQD--ALISVIEHYSWQKFVYIY-DADRGLS-VLQKVLDT 164
Query: 101 LREAGAEI--IHVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKM 158
E ++ +++L L +EL+K K R+ VV E + K K++
Sbjct: 165 AAEKNWQVTAVNILTTTEEGYRVLFQELQKKKE---RLVVVDCESERLNIILSKIIKLEK 221
Query: 159 MEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAE 217
Y +I + F + + S +++ G V ++ + P +++R E
Sbjct: 222 NGNGYHYILANMGFMDIDLTKFRESGANVTGFQLV--NYTDTVPA--RIMQQWRNNDARE 277
Query: 218 YPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLN-------------------QKL- 256
P D P + TYD V +A A + + ++++ Q +
Sbjct: 278 LPRVDWKR-PKYTSALTYDGVRVMAEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGID 336
Query: 257 LRRILLS-DFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
++R L F+GL+G V+F + +T +I + R++G+W
Sbjct: 337 IQRALQQVRFEGLSGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 75 (31.5 bits), Expect = 6.3e-11, Sum P(4) = 6.3e-11
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
>UNIPROTKB|F1LTY2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00590000083056
IPI:IPI00231400 Ensembl:ENSRNOT00000042581 ArrayExpress:F1LTY2
Uniprot:F1LTY2
Length = 834
Score = 122 (48.0 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 176
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 177 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 236
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 237 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 288
Query: 238 VWSVALAMEQKSE 250
V+ VA+A + S+
Sbjct: 289 VYMVAIASHRASQ 301
Score = 84 (34.6 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 438 FEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 497
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 498 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 557
Query: 487 LIER 490
+I R
Sbjct: 558 VIAR 561
Score = 81 (33.6 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 533 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 592
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 593 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 652
Query: 566 QSSNAI 571
I
Sbjct: 653 AKQTKI 658
Score = 79 (32.9 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 712 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 770
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 771 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 826
Query: 711 N 711
N
Sbjct: 827 N 827
>FB|FBgn0039916 [details] [associations]
symbol:CG9935 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0060025 "regulation
of synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
InterPro:IPR001828 EMBL:AE014135 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0015277 RefSeq:NP_001036250.1 UniGene:Dm.14094
ProteinModelPortal:Q0KIF2 SMR:Q0KIF2 STRING:Q0KIF2 PRIDE:Q0KIF2
EnsemblMetazoa:FBtr0110906 GeneID:43806 KEGG:dme:Dmel_CG9935
UCSC:CG9935-RB FlyBase:FBgn0039916 OMA:MISQIAN OrthoDB:EOG48CZB3
PhylomeDB:Q0KIF2 GenomeRNAi:43806 NextBio:835962 Bgee:Q0KIF2
Uniprot:Q0KIF2
Length = 899
Score = 101 (40.6 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 36/140 (25%), Positives = 61/140 (43%)
Query: 362 YVNVEYDELRNFT---YFGGFSIELFKALVEKLPF-YL----P---YNFI-PFNGSYDDL 409
YV + Y +NFT F GF +++ + + ++ F Y+ P Y P G ++ +
Sbjct: 415 YVMMHYG--KNFTGNERFYGFCVDILETISREVGFDYILDLVPDRKYGAKDPETGEWNGM 472
Query: 410 VKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTR 468
V QL VG + I R DFT P+ G+ ++F V S L F+ P
Sbjct: 473 VAQLMKYKADLAVGSMTITYARESVIDFTKPFMNLGISILFKVPTSEPTRLFSFMNPLAI 532
Query: 469 AVWILVAVISIYNGFVVWLI 488
+WI V + ++++
Sbjct: 533 EIWIYVLIAYFLVSLCIYIV 552
Score = 88 (36.0 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 37/136 (27%), Positives = 53/136 (38%)
Query: 581 YASDLKSRKTG--AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVI 638
Y +K G A +E + + C T G G G A PKGSP +
Sbjct: 692 YEDGIKRVNQGNYAFLMESTMLDYIVQRDCN-LTQIGGLLDTKGYGIATPKGSPWRDKIS 750
Query: 639 EALLKVSESGKLRELETSMIAS--EKCMEVNLHDDDDISSLSPSGFWVLFV-LSGGISTI 695
A+L++ E G ++ L + E C N +SL +FV L GI
Sbjct: 751 LAILELQERGDIQMLYDKWWKNTDETCTRKNTSKQSKANSLGLESIGGVFVVLIAGIIVA 810
Query: 696 ALVIFL--WRCNWKIN 709
A+V F W N++ N
Sbjct: 811 AVVAFFEFWY-NFRYN 825
Score = 87 (35.7 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 496 LTGSALHQTGTFFWLSFNLHGEKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGL 555
LT S GTF S +++ + + R+ + W F +L+I +YTANL + LT +
Sbjct: 579 LTDSFWFTIGTFMQQSPDIYPRAMST---RIISSTWGFFSLIIVASYTANLAAFLTTERM 635
Query: 556 EPTVNNIETLQSSNAI 571
+ N E L S I
Sbjct: 636 INPIENAEDLASQTEI 651
Score = 53 (23.7 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 229 ALAVQTYDAVWSVAL----AMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMN-QKVAPAH 283
A+ +QT + S+ L E+ S L+ + ++ GLTG ++F + Q+V
Sbjct: 306 AIGLQTLEQSHSLTLLNISCEEENSWDGGLSLINYLNAVEWKGLTGPIQFKDGQRVQ--F 363
Query: 284 TYQIINLMGKSYRELGFWT 302
+I L S ++G WT
Sbjct: 364 KLDLIKLKQHSIVKVGEWT 382
>MGI|MGI:95811 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA4 (alpha 4)"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050804 "regulation of
synaptic transmission" evidence=ISO] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95811 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0045202 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2893 KO:K05200 OrthoDB:EOG4DBTD0 ChiTaRS:GRIA4
GO:GO:0032983 EMBL:AB022913 EMBL:AB079073 EMBL:BC060697
IPI:IPI00131471 RefSeq:NP_001106651.1 RefSeq:NP_001106652.1
RefSeq:NP_062665.3 UniGene:Mm.209263 ProteinModelPortal:Q9Z2W8
SMR:Q9Z2W8 IntAct:Q9Z2W8 STRING:Q9Z2W8 PhosphoSite:Q9Z2W8
PaxDb:Q9Z2W8 PRIDE:Q9Z2W8 Ensembl:ENSMUST00000063508 GeneID:14802
KEGG:mmu:14802 UCSC:uc009obo.2 InParanoid:Q9Z2W8 BindingDB:Q9Z2W8
ChEMBL:CHEMBL3615 NextBio:286965 Bgee:Q9Z2W8 CleanEx:MM_GRIA4
Genevestigator:Q9Z2W8 GermOnline:ENSMUSG00000025892 Uniprot:Q9Z2W8
Length = 902
Score = 114 (45.2 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 106/509 (20%), Positives = 201/509 (39%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 ALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGF 300
A + +K++ + RR D L Q + T + + + G + + F
Sbjct: 309 AETFRSLRRQKID--ISRRGNAGDC--LANPAAPWGQGIDMERTLKQVRIQGLT-GNVQF 363
Query: 301 WTYG--LGFSDTIIDPKYN----CSSMKDLGQ-VFWPGAPWYTPKGWTLPAKDQPLRIGV 353
YG + ++ + + K D+ + V AP T T +++ + +
Sbjct: 364 DHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAP--TLGNDTAAIENRTVVVTT 421
Query: 354 PIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD--DLVK 411
+ S + Y ++ + G+ ++L + + + +P +G Y D
Sbjct: 422 IMESPYVMYKK-NHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP-DGKYGARDADT 479
Query: 412 QLYLNNFAG--VVG--DVAIVAR-----RCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+++ N G V G ++AI R + DF+ P+ G+ +MI QKS
Sbjct: 480 KIW-NGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS 538
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FLDPLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 99 (39.9 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRTPVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE+G L +L+ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 776 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 73 (30.8 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
>UNIPROTKB|F1P0S5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 OMA:MVQQFLQ EMBL:AADN02013607
EMBL:AADN02013608 IPI:IPI00883216 Ensembl:ENSGALT00000013865
ArrayExpress:F1P0S5 Uniprot:F1P0S5
Length = 804
Score = 116 (45.9 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 92/473 (19%), Positives = 197/473 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 36 TPSFPTDADVQFVIQMRP---ALKGAILSLLTYYKWEKFVYLYDT--ERGFSILQAIMEA 90
Query: 101 LREAGAEII--HVLALPHFPS-SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMK 157
+ ++ V ++ R+ EE+++ Q + +++ ++ + E+ +
Sbjct: 91 AVQNNWQVTARSVGSIKDVQEFRRIIEEMDRR---QEKRYLIDCEVDRINTILEQVVILG 147
Query: 158 MMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGA 216
+ Y ++ + FT +V +++ G V + + P Q F +R+ +
Sbjct: 148 KHSRGYHYMLANLGFTDIVLERVMHGGANVTGFQIVNN----ENPMVQQFLQRWVRLDER 203
Query: 217 EYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFM 275
E+PE N+ A+ T+DAV +A A + ++++ + RR S D L
Sbjct: 204 EFPEAKNSPLKYTSAL-THDAVLVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAVPW 258
Query: 276 NQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWY 335
+Q + +++ + G + + F TYG + TI + S + G +W +
Sbjct: 259 SQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKASGSRKAG--YWNEYERF 315
Query: 336 TPKGWTLPAKD------QPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVE 389
P LP+ D + + + + S + Y +++L + G+ ++L + +
Sbjct: 316 VPTLDQLPSNDTSSVENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLASEIAK 374
Query: 390 KLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYADFT 438
+ + + +G Y D +++ N G V G D+A+ R + DF+
Sbjct: 375 HVGIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVIDFS 432
Query: 439 HPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 433 KPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 485
Score = 95 (38.5 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 637 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRTPVNLAVLKL 695
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L+ + +C + D S+LS S V ++L GG+ +V +
Sbjct: 696 SEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 755
Query: 703 RC 704
C
Sbjct: 756 FC 757
Score = 73 (30.8 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 546 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 587
>UNIPROTKB|F1M4T4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00947926
ProteinModelPortal:F1M4T4 Ensembl:ENSRNOT00000065613
ArrayExpress:F1M4T4 Uniprot:F1M4T4
Length = 883
Score = 122 (48.0 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDSRDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGA-EI-IHVLALPHFPSSRLSEEL 126
+V + W VTV+YED +TG++ L + ++ I I + LP P+++ ++ L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKIKIRQLP--PANKDAKPL 176
Query: 127 EK-LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSI 183
K +K + + S E A + ++ M MM + Y + T D F + S +
Sbjct: 177 LKEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGV 236
Query: 184 SSMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDA 237
+ M G +L + D P +++ +R A P + G + + YDA
Sbjct: 237 N-MTGFRLLNI------DNPHVSSIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDA 288
Query: 238 VWSVALAMEQKSE 250
V+ VA+A + S+
Sbjct: 289 VYMVAIASHRASQ 301
Score = 84 (34.6 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 28/124 (22%), Positives = 54/124 (43%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F +P G ++ +VK+L + V + I
Sbjct: 438 FEGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTI 497
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 498 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 557
Query: 487 LIER 490
+I R
Sbjct: 558 VIAR 561
Score = 81 (33.6 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 533 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 592
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 593 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 652
Query: 566 QSSNAI 571
I
Sbjct: 653 AKQTKI 658
Score = 79 (32.9 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E GKL
Sbjct: 712 ALLMESTSIEYVTQRNCN-LTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLH 770
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALVIFLWRCNWKINE 710
++ C E D + S+L +F VL+ G+ +++ + + +K +
Sbjct: 771 MMKEKWWRGNGCPE---EDSKEASALGVENIGGIFIVLAAGL-VLSVFVAIGEFLYKSRK 826
Query: 711 N 711
N
Sbjct: 827 N 827
>UNIPROTKB|F1M3N1 [details] [associations]
symbol:Grin2a "Glutamate receptor ionotropic, NMDA 2A"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2737
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565 IPI:IPI00948725
ProteinModelPortal:F1M3N1 Ensembl:ENSRNOT00000067670
ArrayExpress:F1M3N1 Uniprot:F1M3N1
Length = 1327
Score = 127 (49.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 321 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 377
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 378 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 437
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 438 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 497
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 498 AFFAVIFLASYTANLAAFM 516
Score = 95 (38.5 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 580 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 639
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 640 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 694
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 695 LITFIWEHLFYWKL 708
Score = 67 (28.6 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 27/119 (22%), Positives = 54/119 (45%)
Query: 52 FLLQASQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEI 108
F AS Q Q + I+Q ++WH VT I+ + I + ++ G ++
Sbjct: 8 FQFGASIQQ--QATVMLKIMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSF--VGWDM 63
Query: 109 IHVLALP-HFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
+V+ L F ++ +L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 64 QNVITLDTSFEDAKTQVQLKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 119
>ZFIN|ZDB-GENE-020125-5 [details] [associations]
symbol:gria3a "glutamate receptor, ionotropic, AMPA
3a" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
HOVERGEN:HBG051839 KO:K05199 EMBL:AF525745 IPI:IPI00483360
RefSeq:NP_938153.1 UniGene:Dr.133590 ProteinModelPortal:Q71E61
SMR:Q71E61 GeneID:170452 KEGG:dre:170452 CTD:170452
InParanoid:Q71E61 NextBio:20797093 Uniprot:Q71E61
Length = 886
Score = 101 (40.6 bits), Expect = 1.3e-10, Sum P(5) = 1.3e-10
Identities = 42/124 (33%), Positives = 57/124 (45%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 719 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRTPVSLAVLKL 777
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGIS---TIALVI 699
SE G L +L+ + +C + D S+LS S V ++L GG+ T+ALV
Sbjct: 778 SEQGILDKLKNKWWYDKGECGTKDSVSKDKTSALSLSNVAGVFYILVGGLGLAMTVALVE 837
Query: 700 FLWR 703
F ++
Sbjct: 838 FCYK 841
Score = 81 (33.6 bits), Expect = 1.3e-10, Sum P(5) = 1.3e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 478 PETKTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 537
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 538 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 568
Score = 73 (30.8 bits), Expect = 1.3e-10, Sum P(5) = 1.3e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 628 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 669
Score = 58 (25.5 bits), Expect = 1.3e-10, Sum P(5) = 1.3e-10
Identities = 43/208 (20%), Positives = 90/208 (43%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F+LQ + A+ +++ ++W + +Y D D + + + A
Sbjct: 119 TPSFPTDTDVQFVLQMRPSLRG---ALLSLLAHYKWEKFVYLY-DTDRGFSILQAIMESA 174
Query: 101 LR---EAGAEIIHVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMK 157
+ + A + + P R+ EE+++ Q + F++ +E + E+
Sbjct: 175 VMNNWQVTARSVGNIVDP-LEYRRIIEEMDRR---QEKRFLIDCEVERINSILEQVVIAG 230
Query: 158 MMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGA 216
+ Y +I + FT++ S++ I G + P D P Q F +R +
Sbjct: 231 KNSRGYHYILANLGFTNM--SLD-KVFPGGANITGFQIINP-DSPIVQQFLQRRERLDER 286
Query: 217 EYPEEDNNHEPGALAVQTYDAVWSVALA 244
E+PE ++ A+ T+DA+ +A A
Sbjct: 287 EFPESRSSPLKYTSAL-THDAILVIAEA 313
Score = 52 (23.4 bits), Expect = 1.3e-10, Sum P(5) = 1.3e-10
Identities = 24/115 (20%), Positives = 47/115 (40%)
Query: 258 RRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYN 317
R + + G+TG ++F + +T + + R++G+W F + N
Sbjct: 349 RALKMVQVQGMTGNIQFDSFGRRSNYTVDVYEMKPGGARKIGYWNEFEKFVYIVEQQVTN 408
Query: 318 -CSSMKDLGQVFWP--GAPW--YTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEY 367
SS+++ V AP+ Y L D+ V + SE ++V ++Y
Sbjct: 409 ESSSVENRTIVVTTIMEAPYVMYKRNYMQLEGNDRYEGYCVDLASEIAKHVGIKY 463
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 379 FSIELFKA---LVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFA-GVVGDVAIVARRCQ- 433
F+++L+ + EK PF+L YN S V + + F+ GV RR
Sbjct: 46 FAVQLYNTNQNITEK-PFHLNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDRRSMN 104
Query: 434 -YADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIY 480
F S + FP + + +L ++P R L+++++ Y
Sbjct: 105 TLTSFCGALHTSFITPSFPTD-TDVQFVLQMRPSLRGA--LLSLLAHY 149
>MGI|MGI:95808 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA1 (alpha 1)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0001965 "G-protein alpha-subunit
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IGI] [GO:0007616 "long-term memory" evidence=ISO;IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008179 "adenylate
cyclase binding" evidence=ISO] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IDA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0009986 "cell surface" evidence=IDA]
[GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0031267 "small GTPase binding" evidence=ISO]
[GO:0031489 "myosin V binding" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO;IMP] [GO:0031681 "G-protein
beta-subunit binding" evidence=ISO] [GO:0031698 "beta-2 adrenergic
receptor binding" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032590 "dendrite
membrane" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043197
"dendritic spine" evidence=ISO;IDA] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044309 "neuron spine" evidence=ISO;IDA] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045838 "positive regulation of membrane potential"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0060076 "excitatory synapse" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95808 GO:GO:0014069
GO:GO:0009986 GO:GO:0005789 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0008021 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 HOGENOM:HOG000234372 CTD:2890 HOVERGEN:HBG051839
KO:K05197 EMBL:X57497 IPI:IPI00136965 PIR:S12874
RefSeq:NP_001106796.1 UniGene:Mm.4920 ProteinModelPortal:P23818
SMR:P23818 DIP:DIP-31970N IntAct:P23818 MINT:MINT-1897734
STRING:P23818 PhosphoSite:P23818 PaxDb:P23818 PRIDE:P23818
Ensembl:ENSMUST00000036315 GeneID:14799 KEGG:mmu:14799
UCSC:uc007izs.2 InParanoid:P23818 OMA:ARIMQQW BindingDB:P23818
ChEMBL:CHEMBL3502 ChiTaRS:GRIA1 NextBio:286953 Bgee:P23818
CleanEx:MM_GRIA1 Genevestigator:P23818
GermOnline:ENSMUSG00000020524 Uniprot:P23818
Length = 907
Score = 100 (40.3 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRGPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L++ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 768 SEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 69 (29.3 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 39 (18.8 bits), Expect = 1.3e-07, Sum P(4) = 1.3e-07
Identities = 10/50 (20%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + +++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPARIMQQWRTSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>UNIPROTKB|B7Z9G9 [details] [associations]
symbol:GRIA1 "cDNA, FLJ78833, highly similar to Glutamate
receptor 1" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
HOVERGEN:HBG051839 KO:K05197 EMBL:AK315934 IPI:IPI00978580
RefSeq:NP_001244951.1 SMR:B7Z9G9 STRING:B7Z9G9
Ensembl:ENST00000448073 UCSC:uc011dcy.2 Uniprot:B7Z9G9
Length = 916
Score = 100 (40.3 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 719 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRGPVNLAVLKL 777
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L++ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 778 SEQGVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 837
Query: 703 RC 704
C
Sbjct: 838 FC 839
Score = 82 (33.9 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 479 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 538
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 75 (31.5 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 628 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 686
Query: 590 TGAVF 594
AVF
Sbjct: 687 KIAVF 691
Score = 69 (29.3 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 356 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 392
Score = 40 (19.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 269 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 317
>UNIPROTKB|F5GZ52 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC006531 EMBL:AC007218 EMBL:AC022168
EMBL:AC026423 EMBL:AC133565 HGNC:HGNC:4585 InterPro:IPR018884
Pfam:PF10565 IPI:IPI01012161 ProteinModelPortal:F5GZ52 SMR:F5GZ52
Ensembl:ENST00000535259 UCSC:uc010uyn.2 ArrayExpress:F5GZ52
Bgee:F5GZ52 Uniprot:F5GZ52
Length = 1124
Score = 127 (49.8 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 301 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 357
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 358 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 417
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 418 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 477
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 478 AFFAVIFLASYTANLAAFM 496
Score = 95 (38.5 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 560 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 619
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 620 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 674
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 675 LITFIWEHLFYWKL 688
Score = 63 (27.2 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 21/101 (20%), Positives = 48/101 (47%)
Query: 70 IVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP-HFPSSRLSEE 125
I+Q ++WH VT I+ + + + ++ G ++ +V+ L F ++ +
Sbjct: 4 IMQDYDWHVFSLVTTIFPGYREFISFVKTTVDNSF--VGWDMQNVITLDTSFEDAKTQVQ 61
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 62 LKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 99
>UNIPROTKB|F1PXS6 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051930
"regulation of sensory perception of pain" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0030431 "sleep" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828
GO:GO:0042428 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0004972 OMA:CRSCLSN GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03004548
Ensembl:ENSCAFT00000030136 Uniprot:F1PXS6
Length = 1307
Score = 127 (49.8 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + V ++ N G VG + I
Sbjct: 301 GFCIDILKKLSRTVKF--TYDLYLVTNGKHGKKVNNVW-NGMIGEVVYQRAVMAVGSLTI 357
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVW 486
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V+
Sbjct: 358 NEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVF 417
Query: 487 LIER----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVW 531
+ E + L G A H G WL FN + + S++ VW
Sbjct: 418 VFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVW 477
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 478 AFFAVIFLASYTANLAAFM 496
Score = 95 (38.5 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 560 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 619
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 620 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 674
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 675 LITFIWEHLFYWKL 688
Score = 64 (27.6 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 22/101 (21%), Positives = 48/101 (47%)
Query: 70 IVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP-HFPSSRLSEE 125
I+Q ++WH VT I+ + I + ++ G ++ +V+ L F ++ +
Sbjct: 4 IMQDYDWHVFSLVTTIFPGYRDFISFIKTTVDNSF--VGWDMQNVITLDTSFEDAKTQVQ 61
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L+K+ V +++ S + AV + +A + + D+ WI
Sbjct: 62 LKKIHSS---VILLYCSKDEAVLILSEARSLGLTGYDFFWI 99
>UNIPROTKB|G3V6W0 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
CTD:2893 KO:K05200 RefSeq:NP_058959.2 UniGene:Rn.10938 GeneID:29629
KEGG:rno:29629 NextBio:609852 ProteinModelPortal:G3V6W0
Ensembl:ENSRNOT00000009514 Uniprot:G3V6W0
Length = 902
Score = 109 (43.4 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 105/509 (20%), Positives = 200/509 (39%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 ALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGF 300
A + +K++ + RR D L Q + T + + + G + + F
Sbjct: 309 AETFRSLRRQKID--ISRRGNAGDC--LANPAAPWGQGIDMERTLKQVRIQGLT-GNVQF 363
Query: 301 WTYG--LGFSDTIIDPKYN----CSSMKDLGQ-VFWPGAPWYTPKGWTLPAKDQPLRIGV 353
YG + ++ + + K D+ + V P T T +++ + +
Sbjct: 364 DHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMP--TLGNDTAAIENRTVVVTT 421
Query: 354 PIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD--DLVK 411
+ S + Y ++ + G+ ++L + + + +P +G Y D
Sbjct: 422 IMESPYVMYKK-NHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP-DGKYGARDADT 479
Query: 412 QLYLNNFAG--VVG--DVAIVAR-----RCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+++ N G V G ++AI R + DF+ P+ G+ +MI QKS
Sbjct: 480 KIW-NGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS 538
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FLDPLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 99 (39.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 40/122 (32%), Positives = 54/122 (44%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRTPVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE+G L +L+ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 776 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 73 (30.8 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
>WB|WBGene00001613 [details] [associations]
symbol:glr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 EMBL:FO080148
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 KO:K05313
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 EMBL:AF318606
PIR:T15306 RefSeq:NP_001021113.1 RefSeq:NP_001021114.1
UniGene:Cel.19346 ProteinModelPortal:Q10914 SMR:Q10914
STRING:Q10914 PaxDb:Q10914 PRIDE:Q10914 EnsemblMetazoa:B0280.12b
GeneID:175999 KEGG:cel:CELE_B0280.12 UCSC:B0280.12b CTD:175999
WormBase:B0280.12a WormBase:B0280.12b InParanoid:Q10914 OMA:MTPPIES
NextBio:890672 Uniprot:Q10914
Length = 977
Score = 150 (57.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 52/188 (27%), Positives = 86/188 (45%)
Query: 403 NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTL 460
+GS+D ++ L LN A V V + I R + DF+ P+ +G+ +MI +K
Sbjct: 554 DGSWDGMIGYL-LNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIF 612
Query: 461 LFLKPFTRAVWILVAVISIYNG-----FVV-WL------IE--RNHWPELTGSALHQTGT 506
F++P +WI +S Y G F+V W IE R + L+ +
Sbjct: 613 SFMEPLGMTIWIFT--LSSYFGVSLTIFLVSWFSPYEKRIEFKRGEFTVTNEFTLYNSLW 670
Query: 507 FFWLSFNLHGEKL--HSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIET 564
F +F G + + R+ + W F L+I +YTANL + LT + P + ++E
Sbjct: 671 FTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANLAAFLTLERMTPPIESVED 730
Query: 565 LQSSNAII 572
L + N I+
Sbjct: 731 LANQNKIL 738
Score = 117 (46.2 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 69/252 (27%), Positives = 110/252 (43%)
Query: 257 LRRILLSDFDG-LTGKVEFMNQKVAPAHTY---QIINLM-G----KSYRELGFWTYGLGF 307
+++++L+D DG LTG+++F KV T +I+ + G S E W G GF
Sbjct: 400 IKKVVLTDKDGTLTGRIQF--DKVTGKRTNFSAEIVEIKPGVNSLNSIWERFQWAEGEGF 457
Query: 308 SDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRIGVPIGSEFQQYV---- 363
+ +Y KD Q T KG LP+K LR V + + +V
Sbjct: 458 --LLGGERYVQEKKKDSSQ---------TRKG-ILPSKPWQLRFNV-VTVLVKPFVMLKR 504
Query: 364 -NVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYN-FIP---------FNGSYDDLVKQ 412
N EL+ F G+ I+L L + + + Y+ FI +GS+D ++
Sbjct: 505 RNPGEPELKGNDRFEGYCIDLLNLLAKNITGF-EYDVFISDGNKYGSRQADGSWDGMIGY 563
Query: 413 LYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAV 470
L LN A V V + I R + DF+ P+ +G+ +MI +K F++P +
Sbjct: 564 L-LNETADVAVAPLTITQERERAVDFSKPFMTTGISIMIKKPEKQEFNIFSFMEPLGMTI 622
Query: 471 WILVAVISIYNG 482
WI +S Y G
Sbjct: 623 WIFT--LSSYFG 632
Score = 83 (34.3 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 622 GLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSG 681
G G A G+PL S+ A+L +SE G+L++LE + D SSL+ S
Sbjct: 839 GYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWWYDRGQCDTGTSDGGTSSSLNLSK 898
Query: 682 FWVLF--VLSGGISTI--ALVIFLWRCN 705
+F +L+G + ++ ALV FL+R N
Sbjct: 899 VAGIFYILLAGMVLSMCTALVEFLFRKN 926
Score = 47 (21.6 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 197 PEDKPKFQDFCKRFRKRFGAEYPEEDNN 224
P D+ F++F F +R ++ + N+
Sbjct: 201 PSDEEMFKEFLNEFHRRISTQHTLKSND 228
>ZFIN|ZDB-GENE-030131-8013 [details] [associations]
symbol:gria4b "glutamate receptor, ionotropic,
AMPA 4b" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
KO:K05200 EMBL:AF525748 IPI:IPI00509003 RefSeq:NP_997917.1
UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 GeneID:336069
KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163
Uniprot:Q71E58
Length = 904
Score = 147 (56.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 100/472 (21%), Positives = 188/472 (39%)
Query: 42 TPNWATE-RWPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ TE F+LQ + A+ +++ ++W++ +Y D D + IL + +
Sbjct: 119 TPSFPTEGESQFVLQLRPSIRG---ALLSLLDHYDWNRFVFLY-DTDRGYS-ILQAIMEK 173
Query: 101 LREAGAEIIHVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMME 160
+ G ++ + + +F + + LE L Q + FV+ L E ++ E+ +
Sbjct: 174 AGQNGWQV-SAICVENFNDASYRQLLEDLDRRQEKTFVIDLEAERLNNMLEQIVSVGKHV 232
Query: 161 KDYIWITTDAFTSLVHSINTSSISSMQGILGVRSHFPED--KPKFQDFCKRFRKRFGAEY 218
K Y +I + IN M G V D P +R+ K EY
Sbjct: 233 KGYHYIMANLGFK---DINLERF--MHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQREY 287
Query: 219 PEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQ 277
P D P + TYD V +A A + +K++ + RR + D L NQ
Sbjct: 288 PGSDA--PPKYTSALTYDGVMVMAEAFRNLRRQKVD--ISRRGIAGDC--LANPAAPWNQ 341
Query: 278 KVAPAHTYQIINLMGKSYRELGFWTYG--LGFSDTIIDPKYNCSSMKDLGQVFWPGAPWY 335
+ T + + L G + + F YG + ++ + + K N + +G +W A
Sbjct: 342 GIDMERTLKQVRLQGLT-GNVQFDHYGRRVNYTMDVFELKSN--GPRRIG--YWNDADKL 396
Query: 336 --TPKGWTLPAKDQPLRIGVPIGSEFQQ--YVNVE--YDELRNFTYFGGFSIELFKALVE 389
T LP + + I + + YV ++ ++ + G+ ++L + +
Sbjct: 397 VLTQDHALLPNETYGMENRTVIVTTIMEGPYVMLKKNWEMYEGNEQYEGYCVDLASEIAK 456
Query: 390 KLPFYLPYNFIPFNGSY----------DDLVKQLYLNNFAGVVGDVAIVARRCQYADFTH 439
+ F + +P +G Y + +V +L V + I R + DF+
Sbjct: 457 HIGFKYKISIVP-DGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSK 515
Query: 440 PYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 516 PFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 87 (35.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 47/161 (29%), Positives = 68/161 (42%)
Query: 553 RGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFT 612
+ EPTV T ++ + + G YA L+S E E + K C
Sbjct: 698 KSAEPTVF---TKTTAEGVARVRKSKGKYAFLLESTMN-----EYTEQR----KPCDTMK 745
Query: 613 VAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASE-KCMEVNLHDD 671
V G G G A PKGS L +V A+LK++E G L +L+ + +C +
Sbjct: 746 VGG-NLDSKGYGVATPKGSQLGSAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGGEK 804
Query: 672 DDIS-SLSPSGF-WVLFVLSGGISTIALVIFLWRCNWKINE 710
D S +LS S V ++L GG+ LV + C NE
Sbjct: 805 DKSSQALSLSNVAGVFYILVGGLGLAMLVALIEFCYKSRNE 845
Score = 72 (30.4 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 627 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTDI 668
>ZFIN|ZDB-GENE-070821-6 [details] [associations]
symbol:grik5 "glutamate receptor, ionotropic, kainate
5" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-6 GO:GO:0016021
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 EMBL:BX005242 EMBL:CR388405
IPI:IPI00884667 ProteinModelPortal:F1RCX4
Ensembl:ENSDART00000114766 Bgee:F1RCX4 Uniprot:F1RCX4
Length = 716
Score = 162 (62.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 111/517 (21%), Positives = 225/517 (43%)
Query: 9 VEAILGPQTSEETSS-VAEIASKKQIPVLSFA-DATPNWATERWPFLLQASQNQLAQMKA 66
V +++GP +S + S V+ I +K+IP + + TP R+ + N+ + A
Sbjct: 81 VVSVIGPASSPASGSIVSHICGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSL-A 139
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALP-HFPSSRLS 123
I +I++S+ + +++ + A +L L + +R E + + L + + L
Sbjct: 140 IGSILRSFSYPSASLVC----AKAECLL-RLEELIRRFLISRETLSIRMLDDNLDPTPL- 193
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSI 183
L++++ + ++ + ++ + +KA+++ M Y +I T L+ + +
Sbjct: 194 --LKEIRDDKIATIIIDANASISYLILKKASELGMTSAFYKYILTTMDFPLLWLDDI--V 249
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPG-ALA-VQTYDAVWSV 241
I+G S F P + +F + + D N PG AL+ +DAV V
Sbjct: 250 DEQSNIVGF-SMFNTTHPFYLEFIRSLNLSWREGC---DINPYPGPALSSALLFDAVHVV 305
Query: 242 ALAMEQ--KSEKLNQK---------------LLRRILLSDFDGLTGKVEFMNQKVAPAHT 284
A+++ +S+++ K L+ + + ++DGLTG+VEF ++ +T
Sbjct: 306 VSAVQELNRSQEIGVKPLSCTSPQIWQHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 365
Query: 285 YQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPA 344
I+ ++E+G W Y ++T++ N +S+ D+ TL
Sbjct: 366 LHILEKHRGGHKEIGIW-YS---NNTLL---MNSTSL-DINV------------SETLAN 405
Query: 345 KDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI---- 400
K L I + + + + Y E + GF +++ + L + L F +
Sbjct: 406 KS--LIITTILENPYVMR-KINYQEFEGNEQYEGFCVDMLRELSDILKFTYRIKLVDDGL 462
Query: 401 ---PF-NGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKS 455
P NGS+ +V +L +N A + V I + R + DF+ P+ G+ +++ V
Sbjct: 463 YGAPEPNGSWTGMVGEL-INRKADLAVAAFTITSEREKVIDFSKPFMTLGISILYRVH-I 520
Query: 456 GNKT--LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
G K FL PF+ AVW+ + + + V++L R
Sbjct: 521 GRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLSAR 557
Score = 68 (29.0 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E + + + L I
Sbjct: 608 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESPDDLADQTNI 655
>UNIPROTKB|F1PG03 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023554 Uniprot:F1PG03
Length = 740
Score = 94 (38.1 bits), Expect = 5.2e-10, Sum P(5) = 5.2e-10
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 555 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRNAVNLAVLKL 613
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 614 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 673
Query: 703 RC 704
C
Sbjct: 674 FC 675
Score = 78 (32.5 bits), Expect = 5.2e-10, Sum P(5) = 5.2e-10
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 320 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 379
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 380 PLAYEIWMCIVFAYIGVSVVLFLVSR 405
Score = 73 (30.8 bits), Expect = 5.2e-10, Sum P(5) = 5.2e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 464 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 505
Score = 55 (24.4 bits), Expect = 5.2e-10, Sum P(5) = 5.2e-10
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 194 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 228
Score = 55 (24.4 bits), Expect = 5.2e-10, Sum P(5) = 5.2e-10
Identities = 35/149 (23%), Positives = 60/149 (40%)
Query: 97 LSDALREAGAEIIHVLAL--PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKAN 154
L + +AG HV A+ +F + LE+L Q + FV+ +E ++ E+
Sbjct: 5 LQAIMEKAGQHGWHVSAICVENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIV 64
Query: 155 KMKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKR 213
+ K Y +I + F + +++ G V + P K D K+ +R
Sbjct: 65 SVGKHVKGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR 123
Query: 214 FGAEYPEEDNNHEPGALAVQTYDAVWSVA 242
EYP + P + TYD V +A
Sbjct: 124 ---EYPGSET--PPKYTSALTYDGVLVMA 147
>WB|WBGene00001617 [details] [associations]
symbol:glr-6 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009792 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080933 GeneID:180955 KEGG:cel:CELE_F41B4.4 UCSC:F41B4.4a
CTD:180955 NextBio:911722 RefSeq:NP_741822.2
ProteinModelPortal:Q8MXV8 SMR:Q8MXV8 DIP:DIP-24287N
EnsemblMetazoa:F41B4.4a WormBase:F41B4.4a HOGENOM:HOG000019343
InParanoid:Q8MXV8 OMA:IVPRINE ArrayExpress:Q8MXV8 Uniprot:Q8MXV8
Length = 844
Score = 153 (58.9 bits), Expect = 5.3e-10, Sum P(4) = 5.3e-10
Identities = 48/202 (23%), Positives = 84/202 (41%)
Query: 378 GFSIELFKALVEKLPFYLPYNFIPFN-------GS--YDDLVKQLYLNNFAGVVGDVAIV 428
GF ++L L E L F + N G+ +D ++ ++ + V + +
Sbjct: 436 GFCVDLLDKLAEMLHFNYTLKIVKDNKYGERKNGTDEWDGMIGEILRGDADMAVAPITVT 495
Query: 429 ARRCQYADFTHPYTESGLVMIF--PVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVW 486
A R + DFT P+ + G+ M+ P KS + FL P + +VW A+ ++ +V
Sbjct: 496 ATRLEVIDFTDPFLQLGISMLMRQPNPKSSSSLTRFLWPLSASVWTFSAIATVITALLVT 555
Query: 487 LIERNHWPELTGSALHQTGTFFWLSFNLH---GEKLHSNLSRMTTLVWLFVALVISQTYT 543
+ E T Q ++ + L G + +R+ + VW LV+ YT
Sbjct: 556 VAAVLSPKESTAEFKIQNSVWYLVCILLRAGSGYNCQAGATRLISAVWWSFTLVLIAQYT 615
Query: 544 ANLTSMLTARGLEPTVNNIETL 565
AN ++LT N+ E L
Sbjct: 616 ANFAALLTVDRKSMPFNSFEEL 637
Score = 64 (27.6 bits), Expect = 5.3e-10, Sum P(4) = 5.3e-10
Identities = 25/111 (22%), Positives = 44/111 (39%)
Query: 593 VFL-EVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
VFL E A + + C V G A PKGS + +L ++E G +
Sbjct: 697 VFLMESATLDYQVTQNCNLTRVGNVVLGSNGYSIALPKGSKWREKLTRQILDLNEKGIIL 756
Query: 652 ELETSMI--ASEKCMEVNLHD-DDDISSLSPSGFWVLFVLSGGISTIALVI 699
L+ + + ++C D + + + G ++L L GI + V+
Sbjct: 757 MLKNNWWKKSQQECQSSEPEDLQTALGAENVYGLFLLLALGSGIGVLCAVL 807
Score = 56 (24.8 bits), Expect = 5.3e-10, Sum P(4) = 5.3e-10
Identities = 19/87 (21%), Positives = 38/87 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQL 61
DL +S+ V I+G E S + E ++ I + + TP + ++ L +
Sbjct: 79 DLANSE-VSVIIGVVDRESGSIIEEQCAELNILFIHYY-WTPGYQKKQQTSLNLYPSMEY 136
Query: 62 AQMKAIAAIVQSWEWHQVTVIYEDIDS 88
+Q+ + ++ W W IY + D+
Sbjct: 137 SQL--MERLINLWRWDNFVYIYSNYDA 161
Score = 42 (19.8 bits), Expect = 5.3e-10, Sum P(4) = 5.3e-10
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 261 LLSDFDGLTGKVEF 274
++ F GLTGK+ F
Sbjct: 336 IVKPFKGLTGKISF 349
>UNIPROTKB|F1N3G8 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0009986
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 GO:GO:0030288 GO:GO:0032281
GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2890
KO:K05197 OMA:ARIMQQW EMBL:DAAA02020690 EMBL:DAAA02020691
EMBL:DAAA02020692 EMBL:DAAA02020693 EMBL:DAAA02020694
EMBL:DAAA02020695 EMBL:DAAA02020696 EMBL:DAAA02020697
EMBL:DAAA02020698 EMBL:DAAA02020699 EMBL:DAAA02020700
EMBL:DAAA02020701 EMBL:DAAA02020702 IPI:IPI01000809
RefSeq:XP_002704933.2 UniGene:Bt.110838 Ensembl:ENSBTAT00000007628
GeneID:529618 KEGG:bta:529618 Uniprot:F1N3G8
Length = 837
Score = 93 (37.8 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 640 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 698
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 699 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 758
Query: 703 RC 704
C
Sbjct: 759 FC 760
Score = 82 (33.9 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 400 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 459
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 460 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 490
Score = 75 (31.5 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 549 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 607
Query: 590 TGAVF 594
AVF
Sbjct: 608 KIAVF 612
Score = 69 (29.3 bits), Expect = 5.5e-10, Sum P(4) = 5.5e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 277 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 313
Score = 40 (19.1 bits), Expect = 3.8e-07, Sum P(4) = 3.8e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 190 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQNL 238
>UNIPROTKB|E7EMV5 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 HGNC:HGNC:4571 IPI:IPI00977433
ProteinModelPortal:E7EMV5 SMR:E7EMV5 Ensembl:ENST00000521843
ArrayExpress:E7EMV5 Bgee:E7EMV5 Uniprot:E7EMV5
Length = 839
Score = 93 (37.8 bits), Expect = 5.6e-10, Sum P(4) = 5.6e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 642 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 700
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 701 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 760
Query: 703 RC 704
C
Sbjct: 761 FC 762
Score = 82 (33.9 bits), Expect = 5.6e-10, Sum P(4) = 5.6e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 400 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 459
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 460 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 490
Score = 75 (31.5 bits), Expect = 5.6e-10, Sum P(4) = 5.6e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 551 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 609
Query: 590 TGAVF 594
AVF
Sbjct: 610 KIAVF 614
Score = 69 (29.3 bits), Expect = 5.6e-10, Sum P(4) = 5.6e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 277 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 313
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 190 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 238
>MGI|MGI:95813 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IDA] [GO:0010975 "regulation
of neuron projection development" evidence=IMP] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=ISO;IPI] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IMP] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043523 "regulation of neuron apoptotic
process" evidence=IGI;IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=ISO;IDA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0097110 "scaffold protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95813
GO:GO:0014069 GO:GO:0034613 GO:GO:0030054 GO:GO:0045211
GO:GO:0043197 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:D13266 EMBL:BC139823 IPI:IPI00123534 PIR:PN0156
RefSeq:NP_032193.1 UniGene:Mm.439651 UniGene:Mm.447390
ProteinModelPortal:Q61625 SMR:Q61625 IntAct:Q61625 MINT:MINT-126960
STRING:Q61625 TCDB:1.A.10.1.8 PhosphoSite:Q61625 PaxDb:Q61625
PRIDE:Q61625 Ensembl:ENSMUST00000095852 GeneID:14804 KEGG:mmu:14804
UCSC:uc009cdz.1 InParanoid:A4QPG1 BindingDB:Q61625 ChiTaRS:GRID2
NextBio:286973 Bgee:Q61625 CleanEx:MM_GRID2 Genevestigator:Q61625
GermOnline:ENSMUSG00000071424 Uniprot:Q61625
Length = 1007
Score = 177 (67.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 91/363 (25%), Positives = 162/363 (44%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L+ +K+ K Q +L I +GLTG +EF P ++I+
Sbjct: 344 DRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGT 403
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+G+ R+LG W G + ++ D K ++M+ G V P + + ++
Sbjct: 404 NYGEELGRGVRKLGCWNPVTGLNGSLTDKKLE-NNMR--GVVLRVVTVLEEP--FVMVSE 458
Query: 346 DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS 405
+ +G P ++Q + D L N+ GF+ E++ A K Y +G+
Sbjct: 459 NV---LGKP--KKYQGFSIDVLDALSNYL---GFNYEIYVAPDHK------YGSPQEDGT 504
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF-- 462
++ LV +L + + I R DFT Y + + ++ + KT+ +F
Sbjct: 505 WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFAC 561
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHG 516
L PF ++W +A + G +V+L+ + P L T + L+ + F + SF G
Sbjct: 562 LAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGG 621
Query: 517 EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYS 575
E ++ L+ RM W AL++ +YTANL + LT +E ++ +++ L S I Y
Sbjct: 622 EVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDL-SKQTDIPYG 680
Query: 576 RCL 578
L
Sbjct: 681 TVL 683
Score = 54 (24.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +TV G T G G A GSP + +L++ +SG +
Sbjct: 756 CSFYTV-GNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDM 797
>RGD|68368 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA;ISO] [GO:0010975 "regulation of neuron projection
development" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA;ISO;IPI]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO]
[GO:0043197 "dendritic spine" evidence=IEA;ISO] [GO:0043523
"regulation of neuron apoptotic process" evidence=IEA;ISO]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA;ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA;ISO]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0097110
"scaffold protein binding" evidence=IEA;ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68368 GO:GO:0014069 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895 KO:K05207
OrthoDB:EOG4SBDX4 OMA:CSFYTVG EMBL:Z17239 EMBL:U08256
IPI:IPI00206854 PIR:S28858 RefSeq:NP_077355.1 RefSeq:XP_003749821.1
UniGene:Rn.10046 PDB:2V3T PDB:2V3U PDBsum:2V3T PDBsum:2V3U
ProteinModelPortal:Q63226 SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054
STRING:Q63226 PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304
GeneID:79220 KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 177 (67.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 91/363 (25%), Positives = 162/363 (44%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L+ +K+ K Q +L I +GLTG +EF P ++I+
Sbjct: 344 DRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGT 403
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+G+ R+LG W G + ++ D K ++M+ G V P + + ++
Sbjct: 404 NYGEELGRGVRKLGCWNPVTGLNGSLTDKKLE-NNMR--GVVLRVVTVLEEP--FVMVSE 458
Query: 346 DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS 405
+ +G P ++Q + D L N+ GF+ E++ A K Y +G+
Sbjct: 459 NV---LGKP--KKYQGFSIDVLDALSNYL---GFNYEIYVAPDHK------YGSPQEDGT 504
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF-- 462
++ LV +L + + I R DFT Y + + ++ + KT+ +F
Sbjct: 505 WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFAC 561
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHG 516
L PF ++W +A + G +V+L+ + P L T + L+ + F + SF G
Sbjct: 562 LAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGG 621
Query: 517 EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYS 575
E ++ L+ RM W AL++ +YTANL + LT +E ++ +++ L S I Y
Sbjct: 622 EVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDL-SKQTDIPYG 680
Query: 576 RCL 578
L
Sbjct: 681 TVL 683
Score = 54 (24.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +TV G T G G A GSP + +L++ +SG +
Sbjct: 756 CSFYTV-GNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDM 797
>UNIPROTKB|Q63226 [details] [associations]
symbol:Grid2 "Glutamate receptor ionotropic, delta-2"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:68368 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0060079 GO:GO:0060134 GO:GO:0035249 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:Z17239 EMBL:U08256 IPI:IPI00206854 PIR:S28858
RefSeq:NP_077355.1 RefSeq:XP_003749821.1 UniGene:Rn.10046 PDB:2V3T
PDB:2V3U PDBsum:2V3T PDBsum:2V3U ProteinModelPortal:Q63226
SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054 STRING:Q63226
PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304 GeneID:79220
KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 177 (67.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 91/363 (25%), Positives = 162/363 (44%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L+ +K+ K Q +L I +GLTG +EF P ++I+
Sbjct: 344 DRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGT 403
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+G+ R+LG W G + ++ D K ++M+ G V P + + ++
Sbjct: 404 NYGEELGRGVRKLGCWNPVTGLNGSLTDKKLE-NNMR--GVVLRVVTVLEEP--FVMVSE 458
Query: 346 DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS 405
+ +G P ++Q + D L N+ GF+ E++ A K Y +G+
Sbjct: 459 NV---LGKP--KKYQGFSIDVLDALSNYL---GFNYEIYVAPDHK------YGSPQEDGT 504
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF-- 462
++ LV +L + + I R DFT Y + + ++ + KT+ +F
Sbjct: 505 WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFAC 561
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHG 516
L PF ++W +A + G +V+L+ + P L T + L+ + F + SF G
Sbjct: 562 LAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGG 621
Query: 517 EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYS 575
E ++ L+ RM W AL++ +YTANL + LT +E ++ +++ L S I Y
Sbjct: 622 EVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDL-SKQTDIPYG 680
Query: 576 RCL 578
L
Sbjct: 681 TVL 683
Score = 54 (24.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +TV G T G G A GSP + +L++ +SG +
Sbjct: 756 CSFYTV-GNTVADRGYGIALQHGSPYRDVFSQRILELQQSGDM 797
>UNIPROTKB|E2RIZ6 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:RIGYWND EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023560 Uniprot:E2RIZ6
Length = 854
Score = 81 (33.6 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 56/241 (23%), Positives = 99/241 (41%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQHGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 A 242
A
Sbjct: 309 A 309
Score = 78 (32.5 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 482 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 541
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 542 PLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 73 (30.8 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
Score = 72 (30.4 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 27/70 (38%), Positives = 33/70 (47%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRTPVNLAVLKL 775
Query: 645 SESGKLRELE 654
SE+G L +L+
Sbjct: 776 SEAGVLDKLK 785
Score = 55 (24.4 bits), Expect = 6.0e-10, Sum P(5) = 6.0e-10
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 356 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 390
>FB|FBgn0038840 [details] [associations]
symbol:CG5621 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0015277 RefSeq:NP_001036735.1 UniGene:Dm.31266
ProteinModelPortal:Q0KI38 SMR:Q0KI38 PRIDE:Q0KI38
EnsemblMetazoa:FBtr0110956 GeneID:42476 KEGG:dme:Dmel_CG5621
UCSC:CG5621-RB FlyBase:FBgn0038840 OMA:IEYITER OrthoDB:EOG4W6M9W
PhylomeDB:Q0KI38 GenomeRNAi:42476 NextBio:828990 Bgee:Q0KI38
Uniprot:Q0KI38
Length = 956
Score = 171 (65.3 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 143/695 (20%), Positives = 268/695 (38%)
Query: 7 QKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKA 66
Q + A+ GP ++ I K++P F D ++ + L L A
Sbjct: 92 QNLVAVFGPTSNLAARHAMSICDAKELP---FLDTRWDFGAQLPTINLHPHPATLGV--A 146
Query: 67 IAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAE--IIHVLALPHFPSSRLSE 124
+ +V + W T+IYE + LP + + L+ G + V +
Sbjct: 147 LRDMVVALGWESFTIIYESGE-----YLPTVRELLQMYGTAGPTVTVRRYELDLNGNYRN 201
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS 184
L +++ FVV S+ F++A ++ ++ DY +I + H+++
Sbjct: 202 VLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDW---HTMDLEPYQ 258
Query: 185 SM-QGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEED------NN----HEPGALAVQ 233
I G+R P D + Q+ K + +E P ++ N+ ++ L +
Sbjct: 259 HAGTNITGLRLVSP-DSEQVQEVAKAL---YESEEPFQNVSCPLTNSMALVYDGVQLLAE 314
Query: 234 TYDAV--WSVALAMEQKSE-KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
TY V VAL+ S L+ + +GLTG + F + + ++I L
Sbjct: 315 TYKHVNFRPVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKLEVIEL 374
Query: 291 MGKSYRELGFWTYGLGFSDTIIDPKYNCS-SMKDL-GQVFWPGAPWYTPKGWTLPAKDQP 348
+++G W+ GF + P ++ M+ L + F P G L +
Sbjct: 375 AVSGMQKIGQWSGEDGFQENRPAPAHSLEPDMRSLVNKSFVVITAISEPYGM-LKETSEK 433
Query: 349 LRIGVPIGSEFQQYVNVEY-DELRNFTYFGGFSIELFKALVEKLPFYLPYNFI-PFNGSY 406
L G +F+ + +E DEL GFS +L Y I P G +
Sbjct: 434 LE-G---NDQFEGF-GIELIDELSKKL---GFSYTW------RLQEDNKYGGIDPKTGEW 479
Query: 407 DDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIF-PVQKSGNKTLLFLK 464
+ +++++ +++ A + + D+ + + R DFT P+ G+ ++F K K F+
Sbjct: 480 NGMLREI-IDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMS 538
Query: 465 PFTRAVWILVAV----ISIYNGFVVWLIERNHW----PELTG-SALHQTGTF---FWLSF 512
PF+ VW+ + + +SI + FV+ + W P + + L +F W S
Sbjct: 539 PFSGEVWLWLGLAYMGVSI-SMFVLGRLSPAEWDNPYPCIEEPTELENQFSFANCLWFSI 597
Query: 513 NL---HGEKLHSNL--SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQS 567
G +L +R W F L++ +YTANL + LT L +N+ + L
Sbjct: 598 GALLQQGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSK 657
Query: 568 SNAIIGYSRCLGDYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAF 627
+ + Y +G + + + E +Y G +V +AF
Sbjct: 658 NKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVD-RVENSNYAF 716
Query: 628 PKGSPLLPSVIEALLKVSESGKLRELETSMIASEK 662
S + + E +++ G L + + IA K
Sbjct: 717 LMESTTIEYITERRCTLTQVGALLDEKGYGIAMRK 751
Score = 59 (25.8 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 24/114 (21%), Positives = 47/114 (41%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A +E + + C T G G G A K P ++ +A+L++ E G L
Sbjct: 715 AFLMESTTIEYITERRCT-LTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLT 773
Query: 652 ELETSMIASEK----CMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
+++T ++ C + + +D +L S +F++ G S + + L
Sbjct: 774 KMKTKWWQEKRGGGACSDAD--EDSGAVALEISNLGGVFLVMGVGSFFGIFVSL 825
>FB|FBgn0051201 [details] [associations]
symbol:GluRIIE "Glutamate receptor IIE" species:7227
"Drosophila melanogaster" [GO:0015277 "kainate selective glutamate
receptor activity" evidence=ISS] [GO:0016021 "integral to membrane"
evidence=ISS] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:1900073 "regulation of neuromuscular synaptic transmission"
evidence=IC] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IC]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IPI]
[GO:0060025 "regulation of synaptic activity" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 EMBL:AE014297
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 KO:K05313 GO:GO:0005234 GO:GO:0004970
EMBL:BT056325 RefSeq:NP_001036733.1 UniGene:Dm.18739 SMR:Q0KI42
EnsemblMetazoa:FBtr0110837 GeneID:318623 KEGG:dme:Dmel_CG31201
UCSC:CG31201-RB CTD:318623 FlyBase:FBgn0051201 eggNOG:NOG304745
InParanoid:Q0KI42 OMA:GICATKE OrthoDB:EOG44XGXQ GenomeRNAi:318623
NextBio:845667 Uniprot:Q0KI42
Length = 897
Score = 150 (57.9 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 106/497 (21%), Positives = 198/497 (39%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
+ + GP + + I IP + ++ + N E F L LA KA+
Sbjct: 98 IAGVFGPSSRHTAVHLMSICDAMDIPHI-YSYMSEN--AEG--FNLHPHPADLA--KALY 150
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEK 128
+++ + W + +YE + IL L+ L ++G +I VL + + L +
Sbjct: 151 SLITEFNWTRFIFLYESAEY--LNILNELTTMLGKSGT-VITVLRYDMQLNGNYKQVLRR 207
Query: 129 L-KGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SM 186
+ K R+ VV S E +A ++ ++ +DY +I + HS + S
Sbjct: 208 VRKSVDNRIVVVGSS-ETMPEFLNQAQQVGIINEDYKYIIGNLD---FHSFDLEEYKYSE 263
Query: 187 QGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGA--LAVQ---TYDAVWSV 241
I G+R PE K + G YP + + G+ + V+ TYDAV
Sbjct: 264 ANITGLRLFSPEKMA-----VKELLMKLG--YPTDQDEFRNGSCPITVEMALTYDAVQLF 316
Query: 242 ALAME------------QKSEKLN------QKLLRRILLSDFDGLTGKVEFMNQKVAPAH 283
A ++ Q++E + + +R + L+D LTG + F V +
Sbjct: 317 AQTLKNLPFKPMPQNCSQRTESVRDDGSSFKNYMRTLRLTD-RLLTGPIYFEGN-VRKGY 374
Query: 284 TYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP 343
+I L ++G W D D +Y + P + +L
Sbjct: 375 HLDVIELQPSGIVKVGTW-------DE--DRQYRPQRLA-------PTTAQFDSVDNSLA 418
Query: 344 AKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPY-----N 398
K + + VP + Q V Y +L + + G+ ++L K L +KL F + +
Sbjct: 419 NKTFIILLSVP-NKPYAQLVET-YKQLEGNSQYEGYGVDLIKELADKLGFNFTFVNGGND 476
Query: 399 FIPFNGSYDD---LVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIF-PVQK 454
+ +N S ++ +++++ + D+ I + R Q DFT P+ G+ +++ QK
Sbjct: 477 YGSYNKSTNESTGMLREIMTGRADLAITDLTITSEREQALDFTIPFMNLGIAILYLKPQK 536
Query: 455 SGNKTLLFLKPFTRAVW 471
+ + F+ PF+ VW
Sbjct: 537 ATPELFTFMDPFSEEVW 553
Score = 79 (32.9 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 32/145 (22%), Positives = 61/145 (42%)
Query: 447 VMIFPVQKSGNKTLLFLKPFTRAVWILVAV----ISIYNGFVVWLIERNHW--P----EL 496
++ QK+ + F+ PF+ VW + +S+ + F++ + + W P E
Sbjct: 529 ILYLKPQKATPELFTFMDPFSEEVWWFLGFSFLGVSL-SFFILGRLSPSEWDNPYPCIEE 587
Query: 497 TGSALHQ--TGTFFWLSFNL---HGEKLHSN-LSRMTTL-VWLFVALVISQTYTANLTSM 549
+Q G W + G ++ LS T W F L++ +YTANL +
Sbjct: 588 PEELENQFTLGNSIWFTTGALLQQGSEIGPKALSTRTVASFWWFFTLIVVSSYTANLAAF 647
Query: 550 LTARGLEPTVNNIETLQSSNAIIGY 574
LT + +N+++ L + + Y
Sbjct: 648 LTIEKPQSLINSVDDLADNKDGVVY 672
Score = 45 (20.9 bits), Expect = 7.8e-10, Sum P(3) = 7.8e-10
Identities = 25/87 (28%), Positives = 35/87 (40%)
Query: 622 GLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSM---IASEKCMEVNLHDDDDISSLS 678
G G A K P ALL++ E G L +++ + + C D D + L
Sbjct: 753 GYGIAMRKDWPHRGKFNNALLELQEQGVLEKMKNKWWNEVGTGIC--ATKEDAPDATPLD 810
Query: 679 PSGF-WVLFVLSGGISTIALV--IFLW 702
+ V FVL G S AL+ I W
Sbjct: 811 MNNLEGVFFVLLVG-SCCALLYGIISW 836
>UNIPROTKB|F1PDP9 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2890 KO:K05197 OMA:ARIMQQW EMBL:AAEX03003077
RefSeq:XP_853398.1 ProteinModelPortal:F1PDP9
Ensembl:ENSCAFT00000028256 GeneID:489168 KEGG:cfa:489168
Uniprot:F1PDP9
Length = 906
Score = 93 (37.8 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 69 (29.3 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>UNIPROTKB|P42261 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007616 "long-term memory" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030425 "dendrite"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0008066 "glutamate
receptor activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0009986 "cell
surface" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0044309 "neuron spine" evidence=ISS] [GO:0030165
"PDZ domain binding" evidence=ISS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 GO:GO:0009986 EMBL:CH471062 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 DrugBank:DB00142 GO:GO:0030288
GO:GO:0032281 GO:GO:0031623 GO:GO:0030165 GO:GO:0032590
DrugBank:DB01159 InterPro:IPR001828 DrugBank:DB01189
DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028 DrugBank:DB01236
GO:GO:0030666 Pathway_Interaction_DB:ephbfwdpathway
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 EMBL:M64752 EMBL:X58633 EMBL:M81886
EMBL:AK295039 EMBL:AK295827 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 EMBL:BC111734 IPI:IPI00030880
IPI:IPI00219124 PIR:A40222 PIR:A41273 PIR:S25852 PIR:S38723
RefSeq:NP_000818.2 RefSeq:NP_001107655.1 RefSeq:NP_001244948.1
RefSeq:NP_001244950.1 RefSeq:NP_001244952.1 UniGene:Hs.519693
UniGene:Hs.737709 ProteinModelPortal:P42261 SMR:P42261
DIP:DIP-41487N MINT:MINT-271172 STRING:P42261 PhosphoSite:P42261
DMDM:116242505 PaxDb:P42261 PRIDE:P42261 Ensembl:ENST00000285900
Ensembl:ENST00000340592 Ensembl:ENST00000518142
Ensembl:ENST00000544403 Ensembl:ENST00000544794 GeneID:2890
KEGG:hsa:2890 UCSC:uc003luy.4 UCSC:uc003lva.4 CTD:2890
GeneCards:GC05P152850 H-InvDB:HIX0032120 HGNC:HGNC:4571
HPA:CAB001965 MIM:138248 neXtProt:NX_P42261 PharmGKB:PA28966
HOVERGEN:HBG051839 KO:K05197 OrthoDB:EOG479F6B PhylomeDB:P42261
BindingDB:P42261 ChEMBL:CHEMBL2009 GenomeRNAi:2890 NextBio:11425
ArrayExpress:P42261 Bgee:P42261 CleanEx:HS_GRIA1
Genevestigator:P42261 GermOnline:ENSG00000155511 GO:GO:0015277
Uniprot:P42261
Length = 906
Score = 93 (37.8 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 69 (29.3 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>UNIPROTKB|Q38PU8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0014069
"postsynaptic density" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0043197 "dendritic
spine" evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0005789 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 EMBL:DQ159929 HSSP:P19491
ProteinModelPortal:Q38PU8 SMR:Q38PU8 Uniprot:Q38PU8
Length = 906
Score = 93 (37.8 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 69 (29.3 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(4) = 5.4e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>RGD|621531 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA 1"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0001965 "G-protein
alpha-subunit binding" evidence=IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007268
"synaptic transmission" evidence=ISO] [GO:0007616 "long-term
memory" evidence=ISO;IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008179 "adenylate cyclase binding" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISO;TAS] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010226
"response to lithium ion" evidence=IEP] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016020 "membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS]
[GO:0031267 "small GTPase binding" evidence=IPI] [GO:0031489
"myosin V binding" evidence=IPI] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031623 "receptor internalization"
evidence=ISO;IDA] [GO:0031681 "G-protein beta-subunit binding"
evidence=IDA] [GO:0031698 "beta-2 adrenergic receptor binding"
evidence=IPI] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISO;IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032590 "dendrite membrane" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=NAS]
[GO:0042220 "response to cocaine" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=TAS] [GO:0043005 "neuron
projection" evidence=ISO;IDA] [GO:0043025 "neuronal cell body"
evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0044309 "neuron spine"
evidence=ISO;IDA] [GO:0045202 "synapse" evidence=IDA;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045838
"positive regulation of membrane potential" evidence=IMP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0048167 "regulation of synaptic plasticity"
evidence=NAS;IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051018 "protein kinase A binding"
evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEP] [GO:0060076 "excitatory synapse" evidence=IDA]
[GO:0060992 "response to fungicide" evidence=IEP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEP]
[GO:0071359 "cellular response to dsRNA" evidence=IEP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IEP]
[GO:0071375 "cellular response to peptide hormone stimulus"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] [GO:0071418 "cellular response to amine
stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531
GO:GO:0005829 GO:GO:0048167 GO:GO:0042803 GO:GO:0014069
GO:GO:0071363 GO:GO:0005789 GO:GO:0046685 GO:GO:0042493
GO:GO:0032355 GO:GO:0060992 GO:GO:0010226 GO:GO:0042220
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0051602 GO:GO:0031594 GO:GO:0007616 GO:GO:0032279
GO:GO:0035249 GO:GO:0030288 GO:GO:0032281 GO:GO:0031623
GO:GO:0001919 GO:GO:0019228 GO:GO:0008179 GO:GO:0051018
GO:GO:0021510 GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828
GO:GO:0071375 GO:GO:0060076 GO:GO:0071418 GO:GO:0071230
GO:GO:0050806 PDB:2AWW PDBsum:2AWW GO:GO:0031681 GO:GO:0004971
GO:GO:0005234 CTD:2890 HOVERGEN:HBG051839 KO:K05197 EMBL:X17184
EMBL:M36418 EMBL:M38060 IPI:IPI00231012 IPI:IPI00324555 PIR:A40170
PIR:S07059 RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 93 (37.8 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 69 (29.3 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 39 (18.8 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
Identities = 10/50 (20%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + +++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPARIMQQWRTSDSRDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>UNIPROTKB|P19490 [details] [associations]
symbol:Gria1 "Glutamate receptor 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531 GO:GO:0005829
GO:GO:0048167 GO:GO:0042803 GO:GO:0014069 GO:GO:0071363
GO:GO:0005789 GO:GO:0046685 GO:GO:0042493 GO:GO:0032355
GO:GO:0060992 GO:GO:0010226 GO:GO:0042220 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051602
GO:GO:0031594 GO:GO:0007616 GO:GO:0032279 GO:GO:0035249
GO:GO:0030288 GO:GO:0032281 GO:GO:0031623 GO:GO:0001919
GO:GO:0019228 GO:GO:0008179 GO:GO:0051018 GO:GO:0021510
GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828 GO:GO:0071375
GO:GO:0060076 GO:GO:0071418 GO:GO:0071230 GO:GO:0050806 PDB:2AWW
PDBsum:2AWW GO:GO:0031681 GO:GO:0004971 GO:GO:0005234 CTD:2890
HOVERGEN:HBG051839 KO:K05197 EMBL:X17184 EMBL:M36418 EMBL:M38060
IPI:IPI00231012 IPI:IPI00324555 PIR:A40170 PIR:S07059
RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 93 (37.8 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 703 RC 704
C
Sbjct: 828 FC 829
Score = 82 (33.9 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 69 (29.3 bits), Expect = 7.8e-10, Sum P(4) = 7.8e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 39 (18.8 bits), Expect = 6.7e-07, Sum P(4) = 6.7e-07
Identities = 10/50 (20%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + +++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPARIMQQWRTSDSRDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>WB|WBGene00001612 [details] [associations]
symbol:glr-1 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009612
"response to mechanical stimulus" evidence=IMP] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
[GO:0007631 "feeding behavior" evidence=IMP] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISS;IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0016595 "glutamate
binding" evidence=ISS] [GO:0050913 "sensory perception of bitter
taste" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0014069 "postsynaptic density" evidence=IDA] [GO:0007614
"short-term memory" evidence=IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IDA] [GO:0006972
"hyperosmotic response" evidence=IMP] [GO:0001966 "thigmotaxis"
evidence=IMP] [GO:0032589 "neuron projection membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009612 GO:GO:0007631 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0035249 GO:GO:0006972 GO:GO:0007614
InterPro:IPR001828 GO:GO:0001966 GO:GO:0016595 EMBL:FO080280
GO:GO:0032589 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
KO:K05313 GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 EMBL:U34661
PIR:B88533 PIR:S60225 RefSeq:NP_498887.2 UniGene:Cel.6005
ProteinModelPortal:P34299 SMR:P34299 STRING:P34299 PaxDb:P34299
EnsemblMetazoa:C06E1.4 GeneID:176204 KEGG:cel:CELE_C06E1.4
UCSC:C06E1.4 CTD:176204 WormBase:C06E1.4 HOGENOM:HOG000234372
InParanoid:P34299 OMA:LINIRSA NextBio:891570 GO:GO:0050913
Uniprot:P34299
Length = 962
Score = 149 (57.5 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 53/229 (23%), Positives = 98/229 (42%)
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+GS+D ++ +L VV + I R + DF+ P+ +G+ +MI K
Sbjct: 526 DGSWDGMIGELLSGRAHAVVASLTINQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFS 585
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTGSALHQTGTF-----FWLS 511
F++P + +W+ + I V++L+ R W E + + F W +
Sbjct: 586 FMQPLSTEIWMYIIFAYIGVSVVIFLVSRFSPYEWRVEETSRGGFTISNDFSVYNCLWFT 645
Query: 512 ---FNLHG-EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQ 566
F G + L ++S R+ + W F ++I +YTANL + LT ++ + ++E L
Sbjct: 646 LAAFMQQGTDILPRSISGRIASSAWWFFTMIIVSSYTANLAAFLTLEKMQAPIESVEDLA 705
Query: 567 SSNAIIGYSRCLGDYASDLKSRKTGAV-----FLEVAEAKIFLAKYCKG 610
+ I + G AS K ++E +F+A Y +G
Sbjct: 706 KQSKIKYGIQGGGSTASFFKYSSVQIYQRMWRYMESQVPPVFVASYAEG 754
Score = 106 (42.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 31/124 (25%), Positives = 56/124 (45%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFI--------PFNGSYDDLVKQLYLNNFAGVVGDVAI 427
F GF I+L K L +K+ + Y +GS+D ++ +L VV + I
Sbjct: 492 FEGFCIDLLKLLADKIEEF-NYEIKLGTKAGSKQADGSWDGMIGELLSGRAHAVVASLTI 550
Query: 428 VARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ +G+ +MI K F++P + +W+ + I V++
Sbjct: 551 NQERERVVDFSKPFMTTGISIMIKKPDKQEFSVFSFMQPLSTEIWMYIIFAYIGVSVVIF 610
Query: 487 LIER 490
L+ R
Sbjct: 611 LVSR 614
Score = 80 (33.2 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 40/139 (28%), Positives = 60/139 (43%)
Query: 585 LKSRKTGAVFLEVAEAKIF--LAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALL 642
++S K FL A A + K C V +G G A P GS + A+L
Sbjct: 758 VRSHKGRYAFLLEATANEYENTRKPCDTMKVGANLNSIG-YGIATPFGSDWKDHINLAIL 816
Query: 643 KVSESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGF-WVLFVLSGG--ISTIA-LV 698
+ E G+L++LE + + D +SL+ S + ++L GG IS +A L
Sbjct: 817 ALQERGELKKLENKWWYDRGQCDAGITVDGSSASLNLSKVAGIFYILMGGMVISMLAALG 876
Query: 699 IFLWRCNW---KINENLLV 714
FL+R K N N +V
Sbjct: 877 EFLYRSRIEARKSNSNSMV 895
Score = 46 (21.3 bits), Expect = 8.1e-10, Sum P(3) = 8.1e-10
Identities = 44/227 (19%), Positives = 88/227 (38%)
Query: 76 WHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEKLK--GGQ 133
W+ V + +++ A +L + RE + L +P + LS + + + G
Sbjct: 81 WNMVNAVCDELKEGAMALLSSVDGKGREGIRGVSDALEMPLVSLTALSNDDHQQQQFGNL 140
Query: 134 CRVFV-VHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSISSMQGILGV 192
V V +S LA + K ++ D + + SL + T + +S++ +
Sbjct: 141 FEVSVRPPISELLADFIVHKGWGEVLVLIDPVHASLH-LPSLWRHLRTRTNTSVKASM-- 197
Query: 193 RSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSEKL 252
P D+ +F+ + +F N+E + + L + +S +
Sbjct: 198 -FDLPADEKQFEAYLMQFNMM---------RNNETNRILIDCASPKRLKKLLINIRSAQF 247
Query: 253 NQKLLRRILLSDFDGLTGKVE-FMNQKVAPAHTYQIINLMGKSYREL 298
NQ +L +++D L E F N + + + IIN G+ Y L
Sbjct: 248 NQANYHYVL-ANYDFLPYDQEMFQNGNINISG-FNIINKDGREYWSL 292
>UNIPROTKB|E7ESV8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
KO:K05197 OMA:ARIMQQW IPI:IPI00978580 ProteinModelPortal:E7ESV8
SMR:E7ESV8 Ensembl:ENST00000518783 UCSC:uc011dcz.2
ArrayExpress:E7ESV8 Bgee:E7ESV8 Uniprot:E7ESV8
Length = 916
Score = 93 (37.8 bits), Expect = 8.2e-10, Sum P(4) = 8.2e-10
Identities = 39/122 (31%), Positives = 52/122 (42%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 719 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 777
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 778 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 837
Query: 703 RC 704
C
Sbjct: 838 FC 839
Score = 82 (33.9 bits), Expect = 8.2e-10, Sum P(4) = 8.2e-10
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 479 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 538
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 75 (31.5 bits), Expect = 8.2e-10, Sum P(4) = 8.2e-10
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 628 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 686
Query: 590 TGAVF 594
AVF
Sbjct: 687 KIAVF 691
Score = 69 (29.3 bits), Expect = 8.2e-10, Sum P(4) = 8.2e-10
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 356 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 392
Score = 40 (19.1 bits), Expect = 5.6e-07, Sum P(4) = 5.6e-07
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 269 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 317
>UNIPROTKB|G3V6W1 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 CTD:2893 KO:K05200 OMA:RIGYWND
RefSeq:NP_001106655.1 UniGene:Rn.10938 GeneID:29629 KEGG:rno:29629
NextBio:609852 ProteinModelPortal:G3V6W1 Ensembl:ENSRNOT00000009542
Uniprot:G3V6W1
Length = 902
Score = 109 (43.4 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 105/509 (20%), Positives = 200/509 (39%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 ALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGF 300
A + +K++ + RR D L Q + T + + + G + + F
Sbjct: 309 AETFRSLRRQKID--ISRRGNAGDC--LANPAAPWGQGIDMERTLKQVRIQGLT-GNVQF 363
Query: 301 WTYG--LGFSDTIIDPKYN----CSSMKDLGQ-VFWPGAPWYTPKGWTLPAKDQPLRIGV 353
YG + ++ + + K D+ + V P T T +++ + +
Sbjct: 364 DHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMP--TLGNDTAAIENRTVVVTT 421
Query: 354 PIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD--DLVK 411
+ S + Y ++ + G+ ++L + + + +P +G Y D
Sbjct: 422 IMESPYVMYKK-NHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP-DGKYGARDADT 479
Query: 412 QLYLNNFAG--VVG--DVAIVAR-----RCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+++ N G V G ++AI R + DF+ P+ G+ +MI QKS
Sbjct: 480 KIW-NGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS 538
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FLDPLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 94 (38.1 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 717 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRNAVNLAVLKL 775
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 776 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 703 RC 704
C
Sbjct: 836 FC 837
Score = 73 (30.8 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
>UNIPROTKB|E9PH24 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC022317 EMBL:AC093596 EMBL:AC093733
EMBL:AC096769 EMBL:AC104077 EMBL:AC105315 EMBL:AC105452
EMBL:AC112695 EMBL:AC115111 HGNC:HGNC:4576 EMBL:AC020699
EMBL:AC095059 EMBL:AC108158 EMBL:AC110800 EMBL:AC115537
IPI:IPI00963845 ProteinModelPortal:E9PH24 SMR:E9PH24
Ensembl:ENST00000510992 UCSC:uc011cdu.2 ArrayExpress:E9PH24
Bgee:E9PH24 Uniprot:E9PH24
Length = 912
Score = 178 (67.7 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 88/356 (24%), Positives = 159/356 (44%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L+ +K+ K Q +L I GLTG++EF P ++I+
Sbjct: 249 DRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGT 308
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+G+ R+LG W G + ++ D K ++M+ G V P + + ++
Sbjct: 309 NYGEELGRGVRKLGCWNPVTGLNGSLTDKKLE-NNMR--GVVLRVVTVLEEP--FVMVSE 363
Query: 346 DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS 405
+ +G P ++Q + D L N+ GF+ E++ A K Y +G+
Sbjct: 364 NV---LGKP--KKYQGFSIDVLDALSNYL---GFNYEIYVAPDHK------YGSPQEDGT 409
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF-- 462
++ LV +L + + I R DFT Y + + ++ + KT+ +F
Sbjct: 410 WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFAC 466
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHG 516
L PF ++W +A + G +V+L+ + P L T + L+ + F + SF G
Sbjct: 467 LAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGG 526
Query: 517 EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
E ++ L+ RM W AL++ +YTANL + LT +E ++ +++ L I
Sbjct: 527 EVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEI 582
Score = 50 (22.7 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +T+ G T G G A GSP + +L++ ++G +
Sbjct: 661 CSFYTI-GNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDM 702
>UNIPROTKB|F1PEI5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 OMA:CSFYTVG
EMBL:AAEX03016767 EMBL:AAEX03016766 Ensembl:ENSCAFT00000015920
GeneTree:ENSGT00610000087353 Uniprot:F1PEI5
Length = 922
Score = 178 (67.7 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 91/363 (25%), Positives = 162/363 (44%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L+ +K+ K Q +L I GLTG++EF P ++I+
Sbjct: 259 DRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGT 318
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+G+ R+LG W G + ++ D K ++M+ G V P + + ++
Sbjct: 319 NYGEELGRGVRKLGCWNPVTGLNGSLTDKKLE-NNMR--GVVLRVVTVLEEP--FVMVSE 373
Query: 346 DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS 405
+ +G P ++Q + D L N+ GF+ E++ A K Y +G+
Sbjct: 374 NV---LGKP--KKYQGFSIDVLDALSNYL---GFNYEIYVAPDHK------YGSPQEDGT 419
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF-- 462
++ LV +L + + I R DFT Y + + ++ + KT+ +F
Sbjct: 420 WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFAC 476
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHG 516
L PF ++W +A + G +V+L+ + P L T + L+ + F + SF G
Sbjct: 477 LAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGG 536
Query: 517 EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYS 575
E ++ L+ RM W AL++ +YTANL + LT +E ++ +++ L S I Y
Sbjct: 537 EVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDL-SKQTDIPYG 595
Query: 576 RCL 578
L
Sbjct: 596 TVL 598
Score = 50 (22.7 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +T+ G T G G A GSP + +L++ ++G +
Sbjct: 671 CSFYTI-GNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDM 712
>UNIPROTKB|D4A2K9 [details] [associations]
symbol:Grin2c "Glutamate receptor ionotropic, NMDA 2C"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 IPI:IPI00201739 ProteinModelPortal:D4A2K9
Ensembl:ENSRNOT00000004502 ArrayExpress:D4A2K9 Uniprot:D4A2K9
Length = 1200
Score = 138 (53.6 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 50/208 (24%), Positives = 91/208 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFIP---FNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N G ++ ++ ++Y +G + I
Sbjct: 456 GFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEE 515
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAVISI-YNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+P++ AVW+++ V+ + V++ E
Sbjct: 516 RSEIIDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFE 575
Query: 490 R----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
++ LT G G WL FN + E S++ LVW F
Sbjct: 576 YFSPVSYNQNLTKGKKPGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFF 635
Query: 535 ALVISQTYTANLTSMLTARGLEPTVNNI 562
A++ +YTANL + + TV+ +
Sbjct: 636 AVIFLASYTANLAAFMIQEQYIDTVSGL 663
Score = 78 (32.5 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 35/172 (20%), Positives = 77/172 (44%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAE----IASKKQIPVLSFADATPNWATERWP--FLLQA 56
L+ + +V I+ + + +T +VA+ ++S+ +P+LS + + T + P LQ
Sbjct: 84 LLGAARVHGIVF-EDNVDTEAVAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQL 142
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEIIHVLAL 114
+ Q++ + +++ ++W VI A + + ++DA ++ VL L
Sbjct: 143 GVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAVADA-SYLSWRLLDVLTL 201
Query: 115 PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
P + L+ V V + S E A LF +A + ++ ++W+
Sbjct: 202 ELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 62 (26.9 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 25/89 (28%), Positives = 37/89 (41%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D + LK K A + A K CK T+ +G + G G A K S
Sbjct: 709 RSVEDALTSLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSH 768
Query: 633 LLPSVIEALLKVSESGKLRELETSMIASE 661
++ ALL++ G L+ L+ SE
Sbjct: 769 WKRAIDLALLQLLGDGHLQLLQRGTEPSE 797
Score = 38 (18.4 bits), Expect = 9.9e-06, Sum P(3) = 9.9e-06
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVH----LSLELAVHLFEKANKMKMMEKDYIWI 166
V L F SS+ + + GG V L+L V L ++ + + ++Y W
Sbjct: 104 VAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWS 163
Query: 167 TTDAFTSL 174
TSL
Sbjct: 164 AFAVITSL 171
>UNIPROTKB|O43424 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISS] [GO:0060134 "prepulse inhibition"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0006810
GO:GO:0043197 GO:GO:0035235 GO:GO:0045202 GO:GO:0060079
GO:GO:0060134 GO:GO:0035249 DrugBank:DB00142 GO:GO:0030288
GO:GO:0030165 GO:GO:0043523 InterPro:IPR001828 GO:GO:0097110
GO:GO:0008328 GO:GO:0005234 GO:GO:0008066 GO:GO:0004970
eggNOG:NOG276334 HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895
KO:K05207 OrthoDB:EOG4SBDX4 EMBL:AF009014 EMBL:AB209318
EMBL:AC022317 EMBL:AC093596 EMBL:AC093733 EMBL:AC096769
EMBL:AC104077 EMBL:AC105315 EMBL:AC105452 EMBL:AC112695
EMBL:AC115111 EMBL:BC099652 EMBL:BC099653 IPI:IPI00747494
RefSeq:NP_001501.2 UniGene:Hs.480281 ProteinModelPortal:O43424
SMR:O43424 MINT:MINT-257823 STRING:O43424 PhosphoSite:O43424
PaxDb:O43424 PRIDE:O43424 Ensembl:ENST00000282020 GeneID:2895
KEGG:hsa:2895 UCSC:uc011cdt.2 GeneCards:GC04P093225
H-InvDB:HIX0031353 HGNC:HGNC:4576 MIM:602368 neXtProt:NX_O43424
PharmGKB:PA28971 InParanoid:O43424 OMA:CSFYTVG PhylomeDB:O43424
GenomeRNAi:2895 NextBio:11455 ArrayExpress:O43424 Bgee:O43424
CleanEx:HS_GRID2 Genevestigator:O43424 Uniprot:O43424
Length = 1007
Score = 178 (67.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 88/356 (24%), Positives = 159/356 (44%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L+ +K+ K Q +L I GLTG++EF P ++I+
Sbjct: 344 DRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVSGLTGELEFGENGGNPNVHFEILGT 403
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+G+ R+LG W G + ++ D K ++M+ G V P + + ++
Sbjct: 404 NYGEELGRGVRKLGCWNPVTGLNGSLTDKKLE-NNMR--GVVLRVVTVLEEP--FVMVSE 458
Query: 346 DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGS 405
+ +G P ++Q + D L N+ GF+ E++ A K Y +G+
Sbjct: 459 NV---LGKP--KKYQGFSIDVLDALSNYL---GFNYEIYVAPDHK------YGSPQEDGT 504
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF-- 462
++ LV +L + + I R DFT Y + + ++ + KT+ +F
Sbjct: 505 WNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFAC 561
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHG 516
L PF ++W +A + G +V+L+ + P L T + L+ + F + SF G
Sbjct: 562 LAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGG 621
Query: 517 EKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
E ++ L+ RM W AL++ +YTANL + LT +E ++ +++ L I
Sbjct: 622 EVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEI 677
Score = 50 (22.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +T+ G T G G A GSP + +L++ ++G +
Sbjct: 756 CSFYTI-GNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDM 797
>UNIPROTKB|F1NAD5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0043523 "regulation
of neuron apoptotic process" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0043197 GO:GO:0035235 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:CSFYTVG
EMBL:AADN02016072 EMBL:AADN02016073 EMBL:AADN02016074
EMBL:AADN02016075 EMBL:AADN02016076 EMBL:AADN02016077
EMBL:AADN02016078 EMBL:AADN02016079 IPI:IPI00591618
Ensembl:ENSGALT00000016932 Uniprot:F1NAD5
Length = 908
Score = 153 (58.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 62/237 (26%), Positives = 110/237 (46%)
Query: 360 QQYVNVEYDELRNFTYFGGFSIELFKALVEKLPF----YL-P---YNFIPFNGSYDDLVK 411
+ +V V + L + GFSI++ +AL L F Y+ P Y +GS++ L+
Sbjct: 352 EPFVMVSENVLGKPKKYQGFSIDVLEALANYLGFKYEIYVAPDHKYGSPQDDGSWNGLIG 411
Query: 412 QLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF--LKPFTR 468
+L + + I R DFT Y + + ++ + KT+ +F L PF
Sbjct: 412 ELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RKAEKTVDMFACLAPFDL 468
Query: 469 AVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHGEKLHSN 522
++W +A + G +V+L+ + P L T + L+ + F + SF GE ++
Sbjct: 469 SLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTT 528
Query: 523 LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCL 578
L+ R+ W AL++ +YTANL + LT +E ++ +++ L S I Y L
Sbjct: 529 LATRLMMGAWWLFALIVISSYTANLAAFLTITRIENSIQSLQDL-SRQTDIPYGTVL 584
Score = 68 (29.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 26/90 (28%), Positives = 42/90 (46%)
Query: 236 DAVW-SVA-LAMEQKSEKLNQ---KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL 290
D W S+A L +K+ K Q +L I +GLTG++EF P ++I+
Sbjct: 245 DRKWHSMASLTCIRKNSKPWQGGRSMLETIKKGGVNGLTGELEFAENGGNPNVHFEILGT 304
Query: 291 -----MGKSYRELGFWTYGLGFSDTIIDPK 315
+G+ R+LG W G + ++ D K
Sbjct: 305 NYGEDLGRGIRKLGCWNPITGLNGSLTDRK 334
Score = 51 (23.0 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKL 650
C +TV G T G G A GSP + +L++ ++G +
Sbjct: 657 CSFYTV-GNTVADRGYGIALQHGSPYRDVFSQRILELQQNGDM 698
>RGD|61863 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IMP;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007268 "synaptic
transmission" evidence=IMP;TAS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA;IMP] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050803
"regulation of synapse structure and activity" evidence=TAS]
[GO:0050804 "regulation of synaptic transmission" evidence=IMP]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069
GO:GO:0060992 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0050803 GO:GO:0043195 GO:GO:0051968 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893
KO:K05200 OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037
EMBL:M38063 EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131
IPI:IPI00231132 PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1
RefSeq:NP_058959.2 UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS
PDB:3FAT PDB:3KEI PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE
PDBsum:3FAS PDBsum:3FAT PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA
ProteinModelPortal:P19493 SMR:P19493 DIP:DIP-41142N MINT:MINT-86166
STRING:P19493 TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493
GeneID:29629 KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493
BindingDB:P19493 ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493
NextBio:609852 ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 109 (43.4 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 105/509 (20%), Positives = 200/509 (39%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 ALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGF 300
A + +K++ + RR D L Q + T + + + G + + F
Sbjct: 309 AETFRSLRRQKID--ISRRGNAGDC--LANPAAPWGQGIDMERTLKQVRIQGLT-GNVQF 363
Query: 301 WTYG--LGFSDTIIDPKYN----CSSMKDLGQ-VFWPGAPWYTPKGWTLPAKDQPLRIGV 353
YG + ++ + + K D+ + V P T T +++ + +
Sbjct: 364 DHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMP--TLGNDTAAIENRTVVVTT 421
Query: 354 PIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD--DLVK 411
+ S + Y ++ + G+ ++L + + + +P +G Y D
Sbjct: 422 IMESPYVMYKK-NHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP-DGKYGARDADT 479
Query: 412 QLYLNNFAG--VVG--DVAIVAR-----RCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+++ N G V G ++AI R + DF+ P+ G+ +MI QKS
Sbjct: 480 KIW-NGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS 538
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FLDPLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 90 (36.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 606 KYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASE-KCM 664
K C V G G G A PKGS L +V A+LK++E G L +L+ + +C
Sbjct: 738 KPCDTMKVGG-NLDSKGYGVATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECG 796
Query: 665 EVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLWRC 704
D S+LS S V ++L GG+ LV + C
Sbjct: 797 SGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIEFC 837
Score = 73 (30.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
>UNIPROTKB|P19493 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069 GO:GO:0060992
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0050803
GO:GO:0043195 GO:GO:0051968 GO:GO:0032281 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893 KO:K05200
OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037 EMBL:M38063
EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131 IPI:IPI00231132
PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1 RefSeq:NP_058959.2
UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS PDB:3FAT PDB:3KEI
PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE PDBsum:3FAS PDBsum:3FAT
PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA ProteinModelPortal:P19493
SMR:P19493 DIP:DIP-41142N MINT:MINT-86166 STRING:P19493
TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493 GeneID:29629
KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493 BindingDB:P19493
ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493 NextBio:609852
ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 109 (43.4 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 105/509 (20%), Positives = 200/509 (39%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ TE F+LQ +
Sbjct: 88 SRGVFAIFGLYDKRSVHTLTSFCSALHISLI-----TPSFPTEGESQFVLQLRPSLRG-- 140
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLAL--PHFPSSRL 122
A+ +++ +EW+ +Y D D + IL + + +AG HV A+ +F
Sbjct: 141 -ALLSLLDHYEWNCFVFLY-DTDRGYS-ILQAI---MEKAGQNGWHVSAICVENFNDVSY 194
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTS 181
+ LE+L Q + FV+ +E ++ E+ + K Y +I + F +
Sbjct: 195 RQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIH 254
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSV 241
+++ G V + P K D K+ +R EYP + P + TYD V +
Sbjct: 255 GGANVTGFQLVDFNTPM-VTKLMDRWKKLDQR---EYPGSET--PPKYTSALTYDGVLVM 308
Query: 242 ALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGF 300
A + +K++ + RR D L Q + T + + + G + + F
Sbjct: 309 AETFRSLRRQKID--ISRRGNAGDC--LANPAAPWGQGIDMERTLKQVRIQGLT-GNVQF 363
Query: 301 WTYG--LGFSDTIIDPKYN----CSSMKDLGQ-VFWPGAPWYTPKGWTLPAKDQPLRIGV 353
YG + ++ + + K D+ + V P T T +++ + +
Sbjct: 364 DHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDMP--TLGNDTAAIENRTVVVTT 421
Query: 354 PIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD--DLVK 411
+ S + Y ++ + G+ ++L + + + +P +G Y D
Sbjct: 422 IMESPYVMYKK-NHEMFEGNDKYEGYCVDLASEIAKHIGIKYKIAIVP-DGKYGARDADT 479
Query: 412 QLYLNNFAG--VVG--DVAIVAR-----RCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+++ N G V G ++AI R + DF+ P+ G+ +MI QKS
Sbjct: 480 KIW-NGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFS 538
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 539 FLDPLAYEIWMCIVFAYIGVSVVLFLVSR 567
Score = 90 (36.7 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 606 KYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASE-KCM 664
K C V G G G A PKGS L +V A+LK++E G L +L+ + +C
Sbjct: 738 KPCDTMKVGG-NLDSKGYGVATPKGSSLGNAVNLAVLKLNEQGLLDKLKNKWWYDKGECG 796
Query: 665 EVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLWRC 704
D S+LS S V ++L GG+ LV + C
Sbjct: 797 SGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIEFC 837
Score = 73 (30.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 626 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 667
>UNIPROTKB|Q38PU6 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839 HSSP:P19491
EMBL:DQ159931 ProteinModelPortal:Q38PU6 SMR:Q38PU6 PRIDE:Q38PU6
Uniprot:Q38PU6
Length = 894
Score = 105 (42.0 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 89/475 (18%), Positives = 198/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 126 TPSFPTDADVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDT--ERGFSILQAIMEA 180
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 181 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 235
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 236 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 291
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 292 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 346
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 347 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 403
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 404 RFVPFSDQQISNDSASSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 462
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 463 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 520
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + SI V++L+ R
Sbjct: 521 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFASIGVSVVLFLVSR 575
Score = 91 (37.1 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 727 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALGNAVNLAVLKL 785
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 786 NEQGLLDKLKNKWWYDKGECGTGGCGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 845
Query: 703 RC 704
C
Sbjct: 846 FC 847
Score = 75 (31.5 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 566 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 624
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 625 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 677
>MGI|MGI:95810 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA3 (alpha 3)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043083
"synaptic cleft" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95810 GO:GO:0014069 GO:GO:0060992 GO:GO:0010226
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0043195 GO:GO:0032281 GO:GO:0043083
GO:GO:0001919 InterPro:IPR001828 EMBL:CH466570 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 CTD:2892 KO:K05199
OrthoDB:EOG4XKV68 EMBL:AB022342 EMBL:AB079072 EMBL:AF483494
EMBL:AF483495 EMBL:AK220530 EMBL:AL672290 EMBL:AL672232
EMBL:BC129855 IPI:IPI00131472 RefSeq:NP_058582.3 UniGene:Mm.327681
PDB:3LSW PDB:3LSX PDBsum:3LSW PDBsum:3LSX ProteinModelPortal:Q9Z2W9
SMR:Q9Z2W9 IntAct:Q9Z2W9 STRING:Q9Z2W9 PhosphoSite:Q9Z2W9
PaxDb:Q9Z2W9 PRIDE:Q9Z2W9 Ensembl:ENSMUST00000076349 GeneID:53623
KEGG:mmu:53623 UCSC:uc009tam.2 BindingDB:Q9Z2W9 ChEMBL:CHEMBL3624
EvolutionaryTrace:Q9Z2W9 NextBio:310361 Bgee:Q9Z2W9
CleanEx:MM_GRIA3 Genevestigator:Q9Z2W9
GermOnline:ENSMUSG00000001986 Uniprot:Q9Z2W9
Length = 888
Score = 101 (40.6 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 89/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 120 TPSFPTDADVQFVIQMRP---ALKGAILSLLGYYKWEKFVYLYDT--ERGFSILQAIMEA 174
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 175 AVQNNWQVTARSVGNIKDIQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 229
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT +V +++ G V + + P Q F +R+ +
Sbjct: 230 LGKHSRGYHYMLANLGFTDIVLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 285
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 286 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 340
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 341 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 397
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 398 RFVPFSDQQISNDSSSSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 456
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 457 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 514
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 515 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 95 (38.5 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 721 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRTPVNLAVLKL 779
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L+ + +C + D S+LS S V ++L GG+ +V +
Sbjct: 780 SEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 839
Query: 703 RC 704
C
Sbjct: 840 FC 841
Score = 75 (31.5 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 560 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 618
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 619 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 671
>UNIPROTKB|F1N246 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00707470 Ensembl:ENSBTAT00000026819
OMA:ICALICL Uniprot:F1N246
Length = 869
Score = 142 (55.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 74/328 (22%), Positives = 136/328 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNRDLFYINLYPDYAAISRAVL 123
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 124 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 177
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 178 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 237
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 238 -MTGFRLLNI------DNPHVSAIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 289
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDF-DGLTGKVEF-MNQKVAPA 282
+ VA+A + S+ +L + + I + + DGLTG++ F +
Sbjct: 290 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWWDGLTGRITFNKTDGLRKD 349
Query: 283 HTYQIINLMGKSYRELGFWTYGLGFSDT 310
II+L + ++G W G + T
Sbjct: 350 FDLDIISLKEEGTEKIGIWNSNSGLNMT 377
Score = 81 (33.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 517 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 576
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 577 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 636
Query: 566 QSSNAI 571
I
Sbjct: 637 AKQTKI 642
Score = 76 (31.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F + G ++ +VK+L + V + I
Sbjct: 422 FEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTI 481
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 482 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 541
Query: 487 LIER 490
+I R
Sbjct: 542 VIAR 545
>MGI|MGI:95821 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, NMDA2B (epsilon
2)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001964 "startle response" evidence=IGI;IMP]
[GO:0001967 "suckling behavior" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IGI;IMP] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005149 "interleukin-1
receptor binding" evidence=ISO] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity" evidence=IGI]
[GO:0005262 "calcium channel activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IGI] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IMP] [GO:0007611 "learning or
memory" evidence=TAS] [GO:0007612 "learning" evidence=IMP;IDA]
[GO:0007613 "memory" evidence=ISO;IMP;IDA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014049 "positive
regulation of glutamate secretion" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030018 "Z disc" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0031749 "D2 dopamine receptor
binding" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0042596 "fear
response" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043083 "synaptic cleft" evidence=ISO] [GO:0043113 "receptor
clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0045202
"synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045471 "response to ethanol" evidence=ISO;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048167 "regulation
of synaptic plasticity" evidence=IMP] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=TAS] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050806 "positive regulation
of synaptic transmission" evidence=ISO] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IGI;IMP] [GO:0070588
"calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95821
GO:GO:0014069 GO:GO:0009986 GO:GO:0007423 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0007612 GO:GO:0008021 GO:GO:0048266
GO:GO:0050966 GO:GO:0008270 GO:GO:0001701 GO:GO:0001967
GO:GO:0060079 GO:GO:0042734 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0048168 GO:GO:0001964 GO:GO:0017146
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 CTD:2904
KO:K05210 OrthoDB:EOG4Z8XVM EMBL:D10651 EMBL:AK002963
IPI:IPI00321320 PIR:I49704 RefSeq:NP_032197.3 UniGene:Mm.436649
ProteinModelPortal:Q01097 SMR:Q01097 DIP:DIP-31568N IntAct:Q01097
MINT:MINT-135847 STRING:Q01097 PhosphoSite:Q01097 PaxDb:Q01097
PRIDE:Q01097 GeneID:14812 KEGG:mmu:14812 UCSC:uc009elq.1
InParanoid:Q01097 BindingDB:Q01097 ChEMBL:CHEMBL3442 NextBio:287003
Genevestigator:Q01097 GermOnline:ENSMUSG00000030209 Uniprot:Q01097
Length = 1482
Score = 125 (49.1 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 519 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 578
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 579 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 638
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 639 AVIFLASYTANLAAFM 654
Score = 83 (34.3 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 36/176 (20%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAI-LGPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ + L T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVLADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 718 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 777
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 778 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 830
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 831 LSLITFI 837
>UNIPROTKB|F1S9S0 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AEMK01179282 EMBL:CU638667
EMBL:CU972359 EMBL:FP236137 Ensembl:ENSSSCT00000016497
Uniprot:F1S9S0
Length = 932
Score = 102 (41.0 bits), Expect = 3.8e-09, Sum P(4) = 3.8e-09
Identities = 31/133 (23%), Positives = 58/133 (43%)
Query: 367 YDELRNFTYFGGFSIELFKALVEKLPFYLPYNFI-------P-FNGSYDDLVKQLYLNNF 418
+ E+ + GF +++ K L E L F + P NG++ +V +L
Sbjct: 411 HQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKA 470
Query: 419 AGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVI 477
V + I A R + DF+ P+ G+ +++ V FL PF+ VW+ + +
Sbjct: 471 DLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLA 530
Query: 478 SIYNGFVVWLIER 490
+ V++L+ R
Sbjct: 531 YLAVSCVLFLVAR 543
Score = 77 (32.2 bits), Expect = 3.8e-09, Sum P(4) = 3.8e-09
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + ++ + +++ L AI
Sbjct: 594 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAI 641
Score = 71 (30.1 bits), Expect = 3.8e-09, Sum P(4) = 3.8e-09
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 695 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 753
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 754 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 805
Score = 62 (26.9 bits), Expect = 3.8e-09, Sum P(4) = 3.8e-09
Identities = 35/166 (21%), Positives = 76/166 (45%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 67 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFIKFQFQRFTTLNLHPSNTDISV-- 124
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A I+ + +I + A +L +L LR+ + + V L +
Sbjct: 125 AVAGILNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDTRDP--T 177
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD 169
L++++ + ++H + ++ + KA ++ M+ Y +I T+
Sbjct: 178 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTN 223
>ZFIN|ZDB-GENE-060809-5 [details] [associations]
symbol:si:ch211-251b21.1 "si:ch211-251b21.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 ZFIN:ZDB-GENE-060809-5 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG241927
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HOVERGEN:HBG104989 OrthoDB:EOG43FGX0 EMBL:CU499311 IPI:IPI00482094
RefSeq:NP_001138274.1 UniGene:Dr.3211 Ensembl:ENSDART00000008778
Ensembl:ENSDART00000139096 GeneID:571720 KEGG:dre:571720
OMA:QEGNFAF NextBio:20890667 Uniprot:B8JLR6
Length = 458
Score = 126 (49.4 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 41/180 (22%), Positives = 83/180 (46%)
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIF--PVQKSGNKTL 460
+G+++ ++ ++ V + + A+R D + P+ ++GL I + ++ L
Sbjct: 78 SGNWNGMIGEVVRGEADIAVAPLTLTAQREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFL 137
Query: 461 LFLKPFTRAVWILVAVISIYNGFVVWLIERN---HW--PELTGSALHQTGTFFWL--SFN 513
LK F+ +W+ V V + ++L+ R W PE ++ + +F++ +
Sbjct: 138 SLLKLFSTEMWMGVLVAYLLTSICIFLVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALT 197
Query: 514 LHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
L G H LS R+ T +W +LV+ Y ANL+ L + + ++ E L + N I
Sbjct: 198 LQGAGPHPKALSGRVITSIWWIFSLVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVI 257
Score = 90 (36.7 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 30/104 (28%), Positives = 51/104 (49%)
Query: 586 KSRKTGAVFL-EVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
+++K F+ E + +A+YC T A + G A P GSPL+ ++ A+L++
Sbjct: 302 RAQKGNYAFIGESVSLDLAVARYCN-LTRAPEIIGMRGYSIAAPLGSPLIKNLSVAILRL 360
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVL 688
SESG+L + AS C+ D + L P+ +F+L
Sbjct: 361 SESGELDYFRSKWWASS-CVA----KDSKGAPLKPASLKGVFLL 399
Score = 82 (33.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 30/124 (24%), Positives = 53/124 (42%)
Query: 378 GFSIELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFAGVV----GDVAIV----- 428
GF I++ A+ KL F + + +G Y N G V D+A+
Sbjct: 45 GFCIDMLSAISNKLGFKYDVHLVK-DGRYGKTDDSGNWNGMIGEVVRGEADIAVAPLTLT 103
Query: 429 ARRCQYADFTHPYTESGLVMIF--PVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVW 486
A+R D + P+ ++GL I + ++ L LK F+ +W+ V V + ++
Sbjct: 104 AQREAVVDMSKPFMQTGLSFIMRKDLGSDDSQFLSLLKLFSTEMWMGVLVAYLLTSICIF 163
Query: 487 LIER 490
L+ R
Sbjct: 164 LVSR 167
>UNIPROTKB|F1RU73 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
OMA:MVQQFLQ EMBL:CU210872 EMBL:CU469331 EMBL:CU856192
Ensembl:ENSSSCT00000013819 Uniprot:F1RU73
Length = 854
Score = 99 (39.9 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 88/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 86 TPSFPTDADVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDT--ERGFSILQAIMEA 140
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 141 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 195
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 196 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 251
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 252 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 306
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + + + G +W
Sbjct: 307 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVTGSRKAG--YWNEYE 363
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + A+++ + + + S + Y +++L + G+ ++L +
Sbjct: 364 RFVPFSDQQISNDSASAENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 422
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 423 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 480
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 481 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 535
Score = 95 (38.5 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 687 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRTPVNLAVLKL 745
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L+ + +C + D S+LS S V ++L GG+ +V +
Sbjct: 746 SEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 805
Query: 703 RC 704
C
Sbjct: 806 FC 807
Score = 75 (31.5 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 526 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 584
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 585 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 637
>UNIPROTKB|E1BXA6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:LLPWICQ
EMBL:AADN02043560 EMBL:AADN02043561 EMBL:AADN02043562
EMBL:AADN02043563 IPI:IPI00574242 ProteinModelPortal:E1BXA6
Ensembl:ENSGALT00000002914 Uniprot:E1BXA6
Length = 800
Score = 145 (56.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 115/492 (23%), Positives = 196/492 (39%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW------ITTDAFTSLVH 176
+EEL + + R ++ LS A +A + + KD W IT + LVH
Sbjct: 3 TEELNRYRDTLRRAILL-LSPRGAQTFINEAVETNLASKDSHWVYVNEEITDNEILELVH 61
Query: 177 SINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEY--PEEDNNHEPGALAVQT 234
S ++ M I R FP K Q C R R + P+E +
Sbjct: 62 S----ALGRMTVI---RQIFPLSKDNNQR-CMRNNHRISSLLCDPQEGYLQMLQVSNLYL 113
Query: 235 YDAVWSVALAMEQKSE--KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMG 292
YD+V +A A +K E K + + G M + + H + +M
Sbjct: 114 YDSVLMLANAFHRKLEDRKWHSMASLNCMRKSTKPWNGG-RSMLETIKKGHITGLTGVM- 171
Query: 293 KSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRIG 352
+RE G Y + F I+ Y+ + KD+ ++ A W + KG L Q R+G
Sbjct: 172 -EFREDGANPY-VQFE--ILGTSYSETFGKDVRRL----ATWDSEKG--LNGSLQERRLG 221
Query: 353 VPI-GSEF-------QQYVNVEYDELRNFTYFGGFSIELFKALVEKLPF-Y----LP--- 396
+ G + +V V + L + GFSI++ AL + L F Y P
Sbjct: 222 SDLQGLTLKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLDALAKNLGFKYEIYQAPDGK 281
Query: 397 YNFIPFNGSYDDLVKQLYLNNFAGV-VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKS 455
Y NGS++ ++ +L +N A + + + I R DF+ Y + + ++ ++K
Sbjct: 282 YGHQLQNGSWNGMIGEL-INKRADLAISAITITPERESVVDFSKRYMDYSVGIL--IKKP 338
Query: 456 GNKTLLF--LKPFTRAVWILVAVISIYNGFVVWLIER------NHWPELTGSALHQTGTF 507
K +F PF AVW +A G +++++ R + + + SA +
Sbjct: 339 EEKINIFSLFAPFDFAVWACIAAAIPIVGVLIFVLNRIQAVRAQNASQPSPSASSTLHSA 398
Query: 508 FWLSFNLH----GEK-LHSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
W+ + GE ++S R+ W L++ +YTANL + LT ++ +
Sbjct: 399 IWVVYGAFVQQGGESTVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTF 458
Query: 563 ETLQSSNAIIGY 574
+ L S I Y
Sbjct: 459 QDL-SKQMDISY 469
Score = 76 (31.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 40/155 (25%), Positives = 62/155 (40%)
Query: 564 TLQSSNAIIGYSRCLGDYASDLKSRKTGA-VFL---EVAEAKIFLAKYCKGFTVAGPTYK 619
T+ +N G C+ + + ++ K G FL V E C TV G +
Sbjct: 501 TISKNN---GADNCVSNPSEGIRKAKKGNYAFLWDVTVVEYAALTDDECS-VTVIGNSIS 556
Query: 620 VGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD--DDISSL 677
G G A GSP + +L++ ESG L L+ ++N H + D +L
Sbjct: 557 SKGYGIALQHGSPYRDLFSQRILELQESGDLDVLKQKWWPRMGRCDLNSHTNAQTDGKAL 616
Query: 678 SPSGFWVLF-VLSGGISTIALV--IFLWRCNWKIN 709
F +F +L+ G+ LV + LW W N
Sbjct: 617 KLHSFAGVFCILAIGLLLACLVAALELW---WNSN 648
>UNIPROTKB|K7GSB6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000083056 EMBL:AEMK01188348 EMBL:CU062538
EMBL:CU407189 EMBL:CU457396 EMBL:CU928568
Ensembl:ENSSSCT00000032833 Uniprot:K7GSB6
Length = 573
Score = 169 (64.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 110/509 (21%), Positives = 213/509 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP S ++V I + +P + + + F + + + +AI
Sbjct: 54 VAAIFGPSHSSSANAVQSICNALGVPHIQ-TRWKHQVSDNKDSFYVSLYPDFSSLSRAIL 112
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+VQ ++W VTV+Y+D +TG++ L + ++ + L + P+ + L
Sbjct: 113 DLVQFFKWKTVTVVYDD----STGLI-RLQELIKAPSRYNLR-LKIRQLPADTKDAKPLL 166
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E+A + ++A M MM + YI+ T D F V S ++
Sbjct: 167 KEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALDVEPYRYSGVN 226
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ K +R A P+ D+ G + A YDAV V
Sbjct: 227 ----MTGFRILNTENTQVSSIIEKWSMERLQAP-PKPDSGLLDGFMTTDAALMYDAVHVV 281
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++ ++Q K + + + I + ++GLTG++ F +
Sbjct: 282 SVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSLIKEAHWEGLTGRITFNKTNGLRTDFDLD 341
Query: 287 IINLMGKSYRELGFW--TYGLGFSDTIIDPKYNCS-SMKDLGQVFWPGAPWYTPKGWTLP 343
+I+L + ++G W GL +++ N + S+ + + + + L
Sbjct: 342 VISLKEEGLEKIGTWDPASGLNMTESQKGKPANITDSLSNRSLI----VTTILEEPYVLF 397
Query: 344 AK-DQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPF 402
K D+PL G F+ Y D LR + GF+ E+ LVE + +
Sbjct: 398 KKSDKPL-YG---NDRFEGYC---IDLLRELSTILGFTYEI--RLVEDGKYGAQDDA--- 445
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL- 461
NG ++ +V++L + V +AI R + DF+ P+ G+ +++ N +
Sbjct: 446 NGQWNGMVRELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFS 505
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P + +W+ + + + V+++I R
Sbjct: 506 FLNPLSPDIWMYILLAYLGVSCVLFVIAR 534
>ZFIN|ZDB-GENE-070424-223 [details] [associations]
symbol:grin2ab "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-223
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:BX005261
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:CT573178 IPI:IPI00489045
Ensembl:ENSDART00000103652 Ensembl:ENSDART00000137900
Uniprot:F1QDE5
Length = 1445
Score = 129 (50.5 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 49/199 (24%), Positives = 84/199 (42%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + F YL N N ++ +V ++ VG + I
Sbjct: 446 GFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINEE 505
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I V+L E
Sbjct: 506 RSEAIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVTAIAVFLFE 565
Query: 490 --------RN-------HWPELTGSALHQTGTFFW-LSFN--LHGEKLHSNLSRMTTLVW 531
RN H P T + + W L FN + + S+ VW
Sbjct: 566 FISPLGFNRNLAQGKDPHGPSFT---IGKAVWLLWGLVFNNSVPVQNPRGTTSKFIVSVW 622
Query: 532 LFVALVISQTYTANLTSML 550
F A++ +YTANL + +
Sbjct: 623 AFFAVIFLASYTANLAAFM 641
Score = 75 (31.5 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 33/126 (26%), Positives = 61/126 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLAKY---CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A CK T+ +G + G G A KGS V
Sbjct: 705 LVSLKTGKLDAFIYDAAVLNYMAGRDDGCKLVTIGSGYIFATTGYGIAMQKGSYWKRLVD 764
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
A+L + G++ ELE + E N + D+ +++ G V ++L+ ++ ++
Sbjct: 765 LAILGIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDNMA--G--VFYMLAAAMA-LS 819
Query: 697 LVIFLW 702
L+ F+W
Sbjct: 820 LITFVW 825
Score = 69 (29.3 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 35/186 (18%), Positives = 80/186 (43%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAE-IASKKQIPVLSFADATPNWATERWP----FLL 54
+LM Q++ ++ G T +E + + + ++S+ +P+L + E+ F
Sbjct: 77 ELMSRQRLHGLVYGDGTDQEAVAQMLDFVSSQTSMPILGIHGGSAMTMAEKDSSSSFFQF 136
Query: 55 QASQNQLAQMKAIAAIVQSWEWHQVTVI---YEDIDSSATGILPHLSDALREAGAEIIHV 111
AS Q A + + AI++ ++WH +V+ + + + + + +
Sbjct: 137 GASLQQEALL--MLAIMEEYDWHVFSVVTTKFPGFQEFIATVRVTVDHSFVRWDLQSVVT 194
Query: 112 LALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAF 171
L P R +L+++ Q V +++ S + A + E+A + + ++WI
Sbjct: 195 LDGVGEPEDRAHVQLKRI---QSPVILLYCSKDEAALVMEEARSLGLTGAGFVWIVPSLT 251
Query: 172 T-SLVH 176
T +L H
Sbjct: 252 TGNLEH 257
>UNIPROTKB|F1MLZ9 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0051930 "regulation of sensory
perception of pain" evidence=IEA] [GO:0048167 "regulation of
synaptic plasticity" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042428 "serotonin metabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0030431 "sleep"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:DAAA02057431 IPI:IPI00715468
Ensembl:ENSBTAT00000010376 Uniprot:F1MLZ9
Length = 1091
Score = 128 (50.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 48/196 (24%), Positives = 86/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N N ++ ++ ++ + VG + I
Sbjct: 85 GFCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYHRAVMAVGSLTINEE 144
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ +VW+++ V + I + V++ E
Sbjct: 145 RSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAIAVFVFE 204
Query: 490 R----NHWPELT-GSALH----QTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
+ L G A H G WL FN + + S++ VW F
Sbjct: 205 YFSPVGYNRNLAKGKAPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 264
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 265 AVIFLASYTANLAAFM 280
Score = 95 (38.5 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKY-----CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + K CK T+ +G + G G A KGSP +
Sbjct: 344 LVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQID 403
Query: 639 EALLKVSESGKLRELETSMIASEKCMEVN--LHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ G++ ELET + E N + DI +++ G V ++L+ ++ ++
Sbjct: 404 LALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMA--G--VFYMLAAAMA-LS 458
Query: 697 LVIFLWR--CNWKI 708
L+ F+W WK+
Sbjct: 459 LITFIWEHLFYWKL 472
>RGD|2738 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, N-methyl D-aspartate
2B" species:10116 "Rattus norvegicus" [GO:0001101 "response to acid"
evidence=IEP] [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001662 "behavioral fear response"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0001975
"response to amphetamine" evidence=IEP] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO;IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0007423
"sensory organ development" evidence=IEA;ISO] [GO:0007611 "learning
or memory" evidence=TAS] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007613 "memory" evidence=IEA;ISO;IDA] [GO:0007616 "long-term
memory" evidence=IEP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008021 "synaptic vesicle" evidence=IEA;ISO]
[GO:0008144 "drug binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009790 "embryo development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010042 "response to
manganese ion" evidence=IEP] [GO:0010350 "cellular response to
magnesium starvation" evidence=IEP] [GO:0010942 "positive regulation
of cell death" evidence=IMP;IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016594
"glycine binding" evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=IEA;ISO;IDA]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021987
"cerebral cortex development" evidence=IEP] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA] [GO:0031749
"D2 dopamine receptor binding" evidence=IPI] [GO:0032026 "response to
magnesium ion" evidence=IEP] [GO:0033555 "multicellular organismal
response to stress" evidence=IEP] [GO:0034097 "response to cytokine
stimulus" evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035255 "ionotropic glutamate receptor
binding" evidence=IPI] [GO:0042165 "neurotransmitter binding"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042596 "fear response" evidence=ISO] [GO:0042734 "presynaptic
membrane" evidence=ISO;IDA] [GO:0043005 "neuron projection"
evidence=ISO;IDA] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043408 "regulation of MAPK cascade" evidence=IMP] [GO:0045202
"synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEA;IEP;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IEA;ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048266 "behavioral
response to pain" evidence=IEA;ISO] [GO:0048511 "rhythmic process"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051602 "response to electrical
stimulus" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060416
"response to growth hormone stimulus" evidence=IEP] [GO:0060992
"response to fungicide" evidence=IEP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEP] [GO:0071287 "cellular response
to manganese ion" evidence=IEP] [GO:0071359 "cellular response to
dsRNA" evidence=IEP] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071396 "cellular response to lipid"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738
GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966 GO:GO:0051602
GO:GO:0008270 GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975 GO:GO:0014049
GO:GO:0048511 GO:GO:0030288 GO:GO:0051707 GO:GO:0043083 GO:GO:0010942
GO:GO:0001508 GO:GO:0008306 GO:GO:0043113 GO:GO:0033555 GO:GO:0046982
GO:GO:0009743 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0051597 GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0043408 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0071359 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 TCDB:1.A.10.1.6
CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419
IPI:IPI00326061 PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711
PDB:3JPW PDB:3JPY PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY
PDBsum:3QEL PDBsum:3QEM ProteinModelPortal:Q00960 SMR:Q00960
DIP:DIP-33702N IntAct:Q00960 MINT:MINT-104014 STRING:Q00960
PhosphoSite:Q00960 PRIDE:Q00960 GeneID:24410 KEGG:rno:24410
UCSC:RGD:2738 InParanoid:Q00960 BindingDB:Q00960 ChEMBL:CHEMBL311
EvolutionaryTrace:Q00960 NextBio:603231 Genevestigator:Q00960
GermOnline:ENSRNOG00000008766 Uniprot:Q00960
Length = 1482
Score = 125 (49.1 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 519 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 578
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 579 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 638
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 639 AVIFLASYTANLAAFM 654
Score = 80 (33.2 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ ++ T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 718 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 777
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 778 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 830
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 831 LSLITFI 837
>UNIPROTKB|Q00960 [details] [associations]
symbol:Grin2b "Glutamate receptor ionotropic, NMDA 2B"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738 GO:GO:0021987
GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0008144 GO:GO:0042220
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975
GO:GO:0014049 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043083 GO:GO:0010942 GO:GO:0001508 GO:GO:0008306
GO:GO:0043113 GO:GO:0033555 GO:GO:0046982 GO:GO:0009743
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597
GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 TCDB:1.A.10.1.6 CTD:2904 KO:K05210
OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419 IPI:IPI00326061
PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711 PDB:3JPW PDB:3JPY
PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY PDBsum:3QEL PDBsum:3QEM
ProteinModelPortal:Q00960 SMR:Q00960 DIP:DIP-33702N IntAct:Q00960
MINT:MINT-104014 STRING:Q00960 PhosphoSite:Q00960 PRIDE:Q00960
GeneID:24410 KEGG:rno:24410 UCSC:RGD:2738 InParanoid:Q00960
BindingDB:Q00960 ChEMBL:CHEMBL311 EvolutionaryTrace:Q00960
NextBio:603231 Genevestigator:Q00960 GermOnline:ENSRNOG00000008766
Uniprot:Q00960
Length = 1482
Score = 125 (49.1 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 519 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 578
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 579 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 638
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 639 AVIFLASYTANLAAFM 654
Score = 80 (33.2 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ ++ T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 718 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 777
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 778 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 830
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 831 LSLITFI 837
>UNIPROTKB|Q13224 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016594 "glycine binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0007611
"learning or memory" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0043005 "neuron
projection" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0030018 GO:GO:0071363
GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0043005
GO:GO:0007616 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0001975 GO:GO:0014049 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043083
GO:GO:0010942 GO:GO:0001508 GO:GO:0008306 GO:GO:0043113
GO:GO:0009743 Pathway_Interaction_DB:reelinpathway GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597 GO:GO:0060416
GO:GO:0071230 GO:GO:0071396 DrugBank:DB00836 Orphanet:178469
GO:GO:0001964 GO:GO:0050806 GO:GO:0032026 DrugBank:DB00502
DrugBank:DB01043 DrugBank:DB00949 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM
EMBL:U90278 EMBL:U88963 EMBL:U11287 EMBL:BC113618 EMBL:BC113620
EMBL:U28758 EMBL:U28861 EMBL:U28862 IPI:IPI00297933 PIR:I39066
PIR:S52086 RefSeq:NP_000825.2 UniGene:Hs.654430 PDB:1S11 PDB:1S2S
PDB:2IPV PDBsum:1S11 PDBsum:1S2S PDBsum:2IPV
ProteinModelPortal:Q13224 SMR:Q13224 IntAct:Q13224 MINT:MINT-127466
STRING:Q13224 PhosphoSite:Q13224 DMDM:14548162 PaxDb:Q13224
PeptideAtlas:Q13224 PRIDE:Q13224 Ensembl:ENST00000279593
GeneID:2904 KEGG:hsa:2904 UCSC:uc001rbt.2 GeneCards:GC12M013614
H-InvDB:HIX0036873 HGNC:HGNC:4586 MIM:138252 MIM:613970
neXtProt:NX_Q13224 PharmGKB:PA28980 InParanoid:Q13224 OMA:CTNRSHL
PhylomeDB:Q13224 BindingDB:Q13224 ChEMBL:CHEMBL1904 GenomeRNAi:2904
NextBio:11499 ArrayExpress:Q13224 Bgee:Q13224 CleanEx:HS_GRIN2B
Genevestigator:Q13224 GermOnline:ENSG00000150086 Uniprot:Q13224
Length = 1484
Score = 125 (49.1 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 519 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 578
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 579 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 638
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 639 AVIFLASYTANLAAFM 654
Score = 80 (33.2 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ ++ T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 718 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 777
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 778 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 830
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 831 LSLITFI 837
>UNIPROTKB|Q5R1P3 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0007423 GO:GO:0045471 GO:GO:0046872
GO:GO:0007613 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966
GO:GO:0008270 GO:GO:0001701 GO:GO:0035235 GO:GO:0001967
GO:GO:0060079 GO:GO:0030288 GO:GO:0001662 InterPro:IPR001828
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0004972 HOVERGEN:HBG052635 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
EMBL:AB195992 RefSeq:NP_001008719.1 UniGene:Cfa.16222 HSSP:Q00959
ProteinModelPortal:Q5R1P3 SMR:Q5R1P3 STRING:Q5R1P3 PRIDE:Q5R1P3
Ensembl:ENSCAFT00000020886 GeneID:494009 KEGG:cfa:494009 CTD:2904
InParanoid:Q5R1P3 KO:K05210 OrthoDB:EOG4Z8XVM NextBio:20865538
Uniprot:Q5R1P3
Length = 1485
Score = 125 (49.1 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 519 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 578
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 579 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 638
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 639 AVIFLASYTANLAAFM 654
Score = 80 (33.2 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ ++ T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 718 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 777
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 778 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 830
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 831 LSLITFI 837
>UNIPROTKB|F1MCL3 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 CTD:2904 KO:K05210 OMA:CTNRSHL
EMBL:DAAA02014263 EMBL:DAAA02014253 EMBL:DAAA02014254
EMBL:DAAA02014255 EMBL:DAAA02014256 EMBL:DAAA02014257
EMBL:DAAA02014258 EMBL:DAAA02014259 EMBL:DAAA02014260
EMBL:DAAA02014261 EMBL:DAAA02014262 IPI:IPI00717585
RefSeq:NP_001179850.1 UniGene:Bt.61353 ProteinModelPortal:F1MCL3
Ensembl:ENSBTAT00000000263 GeneID:537804 KEGG:bta:537804
NextBio:20877218 Uniprot:F1MCL3
Length = 1497
Score = 125 (49.1 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 459 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 518
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 519 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 578
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 579 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 638
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 639 AVIFLASYTANLAAFM 654
Score = 80 (33.2 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ ++ T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 718 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 777
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 778 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 830
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 831 LSLITFI 837
>UNIPROTKB|J9P2L9 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
OMA:CTNRSHL EMBL:AAEX03015244 Ensembl:ENSCAFT00000044471
Uniprot:J9P2L9
Length = 1513
Score = 125 (49.1 bits), Expect = 7.7e-09, Sum P(3) = 7.7e-09
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 487 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 546
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 547 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 606
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 607 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 666
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 667 AVIFLASYTANLAAFM 682
Score = 80 (33.2 bits), Expect = 7.7e-09, Sum P(3) = 7.7e-09
Identities = 35/176 (19%), Positives = 75/176 (42%)
Query: 2 DLMDSQKVEAIL-GPQTSEET-SSVAEIASKKQI-PVLSFADATPNWATER--WPFLLQA 56
DLM +K++ ++ T +E + + + S + + P+L + ++ Q
Sbjct: 87 DLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGIHGGSSMIMADKDESSMFFQF 146
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLA 113
+ Q + I++ ++W+ VT + I + ++ G E+ VL
Sbjct: 147 GPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLL 204
Query: 114 LPHF---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
L S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 205 LDMSLDDGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 257
Score = 68 (29.0 bits), Expect = 7.7e-09, Sum P(3) = 7.7e-09
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 746 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 805
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 806 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 858
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 859 LSLITFI 865
>MGI|MGI:95816 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007196 "adenylate
cyclase-inhibiting G-protein coupled glutamate receptor signaling
pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling
pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate
receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate
receptor activity" evidence=ISO] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886
GO:GO:0005887 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203
OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004
EMBL:AF245444 IPI:IPI00120318 IPI:IPI00986627 RefSeq:NP_001074566.1
UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:B1AS29
PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676
GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29
ChiTaRS:GRIK3 NextBio:286987 Bgee:B1AS29 Genevestigator:B1AS29
Uniprot:B1AS29
Length = 919
Score = 109 (43.4 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 71/327 (21%), Positives = 134/327 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQS +W TV+Y+D +TG++ L + + I L + P S L
Sbjct: 165 DLVQSLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPIDSDDSRPLL 218
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + ++A M MM + Y I+ T D + + S ++
Sbjct: 219 KEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 278
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVWS 240
+ G R D P +++ +R A P ++ G + A YDAV
Sbjct: 279 ----LTGFRI-LNVDNPHVSAIVEKWAMERLQAA-PRAESGLLDGVMMTDAALLYDAVHI 332
Query: 241 VALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT-- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 333 VSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTDF 390
Query: 285 -YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 391 DLDIISLKEDGLEKVGVWSPADGLNIT 417
Score = 88 (36.0 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 82 (33.9 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD +VK+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 69 (29.3 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>UNIPROTKB|P42263 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
DrugBank:DB00142 GO:GO:0032281 GO:GO:0043083 GO:GO:0001919
Orphanet:777 EMBL:CH471107 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839
EMBL:U10302 EMBL:U10301 EMBL:X82068 EMBL:AF166365 EMBL:AF166362
EMBL:AF166363 EMBL:AF166364 EMBL:AF167332 EMBL:AF166366
EMBL:AF166367 EMBL:AF166368 EMBL:AF166369 EMBL:AF166370
EMBL:AF166371 EMBL:AF166372 EMBL:AF166373 EMBL:AF166375
EMBL:AF166374 EMBL:AL356213 EMBL:AL035426 EMBL:AL590139 EMBL:Z83848
EMBL:Z82899 IPI:IPI00219315 IPI:IPI00298700 PIR:S49460 PIR:S50128
PIR:S53696 RefSeq:NP_000819.3 RefSeq:NP_015564.4 UniGene:Hs.377070
ProteinModelPortal:P42263 SMR:P42263 DIP:DIP-46195N STRING:P42263
TCDB:1.A.10.1.4 PhosphoSite:P42263 DMDM:77416864 PaxDb:P42263
PRIDE:P42263 DNASU:2892 Ensembl:ENST00000264357
Ensembl:ENST00000371251 Ensembl:ENST00000371256 GeneID:2892
KEGG:hsa:2892 UCSC:uc004etq.4 UCSC:uc004etr.4 CTD:2892
GeneCards:GC0XP122318 HGNC:HGNC:4573 HPA:CAB007799 MIM:300699
MIM:305915 neXtProt:NX_P42263 PharmGKB:PA28968 InParanoid:P42263
KO:K05199 OMA:MVQQFLQ OrthoDB:EOG4XKV68 BindingDB:P42263
ChEMBL:CHEMBL3595 ChiTaRS:GRIA3 GenomeRNAi:2892 NextBio:11437
ArrayExpress:P42263 Bgee:P42263 CleanEx:HS_GRIA3
Genevestigator:P42263 GermOnline:ENSG00000125675 Uniprot:P42263
Length = 894
Score = 99 (39.9 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 88/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 126 TPSFPTDADVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDT--ERGFSILQAIMEA 180
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 181 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 235
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 236 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 291
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 292 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 346
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 347 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 403
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 404 RFVPFSDQQISNDSASSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 462
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 463 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 520
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 521 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 575
Score = 92 (37.4 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 727 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRNAVNLAVLKL 785
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 786 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 845
Query: 703 RC 704
C
Sbjct: 846 FC 847
Score = 75 (31.5 bits), Expect = 9.2e-09, Sum P(3) = 9.2e-09
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 566 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 624
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 625 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 677
>UNIPROTKB|G3V6Z5 [details] [associations]
symbol:Gria3 "Glutamate receptor, ionotropic, AMPA3 (Alpha
3), isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:MVQQFLQ UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V6Z5 Ensembl:ENSRNOT00000010367 Uniprot:G3V6Z5
Length = 888
Score = 96 (38.9 bits), Expect = 9.3e-09, Sum P(3) = 9.3e-09
Identities = 87/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ +L + +A
Sbjct: 120 TPSFPTDADVQFVIQMRP---ALKGAILSLLGYYKWEKFVYLYDT--ERGFSVLQAIMEA 174
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 175 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 229
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 230 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 285
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 286 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 340
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 341 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 397
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 398 RFVPFSDQQISNDSSSSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 456
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 457 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 514
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 515 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 95 (38.5 bits), Expect = 9.3e-09, Sum P(3) = 9.3e-09
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 721 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRTPVNLAVLKL 779
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L+ + +C + D S+LS S V ++L GG+ +V +
Sbjct: 780 SEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 839
Query: 703 RC 704
C
Sbjct: 840 FC 841
Score = 75 (31.5 bits), Expect = 9.3e-09, Sum P(3) = 9.3e-09
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 560 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 618
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 619 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 671
>UNIPROTKB|E2RHU1 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2892
KO:K05199 OMA:MVQQFLQ EMBL:AAEX03026851 EMBL:AAEX03026852
RefSeq:XP_852016.1 ProteinModelPortal:E2RHU1
Ensembl:ENSCAFT00000029477 GeneID:492110 KEGG:cfa:492110
NextBio:20864762 Uniprot:E2RHU1
Length = 894
Score = 96 (38.9 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 87/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 126 TPSFPTDADVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDT--ERGFSILQAIMEA 180
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 181 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 235
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 236 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 291
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 292 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 346
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + + + G +W
Sbjct: 347 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVTGSRKAG--YWNEYE 403
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 404 RFVPFSDQQISNDSASSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 462
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 463 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 520
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 521 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 575
Score = 95 (38.5 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 727 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRTPVNLAVLKL 785
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE G L +L+ + +C + D S+LS S V ++L GG+ +V +
Sbjct: 786 SEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 845
Query: 703 RC 704
C
Sbjct: 846 FC 847
Score = 75 (31.5 bits), Expect = 9.5e-09, Sum P(3) = 9.5e-09
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 566 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 624
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 625 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 677
>UNIPROTKB|F6QCU7 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00711099 Ensembl:ENSBTAT00000026817
Uniprot:F6QCU7
Length = 797
Score = 137 (53.3 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 67/290 (23%), Positives = 123/290 (42%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V A+ GP S S+V I + ++P + P+ R F + + A +A+
Sbjct: 33 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPS-VDNRDLFYINLYPDYAAISRAVL 91
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEE--L 126
+V + W VTV+YED +TG++ L + ++ I + + PS + L
Sbjct: 92 DLVLYYNWKTVTVVYED----STGLI-RLQELIKAPSRYNIKI-KIRQLPSGNKDAKPLL 145
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEK--DYIWITTDAFTSLVHSINTSSIS 184
+++K G+ + S E A + ++ M MM + Y + T D F + S ++
Sbjct: 146 KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSGVN 205
Query: 185 SMQG--ILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGALAVQT---YDAV 238
M G +L + D P +++ +R A P + G + + YDAV
Sbjct: 206 -MTGFRLLNI------DNPHVSAIIEKWSMERLQAP-PRPETGLLDGMMTTEAALMYDAV 257
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEF 274
+ VA+A + S+ +L + + I + +DGLTG++ F
Sbjct: 258 YMVAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEAQWDGLTGRITF 307
Score = 81 (33.6 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 32/126 (25%), Positives = 52/126 (41%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW--PELTG---SALHQTGTF---FWL 510
FL P + +W+ V + + V+++I R W P + T FW
Sbjct: 446 FLNPLSPDIWMYVLLACLGVSCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWF 505
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 506 GVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 565
Query: 566 QSSNAI 571
I
Sbjct: 566 AKQTKI 571
Score = 76 (31.8 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--------GSYDDLVKQLYLNNFAGVVGDVAI 427
F G+ ++L K L L F + G ++ +VK+L + V + I
Sbjct: 351 FEGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTI 410
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N + FL P + +W+ V + + V++
Sbjct: 411 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 470
Query: 487 LIER 490
+I R
Sbjct: 471 VIAR 474
>UNIPROTKB|E1BGZ0 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:MVQQFLQ EMBL:DAAA02067291 EMBL:DAAA02067292
EMBL:DAAA02067293 EMBL:DAAA02067294 IPI:IPI00692662
Ensembl:ENSBTAT00000015717 BindingDB:E1BGZ0 Uniprot:E1BGZ0
Length = 754
Score = 96 (38.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 82/450 (18%), Positives = 186/450 (41%)
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEII-----HVLALPHFPSS 120
AI +++ ++W + +Y+ IL + +A + ++ ++ + F
Sbjct: 8 AILSLLGHYKWEKFVYLYDT--ERGFSILQAIMEAAVQNNWQVTARSVGNIKDVQEF--R 63
Query: 121 RLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSIN 179
R+ EE+++ Q + +++ +E + E+ + + Y ++ + FT ++
Sbjct: 64 RIIEEMDRR---QEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDILLERV 120
Query: 180 TSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
+++ G V + + P Q F +R+ + E+PE N A+ T+DA+
Sbjct: 121 MHGGANITGFQIVNN----ENPMVQQFIQRWVRLDEREFPEAKNAPLKYTSAL-THDAIL 175
Query: 240 SVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
+A A + ++++ + RR S D L +Q + +++ + G + +
Sbjct: 176 VIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAVPWSQGIDIERALKMVQVQGMT-GNI 230
Query: 299 GFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTP------KGWTLPAKDQPLRIG 352
F TYG + TI + + + G +W + P + A+++ + +
Sbjct: 231 QFDTYGRRTNYTIDVYEMKVTGSRKAG--YWNEYERFVPFSDQQISNDSASAENRTIVVT 288
Query: 353 VPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSYD--DLV 410
+ S + Y +++L + G+ ++L + + + + + +G Y D
Sbjct: 289 TILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEIAKHVRIKYKLSIVG-DGKYGARDPE 346
Query: 411 KQLYLNNFAG--VVG--DVAIVAR-----RCQYADFTHPYTESGL-VMIFPVQKSGNKTL 460
+++ N G V G D+A+ R + DF+ P+ G+ +MI QKS
Sbjct: 347 TKIW-NGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVF 405
Query: 461 LFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 406 SFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 435
Score = 92 (37.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 587 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRNAVNLAVLKL 645
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 646 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 705
Query: 703 RC 704
C
Sbjct: 706 FC 707
Score = 75 (31.5 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 426 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 484
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 485 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 537
>FB|FBgn0020429 [details] [associations]
symbol:GluRIIB "Glutamate receptor IIB" species:7227
"Drosophila melanogaster" [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0051968
"positive regulation of synaptic transmission, glutamatergic"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:1900075 "positive regulation of neuromuscular synaptic
transmission" evidence=IMP] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IPI] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IMP] [GO:0060025 "regulation of
synaptic activity" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0031594 GO:GO:0030288
InterPro:IPR001828 GO:GO:0004971 GO:GO:0005234 GO:GO:0015277
HSSP:P19491 EMBL:AF044202 ProteinModelPortal:O45028 SMR:O45028
STRING:O45028 PRIDE:O45028 FlyBase:FBgn0020429 eggNOG:NOG241128
InParanoid:O45028 OrthoDB:EOG4ZS7J3 ArrayExpress:O45028 Bgee:O45028
Uniprot:O45028
Length = 913
Score = 115 (45.5 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 350 RIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFN----GS 405
R+G P S ++ V Y+ F G++++L L ++ F +NF P GS
Sbjct: 429 RVGKPYFSWREEPEGVHYEGNERFE---GYAVDLIYMLAQECKF--DFNFEPVRDNKYGS 483
Query: 406 YD---D----LVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGN 457
YD D +++QL NN + D+ I R DFT P+ + G+ ++ +
Sbjct: 484 YDANTDEWDGIIRQLIDNNAQIGICDLTITQARRSVVDFTVPFMQLGISILSYKEPPPKA 543
Query: 458 KTLLFLKPFTRAVWILVAVISIYNGFVVWL---IERNHWPE 495
FL P+ VW+ V + + F + I++ W +
Sbjct: 544 DIYAFLNPYNAEVWLFVMIAMMITAFALIFTGRIDQYEWDQ 584
Score = 92 (37.4 bits), Expect = 3.4e-06, Sum P(3) = 3.4e-06
Identities = 31/126 (24%), Positives = 51/126 (40%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWL---IERNHW--P------ELTGSALHQTGTFFWL 510
FL P+ VW+ V + + F + I++ W P E+ + WL
Sbjct: 548 FLNPYNAEVWLFVMIAMMITAFALIFTGRIDQYEWDQPVENVNREMERQNIWHLSNALWL 607
Query: 511 ----SFNLHGEKLHSNLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
N + L L R+ T W AL+ISQTY A L + +T+ + + ++ L
Sbjct: 608 VLGSMLNQGCDLLPRGLPMRLLTAFWWIFALLISQTYIAKLAAFITSSKIAGDIGSLHDL 667
Query: 566 QSSNAI 571
N +
Sbjct: 668 VDQNKV 673
Score = 87 (35.7 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 32/135 (23%), Positives = 62/135 (45%)
Query: 587 SRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSE 646
S+ T A +E + ++ + C+ T G ++ G A P + ++ +L++SE
Sbjct: 724 SKGTYAFLMETTNLQYYVQRNCE-LTQIGESFGEKHYGIAVPLNADFRSNLSVGILRLSE 782
Query: 647 SGKLRELETSMIAS-EKCMEVNLH--DDDDISSLSPSGFWVLFVLSGGISTIALVIFLWR 703
G+L +L S E + N+ DD S G +V+ ++ G+ + LVI +
Sbjct: 783 RGELFKLRNKWFNSNESTCDSNVPTIDDGQFDMDSVGGLFVVLIV--GV-VVGLVIGVAE 839
Query: 704 CNWKINENLLVNKKI 718
W + + + V +KI
Sbjct: 840 FLWHV-QRISVKEKI 853
Score = 62 (26.9 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLL--QASQ 58
DL+ S V AI GP + + V + + IP L F D P + ER L +
Sbjct: 79 DLIGSG-VAAIFGPSSKTNSDIVEVLCNMTGIPHLQF-DWHPQQSNRERMNHQLTVNVAP 136
Query: 59 NQLAQMKAIAAIVQS--WEWHQVTVIYE 84
+L+ A + I+ S ++W T+ YE
Sbjct: 137 MELSLSAAFSDILASKTFDWKSFTIAYE 164
>ZFIN|ZDB-GENE-060503-5 [details] [associations]
symbol:gabbr1b "gamma-aminobutyric acid (GABA) B
receptor, 1b" species:7955 "Danio rerio" [GO:0004965 "G-protein
coupled GABA receptor activity" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0035095
"behavioral response to nicotine" evidence=IMP] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS50259 Pfam:PF01094 ZFIN:ZDB-GENE-060503-5 GO:GO:0016021
GO:GO:0035095 InterPro:IPR001828 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 GO:GO:0004965
GeneTree:ENSGT00530000063129 EMBL:BX537309 EMBL:BX539323
EMBL:FP102193 EMBL:FP102904 IPI:IPI00501866
ProteinModelPortal:F1QAJ3 Ensembl:ENSDART00000045616 Bgee:F1QAJ3
Uniprot:F1QAJ3
Length = 994
Score = 168 (64.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 92/374 (24%), Positives = 151/374 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
DL+ ++ ++ +L P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 227 DLLYTEPIKIVLMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 286
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ Q W+W ++ I + + T L L ++EAG EI + P+
Sbjct: 287 TLHNPTRVQLFQKWKWTKIATIQQTTEVF-TSTLDDLEQRVKEAGIEISVRQSFLTDPAV 345
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
+ + LK R+ +V L E A +F + K K+ K Y+W + I
Sbjct: 346 AV----KNLKRQDARI-IVGLFYETEARKVFCEVYKEKLYGKKYVWFLIGWYADNWFKIK 400
Query: 180 TSSISSM--QGILGVRSHFPED----KPKF---------QDFCKRFRKRFGAEYPEEDNN 224
SI+ Q V H + P+ Q+F + + G + PEE
Sbjct: 401 DPSINCTVEQMTEAVEGHVTTEIVMLNPETVRGASNLTSQEFLAQLMSKLGGKNPEETGG 460
Query: 225 HEPGALAVQTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT 284
+ LA YDAVW++ALA+ + L K R L DF+ N K A
Sbjct: 461 FQEAPLA---YDAVWALALALNKTVGPLKAKGRR---LEDFN--------YNNKDITAEI 506
Query: 285 YQIINLM---GKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQV-FWPG-APWYTPKG 339
Y+ +N G S + F G + T+I+ + S K +G G WY
Sbjct: 507 YRALNTSSFEGVSGHVV-FDAQGSRMAWTLIE-QLQGGSYKKIGYYDMTKGNLSWYGNDR 564
Query: 340 W--TLPAKDQPLRI 351
W + P DQ + I
Sbjct: 565 WIGSGPPADQTVVI 578
>UNIPROTKB|G3N1N5 [details] [associations]
symbol:100335496 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:DAAA02039769 EMBL:DAAA02039770
Ensembl:ENSBTAT00000063398 Uniprot:G3N1N5
Length = 660
Score = 94 (38.1 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 39/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 475 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSSLRNAVNLAVLKL 533
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 534 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 593
Query: 703 RC 704
C
Sbjct: 594 FC 595
Score = 78 (32.5 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 21/86 (24%), Positives = 38/86 (44%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L + + I R + DF+ P+ G+ +MI QKS FL
Sbjct: 240 WNGMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 299
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 300 PLAYEIWMCIVFAYIGVSVVLFLVSR 325
Score = 73 (30.8 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 384 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 425
Score = 55 (24.4 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 267 GLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
GLTG V+F + +T + L R++G+W
Sbjct: 114 GLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYW 148
>UNIPROTKB|B4JHV0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7222 "Drosophila grimshawi" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH916369 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_001989796.1 ProteinModelPortal:B4JHV0 STRING:B4JHV0
EnsemblMetazoa:FBtr0154407 GeneID:6563892 KEGG:dgr:Dgri_GH18993
FlyBase:FBgn0126460 InParanoid:B4JHV0 OMA:WLEMLSH Uniprot:B4JHV0
Length = 982
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 522 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 580
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 581 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 639
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 640 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 686
Score = 90 (36.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ +H+ NT
Sbjct: 219 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALHANNTPD 275
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 276 -----GVLGLQLEHAHSDKGHIRD 294
Score = 86 (35.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 40/167 (23%), Positives = 73/167 (43%)
Query: 541 TYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEVAEA 600
T + M R +E + N T++S+N + D+K K A + +
Sbjct: 693 TVKGSSVDMYFRRQVELS-NMYRTMESNNYVTAEQAI-----QDVKKGKLMAFIWDSSRL 746
Query: 601 KIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMI-- 658
+ +K C+ T AG + G G KGSP +V A+L+ ESG + +L+ I
Sbjct: 747 EYEASKDCELVT-AGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIFH 805
Query: 659 --ASEKCMEVNLHDDDDISSLSPSGFWVLFV--LSGGISTIAL-VIF 700
+ C E+ + + + +G ++L ++GG+ I + VI+
Sbjct: 806 GHVQQNC-ELFEKTPNTLGLKNMAGVFILVGVGIAGGVGLIIIEVIY 851
>UNIPROTKB|B4LZB5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7244 "Drosophila virilis" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH940650 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002054630.1 ProteinModelPortal:B4LZB5 STRING:B4LZB5
EnsemblMetazoa:FBtr0240485 GeneID:6630672 KEGG:dvi:Dvir_GJ24560
FlyBase:FBgn0211640 InParanoid:B4LZB5 OMA:HVANELH Uniprot:B4LZB5
Length = 984
Score = 129 (50.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 524 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 582
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 583 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLNSGI-GEGTPRSFSA 641
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 642 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 688
Score = 90 (36.7 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/84 (29%), Positives = 43/84 (51%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++++ S E A +F A + M + ++WI T+ +H+ NT
Sbjct: 221 TEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE---QALHANNTPD 277
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G+LG++ H DK +D
Sbjct: 278 -----GVLGLQLEHAHSDKGHIRD 296
>ZFIN|ZDB-GENE-070822-3 [details] [associations]
symbol:grin2ca "glutamate receptor, ionotropic,
N-methyl D-aspartate 2Ca" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-070822-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX546473 EMBL:CU464067
IPI:IPI00932733 RefSeq:XP_002661175.2 Ensembl:ENSDART00000110554
Ensembl:ENSDART00000145215 GeneID:100329743 KEGG:dre:100329743
Uniprot:E7FH62
Length = 1400
Score = 132 (51.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 378 GFSIELFKALVEKLPFYLPYN-FIPFNGSYDDLVKQLYLNNFAG---------VVGDVAI 427
GF I++ K L + F Y+ ++ NG + LV+ ++ N G +G + I
Sbjct: 466 GFCIDILKKLSRNIKF--SYDLYLVTNGKHGKLVRGIW-NGMIGEVFYKRADMAIGSLTI 522
Query: 428 VARRCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFV 484
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ +
Sbjct: 523 NEERSEIIDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT 580
Query: 485 VWLIER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTL 529
V++ E + L G G WL FN + E S++ L
Sbjct: 581 VFVFEYCSPVGYNRSLVSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVL 640
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
VW F A++ +YTANL + + TV+ +
Sbjct: 641 VWAFFAVIFLASYTANLAAFMIQEQYIDTVSGL 673
Score = 82 (33.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 37/148 (25%), Positives = 67/148 (45%)
Query: 580 DYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPS 636
D + LK+ K A + A K CK T+ +G + G G A K S
Sbjct: 723 DALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWKRP 782
Query: 637 VIEALLKVSESGKLRELETSMIA----SEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGI 692
+ ALL+ G ++L+T + +EK EV + DI +++ F++L V G
Sbjct: 783 IDLALLQFLADGDTQKLQTVWLTGICRNEK-KEV-MSSKLDIDNMA-GVFYMLLVAMG-- 837
Query: 693 STIALVIFLWR--CNWKINENLLVNKKI 718
++L++F W WK+ ++ ++++
Sbjct: 838 --LSLLVFAWEHLLYWKLRHSVRKSERL 863
Score = 55 (24.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 29/174 (16%), Positives = 72/174 (41%)
Query: 2 DLMDSQKVEAILGPQT--SEETSSVAE-IASKKQIPVLSFADATPNWATERWP--FLLQA 56
D + + +V ++ SE + + + I+++ +P++ + + + LQ
Sbjct: 92 DTLAANRVHGVVFEDNIGSEAVAQILDFISTQTAVPIVGISGGSAVVLPHKGDGSTFLQL 151
Query: 57 SQNQLAQMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDA--LREAGAEIIHV 111
+ Q+ + +++ + W VT +Y D+ I + + L E +
Sbjct: 152 GSSIEQQINGMFKVMEEYNWDSFVVVTSLYPGYDTYVDYIRSFIDTSYFLWELQDTLTFD 211
Query: 112 LALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW 165
++ R L+++ +V +V+ S + A +LF A ++ ++ YIW
Sbjct: 212 MSADGMNDLRARRLLQQI---DAQVLLVYCSHDEAQYLFSMAREVGLVGPGYIW 262
Score = 39 (18.8 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 143 LELAVHLFEKANKM-KMMEKDYIWITTDAFTSLVHSINT 180
L+L + ++ N M K+ME +Y W + TSL +T
Sbjct: 149 LQLGSSIEQQINGMFKVME-EYNWDSFVVVTSLYPGYDT 186
>UNIPROTKB|A2AVK2 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOVERGEN:HBG052638 UniGene:Hs.558334 HGNC:HGNC:4584 ChiTaRS:GRIN1
IPI:IPI00789973 SMR:A2AVK2 Ensembl:ENST00000350902 UCSC:uc004cli.1
Uniprot:A2AVK2
Length = 909
Score = 111 (44.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 513 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 570
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 571 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 667
Score = 83 (34.3 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 64/309 (20%), Positives = 125/309 (40%)
Query: 2 DLMDSQKVEAIL--GPQTSEE---TSSVAEIASKKQIPVLSFADATPNWATERWPF-LLQ 55
DL+ SQ V AIL P T + + V+ A +IPVL ++ + L+
Sbjct: 81 DLISSQ-VYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLR 139
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP 115
Q +++ + W+ + ++ D D L L E ++ VL
Sbjct: 140 TVPPYSHQSSVWFEMMRVYSWNHIILLVSD-DHEGRAAQKRLETLLEERESKAEKVLQFD 198
Query: 116 HFPSSR-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSL 174
P ++ ++ L + K + RV ++ S + A ++ A + M Y+W+ +
Sbjct: 199 --PGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE----- 251
Query: 175 VHSINTSSIS-SMQGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAV 232
I+ +++ + GILG++ + + D + E E++N +P V
Sbjct: 252 -REISGNALRYAPDGILGLQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCV 309
Query: 233 QTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMG 292
+ +W K+ L +++L +D G+TG+VEF Y I+NL
Sbjct: 310 GNTN-IW--------KTGPLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQN 358
Query: 293 KSYRELGFW 301
+ ++G +
Sbjct: 359 RKLVQVGIY 367
Score = 76 (31.8 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 320 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 373
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 374 PNDR--------KIIWPGGETEKPRGYQMSTR 397
Score = 69 (29.3 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 721 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 779
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 780 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 833
>ZFIN|ZDB-GENE-030616-53 [details] [associations]
symbol:gria3b "glutamate receptor, ionotrophic, AMPA
3b" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030616-53 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 HOVERGEN:HBG051839 KO:K05199 OMA:MVQQFLQ
OrthoDB:EOG4XKV68 EMBL:AL732632 EMBL:BX511226 EMBL:BX539334
EMBL:AF525746 IPI:IPI00510089 RefSeq:NP_938174.1 UniGene:Dr.14975
SMR:Q71E60 Ensembl:ENSDART00000043180 GeneID:368416 KEGG:dre:368416
CTD:368416 InParanoid:Q71E60 NextBio:20812912 Uniprot:Q71E60
Length = 883
Score = 92 (37.4 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 716 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRNAVNLAVLKL 774
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 775 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 834
Query: 703 RC 704
C
Sbjct: 835 FC 836
Score = 84 (34.6 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 24/91 (26%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P S++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 475 PETKSWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 534
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 535 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 565
Score = 73 (30.8 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 625 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 666
Score = 56 (24.8 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 24/116 (20%), Positives = 52/116 (44%)
Query: 258 RRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKY- 316
R + + G+TG ++F + +T + + R++G+W F + I+D ++
Sbjct: 346 RALKMVQVQGMTGNIQFDSFGRRTNYTIDVYEMKTGGPRKIGYWNEFERFVN-IMDQQFT 404
Query: 317 -NCSSMKDLGQVFWP--GAPW--YTPKGWTLPAKDQPLRIGVPIGSEFQQYVNVEY 367
+ SS+++ V AP+ Y L ++ V + SE ++V ++Y
Sbjct: 405 NDSSSVENRTIVVTTIMEAPYVMYKKNHMHLEGNEKYEGYCVDLASEIAKHVGIKY 460
>RGD|70958 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA 3"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0010226 "response to
lithium ion" evidence=IEP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043083 "synaptic
cleft" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060992 "response to
fungicide" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069
GO:GO:0060992 GO:GO:0010226 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
GO:GO:0032281 GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW
PDB:3LSX PDBsum:3LSW PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062
EMBL:M85036 IPI:IPI00195443 IPI:IPI00231095 PIR:C40170
RefSeq:NP_001106213.1 RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN
PDB:3DP4 PDB:3M3F PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8
PDB:4F1Y PDB:4F22 PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39
PDB:4F3B PDB:4F3G PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K
PDBsum:3O21 PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y
PDBsum:4F22 PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31
PDBsum:4F39 PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492
SMR:P19492 IntAct:P19492 MINT:MINT-86220 STRING:P19492
PhosphoSite:P19492 PRIDE:P19492 GeneID:29628 KEGG:rno:29628
UCSC:RGD:70958 BindingDB:P19492 ChEMBL:CHEMBL3504
EvolutionaryTrace:P19492 NextBio:609848 ArrayExpress:P19492
Genevestigator:P19492 GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 98 (39.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 87/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ +L + +A
Sbjct: 120 TPSFPTDADVQFVIQMRP---ALKGAILSLLSYYKWEKFVYLYDT--ERGFSVLQAIMEA 174
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 175 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 229
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 230 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 285
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 286 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 340
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 341 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 397
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 398 RFVPFSDQQISNDSSSSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 456
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 457 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 514
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 515 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 90 (36.7 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 721 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALGNAVNLAVLKL 779
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 780 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 839
Query: 703 RC 704
C
Sbjct: 840 FC 841
Score = 75 (31.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 560 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 618
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 619 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 671
>UNIPROTKB|P19492 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0043195 GO:GO:0032281
GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW PDB:3LSX PDBsum:3LSW
PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062 EMBL:M85036
IPI:IPI00195443 IPI:IPI00231095 PIR:C40170 RefSeq:NP_001106213.1
RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN PDB:3DP4 PDB:3M3F
PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8 PDB:4F1Y PDB:4F22
PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39 PDB:4F3B PDB:4F3G
PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K PDBsum:3O21
PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y PDBsum:4F22
PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31 PDBsum:4F39
PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492 SMR:P19492
IntAct:P19492 MINT:MINT-86220 STRING:P19492 PhosphoSite:P19492
PRIDE:P19492 GeneID:29628 KEGG:rno:29628 UCSC:RGD:70958
BindingDB:P19492 ChEMBL:CHEMBL3504 EvolutionaryTrace:P19492
NextBio:609848 ArrayExpress:P19492 Genevestigator:P19492
GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 98 (39.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 87/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ +L + +A
Sbjct: 120 TPSFPTDADVQFVIQMRP---ALKGAILSLLSYYKWEKFVYLYDT--ERGFSVLQAIMEA 174
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 175 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 229
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 230 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 285
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 286 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 340
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 341 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 397
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 398 RFVPFSDQQISNDSSSSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 456
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 457 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 514
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 515 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 90 (36.7 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 721 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALGNAVNLAVLKL 779
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 780 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 839
Query: 703 RC 704
C
Sbjct: 840 FC 841
Score = 75 (31.5 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 560 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 618
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 619 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 671
>ZFIN|ZDB-GENE-061207-27 [details] [associations]
symbol:grin2bb "glutamate receptor, ionotropic,
N-methyl D-aspartate 2B, genome duplicate b" species:7955 "Danio
rerio" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-061207-27 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX537268 EMBL:BX901927
EMBL:BX901961 IPI:IPI00508048 ProteinModelPortal:F1RDX3
Ensembl:ENSDART00000092613 Bgee:F1RDX3 Uniprot:F1RDX3
Length = 1770
Score = 135 (52.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ +V ++ L N VG + I
Sbjct: 538 GFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEE 597
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 598 RSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 657
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 658 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 717
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 718 AVIFLASYTANLAAFM 733
Score = 69 (29.3 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 33/145 (22%), Positives = 59/145 (40%)
Query: 560 NNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGP 616
NN + + S + + + + LKS K A + A + CK T+ +G
Sbjct: 776 NNYKEMHSYMTSF-HQKNVNEALHSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGY 834
Query: 617 TYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDISS 676
+ G G A K S +V A+L++ G++ ELE + C N ++ S
Sbjct: 835 IFATTGYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGI-CH--NEKNEVMSSQ 891
Query: 677 LSPSGFWVLFVLSGGISTIALVIFL 701
L +F + G ++L+ F+
Sbjct: 892 LDVDNMAGVFYMLGAAMALSLITFI 916
Score = 67 (28.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 33/162 (20%), Positives = 66/162 (40%)
Query: 12 ILGPQTSEET-SSVAE-IASKKQIPVLSFADATPNW--ATERWPFLLQASQNQLAQMKAI 67
+ G T +E + + + I+++ IP+L + A + Q + Q +
Sbjct: 172 VFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVM 231
Query: 68 AAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSE 124
I++ ++W+ VT Y I + ++ G E+ VL L S+
Sbjct: 232 LNIMEEYDWYIFSIVTTYYPGHQDFVNRIRSTVDNSF--VGWELEEVLLLDMSVDDGDSK 289
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
++K Q V +++ + E A +FE A+ + + Y WI
Sbjct: 290 IQNQMKKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWI 331
>UNIPROTKB|G3V8Y9 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V8Y9 Ensembl:ENSRNOT00000029031 Uniprot:G3V8Y9
Length = 888
Score = 96 (38.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 87/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ +L + +A
Sbjct: 120 TPSFPTDADVQFVIQMRP---ALKGAILSLLGYYKWEKFVYLYDT--ERGFSVLQAIMEA 174
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 175 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 229
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 230 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 285
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 286 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 340
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 341 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 397
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 398 RFVPFSDQQISNDSSSSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 456
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 457 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 514
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 515 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 569
Score = 92 (37.4 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 38/122 (31%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 721 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRNAVNLAVLKL 779
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ +V +
Sbjct: 780 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 839
Query: 703 RC 704
C
Sbjct: 840 FC 841
Score = 75 (31.5 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 560 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 618
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 619 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 671
>UNIPROTKB|Q05586 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IMP;IDA] [GO:0016595 "glutamate binding" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0045471 "response to ethanol"
evidence=IDA] [GO:0006812 "cation transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042391 "regulation
of membrane potential" evidence=IDA] [GO:0005262 "calcium channel
activity" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0008542 "visual
learning" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0018964 "propylene
metabolic process" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0043083 "synaptic cleft" evidence=ISS] [GO:0042165
"neurotransmitter binding" evidence=ISS] [GO:0043195 "terminal
bouton" evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0060076 "excitatory synapse" evidence=ISS] [GO:0070588 "calcium
ion transmembrane transport" evidence=IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0045471 GO:GO:0030054 GO:GO:0045211
GO:GO:0008021 GO:GO:0045944 GO:GO:0035235 GO:GO:0008542
GO:GO:0005509 GO:GO:0043195 DrugBank:DB00142 GO:GO:0030288
GO:GO:0005516 GO:GO:0043083 EMBL:AL929554 InterPro:IPR001828
GO:GO:0070588 GO:GO:0055074 GO:GO:0060076 Orphanet:178469 PDB:3BYA
PDBsum:3BYA DrugBank:DB01173 GO:GO:0016595 GO:GO:2000463
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
eggNOG:NOG282132 GO:GO:0016594 KO:K05208 InterPro:IPR018882
Pfam:PF10562 TCDB:1.A.10.1.6 CTD:2902 HOVERGEN:HBG052638
OrthoDB:EOG4CG07J EMBL:L13266 EMBL:L13267 EMBL:L13268 EMBL:D13515
EMBL:L05666 EMBL:AF015730 EMBL:AF015731 EMBL:Z32772 EMBL:Z32773
EMBL:Z32774 EMBL:U08106 EMBL:U08107 EMBL:S57708 IPI:IPI00011989
IPI:IPI00013915 IPI:IPI00335571 IPI:IPI00465228 IPI:IPI00470730
IPI:IPI00470731 IPI:IPI00646891 PIR:A46612 PIR:A47551
RefSeq:NP_000823.4 RefSeq:NP_001172019.1 RefSeq:NP_001172020.1
RefSeq:NP_015566.1 RefSeq:NP_067544.1 UniGene:Hs.558334 PDB:2NR1
PDBsum:2NR1 ProteinModelPortal:Q05586 SMR:Q05586 IntAct:Q05586
MINT:MINT-1900224 STRING:Q05586 PhosphoSite:Q05586 DMDM:548377
PaxDb:Q05586 PRIDE:Q05586 Ensembl:ENST00000315048
Ensembl:ENST00000371546 Ensembl:ENST00000371550
Ensembl:ENST00000371553 Ensembl:ENST00000371559
Ensembl:ENST00000371560 Ensembl:ENST00000371561 GeneID:2902
KEGG:hsa:2902 UCSC:uc004clk.3 UCSC:uc004cll.3 UCSC:uc004clm.3
GeneCards:GC09P140032 HGNC:HGNC:4584 HPA:CAB006831 MIM:138249
MIM:614254 neXtProt:NX_Q05586 PharmGKB:PA28978 OMA:VYRSAAM
PhylomeDB:Q05586 BindingDB:Q05586 ChEMBL:CHEMBL2015 ChiTaRS:GRIN1
EvolutionaryTrace:Q05586 GenomeRNAi:2902 NextBio:11487
PMAP-CutDB:Q5VSF3 ArrayExpress:Q05586 Bgee:Q05586 CleanEx:HS_GRIN1
Genevestigator:Q05586 GermOnline:ENSG00000176884 GO:GO:0018964
Uniprot:Q05586
Length = 938
Score = 111 (44.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 513 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 570
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 571 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 667
Score = 83 (34.3 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 64/309 (20%), Positives = 125/309 (40%)
Query: 2 DLMDSQKVEAIL--GPQTSEE---TSSVAEIASKKQIPVLSFADATPNWATERWPF-LLQ 55
DL+ SQ V AIL P T + + V+ A +IPVL ++ + L+
Sbjct: 81 DLISSQ-VYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLR 139
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP 115
Q +++ + W+ + ++ D D L L E ++ VL
Sbjct: 140 TVPPYSHQSSVWFEMMRVYSWNHIILLVSD-DHEGRAAQKRLETLLEERESKAEKVLQFD 198
Query: 116 HFPSSR-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSL 174
P ++ ++ L + K + RV ++ S + A ++ A + M Y+W+ +
Sbjct: 199 --PGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE----- 251
Query: 175 VHSINTSSIS-SMQGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAV 232
I+ +++ + GILG++ + + D + E E++N +P V
Sbjct: 252 -REISGNALRYAPDGILGLQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCV 309
Query: 233 QTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMG 292
+ +W K+ L +++L +D G+TG+VEF Y I+NL
Sbjct: 310 GNTN-IW--------KTGPLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQN 358
Query: 293 KSYRELGFW 301
+ ++G +
Sbjct: 359 RKLVQVGIY 367
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 320 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 373
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 374 PNDR--------KIIWPGGETEKPRGYQMSTR 397
Score = 69 (29.3 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 721 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 779
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 780 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 833
>UNIPROTKB|F1MCM2 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting
G-protein coupled glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:DAAA02009187 IPI:IPI00709026
Ensembl:ENSBTAT00000012214 Uniprot:F1MCM2
Length = 881
Score = 106 (42.4 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 73/328 (22%), Positives = 135/328 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 68 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 126
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEI-IHVLALPHFPSSRLSEE 125
+VQ +W TV+Y+D +TG+ L L A + I L L S L +E
Sbjct: 127 DLVQYLKWRSATVVYDD----STGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKE 182
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSI 183
+++ G + R+ + S +A + ++A M MM + Y I+ T D + + S +
Sbjct: 183 MKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV 239
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVW 239
+ + G R D P +++ +R A P ++ G + A YDAV
Sbjct: 240 N----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRAESGLLDGVMMTDAALLYDAVH 293
Query: 240 SVALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 294 IVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTD 351
Query: 285 --YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 352 FDLDIISLKEDGLEKVGVWSPAEGLNIT 379
Score = 88 (36.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 519 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 578
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 579 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Query: 566 QSSNAI 571
I
Sbjct: 639 AKQTKI 644
Score = 81 (33.6 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD ++K+L + V + I
Sbjct: 424 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTI 483
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 484 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 543
Query: 487 LIER 490
+I R
Sbjct: 544 VIAR 547
Score = 68 (29.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 697 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 755
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 756 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 800
>UNIPROTKB|F1SV43 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015277 "kainate selective glutamate receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting G-protein
coupled glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GeneTree:ENSGT00590000083056 OMA:EEQAFRF GO:GO:0001640
EMBL:FP104549 Ensembl:ENSSSCT00000004036 Uniprot:F1SV43
Length = 881
Score = 106 (42.4 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 73/328 (22%), Positives = 135/328 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 68 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 126
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEI-IHVLALPHFPSSRLSEE 125
+VQ +W TV+Y+D +TG+ L L A + I L L S L +E
Sbjct: 127 DLVQYLKWRSATVVYDD----STGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKE 182
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSI 183
+++ G + R+ + S +A + ++A M MM + Y I+ T D + + S +
Sbjct: 183 MKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV 239
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVW 239
+ + G R D P +++ +R A P ++ G + A YDAV
Sbjct: 240 N----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRAESGLLDGVMMTDAALLYDAVH 293
Query: 240 SVALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 294 IVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTD 351
Query: 285 --YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 352 FDLDIISLKEDGLEKVGVWSPAEGLNIT 379
Score = 88 (36.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 519 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 578
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 579 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 638
Query: 566 QSSNAI 571
I
Sbjct: 639 AKQTKI 644
Score = 81 (33.6 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD ++K+L + V + I
Sbjct: 424 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTI 483
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 484 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 543
Query: 487 LIER 490
+I R
Sbjct: 544 VIAR 547
Score = 68 (29.0 bits), Expect = 2.0e-08, Sum P(3) = 2.0e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 697 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 755
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 756 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 800
>UNIPROTKB|F1PWT6 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203 EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371
GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6
Length = 919
Score = 106 (42.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 73/328 (22%), Positives = 135/328 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEI-IHVLALPHFPSSRLSEE 125
+VQ +W TV+Y+D +TG+ L L A + I L L S L +E
Sbjct: 165 DLVQYLKWRSATVVYDD----STGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKE 220
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSI 183
+++ G + R+ + S +A + ++A M MM + Y I+ T D + + S +
Sbjct: 221 MKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV 277
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVW 239
+ + G R D P +++ +R A P ++ G + A YDAV
Sbjct: 278 N----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRAESGLLDGVMMTDAALLYDAVH 331
Query: 240 SVALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 332 IVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTD 389
Query: 285 --YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 390 FDLDIISLKEDGLEKVGVWSPAEGLNIT 417
Score = 88 (36.0 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 81 (33.6 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD ++K+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 68 (29.0 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>RGD|71027 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005887
"integral to plasma membrane" evidence=IEA;ISO] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor
signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled
glutamate receptor signaling pathway" evidence=ISO] [GO:0007268
"synaptic transmission" evidence=NAS] [GO:0008066 "glutamate
receptor activity" evidence=IDA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA;ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477
PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N
PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94
PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264 SMR:P42264
STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 104 (41.7 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 73/329 (22%), Positives = 135/329 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQS +W TV+Y+D +TG++ L + + I L + P S L
Sbjct: 165 DLVQSLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPIDSDDSRPLL 218
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + ++A M MM + Y I+ T D + + S ++
Sbjct: 219 KEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 278
Query: 185 SMQG--ILGV-RSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAV 238
+ G IL V +H K+ +R A P ++ G + A YDAV
Sbjct: 279 -LTGFRILNVDNAHVSAIVEKWS------MERLQAA-PRAESGLLDGVMMTDAALLYDAV 330
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT 284
V++ ++ S+ + + + I + ++GLTG++ F K + T
Sbjct: 331 HIVSVCYQRASQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRT 388
Query: 285 ---YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 389 DFDLDIISLKEDGLEKVGVWSPADGLNIT 417
Score = 88 (36.0 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 82 (33.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD +VK+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 69 (29.3 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>UNIPROTKB|P42264 [details] [associations]
symbol:Grik3 "Glutamate receptor ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2
UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94
PDB:4E0W PDB:4G8N PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93
PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264
SMR:P42264 STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 104 (41.7 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 73/329 (22%), Positives = 135/329 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQS +W TV+Y+D +TG++ L + + I L + P S L
Sbjct: 165 DLVQSLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPIDSDDSRPLL 218
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + ++A M MM + Y I+ T D + + S ++
Sbjct: 219 KEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 278
Query: 185 SMQG--ILGV-RSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAV 238
+ G IL V +H K+ +R A P ++ G + A YDAV
Sbjct: 279 -LTGFRILNVDNAHVSAIVEKWS------MERLQAA-PRAESGLLDGVMMTDAALLYDAV 330
Query: 239 WSVALAMEQKSE--------------KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT 284
V++ ++ S+ + + + I + ++GLTG++ F K + T
Sbjct: 331 HIVSVCYQRASQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRT 388
Query: 285 ---YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 389 DFDLDIISLKEDGLEKVGVWSPADGLNIT 417
Score = 88 (36.0 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 82 (33.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD +VK+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 69 (29.3 bits), Expect = 3.0e-08, Sum P(3) = 3.0e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYITQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>UNIPROTKB|A9Z1Z8 [details] [associations]
symbol:GRIK3 "Glutamate receptor, ionotropic, kainate 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 HSSP:P19491 EMBL:AL355386 EMBL:AC117945
RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899
KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203
GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210
IPI:IPI00646850 SMR:A9Z1Z8 STRING:A9Z1Z8 Ensembl:ENST00000373093
UCSC:uc001cba.1 Uniprot:A9Z1Z8
Length = 872
Score = 104 (41.7 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 70/327 (21%), Positives = 133/327 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQ +W TV+Y+D +TG++ L + + I L + P S L
Sbjct: 165 DLVQYLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPIDSDDSRPLL 218
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + ++A M MM + Y I+ T D + + S ++
Sbjct: 219 KEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 278
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVWS 240
+ G R D P +++ +R A P ++ G + A YDAV
Sbjct: 279 ----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRSESGLLDGVMMTDAALLYDAVHI 332
Query: 241 VALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT-- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 333 VSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTDF 390
Query: 285 -YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 391 DLDIISLKEDGLEKVGVWSPADGLNIT 417
Score = 88 (36.0 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 82 (33.9 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD +VK+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 68 (29.0 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>UNIPROTKB|F1PDR1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03003077 Ensembl:ENSCAFT00000028234
Uniprot:F1PDR1
Length = 806
Score = 82 (33.9 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 469 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 528
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 529 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 559
Score = 75 (31.5 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 618 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 676
Query: 590 TGAVF 594
AVF
Sbjct: 677 KIAVF 681
Score = 75 (31.5 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 33/98 (33%), Positives = 40/98 (40%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L V A+LK+
Sbjct: 709 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRNPVNLAVLKL 767
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGF 682
+E G L +L+ + E D S PSGF
Sbjct: 768 NEQGLLDKLKNKWWYDKG--ECGSGGGDSKRSRKPSGF 803
Score = 69 (29.3 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 346 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 382
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 259 TDTIPAKIMQQWKNSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 307
>UNIPROTKB|Q13003 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0007215 "glutamate receptor signaling
pathway" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042391 "regulation of membrane potential"
evidence=ISS;IDA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISS;IDA] [GO:0030424 "axon" evidence=ISS]
[GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0043195
"terminal bouton" evidence=ISS] [GO:0043204 "perikaryon"
evidence=ISS] [GO:0007216 "G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS;IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059
GO:GO:0051967 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391
GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH EMBL:U16127 EMBL:U16128 EMBL:AL355386
EMBL:AC117945 EMBL:S69349 IPI:IPI00011397 PIR:I59604
RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003
SMR:Q13003 STRING:Q13003 PhosphoSite:Q13003 DMDM:212276502
PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091
GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899
GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581
HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975
InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003
BindingDB:Q13003 ChEMBL:CHEMBL3684 GenomeRNAi:2899 NextBio:11475
ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3
Genevestigator:Q13003 GermOnline:ENSG00000163873 GO:GO:0001640
Uniprot:Q13003
Length = 919
Score = 104 (41.7 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 70/327 (21%), Positives = 133/327 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQ +W TV+Y+D +TG++ L + + I L + P S L
Sbjct: 165 DLVQYLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPIDSDDSRPLL 218
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + ++A M MM + Y I+ T D + + S ++
Sbjct: 219 KEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 278
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVWS 240
+ G R D P +++ +R A P ++ G + A YDAV
Sbjct: 279 ----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRSESGLLDGVMMTDAALLYDAVHI 332
Query: 241 VALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT-- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 333 VSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTDF 390
Query: 285 -YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 391 DLDIISLKEDGLEKVGVWSPADGLNIT 417
Score = 88 (36.0 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 82 (33.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD +VK+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 68 (29.0 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>TIGR_CMR|SPO_3335 [details] [associations]
symbol:SPO_3335 "glutamine ABC transporter, periplasmic
glutamine-binding protein" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0006868 "glutamine transport" evidence=ISS] [GO:0015186
"L-glutamine transmembrane transporter activity" evidence=ISS]
[GO:0016597 "amino acid binding" evidence=ISS] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00062 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0035235 GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 KO:K02030
RefSeq:YP_168531.1 ProteinModelPortal:Q5LN77 GeneID:3194025
KEGG:sil:SPO3335 PATRIC:23380121 HOGENOM:HOG000123673 OMA:LIWLAER
ProtClustDB:CLSK751639 Uniprot:Q5LN77
Length = 361
Score = 157 (60.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 50/198 (25%), Positives = 96/198 (48%)
Query: 378 GFSIELFKALVEKLPFYLPYNFIPFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADF 437
GFS++L AL +KL L Y + + D++ + + +++I A R DF
Sbjct: 54 GFSMDLLAALADKLG--LGYT-LERKEKFSDMLAAVMDGEADMAIANISITAARETEMDF 110
Query: 438 THPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVA---VISIYNGFVVWLIERNHWP 494
+ P ESGL ++ P + + +LL +R +++ + VI + G ++W ER P
Sbjct: 111 SQPIFESGLQILVPAETNAGSSLLRAL-LSRDLFLAIGAAFVILLTGGMLMWYFERRAQP 169
Query: 495 ELTGSALHQTG-TFFWLSFNL--HG---EKL-HSNLSRMTTLVWLFVALVISQTYTANLT 547
LH+ FW + NL +G E++ + R+ ++ + +L + +TA +T
Sbjct: 170 YFDRK-LHEAWFPSFWWALNLVVNGGFEERVPRTAFGRLFGVLLVISSLFVVSVFTARIT 228
Query: 548 SMLTARGLEPTVNNIETL 565
S++T + +VN++ L
Sbjct: 229 SVMTVEAISGSVNSVNDL 246
>UNIPROTKB|J9NWC8 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000044506 Uniprot:J9NWC8
Length = 730
Score = 111 (44.1 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 305 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 362
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 363 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 422
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 423 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 459
Score = 76 (31.8 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 112 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 165
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 166 PNDR--------KIIWPGGETEKPRGYQMSTR 189
Score = 69 (29.3 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 513 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 571
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 572 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 625
Score = 60 (26.2 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 7 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 60
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 61 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 110
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 111 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 159
>UNIPROTKB|F1P2K1 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00819235
Ensembl:ENSGALT00000040367 Uniprot:F1P2K1
Length = 797
Score = 111 (44.1 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 447 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 504
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 505 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 564
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 565 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 601
Score = 74 (31.1 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S +G+TG+VEF Y I+NL + ++G + G S+ + +
Sbjct: 256 LFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-G---SNVLTN 311
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+ ++ WPG P+G+ + K
Sbjct: 312 DR----------KIIWPGGETEKPQGYQMSTK 333
Score = 72 (30.4 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 26/117 (22%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V A+LK
Sbjct: 655 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLAILKS 713
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 714 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 767
Score = 57 (25.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 31/171 (18%), Positives = 69/171 (40%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + G++G
Sbjct: 151 EARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGE------REISGNALRYAPDGVIG 204
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + + +E+ P T +W K+
Sbjct: 205 LQLINGKNESAHISDAVAVVAQAVHDLFEKENITDPPRGCVGNTN--IW--------KTG 254
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L S+ G+TG+VEF Y I+NL + ++G +
Sbjct: 255 PLFKRVLMSSKYSE--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 303
>MGI|MGI:95819 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, NMDA1 (zeta 1)"
species:10090 "Mus musculus" [GO:0001661 "conditioned taste
aversion" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IGI;IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005102 "receptor binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=IGI] [GO:0005262 "calcium channel activity"
evidence=IGI;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=ISO;IGI] [GO:0006816 "calcium ion
transport" evidence=IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0007612 "learning" evidence=IMP] [GO:0007613 "memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008306
"associative learning" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0008542 "visual learning" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010646 "regulation of
cell communication" evidence=IMP] [GO:0010942 "positive regulation
of cell death" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IC;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO;IMP] [GO:0016595 "glutamate binding"
evidence=ISO] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISO;IPI] [GO:0018964 "propylene
metabolic process" evidence=IDA] [GO:0019233 "sensory perception of
pain" evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021586 "pons maturation" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030426 "growth cone" evidence=NAS] [GO:0032590 "dendrite
membrane" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IDA] [GO:0035176 "social behavior" evidence=IMP]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IMP;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043083 "synaptic cleft" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IMP] [GO:0043523 "regulation of neuron apoptotic process"
evidence=IGI;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IGI;IMP] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=IMP] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IMP] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048511 "rhythmic
process" evidence=ISO] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0050905 "neuromuscular process"
evidence=IMP] [GO:0051262 "protein tetramerization" evidence=ISO]
[GO:0051963 "regulation of synapse assembly" evidence=IMP]
[GO:0055074 "calcium ion homeostasis" evidence=IDA] [GO:0060076
"excitatory synapse" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060134 "prepulse inhibition" evidence=IMP] [GO:0060179 "male
mating behavior" evidence=IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO;IGI;IDA] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95819 GO:GO:0021987 GO:GO:0008355 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0019233 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0045944
GO:GO:0008344 GO:GO:0001967 GO:GO:0008542 GO:GO:0007616
GO:GO:0005509 GO:GO:0060079 GO:GO:0001975 GO:GO:0043524
GO:GO:0060134 GO:GO:0035249 GO:GO:0030288 GO:GO:0030426
GO:GO:0043065 GO:GO:0005516 GO:GO:0050770 GO:GO:0048814
GO:GO:0007585 GO:GO:0006874 GO:GO:0001661 GO:GO:0051963
GO:GO:0035176 EMBL:AL732309 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GeneTree:ENSGT00700000104113 GO:GO:0060179
GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562 CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 GO:GO:0018964 EMBL:D10028
EMBL:BC039157 IPI:IPI00118385 IPI:IPI00608056 PIR:S21104
RefSeq:NP_001171127.1 RefSeq:NP_001171128.1 RefSeq:NP_032195.1
UniGene:Mm.278672 ProteinModelPortal:P35438 SMR:P35438
DIP:DIP-31577N IntAct:P35438 MINT:MINT-135802 STRING:P35438
PhosphoSite:P35438 PaxDb:P35438 PRIDE:P35438
Ensembl:ENSMUST00000028335 Ensembl:ENSMUST00000114312 GeneID:14810
KEGG:mmu:14810 UCSC:uc008iri.2 UCSC:uc008irk.2 BindingDB:P35438
ChEMBL:CHEMBL2895 NextBio:286995 Bgee:P35438 CleanEx:MM_GRIN1
Genevestigator:P35438 GermOnline:ENSMUSG00000026959 GO:GO:0021586
Uniprot:P35438
Length = 938
Score = 111 (44.1 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 513 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 570
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 571 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 667
Score = 79 (32.9 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 62/309 (20%), Positives = 125/309 (40%)
Query: 2 DLMDSQKVEAIL--GPQTSEE---TSSVAEIASKKQIPVLSFADATPNWATERWPF-LLQ 55
DL+ SQ V AIL P T + + V+ A +IPVL ++ + L+
Sbjct: 81 DLISSQ-VYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLR 139
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP 115
Q +++ + W+ + ++ D D L L E ++ VL
Sbjct: 140 TVPPYSHQSSVWFEMMRVYNWNHIILLVSD-DHEGRAAQKRLETLLEERESKAEKVLQFD 198
Query: 116 HFPSSR-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSL 174
P ++ ++ L + + + RV ++ S + A ++ A + M Y+W+ +
Sbjct: 199 --PGTKNVTALLMEARDLEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE----- 251
Query: 175 VHSINTSSIS-SMQGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAV 232
I+ +++ + GI+G++ + + D + E E++N +P V
Sbjct: 252 -REISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCV 309
Query: 233 QTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMG 292
+ +W K+ L +++L +D G+TG+VEF Y I+NL
Sbjct: 310 GNTN-IW--------KTGPLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQN 358
Query: 293 KSYRELGFW 301
+ ++G +
Sbjct: 359 RKLVQVGIY 367
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 320 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 373
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 374 PNDR--------KIIWPGGETEKPRGYQMSTR 397
Score = 69 (29.3 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 721 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 779
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 780 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 833
>FB|FBgn0039927 [details] [associations]
symbol:CG11155 species:7227 "Drosophila melanogaster"
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0006811 "ion transport" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0060025 "regulation of synaptic activity"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0016020 GO:GO:0030054
GO:GO:0045211 GO:GO:0030288 InterPro:IPR001828 EMBL:AE014135
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
FlyBase:FBgn0039927 UniGene:Dm.10449 GeneID:43822
KEGG:dme:Dmel_CG11155 GenomeRNAi:43822 NextBio:836052 EMBL:BT044556
RefSeq:NP_651941.2 RefSeq:NP_726649.2 SMR:Q9V4A0
EnsemblMetazoa:FBtr0089195 EnsemblMetazoa:FBtr0333701
UCSC:CG11155-RA UCSC:CG11155-RC InParanoid:Q9V4A0 OMA:DIPHIEV
Uniprot:Q9V4A0
Length = 910
Score = 120 (47.3 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 41/144 (28%), Positives = 67/144 (46%)
Query: 358 EFQQYVNVEYDE-LRNFTYFGGFSIELFKALVEKLPF-Y----LPYN----FIPFNGSYD 407
E + YV V+ D+ L F GF I+L KA+ ++ F Y +P N +IP S++
Sbjct: 433 EERPYVMVKEDKNLTGNLRFEGFCIDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWN 492
Query: 408 DLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPF 466
+V++L V + I R DFT P+ G+ ++F V S L F+ P
Sbjct: 493 GIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTSQPTRLFSFMNPL 552
Query: 467 TRAVWILVAVISIYNGFVVWLIER 490
+W+ V I F ++++ R
Sbjct: 553 AIEIWLYVLAAYILVSFALFVMAR 576
Score = 75 (31.5 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 622 GLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIAS--EKCMEVNLHDDDDISSLSP 679
G G A PKGSP + A+L++ E G ++ L + + C + + ++L
Sbjct: 756 GYGIATPKGSPWRDKISLAILELQEKGIIQILYDKWWKNTGDVCNRDDKSKESKANALGV 815
Query: 680 SGFWVLFV-LSGGISTIALVIFLWRCNWKINENLLVNKKIRC 720
+FV L G++ +A+V+ ++ W +NL + C
Sbjct: 816 ENIGGVFVVLLCGLA-LAVVVAIFEFCWNSRKNLNTENQSLC 856
Score = 55 (24.4 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 266 DGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW--TYGLGFSD 309
DGLTG V+F+ + I+ L + +++G+W G+ SD
Sbjct: 369 DGLTGTVQFVEGR-RNIFKLDILKLKQEKIQKVGYWHPDDGVNISD 413
Score = 49 (22.3 bits), Expect = 4.9e-08, Sum P(4) = 4.9e-08
Identities = 20/77 (25%), Positives = 31/77 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V+AI GP + S V I IP + + ++ + L S L A
Sbjct: 108 VQAIFGPTDALLASHVQSICEAYDIPHIE-GRIDLEYNSKEFSINLYPSHTLLTL--AYR 164
Query: 69 AIVQSWEWHQVTVIYED 85
I+ W +V +IYE+
Sbjct: 165 DIMVYLNWTKVAIIYEE 181
>UNIPROTKB|Q38PU2 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9541 "Macaca fascicularis" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISS] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0007196 "adenylate cyclase-inhibiting G-protein
coupled glutamate receptor signaling pathway" evidence=ISS]
[GO:0007216 "G-protein coupled glutamate receptor signaling
pathway" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043197
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
HSSP:P22756 GO:GO:0001640 EMBL:DQ159935 ProteinModelPortal:Q38PU2
SMR:Q38PU2 Uniprot:Q38PU2
Length = 919
Score = 103 (41.3 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 70/327 (21%), Positives = 133/327 (40%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 164
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQ +W TV+Y+D +TG++ L + + I L + P S L
Sbjct: 165 DLVQYLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPVDSDDSRPLL 218
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + ++A M MM + Y I+ T D + + S ++
Sbjct: 219 KEMKRGREFRIIFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 278
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVWS 240
+ G R D P +++ +R A P ++ G + A YDAV
Sbjct: 279 ----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRAESGLLDGVMMTDAALLYDAVHI 332
Query: 241 VALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT-- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 333 VSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTDF 390
Query: 285 -YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 391 DLDIISLKEDGLEKVGVWSPADGLNIT 417
Score = 88 (36.0 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 557 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 616
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 617 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 676
Query: 566 QSSNAI 571
I
Sbjct: 677 AKQTKI 682
Score = 82 (33.9 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 30/124 (24%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD +VK+L + V + I
Sbjct: 462 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTI 521
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 522 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 581
Query: 487 LIER 490
+I R
Sbjct: 582 VIAR 585
Score = 68 (29.0 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
Identities = 26/108 (24%), Positives = 43/108 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 735 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 793
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGISTIALV 698
++ C E ++ + S+L +F VL+ G+ LV
Sbjct: 794 IMKEKWWRGSGCPE---EENKEASALGIQKIGGIFIVLAAGLVLSVLV 838
>ZFIN|ZDB-GENE-020125-1 [details] [associations]
symbol:gria1a "glutamate receptor, ionotropic, AMPA
1a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05197 EMBL:AF525741
IPI:IPI00512681 RefSeq:NP_991161.1 UniGene:Dr.88082
ProteinModelPortal:Q71E65 SMR:Q71E65 GeneID:798689 KEGG:dre:798689
CTD:798689 InParanoid:Q71E65 NextBio:20933517 Uniprot:Q71E65
Length = 914
Score = 100 (40.3 bits), Expect = 5.4e-08, Sum P(4) = 5.4e-08
Identities = 40/122 (32%), Positives = 53/122 (43%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGSPL V A+LK+
Sbjct: 728 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSPLRNPVNLAVLKL 786
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
+E G L +L+ + +C D S+LS S V ++L GG+ LV +
Sbjct: 787 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVE 846
Query: 703 RC 704
C
Sbjct: 847 FC 848
Score = 74 (31.1 bits), Expect = 5.4e-08, Sum P(4) = 5.4e-08
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT + + + E L I Y + R
Sbjct: 637 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI-AYGTLDAGSTKEFFRRS 695
Query: 590 TGAVF 594
AVF
Sbjct: 696 KIAVF 700
Score = 73 (30.8 bits), Expect = 5.4e-08, Sum P(4) = 5.4e-08
Identities = 21/86 (24%), Positives = 37/86 (43%)
Query: 406 YDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
++ +V +L V + I R + DF+ P+ G+ +MI KS FL
Sbjct: 472 WNGMVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLD 531
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 532 PLAYEIWMCIVFAYIGVSVVLFLVSR 557
Score = 53 (23.7 bits), Expect = 5.4e-08, Sum P(4) = 5.4e-08
Identities = 12/57 (21%), Positives = 29/57 (50%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDT 310
Q+ L+++ + +GLTG ++F + ++ ++ L +++G+W F T
Sbjct: 336 QRALQQVRI---EGLTGHIQFNEKGRRTNYSISVMELRPTGPKKVGYWNEDEKFVST 389
Score = 41 (19.5 bits), Expect = 7.9e-07, Sum P(4) = 7.9e-07
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 264 DFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
+FD KV K A TY + +M +++ L
Sbjct: 271 EFDNKDAKVPKRRLKYTGALTYDGVKVMSTAFQNL 305
>UNIPROTKB|F1NKY9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00821429
Ensembl:ENSGALT00000014471 Uniprot:F1NKY9
Length = 856
Score = 111 (44.1 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 447 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 504
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 505 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 564
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 565 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 601
Score = 74 (31.1 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S +G+TG+VEF Y I+NL + ++G + G S+ + +
Sbjct: 256 LFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-G---SNVLTN 311
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+ ++ WPG P+G+ + K
Sbjct: 312 DR----------KIIWPGGETEKPQGYQMSTK 333
Score = 72 (30.4 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 26/117 (22%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V A+LK
Sbjct: 655 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLAILKS 713
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 714 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 767
Score = 57 (25.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 31/171 (18%), Positives = 69/171 (40%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + G++G
Sbjct: 151 EARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGE------REISGNALRYAPDGVIG 204
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + + +E+ P T +W K+
Sbjct: 205 LQLINGKNESAHISDAVAVVAQAVHDLFEKENITDPPRGCVGNTN--IW--------KTG 254
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L S+ G+TG+VEF Y I+NL + ++G +
Sbjct: 255 PLFKRVLMSSKYSE--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 303
>RGD|2736 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, N-methyl D-aspartate
1" species:10116 "Rattus norvegicus" [GO:0001661 "conditioned taste
aversion" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IDA;TAS]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP;IDA;TAS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO] [GO:0005262 "calcium channel activity"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0006812
"cation transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA;ISO] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA;ISO] [GO:0007611 "learning or memory" evidence=ISO;TAS]
[GO:0007612 "learning" evidence=ISO] [GO:0007613 "memory"
evidence=ISO] [GO:0007616 "long-term memory" evidence=IEA;ISO]
[GO:0008021 "synaptic vesicle" evidence=IEA;ISO] [GO:0008306
"associative learning" evidence=ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0008355 "olfactory learning"
evidence=IEA;ISO] [GO:0008542 "visual learning" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0010646 "regulation
of cell communication" evidence=ISO] [GO:0010942 "positive regulation
of cell death" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016594 "glycine binding"
evidence=ISO;IDA] [GO:0016595 "glutamate binding" evidence=ISO;IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA;TAS] [GO:0018964 "propylene metabolic
process" evidence=IEA;ISO] [GO:0019233 "sensory perception of pain"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021586 "pons maturation" evidence=IEA;ISO] [GO:0021987 "cerebral
cortex development" evidence=IEA;ISO] [GO:0022843 "voltage-gated
cation channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032590
"dendrite membrane" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0035254 "glutamate
receptor binding" evidence=IPI] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IEA;ISO] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=ISO] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA;ISO]
[GO:0048511 "rhythmic process" evidence=IDA] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IEA;ISO] [GO:0050770 "regulation
of axonogenesis" evidence=IEA;ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051592 "response to calcium ion" evidence=IEP]
[GO:0051963 "regulation of synapse assembly" evidence=IEA;ISO]
[GO:0055074 "calcium ion homeostasis" evidence=ISO] [GO:0060076
"excitatory synapse" evidence=IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060134
"prepulse inhibition" evidence=IEA;ISO] [GO:0060179 "male mating
behavior" evidence=IEA;ISO] [GO:0060992 "response to fungicide"
evidence=IEP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2736 GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288 GO:GO:0007611
GO:GO:0014070 GO:GO:0043083 GO:GO:0010942 GO:GO:0032590
InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076 GO:GO:0016595
GO:GO:2000463 GO:GO:0071287 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GeneTree:ENSGT00700000104113
GO:GO:0022843 GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562
PDB:2A5T PDBsum:2A5T CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638
OMA:VYRSAAM EMBL:X63255 EMBL:AY157515 EMBL:U08261 EMBL:U08262
EMBL:U08263 EMBL:U08264 EMBL:U08265 EMBL:U08267 EMBL:U08268
EMBL:S39217 EMBL:S39218 EMBL:S39219 EMBL:S39220 EMBL:S39221
EMBL:X65227 IPI:IPI00198625 IPI:IPI00231254 IPI:IPI00231255
IPI:IPI00231256 IPI:IPI00231257 IPI:IPI00231259 IPI:IPI00389747
PIR:JN0336 PIR:JN0337 PIR:JN0338 PIR:JN0339 PIR:JN0340 PIR:JN0341
PIR:JN0342 PIR:S19710 RefSeq:NP_001257531.1 RefSeq:NP_001257532.1
RefSeq:NP_001257534.1 RefSeq:NP_001257537.1 RefSeq:NP_001257539.1
RefSeq:NP_058706.1 UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9
PDB:1PBQ PDB:1Y1M PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8
PDBsum:1PB9 PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20
PDBsum:3Q41 ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N
IntAct:P35439 MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439
PRIDE:P35439 Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408 UCSC:RGD:2736
BindingDB:P35439 ChEMBL:CHEMBL330 EvolutionaryTrace:P35439
NextBio:603223 ArrayExpress:P35439 Genevestigator:P35439
GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 111 (44.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 513 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 570
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 571 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 667
Score = 78 (32.5 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 62/309 (20%), Positives = 125/309 (40%)
Query: 2 DLMDSQKVEAIL--GPQTSEE---TSSVAEIASKKQIPVLSFADATPNWATERWPF-LLQ 55
DL+ SQ V AIL P T + + V+ A +IPVL ++ + L+
Sbjct: 81 DLISSQ-VYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLR 139
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP 115
Q +++ + W+ + ++ D D L L E ++ VL
Sbjct: 140 TVPPYSHQSSVWFEMMRVYNWNHIILLVSD-DHEGRAAQKRLETLLEERESKAEKVLQFD 198
Query: 116 HFPSSR-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSL 174
P ++ ++ L + + + RV ++ S + A ++ A + M Y+W+ +
Sbjct: 199 --PGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE----- 251
Query: 175 VHSINTSSIS-SMQGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAV 232
I+ +++ + GI+G++ + + D + E E++N +P V
Sbjct: 252 -REISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCV 309
Query: 233 QTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMG 292
+ +W K+ L +++L +D G+TG+VEF Y I+NL
Sbjct: 310 GNTN-IW--------KTGPLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQN 358
Query: 293 KSYRELGFW 301
+ ++G +
Sbjct: 359 RKLVQVGIY 367
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 320 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 373
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 374 PNDR--------KIIWPGGETEKPRGYQMSTR 397
Score = 69 (29.3 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 721 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 779
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 780 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 833
>UNIPROTKB|P35439 [details] [associations]
symbol:Grin1 "Glutamate receptor ionotropic, NMDA 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2736
GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288
GO:GO:0007611 GO:GO:0014070 GO:GO:0043083 GO:GO:0010942
GO:GO:0032590 InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076
GO:GO:0016595 GO:GO:2000463 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0022843 GO:GO:0004972 KO:K05208
InterPro:IPR018882 Pfam:PF10562 PDB:2A5T PDBsum:2A5T CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:X63255
EMBL:AY157515 EMBL:U08261 EMBL:U08262 EMBL:U08263 EMBL:U08264
EMBL:U08265 EMBL:U08267 EMBL:U08268 EMBL:S39217 EMBL:S39218
EMBL:S39219 EMBL:S39220 EMBL:S39221 EMBL:X65227 IPI:IPI00198625
IPI:IPI00231254 IPI:IPI00231255 IPI:IPI00231256 IPI:IPI00231257
IPI:IPI00231259 IPI:IPI00389747 PIR:JN0336 PIR:JN0337 PIR:JN0338
PIR:JN0339 PIR:JN0340 PIR:JN0341 PIR:JN0342 PIR:S19710
RefSeq:NP_001257531.1 RefSeq:NP_001257532.1 RefSeq:NP_001257534.1
RefSeq:NP_001257537.1 RefSeq:NP_001257539.1 RefSeq:NP_058706.1
UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9 PDB:1PBQ PDB:1Y1M
PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8 PDBsum:1PB9
PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20 PDBsum:3Q41
ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N IntAct:P35439
MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439 PRIDE:P35439
Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408
UCSC:RGD:2736 BindingDB:P35439 ChEMBL:CHEMBL330
EvolutionaryTrace:P35439 NextBio:603223 ArrayExpress:P35439
Genevestigator:P35439 GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 111 (44.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 513 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 570
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 571 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 630
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 631 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 667
Score = 78 (32.5 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 62/309 (20%), Positives = 125/309 (40%)
Query: 2 DLMDSQKVEAIL--GPQTSEE---TSSVAEIASKKQIPVLSFADATPNWATERWPF-LLQ 55
DL+ SQ V AIL P T + + V+ A +IPVL ++ + L+
Sbjct: 81 DLISSQ-VYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLR 139
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALP 115
Q +++ + W+ + ++ D D L L E ++ VL
Sbjct: 140 TVPPYSHQSSVWFEMMRVYNWNHIILLVSD-DHEGRAAQKRLETLLEERESKAEKVLQFD 198
Query: 116 HFPSSR-LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSL 174
P ++ ++ L + + + RV ++ S + A ++ A + M Y+W+ +
Sbjct: 199 --PGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE----- 251
Query: 175 VHSINTSSIS-SMQGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAV 232
I+ +++ + GI+G++ + + D + E E++N +P V
Sbjct: 252 -REISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCV 309
Query: 233 QTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMG 292
+ +W K+ L +++L +D G+TG+VEF Y I+NL
Sbjct: 310 GNTN-IW--------KTGPLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQN 358
Query: 293 KSYRELGFW 301
+ ++G +
Sbjct: 359 RKLVQVGIY 367
Score = 76 (31.8 bits), Expect = 9.5e-08, Sum P(3) = 9.5e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 320 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 373
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 374 PNDR--------KIIWPGGETEKPRGYQMSTR 397
Score = 69 (29.3 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 721 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 779
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 780 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 833
>UNIPROTKB|F1P2J9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00586084
ProteinModelPortal:F1P2J9 Ensembl:ENSGALT00000040369 Uniprot:F1P2J9
Length = 880
Score = 111 (44.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 426 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 483
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 484 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 543
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 544 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 580
Score = 74 (31.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S +G+TG+VEF Y I+NL + ++G + G S+ + +
Sbjct: 235 LFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-G---SNVLTN 290
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+ ++ WPG P+G+ + K
Sbjct: 291 DR----------KIIWPGGETEKPQGYQMSTK 312
Score = 74 (31.1 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 44/235 (18%), Positives = 95/235 (40%)
Query: 70 IVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSR-LSEELEK 128
+++ + W+ V +I D D L L E ++ VL P ++ ++ L +
Sbjct: 69 MMRVFNWNHVILIVSD-DHEGRAAQKKLETLLEERESKAEKVLQFD--PGTKNVTSLLLE 125
Query: 129 LKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQ 187
K + RV ++ S + A ++ A + M Y+W+ + I+ +++ +
Sbjct: 126 AKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGE------REISGNALRYAPD 179
Query: 188 GILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAME 246
G++G++ + + D + + +E+ P T +W
Sbjct: 180 GVIGLQLINGKNESAHISDAVAVVAQAVHDLFEKENITDPPRGCVGNTN--IW------- 230
Query: 247 QKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
K+ L +++L S+ G+TG+VEF Y I+NL + ++G +
Sbjct: 231 -KTGPLFKRVLMSSKYSE--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 282
Score = 72 (30.4 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 26/117 (22%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V A+LK
Sbjct: 634 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLAILKS 692
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 693 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 746
>UNIPROTKB|F1P2J8 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 OMA:VYRSAAM EMBL:AADN02026958 IPI:IPI00639787
ProteinModelPortal:F1P2J8 Ensembl:ENSGALT00000040370 Uniprot:F1P2J8
Length = 901
Score = 111 (44.1 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 447 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 504
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 505 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 564
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 565 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 601
Score = 74 (31.1 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 23/92 (25%), Positives = 43/92 (46%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S +G+TG+VEF Y I+NL + ++G + G S+ + +
Sbjct: 256 LFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYN-G---SNVLTN 311
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+ ++ WPG P+G+ + K
Sbjct: 312 DR----------KIIWPGGETEKPQGYQMSTK 333
Score = 72 (30.4 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 26/117 (22%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V A+LK
Sbjct: 655 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLAILKS 713
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 714 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 767
Score = 57 (25.1 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 31/171 (18%), Positives = 69/171 (40%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + G++G
Sbjct: 151 EARVIILSASEDDAATVYRSAAMLNMTGSGYVWLVGE------REISGNALRYAPDGVIG 204
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + + +E+ P T +W K+
Sbjct: 205 LQLINGKNESAHISDAVAVVAQAVHDLFEKENITDPPRGCVGNTN--IW--------KTG 254
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L S+ G+TG+VEF Y I+NL + ++G +
Sbjct: 255 PLFKRVLMSSKYSE--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 303
>ZFIN|ZDB-GENE-030904-5 [details] [associations]
symbol:gabbr1a "gamma-aminobutyric acid (GABA) B
receptor, 1a" species:7955 "Danio rerio" [GO:0004965 "G-protein
coupled GABA receptor activity" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004930
"G-protein coupled receptor activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS50259 Pfam:PF01094 ZFIN:ZDB-GENE-030904-5 GO:GO:0016021
InterPro:IPR001828 InterPro:IPR000436 Pfam:PF00084 SMART:SM00032
SUPFAM:SSF57535 PROSITE:PS50923 GO:GO:0004965
GeneTree:ENSGT00530000063129 EMBL:BX629344 EMBL:FP017181
EMBL:FP102072 IPI:IPI00511709 Ensembl:ENSDART00000009892
ArrayExpress:F1RDY7 Bgee:F1RDY7 Uniprot:F1RDY7
Length = 984
Score = 161 (61.7 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 64/271 (23%), Positives = 116/271 (42%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
DL+ ++ ++ +L P S ++ VAE A + V S+ ++P + +R+P + +
Sbjct: 222 DLLYTEPIKIVLMPGCSSVSTLVAEAARMWNLIVFSYGSSSPALSNRQRFPTFFRTHPSA 281
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ Q WEW ++ I + + T L L + ++EA EI + P+
Sbjct: 282 TLHNPTRVRLFQKWEWTKIATIQQTTEVF-TSTLDDLEERVKEANIEISVRQSFLTDPAV 340
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
+ + LK R+ +V L E A +F + K K+ K Y+W + I
Sbjct: 341 AV----KNLKRQDARI-IVGLFYETEARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKIK 395
Query: 180 TSSIS-SMQGIL-GVRSHFPED----KPKF---------QDFCKRFRKRFGAEYPEEDNN 224
+I+ +++ + V H + P+ Q+F + R G + PEE
Sbjct: 396 DPAINCTVENMTEAVEGHITTEIVMLNPETVRGASNLTSQEFIAQLMSRLGGKNPEETGG 455
Query: 225 HEPGALAVQTYDAVWSVALAMEQKSEKLNQK 255
+ LA YDAVW++ALA+ + L K
Sbjct: 456 FQEAPLA---YDAVWALALALNKTVAPLRAK 483
>UNIPROTKB|F1PY46 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000031011 Uniprot:F1PY46
Length = 921
Score = 111 (44.1 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 512 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 569
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 570 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 629
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 630 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 666
Score = 76 (31.8 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 319 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 372
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 373 PNDR--------KIIWPGGETEKPRGYQMSTR 396
Score = 69 (29.3 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 720 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 778
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 779 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 832
Score = 60 (26.2 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 214 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 267
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 268 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 317
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 318 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 366
>UNIPROTKB|Q5VSF9 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOGENOM:HOG000231491 HOVERGEN:HBG052638 UniGene:Hs.558334
HGNC:HGNC:4584 ChiTaRS:GRIN1 IPI:IPI00647309 SMR:Q5VSF9
STRING:Q5VSF9 Ensembl:ENST00000371555 Uniprot:Q5VSF9
Length = 922
Score = 111 (44.1 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 534 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 591
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 592 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 651
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 652 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 688
Score = 76 (31.8 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 341 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 394
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 395 PNDR--------KIIWPGGETEKPRGYQMSTR 418
Score = 69 (29.3 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 742 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 800
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 801 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 854
Score = 63 (27.2 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 37/178 (20%), Positives = 75/178 (42%)
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS- 184
L + K + RV ++ S + A ++ A + M Y+W+ + I+ +++
Sbjct: 229 LMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRY 282
Query: 185 SMQGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVAL 243
+ GILG++ + + D + E E++N +P V + +W
Sbjct: 283 APDGILGLQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW---- 336
Query: 244 AMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
K+ L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 337 ----KTGPLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 388
>UNIPROTKB|B4KD90 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7230 "Drosophila mojavensis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH933806 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001999411.1
ProteinModelPortal:B4KD90 EnsemblMetazoa:FBtr0175219 GeneID:6573325
KEGG:dmo:Dmoj_GI24494 FlyBase:FBgn0147216 InParanoid:B4KD90
Uniprot:B4KD90
Length = 980
Score = 129 (50.5 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 45/167 (26%), Positives = 79/167 (47%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISI 479
+V + I R +Y +F+ P+ G+ I + S + TL+ FL+PF+ +WILV V
Sbjct: 524 IVAPLTINPERAEYIEFSKPFKYQGIT-ILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 582
Query: 480 YNGFVVWLIER---------NHWPELTGSALHQTGT--FFW---LSFNLHGEKLHSNLS- 524
V++L++R +H AL+ + F W L+ + GE + S
Sbjct: 583 VVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAIWFAWGVLLNSGI-GEGTPRSFSA 641
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
R+ +VW A++I +YTANL + L + ++ I + N +
Sbjct: 642 RVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 688
Score = 87 (35.7 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 123 SEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSS 182
+E L +K Q RV++V+ S E A +F A + M + ++WI T+ +H+ NT
Sbjct: 221 TEHLIDMKTAQSRVYLVYASTEDAQVIFRDAAEYNMTGEGHVWIVTE---QALHAKNTPD 277
Query: 183 ISSMQGILGVR-SHFPEDKPKFQD 205
G LG++ H DK +D
Sbjct: 278 -----GALGLQLEHAHSDKGHIRD 296
Score = 40 (19.1 bits), Expect = 8.9e-08, Sum P(3) = 8.9e-08
Identities = 22/99 (22%), Positives = 42/99 (42%)
Query: 254 QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL-GFWTYGLGFSDTII 312
++L + + + G TG+V F + Y +IN+ + + G ++Y + I+
Sbjct: 332 KRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIRDHQKQHIVGKFSYDSLKAKMIM 391
Query: 313 DPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPLRI 351
+ N S Q+ W G P+G +P + L I
Sbjct: 392 --RINDS------QIIWGGKQRRKPEGIMIPTHLKVLTI 422
>UNIPROTKB|L7MTP7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA]
GeneTree:ENSGT00700000104113 EMBL:AAEX03006734
Ensembl:ENSCAFT00000031003 Uniprot:L7MTP7
Length = 942
Score = 111 (44.1 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 533 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 590
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 591 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 650
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 651 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 687
Score = 76 (31.8 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 340 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 393
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 394 PNDR--------KIIWPGGETEKPRGYQMSTR 417
Score = 69 (29.3 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 741 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 799
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 800 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 853
Score = 60 (26.2 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 235 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 288
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 289 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 338
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 339 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 387
>UNIPROTKB|Q5R1P0 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 InterPro:IPR018882
Pfam:PF10562 EMBL:AB195993 EMBL:AB195994 EMBL:AB195995
RefSeq:NP_001008717.1 UniGene:Cfa.16224 ProteinModelPortal:Q5R1P0
SMR:Q5R1P0 STRING:Q5R1P0 PRIDE:Q5R1P0 GeneID:494007 KEGG:cfa:494007
CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638 OrthoDB:EOG4CG07J
NextBio:20865536 Uniprot:Q5R1P0
Length = 943
Score = 111 (44.1 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 534 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 591
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 592 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 651
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 652 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 688
Score = 76 (31.8 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 341 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 394
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 395 PNDR--------KIIWPGGETEKPRGYQMSTR 418
Score = 69 (29.3 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 742 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 800
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 801 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 854
Score = 60 (26.2 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 236 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 289
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 290 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 339
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 340 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 388
>UNIPROTKB|F6Y5R7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
OMA:VYRSAAM Ensembl:ENSCAFT00000035191 EMBL:AAEX03006734
Uniprot:F6Y5R7
Length = 949
Score = 111 (44.1 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 540 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 597
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 598 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 657
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 658 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 694
Score = 76 (31.8 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 347 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 400
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 401 PNDR--------KIIWPGGETEKPRGYQMSTR 424
Score = 69 (29.3 bits), Expect = 9.8e-08, Sum P(3) = 9.8e-08
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 748 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 806
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 807 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 860
Score = 60 (26.2 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 242 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 295
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 296 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 345
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 346 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 394
>UNIPROTKB|E2R3A6 [details] [associations]
symbol:E2R3A6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882
Pfam:PF10562 ProteinModelPortal:E2R3A6 Ensembl:ENSCAFT00000035191
Uniprot:E2R3A6
Length = 957
Score = 111 (44.1 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 532 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 589
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 590 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 649
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 650 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 686
Score = 76 (31.8 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 341 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 394
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 395 PNDR--------KIIWPGGETEKPRGYQMSTR 418
Score = 69 (29.3 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 740 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 798
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 799 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 852
Score = 60 (26.2 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 236 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 289
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 290 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 339
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 340 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 388
>UNIPROTKB|F1SQ84 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTNRSHL EMBL:CU463198
EMBL:CU694276 Ensembl:ENSSSCT00000000660 Uniprot:F1SQ84
Length = 1351
Score = 125 (49.1 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 46/196 (23%), Positives = 85/196 (43%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ + VG + I
Sbjct: 326 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEE 385
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 386 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFE 445
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 446 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 505
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 506 AVIFLASYTANLAAFM 521
Score = 68 (29.0 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 35/127 (27%), Positives = 62/127 (48%)
Query: 585 LKSRKTGAVFLEVAEAKI--FLA---KYCKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVI 638
L S KTG + + +A + ++A + CK T+ +G + G G A K S V
Sbjct: 585 LLSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVD 644
Query: 639 EALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGIST 694
A+L++ G++ ELE T + +EK EV + DI +++ G +F + G
Sbjct: 645 LAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYMLGAAMA 697
Query: 695 IALVIFL 701
++L+ F+
Sbjct: 698 LSLITFI 704
Score = 67 (28.6 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 63 QMKAIAAIVQSWEWHQ---VTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHF-- 117
Q + I++ ++W+ VT + I + ++ G E+ VL L
Sbjct: 20 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIENSF--VGWELEEVLLLDMSLD 77
Query: 118 -PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
S++ +L+KL Q + +++ + E A ++FE AN + + Y WI
Sbjct: 78 DGDSKIQNQLKKL---QSPIILLYCTKEEATYIFEVANSVGLTGYGYTWI 124
>UNIPROTKB|F1NMB0 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0043408 "regulation of MAPK cascade"
evidence=ISS] [GO:0008021 "synaptic vesicle" evidence=ISS]
[GO:0014049 "positive regulation of glutamate secretion"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0045471 GO:GO:0007613
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0042734 GO:GO:0014049 GO:GO:0030288
GO:GO:0046982 InterPro:IPR001828 GO:GO:0017146 GO:GO:0043408
GO:GO:0005234 GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTNRSHL
EMBL:AADN02006024 EMBL:AADN02006025 EMBL:AADN02006026
EMBL:AADN02006027 IPI:IPI00599161 ProteinModelPortal:F1NMB0
Ensembl:ENSGALT00000019272 Uniprot:F1NMB0
Length = 1370
Score = 122 (48.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K + + + F YL N NG+++ ++ ++ VG + I
Sbjct: 323 GFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEE 382
Query: 431 RCQYADFTHPYTESGLVMIFPVQKSGNKTLLFLKPFTRAVWILVAV-ISIYNGFVVWLIE 489
R + DF+ P+ E+G+ ++ FL+PF+ VW+++ V + I + V++ E
Sbjct: 383 RSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFE 442
Query: 490 R------NHW---PELTGSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWLFV 534
N G G WL FN + + S++ VW F
Sbjct: 443 YFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFF 502
Query: 535 ALVISQTYTANLTSML 550
A++ +YTANL + +
Sbjct: 503 AVIFLASYTANLAAFM 518
Score = 70 (29.7 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 26/113 (23%), Positives = 51/113 (45%)
Query: 63 QMKAIAAIVQSWEWHQVTVI------YEDIDSSATGILPHLSDALREAGAEIIHVLALPH 116
Q + I++ ++W+ +++ Y+D + + H G E+ VL L
Sbjct: 15 QASVMLNIMEEYDWYIFSIVTTYFPGYQDFVNKIRSTIEHSF-----VGWELEEVLLLDM 69
Query: 117 F---PSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWI 166
S++ +L+KL Q V +++ + E A ++FE AN + + Y WI
Sbjct: 70 SLDDGDSKIQNQLKKL---QSPVILLYCTKEEATYIFEVANSVGLTGYGYTWI 119
Score = 68 (29.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 35/133 (26%), Positives = 59/133 (44%)
Query: 576 RCLGDYASDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSP 632
R + D LK+ K A + A + CK T+ +G + G G A K S
Sbjct: 576 RGVDDALFSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSG 635
Query: 633 LLPSVIEALLKVSESGKLRELE----TSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVL 688
V A+L++ G++ ELE T + +EK EV + DI +++ G +F +
Sbjct: 636 WKRQVDLAILQLFGDGEMEELEALWLTGICHNEK-NEV-MSSQLDIDNMA--G---VFYM 688
Query: 689 SGGISTIALVIFL 701
G ++L+ F+
Sbjct: 689 LGAAMALSLITFI 701
>UNIPROTKB|F1RGG3 [details] [associations]
symbol:LOC100737141 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:FP015926 EMBL:FP102936 Ensembl:ENSSSCT00000003376 OMA:THIRICQ
Uniprot:F1RGG3
Length = 558
Score = 99 (39.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFI-------PF-NGSYDDLVKQLYLNNFAGV-VGDVA 426
F GF +++ + L E L F + P NGS+ +V +L A + V
Sbjct: 20 FEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFT 79
Query: 427 IVARRCQYADFTHPYTESGLVMIFPVQKSGNKT--LLFLKPFTRAVWILVAVISIYNGFV 484
I A R + DF+ P+ G+ +++ V G K FL PF+ AVW+ + + + V
Sbjct: 80 ITAEREKVIDFSKPFMTLGISILYRVHM-GRKPGYFSFLDPFSPAVWLFMLLAYLAVSCV 138
Query: 485 VWLIER 490
++L R
Sbjct: 139 LFLAAR 144
Score = 77 (32.2 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 612 TVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDD 671
T G G G P GSP + A+L++ E+ +L L+ +C + H
Sbjct: 315 TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKEEDHRA 374
Query: 672 DDISSLSPSGFWVLFVLSGGIST-IALVIFLW 702
+ + G +V+ + I+ +A++ F+W
Sbjct: 375 KGLGMENIGGIFVVLICGLIIAVFVAVMEFIW 406
Score = 71 (30.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + +E V + + L I
Sbjct: 195 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNI 242
>WB|WBGene00001619 [details] [associations]
symbol:glr-8 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 SMART:SM00918
GO:GO:0016020 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 EMBL:FO080548 PIR:T34233 RefSeq:NP_509097.1
ProteinModelPortal:Q19693 SMR:Q19693 EnsemblMetazoa:F22A3.3
GeneID:180924 KEGG:cel:CELE_F22A3.3 UCSC:F22A3.3 CTD:180924
WormBase:F22A3.3 eggNOG:NOG289475 GeneTree:ENSGT00530000066932
HOGENOM:HOG000017670 InParanoid:Q19693 OMA:TRTEMIA NextBio:911574
ArrayExpress:Q19693 Uniprot:Q19693
Length = 489
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 62/238 (26%), Positives = 111/238 (46%)
Query: 345 KDQPLRIGVP-IGSEFQQYVNVEYDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFN 403
K + L++ VP I + YVN + + Y G +E+ K + ++L L Y +P
Sbjct: 2 KGRTLKMVVPAIEPPYVNYVNFSDAAVTDKGYGPGVVMEILKEIGKRLN--LTYEILPAL 59
Query: 404 GS-YDDLVKQLYLNNFAGVV-GDVAIVAR-------RCQYADFTHPYT-ESGLVMIFPVQ 453
GS + + + + F +V G+V ++A R AD T+P+ E +MI +
Sbjct: 60 GSTWGEYLNGSWTGAFGQLVRGEVDLLAGGAIMEYDRSVIADLTYPFQFEPTGIMIRSPE 119
Query: 454 KSGNKTLLFL-KPFTRAVWILVAVISIYNG--FVVWL-IERNHWPELTGSALHQTGTFFW 509
K + TLL + +PF+ VW++ A + + +G F+V I R + E+T + FF
Sbjct: 120 KYEDDTLLIVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVYEEMTVTPFESIWVFFS 179
Query: 510 LSFNLHG--EKLHSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
+ F G E+ S R+ +W ++ +S T+T +L ++ NI+ L
Sbjct: 180 I-FVQQGLPEQPRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPFQNIDQL 236
>UNIPROTKB|F1P0L4 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001640
"adenylate cyclase inhibiting G-protein coupled glutamate receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:AADN02043882 EMBL:AADN02043883
IPI:IPI00577160 ProteinModelPortal:F1P0L4
Ensembl:ENSGALT00000003274 Uniprot:F1P0L4
Length = 891
Score = 93 (37.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 66/326 (20%), Positives = 128/326 (39%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 78 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 136
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFP--SSRLSEEL 126
+VQ +W TV+Y+D +TG++ L + + I L + P + L
Sbjct: 137 DLVQYLKWRSATVVYDD----STGLI-RLQELIMAPSRYNIR-LKIRQLPLDTDDARPLL 190
Query: 127 EKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSIS 184
+++K G+ + S +A + +A M MM + Y I+ T D + + S ++
Sbjct: 191 KEMKRGREFRIIFDCSHLMAAQILRQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVN 250
Query: 185 SMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL---AVQTYDAVWSV 241
+ G R E+ P +++ P+ + G + A YDAV V
Sbjct: 251 ----LTGFRILNVEN-PHVSSIIEKWAMERLQSAPKAELGLLDGVMMTDAALLYDAVHVV 305
Query: 242 ALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQK-VAPAHTYQ 286
++ ++ K+ + + + I + ++GLTG++ F +
Sbjct: 306 SVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKSSGLRTDFDLD 365
Query: 287 IINLMGKSYRELGFWTYGLGFSDTII 312
II+L ++G W G + T I
Sbjct: 366 IISLKEDGLEKVGTWNPSNGLNITEI 391
Score = 86 (35.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 33/126 (26%), Positives = 55/126 (43%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TFF---WL 510
FL P + +W+ + + + V+++I R W P GS + + T F W
Sbjct: 529 FLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDIVENNFTLFNSFWF 588
Query: 511 SFNL---HGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 589 GMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 648
Query: 566 QSSNAI 571
I
Sbjct: 649 AKQTKI 654
Score = 78 (32.5 bits), Expect = 9.7e-07, Sum P(3) = 9.7e-07
Identities = 28/124 (22%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD ++K+L + V + I
Sbjct: 434 FEGYCIDLLKELAVILGFTYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTI 493
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ + + + V++
Sbjct: 494 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLF 553
Query: 487 LIER 490
+I R
Sbjct: 554 VIAR 557
Score = 75 (31.5 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L++ E KL
Sbjct: 707 ALLMESTTIEYITQRNCN-LTQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDKLH 765
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLF-VLSGGIST---IALVIFLWR 703
++ C E ++ + S+L +F VL+ G+ +A+V F+++
Sbjct: 766 VMKEKWWRGNGCPE---DENKEASALGIQNIGGIFIVLAAGLVLSVFVAMVEFIYK 818
>UNIPROTKB|F1MCW8 [details] [associations]
symbol:F1MCW8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0042734
GO:GO:0030288 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 GO:GO:0032983 EMBL:DAAA02040526
EMBL:DAAA02040527 IPI:IPI00842735 Ensembl:ENSBTAT00000022788
OMA:FATICRI Uniprot:F1MCW8
Length = 751
Score = 77 (32.2 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 524 SRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R + VW L+I +YTANL + LT + ++ + +++ L AI
Sbjct: 531 TRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAI 578
Score = 76 (31.8 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 422 VGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIY 480
V + I A R + DF+ P+ G+ +++ V FL PF+ VW+ + + +
Sbjct: 411 VAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLA 470
Query: 481 NGFVVWLIER 490
V++L+ R
Sbjct: 471 VSCVLFLVAR 480
Score = 71 (30.1 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 28/113 (24%), Positives = 45/113 (39%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A LE + + + C T G G G P GS A+L++ E+ +L
Sbjct: 632 AFLLESTMNEYYRQRNCN-LTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLE 690
Query: 652 ELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTI--ALVIFLW 702
L+ KC + H + + G +V+ + G I I A++ FLW
Sbjct: 691 ILKRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLIC-GLIVAIFMAMLEFLW 742
Score = 69 (29.3 bits), Expect = 1.6e-07, Sum P(4) = 1.6e-07
Identities = 36/172 (20%), Positives = 79/172 (45%)
Query: 9 VEAILGPQTSEETSSV-AEIASKKQIPVLSFA-DATPNWATERWPFL-LQASQNQLAQMK 65
V A+LGP +S +SS+ + I +K++P A + + +R+ L L S ++
Sbjct: 9 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFIKFQFQRFTTLNLHPSNTDISV-- 66
Query: 66 AIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALRE--AGAEIIHVLALPHFPSSRLS 123
A+A ++ + +I + A +L +L LR+ + + V L +
Sbjct: 67 AVAGVLNFFNCTTACLIC----AKAECLL-NLEKLLRQFLISKDTLSVRMLDDARDP--T 119
Query: 124 EELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLV 175
L++++ + ++H + ++ + KA ++ M+ Y +I T+ SL+
Sbjct: 120 PLLKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLTVSLI 171
>UNIPROTKB|G3N3K3 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060179 "male mating behavior" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043278 "response to morphine" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021586
"pons maturation" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0018964 "propylene metabolic process"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0008542 "visual
learning" evidence=IEA] [GO:0008355 "olfactory learning"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0007616 "long-term
memory" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0021987 GO:GO:0008355 GO:GO:0014069 GO:GO:0009986
GO:GO:0043278 GO:GO:0019233 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0008344
GO:GO:0001967 GO:GO:0008542 GO:GO:0007616 GO:GO:0005509
GO:GO:0060079 GO:GO:0001975 GO:GO:0043524 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043065 GO:GO:0050770
GO:GO:0048814 GO:GO:0007585 GO:GO:0006874 GO:GO:0001661
GO:GO:0051963 GO:GO:0035176 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0060179 GO:GO:0004972
InterPro:IPR018882 Pfam:PF10562 OMA:VYRSAAM GO:GO:0021586
EMBL:DAAA02032413 EMBL:DAAA02032414 EMBL:DAAA02032415
Ensembl:ENSBTAT00000065439 Uniprot:G3N3K3
Length = 931
Score = 108 (43.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWIL--VAV 476
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+L +
Sbjct: 534 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLRPLRP 591
Query: 477 ISIYNGFVVWLIERNHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-RMTTLVWLF 533
S + F V E LT L F W + N GE + S R+ +VW
Sbjct: 592 RSPFGRFKV-NSEEEEEDALT---LSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAG 647
Query: 534 VALVISQTYTANLTSMLTARGLEPTVNNI 562
A++I +YTANL + L E + I
Sbjct: 648 FAMIIVASYTANLAAFLVLDRPEERITGI 676
Score = 76 (31.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 256 LLRRILLSD--FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DG+TG+VEF Y I+NL + ++G ++ T +
Sbjct: 341 LFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGI------YNGTHVI 394
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
P ++ WPG P+G+ + +
Sbjct: 395 PNDR--------KIIWPGGETEKPRGYQMSTR 418
Score = 69 (29.3 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V ++LK
Sbjct: 730 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLSILKS 788
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 789 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 842
Score = 60 (26.2 bits), Expect = 7.5e-06, Sum P(3) = 7.5e-06
Identities = 34/171 (19%), Positives = 72/171 (42%)
Query: 133 QCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTSSIS-SMQGILG 191
+ RV ++ S + A ++ A + M Y+W+ + I+ +++ + GI+G
Sbjct: 236 EARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE------REISGNALRYAPDGIIG 289
Query: 192 VRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQKSE 250
++ + + D + E E++N +P V + +W K+
Sbjct: 290 LQLINGKNESAHISDAVGVVAQAVH-ELLEKENITDPPRGCVGNTN-IW--------KTG 339
Query: 251 KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
L +++L +D G+TG+VEF Y I+NL + ++G +
Sbjct: 340 PLFKRVLMSSKYAD--GVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIY 388
>MGI|MGI:95812 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95812 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:CH466573 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 CTD:2894 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 KO:K05206 OMA:LLPWICQ
EMBL:D10171 EMBL:AK138279 EMBL:CT009532 EMBL:AC114572 EMBL:AC154388
EMBL:AC154730 EMBL:AC163280 EMBL:AC169510 EMBL:CT030647
IPI:IPI00123542 PIR:JH0266 RefSeq:NP_032192.2 UniGene:Mm.121569
UniGene:Mm.413604 ProteinModelPortal:Q61627 SMR:Q61627
MINT:MINT-1791814 STRING:Q61627 PhosphoSite:Q61627 PaxDb:Q61627
PRIDE:Q61627 DNASU:14803 Ensembl:ENSMUST00000043349 GeneID:14803
KEGG:mmu:14803 InParanoid:Q3UUL5 OrthoDB:EOG4ZCT3V ChiTaRS:GRID1
NextBio:286969 Bgee:Q61627 CleanEx:MM_GRID1 Genevestigator:Q61627
Uniprot:Q61627
Length = 1009
Score = 142 (55.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 115/536 (21%), Positives = 214/536 (39%)
Query: 70 IVQSWEWHQVTVIYEDIDSSATGILPHLSDA--------LREAGAEIIHVLALPHFPSSR 121
+V W + + Y D + G+ L A L++ I HV F + +
Sbjct: 156 LVTELRWQKFVMFY-DSEYDIRGLQSFLDQASRLGLDVSLQKVDKNISHVFT-SLFTTMK 213
Query: 122 LSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSINTS 181
+EEL + + R ++ LS + A +A + + KD W+ + S ++
Sbjct: 214 -TEELNRYRDTLRRAILL-LSPQGAHSFINEAVETNLASKDSHWVFVNEEISDPEILDLV 271
Query: 182 SISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEY--PEEDNNHEPGALAVQTYDAVW 239
S++ + VR FP K + C R R + P+E + YD+V
Sbjct: 272 H-SALGRMTVVRQIFPSAKDNQK--CMRNNHRISSLLCDPQEGYLQMLQISNLYLYDSVL 328
Query: 240 SVALAMEQKSE--KLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRE 297
+A A +K E K + + G ++ + H + +M +RE
Sbjct: 329 MLANAFHRKLEDRKWHSMASLNCIRKSTKPWNGGRSMLDT-IKKGHITGLTGVM--EFRE 385
Query: 298 LGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAKDQPL--RI-GVP 354
Y + F I+ Y+ + KD+ ++ A W + KG +++P+ R+ G+
Sbjct: 386 DSSNPY-VQFE--ILGTTYSETFGKDMRKL----ATWDSEKGLNGSLQERPMGSRLQGLT 438
Query: 355 IG--SEFQQ-YVNVEYDELRNFTYFGGFSIELFKALVEKLPF-Y----LP---YNFIPFN 403
+ + ++ +V V + L + GFSI++ AL + L F Y P Y N
Sbjct: 439 LKVVTVLEEPFVMVAENILGQPKRYKGFSIDVLDALAKALGFKYEIYQAPDGRYGHQLHN 498
Query: 404 GSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLF- 462
S++ ++ +L + + I R DF+ Y + + ++ ++K K +F
Sbjct: 499 TSWNGMIGELISKRADLAISAITITPERESVVDFSKRYMDYSVGIL--IKKPEEKISIFS 556
Query: 463 -LKPFTRAVWILVAVISIYNGFVVWLIERNH--------WPELTGSA-LHQTGTFFWLSF 512
PF AVW +A G +++++ R P + SA LH + +F
Sbjct: 557 LFAPFDFAVWACIAAAIPVVGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAF 616
Query: 513 NLHGEKLHSNLSRMTTLV---WLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
G + N M ++ WLF L++ +YTANL + LT ++ + + L
Sbjct: 617 VQQGGESSVNSVAMRIVMGSWWLFT-LIVCSSYTANLAAFLTVSRMDNPIRTFQDL 671
Score = 63 (27.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 36/146 (24%), Positives = 57/146 (39%)
Query: 573 GYSRCLGDYASDLKSRKTGA-VFL-EVA--EAKIFLAKYCKGFTVAGPTYKVGGLGFAFP 628
G C+ + + ++ K G FL +VA E C TV G + G G A
Sbjct: 717 GADNCVSNPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCS-VTVIGNSISSKGYGIALQ 775
Query: 629 KGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDIS--SLSPSGFWVLF 686
GSP + +L++ ++G L L+ ++ H SL F +F
Sbjct: 776 HGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLTSHSSTQTEGKSLKLHSFAGVF 835
Query: 687 -VLSGGISTIALV--IFLWRCNWKIN 709
+L+ G+ LV + LW W N
Sbjct: 836 CILAIGLLLACLVAALELW---WNSN 858
>UNIPROTKB|F1P6E5 [details] [associations]
symbol:GABBR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002456 InterPro:IPR017978 Pfam:PF00003 PRINTS:PR00248
PRINTS:PR01176 PRINTS:PR01177 PROSITE:PS50259 Pfam:PF01094
GO:GO:0016021 InterPro:IPR001828 InterPro:IPR000436 Pfam:PF00084
SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923 OMA:SEPPDRL
GO:GO:0004965 GeneTree:ENSGT00530000063129 EMBL:AAEX03017622
EMBL:AAEX03017623 Ensembl:ENSCAFT00000019339 Uniprot:F1P6E5
Length = 929
Score = 154 (59.3 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 66/282 (23%), Positives = 123/282 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 199 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 258
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 259 TLHNPTRVKLFEKWGWRKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 317
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWI-----TTDAFTSL 174
++ LK R+ +V L E A +F + K ++ K Y+W + F +
Sbjct: 318 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKTY 372
Query: 175 VHSINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 373 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 431
Query: 225 HEPGALAVQTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFD 266
+ LA YDA+W++ALA+ + S + +R L DF+
Sbjct: 432 FQEAPLA---YDAIWALALALNKTSGGSGRSGVR---LEDFN 467
>UNIPROTKB|F1SSF1 [details] [associations]
symbol:F1SSF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002457 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01178
Pfam:PF01094 GO:GO:0016021 InterPro:IPR001828 GO:GO:0004965
GeneTree:ENSGT00530000063129 EMBL:CU302414 EMBL:CU466963
EMBL:CU633570 Ensembl:ENSSSCT00000005917 OMA:NDASINC Uniprot:F1SSF1
Length = 467
Score = 149 (57.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 66/306 (21%), Positives = 126/306 (41%)
Query: 12 ILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATER-WPFLLQASQNQLAQMKAIAAI 70
+ G TS +AE + LSFA TP A ++ +P+ + + A AI +
Sbjct: 130 VFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKL 189
Query: 71 VQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEKLK 130
++ ++W +V + +D+ + + L+ L EI + + P + ++KLK
Sbjct: 190 LKHYQWKRVGTLTQDVQRFSE-VRNDLTGVLYGEDIEISDTESFSNDPCT----SVKKLK 244
Query: 131 GGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD----AFTSLVHSINTSS---- 182
G R+ + +A +F A + M Y WI ++ VH+ SS
Sbjct: 245 GNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGWYEPSWWEQVHTEANSSRCLR 304
Query: 183 ---ISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
+++M+G +GV P + + + +++ EY + + P YD +W
Sbjct: 305 KNLLAAMEGYIGVDFE-PLSSKQIKTISGKTPQQYEREYNNKRSGVGPSKFHGYAYDGIW 363
Query: 240 SVALAMEQKSEKLNQKLLRRILLSDF---DGLTGKV--EFMNQKVAPAHTYQIINLMGKS 294
+A +++ E L+ R + DF D GK+ MN+ T Q++ G+
Sbjct: 364 VIAKTLQRAMETLHASS-RHQRIQDFNYTDHTLGKIILNAMNETNFFGVTGQVVFRNGER 422
Query: 295 YRELGF 300
+ F
Sbjct: 423 MGTIKF 428
>UNIPROTKB|F1RYH7 [details] [associations]
symbol:LOC100738146 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR002455 InterPro:IPR002456 PRINTS:PR01176
PRINTS:PR01177 Pfam:PF01094 GO:GO:0016021 GO:GO:0005737
GO:GO:0045211 GO:GO:0007214 GO:GO:0042734 InterPro:IPR001828
InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535
PROSITE:PS50923 CTD:2550 KO:K04615 GO:GO:0038037 GO:GO:0004965
GeneTree:ENSGT00530000063129 EMBL:CT737425 EMBL:AB158486
RefSeq:NP_001116586.1 UniGene:Ssc.48565 Ensembl:ENSSSCT00000001355
GeneID:100141417 KEGG:ssc:100141417 OMA:AINDTEC Uniprot:F1RYH7
Length = 577
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 230 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 289
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 290 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 348
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 349 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 403
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 404 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 462
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 463 FQEAPLA---YDAIWALALALNKTS 484
>UNIPROTKB|C9JBK4 [details] [associations]
symbol:GABBR1 "Gamma-aminobutyric acid type B receptor
subunit 1" species:9606 "Homo sapiens" [GO:0004965 "G-protein
coupled GABA receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
PRINTS:PR01176 PRINTS:PR01177 Pfam:PF01094 GO:GO:0016021
InterPro:IPR001828 InterPro:IPR000436 Pfam:PF00084 SMART:SM00032
SUPFAM:SSF57535 PROSITE:PS50923 EMBL:CR388210 HGNC:HGNC:4070
ChiTaRS:GABBR1 GO:GO:0004965 EMBL:BX927223 IPI:IPI01022568
ProteinModelPortal:C9JBK4 SMR:C9JBK4 Ensembl:ENST00000550820
UCSC:uc011goz.1 ArrayExpress:C9JBK4 Uniprot:C9JBK4
Length = 578
Score = 150 (57.9 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 231 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 290
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 291 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 349
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 350 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 404
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 405 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 463
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 464 FQEAPLA---YDAIWALALALNKTS 485
>ZFIN|ZDB-GENE-020125-7 [details] [associations]
symbol:gria4a "glutamate receptor, ionotropic, AMPA
4a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-7 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525747
IPI:IPI01016706 RefSeq:NP_999971.1 UniGene:Dr.89716
ProteinModelPortal:Q71E59 SMR:Q71E59 GeneID:407735 KEGG:dre:407735
CTD:407735 NextBio:20818588 Uniprot:Q71E59
Length = 898
Score = 117 (46.2 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 100/506 (19%), Positives = 195/506 (38%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATE-RWPFLLQASQNQLAQM 64
S+ V AI G ++ S I ++ TP++ E F+LQ +
Sbjct: 83 SRGVFAIFGLYDKRSVHTLTSFCSALHISLV-----TPSFPAEGETQFVLQLRPSIRG-- 135
Query: 65 KAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSE 124
A+ +++ ++W + +Y D D +L + + + G ++ + + +F +
Sbjct: 136 -ALLSLLDHYDWSRFVFLY-DTDRGYA-VLQAIMEKAGQNGWQV-SAICVENFNDASYRR 191
Query: 125 ELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD-AFTSLVHSINTSSI 183
LE L Q + FV+ L E ++ E+ + K Y +I + F +
Sbjct: 192 LLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKGYHYIVANLGFKDISLERFMHGG 251
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVWSVAL 243
+++ G V F KP +R+ K EYP ++ P + TYD V +A
Sbjct: 252 ANVTGFQLV--DF--SKPMVIKLMQRWNKLDQREYPGSES--PPRYTSSLTYDGVLVMAE 305
Query: 244 AMEQ-KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWT 302
A + +K++ + RR D L NQ + T + + + G + + F
Sbjct: 306 AFRNLRRQKID--ISRRGNAGDC--LANPAAPWNQGIDMERTLKQVRIQGLT-GNIQFDH 360
Query: 303 YG--LGFSDTIIDPKYNCSSMKDLGQVFWPGAPWYTPKGWTLP-AKDQPLRIGVPIGSEF 359
YG + ++ + + K N + +G +W L D + I +
Sbjct: 361 YGRRVNYTMDVFELKSN--GPRKIG--YWNDLDKLVLVQNELSMGNDSAMENRTVIVTTI 416
Query: 360 QQ--YVNVE--YDELRNFTYFGGFSIELFKALVEKLPFYLPYNFIPFNGSY--------- 406
+ YV ++ ++ F G+ ++L + + + + + +G Y
Sbjct: 417 MEGPYVMLKKNWEMYEGNEQFEGYCVDLASEVAKHIGIKYKISIV-LDGKYGARDPETKI 475
Query: 407 -DDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLFLK 464
+ +V +L V +AI R + DF+ P+ G+ +MI QKS FL
Sbjct: 476 WNGMVGELVYGKAEIAVAPLAITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLD 535
Query: 465 PFTRAVWILVAVISIYNGFVVWLIER 490
P +W+ + I V++L+ R
Sbjct: 536 PLAYEIWMCIVFAYIGVSVVLFLVSR 561
Score = 86 (35.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 46/155 (29%), Positives = 66/155 (42%)
Query: 553 RGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRKTGAVFLEVAEAKIFLAKYCKGFT 612
+ EPTV T ++ + + G YA L+S E E + K C
Sbjct: 692 KSAEPTVF---TKTTAEGVARVRKSKGKYAFLLESTMN-----EYTEQR----KPCDTMK 739
Query: 613 VAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASE-KCMEVNLHDD 671
V G G G A PKGS L V A+LK+SE+G L +L+ + +C +
Sbjct: 740 VGG-NLDSKGYGVATPKGSQLGTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSK 798
Query: 672 DDIS-SLSPSGF-WVLFVLSGGISTIALVIFLWRC 704
D S +LS S V ++L GG+ LV + C
Sbjct: 799 DKSSQALSLSNVAGVFYILVGGLGLAMLVALVEFC 833
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
VW F L+I +YTANL + LT + + + E L I
Sbjct: 621 VWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 662
>UNIPROTKB|O15399 [details] [associations]
symbol:GRIN2D "Glutamate receptor ionotropic, NMDA 2D"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0051930 "regulation of
sensory perception of pain" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005886 GO:GO:0007268 GO:GO:0051930 GO:GO:0030054
GO:GO:0045211 GO:GO:0008344 GO:GO:0035235 GO:GO:0035249
DrugBank:DB00142 GO:GO:0030288 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0001964 DrugBank:DB01173 GO:GO:0016595 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0022843
EMBL:AC008403 GO:GO:0004972 OrthoDB:EOG42RD6M EMBL:U77783
EMBL:AC011527 IPI:IPI00006217 RefSeq:NP_000827.2 UniGene:Hs.445015
ProteinModelPortal:O15399 SMR:O15399 IntAct:O15399 MINT:MINT-130143
STRING:O15399 PhosphoSite:O15399 PaxDb:O15399 PRIDE:O15399
Ensembl:ENST00000263269 GeneID:2906 KEGG:hsa:2906 UCSC:uc002pjc.4
CTD:2906 GeneCards:GC19P048898 H-InvDB:HIX0040164 HGNC:HGNC:4588
HPA:HPA038269 MIM:602717 neXtProt:NX_O15399 PharmGKB:PA28982
HOGENOM:HOG000113803 HOVERGEN:HBG052637 InParanoid:O15399 KO:K05212
OMA:ARCGCPR PhylomeDB:O15399 BindingDB:O15399 ChEMBL:CHEMBL2591
GenomeRNAi:2906 NextBio:11507 Bgee:O15399 CleanEx:HS_GRIN2D
Genevestigator:O15399 GermOnline:ENSG00000105464 Uniprot:O15399
Length = 1336
Score = 137 (53.3 bits), Expect = 6.2e-07, Sum P(4) = 6.2e-07
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N +G ++ ++ +++ +G + I
Sbjct: 486 GFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEE 545
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 546 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 603
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E + L G + G WL FN + E S++ LVW
Sbjct: 604 FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA 663
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 664 FFAVIFLASYTANLAAFMIQEEYVDTVSGL 693
Score = 72 (30.4 bits), Expect = 6.2e-07, Sum P(4) = 6.2e-07
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 583 SDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVIE 639
+ LK+ K A + A K CK T+ +G + G G A KGS +
Sbjct: 746 TQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDL 805
Query: 640 ALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ ++ LE S I +EV + DI +++ F++L V G ++
Sbjct: 806 ALLQFLGDDEIEMLERLWLSGICHNDKIEV-MSSKLDIDNMA-GVFYMLLVAMG----LS 859
Query: 697 LVIFLWR--CNWKINENL 712
L++F W W++ L
Sbjct: 860 LLVFAWEHLVYWRLRHCL 877
Score = 46 (21.3 bits), Expect = 6.2e-07, Sum P(4) = 6.2e-07
Identities = 36/176 (20%), Positives = 71/176 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWAT--ERWPFLLQ 55
DL+ +V ++ S +VA I +++ +P+++ T E+ LQ
Sbjct: 105 DLLSGLRVHGVVFEDDSR-APAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQ 163
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLS--DALREA---GAEIIH 110
+ Q++ I +++ ++W + + A G LS + L + G E
Sbjct: 164 LGSSTEQQLQVIFEVLEEYDWTSFVAV----TTRAPGHRAFLSYIEVLTDGSLVGWEHRG 219
Query: 111 VLAL-PHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW 165
L L P + LS +L + Q R+ + + E A +F A + + Y+W
Sbjct: 220 ALTLDPGAGEAVLSAQLRSVSA-QIRL--LFCAREEAEPVFRAAEEAGLTGSGYVW 272
Score = 39 (18.8 bits), Expect = 6.2e-07, Sum P(4) = 6.2e-07
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 227 PGALAVQ-TYDAVWSVALAMEQKSEKLNQKLLRR 259
P + + T D W V + EQ++ +L L R
Sbjct: 385 PSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSR 418
>MGI|MGI:1860139 [details] [associations]
symbol:Gabbr1 "gamma-aminobutyric acid (GABA) B receptor, 1"
species:10090 "Mus musculus" [GO:0001649 "osteoblast
differentiation" evidence=ISO] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0004930 "G-protein coupled receptor
activity" evidence=IEA] [GO:0004965 "G-protein coupled GABA
receptor activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISO] [GO:0007194 "negative regulation of adenylate cyclase
activity" evidence=ISO] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IDA] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0014048 "regulation of glutamate
secretion" evidence=ISO] [GO:0014049 "positive regulation of
glutamate secretion" evidence=ISO] [GO:0014053 "negative regulation
of gamma-aminobutyric acid secretion" evidence=ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030673
"axolemma" evidence=ISO] [GO:0030817 "regulation of cAMP
biosynthetic process" evidence=ISO] [GO:0031966 "mitochondrial
membrane" evidence=ISO] [GO:0032811 "negative regulation of
epinephrine secretion" evidence=ISO] [GO:0033602 "negative
regulation of dopamine secretion" evidence=ISO] [GO:0038037
"G-protein coupled receptor dimeric complex" evidence=IDA]
[GO:0042734 "presynaptic membrane" evidence=IDA] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0050805 "negative regulation of synaptic transmission"
evidence=ISO] [GO:0060124 "positive regulation of growth hormone
secretion" evidence=ISO] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259
Pfam:PF01094 MGI:MGI:1860139 GO:GO:0016021 GO:GO:0005737
GO:GO:0008285 GO:GO:0005789 GO:GO:0031966 GO:GO:0045471
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0007214 GO:GO:0014053 GO:GO:0008021 GO:GO:0043197
GO:GO:0030673 GO:GO:0042734 GO:GO:0007194 GO:GO:0045121
GO:GO:0035094 GO:GO:0032811 GO:GO:0050805 GO:GO:0001649
InterPro:IPR001828 InterPro:IPR000436 Pfam:PF00084 SMART:SM00032
SUPFAM:SSF57535 PROSITE:PS50923 GO:GO:0033602 GO:GO:0060124
CTD:2550 HOVERGEN:HBG051688 KO:K04615 OMA:SEPPDRL OrthoDB:EOG4BG8VH
ChiTaRS:GABBR1 GO:GO:0038037 GO:GO:0004965 GO:GO:0014048
EMBL:AF114168 EMBL:AF008649 EMBL:AF120255 EMBL:AL078630
EMBL:BC054735 EMBL:BC056990 IPI:IPI00223325 IPI:IPI00755301
RefSeq:NP_062312.3 UniGene:Mm.32191 ProteinModelPortal:Q9WV18
SMR:Q9WV18 IntAct:Q9WV18 STRING:Q9WV18 PhosphoSite:Q9WV18
PaxDb:Q9WV18 PRIDE:Q9WV18 Ensembl:ENSMUST00000025338
Ensembl:ENSMUST00000172792 GeneID:54393 KEGG:mmu:54393
UCSC:uc008cma.1 UCSC:uc008cmd.1 eggNOG:COG0683
GeneTree:ENSGT00530000063129 HOGENOM:HOG000016575 InParanoid:Q6PGJ2
NextBio:311240 Bgee:Q9WV18 CleanEx:MM_GABBR1 Genevestigator:Q9WV18
GermOnline:ENSMUSG00000024462 Uniprot:Q9WV18
Length = 960
Score = 152 (58.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 230 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 289
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 290 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 348
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWI-----TTDAFTSL 174
++ LK R+ +V L E A +F + K ++ K Y+W + F +
Sbjct: 349 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKTY 403
Query: 175 VHSINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 404 DPSINCTVEEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 462
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 463 FQEAPLA---YDAIWALALALNKTS 484
>UNIPROTKB|I3L7T2 [details] [associations]
symbol:LOC100623470 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0097110 "scaffold protein binding" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0034613 "cellular
protein localization" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00918 GO:GO:0034613 GO:GO:0043197
GO:GO:0035235 GO:GO:0045202 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0043523 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113
Ensembl:ENSSSCT00000031108 OMA:INDANCA Uniprot:I3L7T2
Length = 229
Score = 140 (54.3 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 58/218 (26%), Positives = 101/218 (46%)
Query: 360 QQYVNVEYDELRNFTYFGGFSIELFKALVEKLPF----YL-P---YNFIPFNGSYDDLVK 411
+ +V V + L + GFSI++ AL L F Y+ P Y +G+++ LV
Sbjct: 14 EPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVG 73
Query: 412 QLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTL-LF--LKPFTR 468
+L + + I R DFT Y + + ++ + KT+ +F L PF
Sbjct: 74 ELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLL---RRAEKTVDMFACLAPFDL 130
Query: 469 AVWILVAVISIYNGFVVWLIERNHWPEL-----TGSALHQTGTFFWLSF-NLHGEKLHSN 522
++W +A + G +V+L+ + P L T + L+ + F + SF GE ++
Sbjct: 131 SLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTT 190
Query: 523 LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTV 559
L+ RM W AL++ +YTANL + LT +E ++
Sbjct: 191 LATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSI 228
>RGD|621537 [details] [associations]
symbol:Gabbr1 "gamma-aminobutyric acid (GABA) B receptor 1"
species:10116 "Rattus norvegicus" [GO:0001649 "osteoblast
differentiation" evidence=IMP] [GO:0004965 "G-protein coupled GABA
receptor activity" evidence=IEA;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0007194
"negative regulation of adenylate cyclase activity"
evidence=IDA;IMP] [GO:0007214 "gamma-aminobutyric acid signaling
pathway" evidence=IEA;ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0014048 "regulation of glutamate
secretion" evidence=IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IMP] [GO:0014053 "negative regulation
of gamma-aminobutyric acid secretion" evidence=IMP] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030673
"axolemma" evidence=IDA] [GO:0030817 "regulation of cAMP
biosynthetic process" evidence=IDA] [GO:0031966 "mitochondrial
membrane" evidence=IDA] [GO:0032811 "negative regulation of
epinephrine secretion" evidence=IMP] [GO:0033602 "negative
regulation of dopamine secretion" evidence=IDA] [GO:0035094
"response to nicotine" evidence=IEP] [GO:0038037 "G-protein coupled
receptor dimeric complex" evidence=IEA;ISO] [GO:0042734
"presynaptic membrane" evidence=IEA;ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0050805 "negative regulation of synaptic
transmission" evidence=IDA] [GO:0060124 "positive regulation of
growth hormone secretion" evidence=IMP] InterPro:IPR002455
InterPro:IPR002456 InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176
PRINTS:PR01177 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 Pfam:PF01094 RGD:621537 GO:GO:0016021 GO:GO:0008285
GO:GO:0005789 GO:GO:0031966 GO:GO:0045471 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0007214
GO:GO:0014053 GO:GO:0008021 GO:GO:0043197 GO:GO:0030673
GO:GO:0042734 GO:GO:0007194 GO:GO:0045121 GO:GO:0035094
GO:GO:0032811 GO:GO:0050805 GO:GO:0001649 InterPro:IPR001828
InterPro:IPR000436 Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535
PROSITE:PS50923 GO:GO:0033602 GO:GO:0060124 CTD:2550
HOVERGEN:HBG051688 KO:K04615 OrthoDB:EOG4BG8VH GO:GO:0038037
GO:GO:0004965 GO:GO:0014048 eggNOG:COG0683
GeneTree:ENSGT00530000063129 HOGENOM:HOG000016575 EMBL:Y10369
EMBL:Y10370 EMBL:AB016160 EMBL:AB016161 EMBL:AF110797 EMBL:AF110796
IPI:IPI00208182 IPI:IPI00231464 IPI:IPI00231465 IPI:IPI00231466
IPI:IPI00287081 RefSeq:NP_112290.2 UniGene:Rn.30059 PDB:1SRZ
PDB:1SS2 PDBsum:1SRZ PDBsum:1SS2 DisProt:DP00463
ProteinModelPortal:Q9Z0U4 SMR:Q9Z0U4 STRING:Q9Z0U4
PhosphoSite:Q9Z0U4 PRIDE:Q9Z0U4 Ensembl:ENSRNOT00000042472
Ensembl:ENSRNOT00000051634 GeneID:81657 KEGG:rno:81657
UCSC:RGD:621537 InParanoid:Q9Z0U4 BindingDB:Q9Z0U4
ChEMBL:CHEMBL2753 EvolutionaryTrace:Q9Z0U4 NextBio:615214
ArrayExpress:Q9Z0U4 Genevestigator:Q9Z0U4
GermOnline:ENSRNOG00000000774 Uniprot:Q9Z0U4
Length = 991
Score = 152 (58.6 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 230 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 289
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 290 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 348
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWI-----TTDAFTSL 174
++ LK R+ +V L E A +F + K ++ K Y+W + F +
Sbjct: 349 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKTY 403
Query: 175 VHSINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 404 DPSINCTVEEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 462
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 463 FQEAPLA---YDAIWALALALNKTS 484
>UNIPROTKB|Q9Z0U4 [details] [associations]
symbol:Gabbr1 "Gamma-aminobutyric acid type B receptor
subunit 1" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259
Pfam:PF01094 RGD:621537 GO:GO:0016021 GO:GO:0008285 GO:GO:0005789
GO:GO:0031966 GO:GO:0045471 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0007214 GO:GO:0014053
GO:GO:0008021 GO:GO:0043197 GO:GO:0030673 GO:GO:0042734
GO:GO:0007194 GO:GO:0045121 GO:GO:0035094 GO:GO:0032811
GO:GO:0050805 GO:GO:0001649 InterPro:IPR001828 InterPro:IPR000436
Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
GO:GO:0033602 GO:GO:0060124 CTD:2550 HOVERGEN:HBG051688 KO:K04615
OrthoDB:EOG4BG8VH GO:GO:0038037 GO:GO:0004965 GO:GO:0014048
eggNOG:COG0683 GeneTree:ENSGT00530000063129 HOGENOM:HOG000016575
EMBL:Y10369 EMBL:Y10370 EMBL:AB016160 EMBL:AB016161 EMBL:AF110797
EMBL:AF110796 IPI:IPI00208182 IPI:IPI00231464 IPI:IPI00231465
IPI:IPI00231466 IPI:IPI00287081 RefSeq:NP_112290.2 UniGene:Rn.30059
PDB:1SRZ PDB:1SS2 PDBsum:1SRZ PDBsum:1SS2 DisProt:DP00463
ProteinModelPortal:Q9Z0U4 SMR:Q9Z0U4 STRING:Q9Z0U4
PhosphoSite:Q9Z0U4 PRIDE:Q9Z0U4 Ensembl:ENSRNOT00000042472
Ensembl:ENSRNOT00000051634 GeneID:81657 KEGG:rno:81657
UCSC:RGD:621537 InParanoid:Q9Z0U4 BindingDB:Q9Z0U4
ChEMBL:CHEMBL2753 EvolutionaryTrace:Q9Z0U4 NextBio:615214
ArrayExpress:Q9Z0U4 Genevestigator:Q9Z0U4
GermOnline:ENSRNOG00000000774 Uniprot:Q9Z0U4
Length = 991
Score = 152 (58.6 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 230 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 289
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 290 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 348
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWI-----TTDAFTSL 174
++ LK R+ +V L E A +F + K ++ K Y+W + F +
Sbjct: 349 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKTY 403
Query: 175 VHSINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 404 DPSINCTVEEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 462
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 463 FQEAPLA---YDAIWALALALNKTS 484
>WB|WBGene00022675 [details] [associations]
symbol:gbb-2 species:6239 "Caenorhabditis elegans"
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005507 "copper ion binding" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0004965 "G-protein
coupled GABA receptor activity" evidence=IEA] InterPro:IPR000337
InterPro:IPR002455 InterPro:IPR002456 InterPro:IPR017978
Pfam:PF00003 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021 InterPro:IPR001828
GO:GO:0004965 GeneTree:ENSGT00530000063129 EMBL:FO081645
EMBL:FO081644 EMBL:EU729335 RefSeq:NP_500579.3 UniGene:Cel.36837
ProteinModelPortal:G5ECB2 EnsemblMetazoa:ZK180.1 GeneID:191240
KEGG:cel:CELE_ZK180.1 CTD:191240 WormBase:ZK180.1 OMA:IAMALKY
Uniprot:G5ECB2
Length = 842
Score = 151 (58.2 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 75/300 (25%), Positives = 128/300 (42%)
Query: 2 DLMDSQ-KVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT----ERWPFLLQA 56
DL+ S+ + AILG Q +E +A QI LS+A+ +A+ E + +
Sbjct: 93 DLIASRPRPVAILGGQCTEVNEPIAMALKYWQIVQLSYAETHAKFASSDSHELFTTFFRV 152
Query: 57 SQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPH--LSDALREA-GAEIIHVLA 113
A V + W +V + ++ D LPH L+ L G +I+H
Sbjct: 153 VPGSRNTNMAKCKFVNHFGWKRVGTVKQN-DQPRYA-LPHEALTTRLEHGFGVKIVHTAG 210
Query: 114 LPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWIT----TD 169
+ + EL++LK R+ +V + E+A + M +Y+WI +D
Sbjct: 211 VNWEQIETVGGELDELKERDVRIILVDVDEEMAATVLCAGYHRGMYGDNYVWILPGYHSD 270
Query: 170 AFTSLVHSINTSSISSMQGILGVRSHFP-EDKPKFQDFCKRF--RKRFGAEYPE----ED 222
+ + H + ++ M+ ++HF E +D + R G + E +
Sbjct: 271 KWLNQTH--DNCTVEEMRE--AAKNHFSVEFALTRRDVDTKIVGNTRAGDVWNEITQLDP 326
Query: 223 NNHEPGALAVQTYDAVWSVALA----MEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQK 278
NN G L YD +W++A+A M +E + K++ I S F GLTGKV+F N +
Sbjct: 327 NNTWRGYL----YDGLWTLAIALSHSMGDNAEFSHHKMMEAIDNSSFQGLTGKVKFANNE 382
>ZFIN|ZDB-GENE-051202-2 [details] [associations]
symbol:grin1b "glutamate receptor, ionotropic,
N-methyl D-aspartate 1b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-2
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 KO:K05208
InterPro:IPR018882 Pfam:PF10562 HOGENOM:HOG000231491
HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:BX276128 EMBL:AL831768
IPI:IPI00616850 RefSeq:NP_001137603.1 UniGene:Dr.83363 SMR:Q6ZM67
Ensembl:ENSDART00000034849 GeneID:100005675 KEGG:dre:100005675
CTD:100005675 InParanoid:Q6ZM67 NextBio:20786787 Uniprot:Q6ZM67
Length = 937
Score = 111 (44.1 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 529 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 586
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 587 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 646
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 647 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 683
Score = 69 (29.3 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 256 LLRRILLSDF--DGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S DGLTG+VEF + Y I+N ++G + G S +++
Sbjct: 337 LFKRVLMSSKYPDGLTGRVEFNDDGDRRFAHYSILNYQKTRLVQVGVYN---G-SQVVMN 392
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
+ ++ WPG PKG+ + +
Sbjct: 393 AQR---------KIIWPGGETEKPKGYQMSTR 415
Score = 67 (28.6 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 25/117 (21%), Positives = 54/117 (46%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V A+L
Sbjct: 737 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLAILSS 795
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI +IF+
Sbjct: 796 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIVAGIFLIFI 849
Score = 66 (28.3 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 38/184 (20%), Positives = 78/184 (42%)
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
+ L+ L++ K + RV ++ S + A +++ A ++ M Y+W+ + ++
Sbjct: 219 TNLTALLQEAKELEARVIILSASEDEAAAIYKVARQLNMTGSGYVWLVGE------REMS 272
Query: 180 TSSISSM-QGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDA 237
++S G+LG++ + + D + E E++N EP V +
Sbjct: 273 GKALSEAPDGLLGLQLINGKNESAHIYDAVAVVAQSI-QELFEKENITEPPRGCVGNTN- 330
Query: 238 VWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRE 297
+W K+ L +++L D GLTG+VEF + Y I+N +
Sbjct: 331 IW--------KTGPLFKRVLMSSKYPD--GLTGRVEFNDDGDRRFAHYSILNYQKTRLVQ 380
Query: 298 LGFW 301
+G +
Sbjct: 381 VGVY 384
>UNIPROTKB|F1P6H3 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00540000070221 OMA:ARCGCPR
EMBL:AAEX03000823 Ensembl:ENSCAFT00000006426 Uniprot:F1P6H3
Length = 1126
Score = 139 (54.0 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 51/210 (24%), Positives = 96/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N +G ++ ++ +++ +G + I
Sbjct: 275 GFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEE 334
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 335 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 392
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E + L G + G WL FN + E S++ LVW
Sbjct: 393 FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA 452
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 453 FFAVIFLASYTANLAAFMIQEEYVDTVSGL 482
Score = 70 (29.7 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 583 SDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVIE 639
+ LK+ K A + A K CK T+ +G + G G A KGS +
Sbjct: 535 TQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDL 594
Query: 640 ALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ ++ LE S I +EV + DI +++ F++L V G ++
Sbjct: 595 ALLQFLGDDEIEMLERLWLSGIYHNDKIEV-MSSKLDIDNMA-GVFYMLLVAMG----LS 648
Query: 697 LVIFLWR--CNWKINENL 712
L++F W W++ L
Sbjct: 649 LLVFAWEHLVYWRLRHCL 666
Score = 39 (18.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 227 PGALAVQ-TYDAVWSVALAMEQKSEKLNQKLLRR 259
P + + T D W V + EQ++ +L L R
Sbjct: 174 PSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSR 207
>RGD|619864 [details] [associations]
symbol:Gabbr2 "gamma-aminobutyric acid (GABA) B receptor 2"
species:10116 "Rattus norvegicus" [GO:0004965 "G-protein coupled
GABA receptor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0030054 "cell junction" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA;ISO] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002457 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01178
PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259
EMBL:AF074482 Pfam:PF01094 RGD:619864 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 GO:GO:0030054 GO:GO:0045211 GO:GO:0007214
GO:GO:0043005 InterPro:IPR001828 eggNOG:NOG273984 KO:K04615
GO:GO:0004965 GeneTree:ENSGT00530000063129 CTD:9568
HOVERGEN:HBG080355 OrthoDB:EOG4PG606 HOGENOM:HOG000112688
EMBL:AJ011318 EMBL:AF058795 EMBL:AF109405 IPI:IPI00331966
RefSeq:NP_113990.1 UniGene:Rn.162814 ProteinModelPortal:O88871
MINT:MINT-1889821 STRING:O88871 PhosphoSite:O88871 PRIDE:O88871
Ensembl:ENSRNOT00000011573 GeneID:83633 KEGG:rno:83633
UCSC:RGD:619864 InParanoid:O88871 BindingDB:O88871
ChEMBL:CHEMBL4686 NextBio:616227 ArrayExpress:O88871
Genevestigator:O88871 GermOnline:ENSRNOG00000008431 Uniprot:O88871
Length = 940
Score = 151 (58.2 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 68/306 (22%), Positives = 125/306 (40%)
Query: 12 ILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATER-WPFLLQASQNQLAQMKAIAAI 70
+ G TS +AE + LSFA TP A ++ +P+ + + A AI +
Sbjct: 129 VFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKL 188
Query: 71 VQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEKLK 130
++ + W +V + +D+ + + L+ L EI + + P + ++KLK
Sbjct: 189 LKHFRWRRVGTLTQDVQRFSE-VRNDLTGVLYGEDIEISDTESFSNDPCT----SVKKLK 243
Query: 131 GGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD----AFTSLVH-SINTSS--- 182
G R+ + +A +F A + M Y WI A+ VH N+S
Sbjct: 244 GNDVRIILGQFDQNMAAKVFCCAFEESMFGSKYQWIIPGWYEPAWWEQVHVEANSSRCLR 303
Query: 183 ---ISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
+++M+G +GV P + + + ++F EY + + P YD +W
Sbjct: 304 RSLLAAMEGYIGVDFE-PLSSKQIKTISGKTPQQFEREYNSKRSGVGPSKFHGYAYDGIW 362
Query: 240 SVALAMEQKSEKLNQKLLRRILLSDF---DGLTGKV--EFMNQKVAPAHTYQIINLMGKS 294
+A +++ E L+ R + DF D GK+ MN+ T Q++ G+
Sbjct: 363 VIAKTLQRAMETLHASS-RHQRIQDFNYTDHTLGKIILNAMNETNFFGVTGQVVFRNGER 421
Query: 295 YRELGF 300
+ F
Sbjct: 422 MGTIKF 427
>UNIPROTKB|F1MIZ5 [details] [associations]
symbol:GABBR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043005 "neuron projection" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR000337 InterPro:IPR002455
InterPro:IPR002457 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 PRINTS:PR00248 PRINTS:PR01176 PRINTS:PR01178
PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0005737 GO:GO:0043005 InterPro:IPR001828
GO:GO:0004965 GeneTree:ENSGT00530000063129 EMBL:DAAA02023255
EMBL:DAAA02023256 EMBL:DAAA02023257 EMBL:DAAA02023258
EMBL:DAAA02023259 IPI:IPI00701390 Ensembl:ENSBTAT00000018355
OMA:NMFGSKY Uniprot:F1MIZ5
Length = 835
Score = 150 (57.9 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 66/306 (21%), Positives = 126/306 (41%)
Query: 12 ILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATER-WPFLLQASQNQLAQMKAIAAI 70
+ G TS +AE + LSFA TP A ++ +P+ + + A AI +
Sbjct: 24 VFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKL 83
Query: 71 VQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSSRLSEELEKLK 130
++ ++W +V + +D+ + + L+ L EI + + P + ++KLK
Sbjct: 84 LKHYQWRRVGTLTQDVQRFSE-VRNDLTGVLYGEDIEISDTESFSNDPCT----SVKKLK 138
Query: 131 GGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTD----AFTSLVHSINTSS---- 182
G R+ + +A +F A + M Y WI ++ VH+ SS
Sbjct: 139 GNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIPGWYEPSWWEQVHAEANSSRCLR 198
Query: 183 ---ISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDAVW 239
+++M+G +GV P + + + +++ EY + + P YD +W
Sbjct: 199 KHLLAAMEGYIGVDFE-PLSSKQIKTISGKTPQQYEREYNNKRSGVGPSKFHGYAYDGIW 257
Query: 240 SVALAMEQKSEKLNQKLLRRILLSDF---DGLTGKV--EFMNQKVAPAHTYQIINLMGKS 294
+A +++ E L+ R + DF D GK+ MN+ T Q++ G+
Sbjct: 258 VIAKTLQRAMETLHASS-RHQRIQDFNYTDHTLGKIILNAMNETNFFGVTGQVVFRNGER 316
Query: 295 YRELGF 300
+ F
Sbjct: 317 MGTIKF 322
>UNIPROTKB|F1RL86 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:FP102301 Ensembl:ENSSSCT00000003474 Uniprot:F1RL86
Length = 1328
Score = 139 (54.0 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 51/210 (24%), Positives = 96/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + + F YL N +G ++ ++ +++ +G + I
Sbjct: 486 GFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEE 545
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 546 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 603
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E + L G + G WL FN + E S++ LVW
Sbjct: 604 FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA 663
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 664 FFAVIFLASYTANLAAFMIQEEYVDTVSGL 693
Score = 72 (30.4 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 583 SDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVIE 639
+ LK+ K A + A K CK T+ +G + G G A KGS +
Sbjct: 746 TQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDL 805
Query: 640 ALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ ++ LE S I +EV + DI +++ F++L V G ++
Sbjct: 806 ALLQFLGDDEIEMLERLWLSGICHNDKIEV-MSSKLDIDNMA-GVFYMLLVAMG----LS 859
Query: 697 LVIFLWR--CNWKINENL 712
L++F W W++ L
Sbjct: 860 LLVFAWEHLVYWRLRHCL 877
Score = 42 (19.8 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 33/175 (18%), Positives = 71/175 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWAT--ERWPFLLQ 55
DL+ +V ++ S +VA I +++ +P+++ T E+ LQ
Sbjct: 105 DLLSGLRVHGVVFEDDSR-APAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQ 163
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLS--DALREA---GAEIIH 110
+ Q++ I +++ ++W + + A G LS + L + G E H
Sbjct: 164 LGSSTEQQLQVIFEVLEEYDWTSFVAV----TTRAPGHRAFLSYIEVLTDGSLVGWE--H 217
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW 165
AL P + + +L+ ++ ++ + E A +F A + + Y+W
Sbjct: 218 RGALTLDPGAGEAVLGAQLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVW 272
Score = 39 (18.8 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 227 PGALAVQ-TYDAVWSVALAMEQKSEKLNQKLLRR 259
P + + T D W V + EQ++ +L L R
Sbjct: 385 PSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSR 418
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 330 PGAPWYTPKGWTLPA 344
PG P P G LPA
Sbjct: 288 PGEPLLLPGGAPLPA 302
>UNIPROTKB|J9NUD0 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:EEQAFRF EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 Ensembl:ENSCAFT00000048003 Uniprot:J9NUD0
Length = 918
Score = 106 (42.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 73/328 (22%), Positives = 135/328 (41%)
Query: 9 VEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQLAQMKAIA 68
V AI GP T++V I + ++P + + + F + + + AI
Sbjct: 160 VVAIFGPSQGSCTNAVQSICNALEVPHIQLR-WKHHPLDNKDTFYVNLYPDYASLSHAIL 218
Query: 69 AIVQSWEWHQVTVIYEDIDSSATGI--LPHLSDALREAGAEI-IHVLALPHFPSSRLSEE 125
+VQ +W TV+Y+D +TG+ L L A + I L L S L +E
Sbjct: 219 DLVQYLKWRSATVVYDD----STGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKE 274
Query: 126 LEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDY--IWITTDAFTSLVHSINTSSI 183
+++ G + R+ + S +A + ++A M MM + Y I+ T D + + S +
Sbjct: 275 MKR--GREFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGV 331
Query: 184 SSMQGILGVRSHFPEDKPKFQDFCKRFR-KRFGAEYPEEDNNHEPGAL---AVQTYDAVW 239
+ + G R D P +++ +R A P ++ G + A YDAV
Sbjct: 332 N----LTGFRI-LNVDNPHVSAIVEKWSMERLQAA-PRAESGLLDGVMMTDAALLYDAVH 385
Query: 240 SVALAMEQ--------------KSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHT- 284
V++ ++ K+ + + + I + ++GLTG++ F K + T
Sbjct: 386 IVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVF--NKTSGLRTD 443
Query: 285 --YQIINLMGKSYRELGFWTYGLGFSDT 310
II+L ++G W+ G + T
Sbjct: 444 FDLDIISLKEDGLEKVGVWSPAEGLNIT 471
Score = 88 (36.0 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 35/126 (27%), Positives = 56/126 (44%)
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER---NHW----PELTGSALHQTG-TF---FWL 510
FL P + +W+ V + + V+++I R W P GS + + T FW
Sbjct: 611 FLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLNSFWF 670
Query: 511 ---SFNLHGEKLHSN-LS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
S G +L LS R+ +W F L+I +YTANL + LT +E +++ + L
Sbjct: 671 GMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDL 730
Query: 566 QSSNAI 571
I
Sbjct: 731 AKQTKI 736
Score = 81 (33.6 bits), Expect = 4.6e-06, Sum P(3) = 4.6e-06
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 376 FGGFSIELFKALVEKLPFYLPYNFIPFN--GSYDD------LVKQLYLNNFAGVVGDVAI 427
F G+ I+L K L L F + G+ DD ++K+L + V + I
Sbjct: 516 FEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTI 575
Query: 428 VARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVAVISIYNGFVVW 486
R + DF+ P+ G+ +++ N ++ FL P + +W+ V + + V++
Sbjct: 576 THVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLF 635
Query: 487 LIER 490
+I R
Sbjct: 636 VIAR 639
Score = 52 (23.4 bits), Expect = 9.3e-07, Sum P(3) = 9.3e-07
Identities = 15/71 (21%), Positives = 27/71 (38%)
Query: 592 AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLR 651
A+ +E + + C T G G G P GSP + A+L + G+
Sbjct: 789 ALLMESTTIEYVTQRNCN-LTQIGGLIDSKGYGIGTPMGSPYRDKITIAILSAAGGGQAA 847
Query: 652 ELETSMIASEK 662
E ++ ++
Sbjct: 848 HHEGEVVEGQR 858
>UNIPROTKB|K7GNS7 [details] [associations]
symbol:LOC100738146 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS50259 Pfam:PF01094 InterPro:IPR001828 InterPro:IPR000436
Pfam:PF00084 SUPFAM:SSF57535 GeneTree:ENSGT00530000063129
EMBL:CT737425 Ensembl:ENSSSCT00000035354 Uniprot:K7GNS7
Length = 898
Score = 150 (57.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 168 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 227
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 228 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 286
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 287 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 341
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 342 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 400
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 401 FQEAPLA---YDAIWALALALNKTS 422
>UNIPROTKB|B0UXY8 [details] [associations]
symbol:GABBR1 "Gamma-aminobutyric acid type B receptor
subunit 1" species:9606 "Homo sapiens" [GO:0004965 "G-protein
coupled GABA receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021 InterPro:IPR001828
InterPro:IPR000436 SUPFAM:SSF57535 EMBL:CR388210 HGNC:HGNC:4070
eggNOG:NOG273984 HOVERGEN:HBG051688 ChiTaRS:GABBR1 GO:GO:0004965
EMBL:BX927223 IPI:IPI00893592 Ensembl:ENST00000440316
Uniprot:B0UXY8
Length = 899
Score = 150 (57.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 169 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 228
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 229 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 287
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 288 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 342
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 343 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 401
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 402 FQEAPLA---YDAIWALALALNKTS 423
>UNIPROTKB|I3L9I7 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0009986 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0035235 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
EMBL:FP312836 Ensembl:ENSSSCT00000032251 OMA:SHERREQ Uniprot:I3L9I7
Length = 530
Score = 82 (33.9 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 401 PFNGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKT 459
P +++ +V +L V + I R + DF+ P+ G+ +MI QKS
Sbjct: 238 PDTKAWNGMVGELVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGV 297
Query: 460 LLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
FL P +W+ + I V++L+ R
Sbjct: 298 FSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 328
Score = 79 (32.9 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 22/65 (33%), Positives = 29/65 (44%)
Query: 530 VWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAIIGYSRCLGDYASDLKSRK 589
VW F L+I +YTANL + LT R + P + + E L I Y + R
Sbjct: 387 VWWFFTLIIISSYTANLAAFLTERMVSP-IESAEDLAKQTEI-AYGTLEAGSTKEFFRRS 444
Query: 590 TGAVF 594
AVF
Sbjct: 445 KIAVF 449
Score = 69 (29.3 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 265 FDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFW 301
F+GLTG V+F + +T +I + R++G+W
Sbjct: 115 FEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW 151
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(4) = 1.1e-06
Identities = 20/53 (37%), Positives = 21/53 (39%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSV 637
KS+ A LE I K C V G G G A PKGS L SV
Sbjct: 477 KSKGKYAYLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGIATPKGSALRTSV 528
Score = 42 (19.8 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 249 SEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYREL 298
++ + K++++ SD T +V++ K A TY + +M ++++ L
Sbjct: 28 TDTIPAKIMQQWKTSDARDHT-RVDWKRPKYTSALTYDGVKVMAEAFQSL 76
>UNIPROTKB|K7GP86 [details] [associations]
symbol:LOC100738146 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004965 "G-protein coupled GABA receptor activity"
evidence=IEA] InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS50259 Pfam:PF01094 InterPro:IPR001828 InterPro:IPR000436
Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
GeneTree:ENSGT00530000063129 EMBL:CT737425
Ensembl:ENSSSCT00000034718 Uniprot:K7GP86
Length = 960
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 230 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 289
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 290 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 348
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 349 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 403
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 404 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 462
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 463 FQEAPLA---YDAIWALALALNKTS 484
>UNIPROTKB|F1MF15 [details] [associations]
symbol:GABBR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0038037
"G-protein coupled receptor dimeric complex" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0004965 "G-protein coupled
GABA receptor activity" evidence=IEA] InterPro:IPR002455
InterPro:IPR002456 InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176
PRINTS:PR01177 PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021
GO:GO:0005737 GO:GO:0045211 GO:GO:0007214 GO:GO:0042734
InterPro:IPR001828 InterPro:IPR000436 Pfam:PF00084 SMART:SM00032
SUPFAM:SSF57535 PROSITE:PS50923 OMA:SEPPDRL GO:GO:0038037
GO:GO:0004965 GeneTree:ENSGT00530000063129 EMBL:DAAA02055415
IPI:IPI00854497 UniGene:Bt.16255 Ensembl:ENSBTAT00000022907
Uniprot:F1MF15
Length = 961
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 231 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 290
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 291 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 349
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 350 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 404
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 405 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 463
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 464 FQEAPLA---YDAIWALALALNKTS 485
>UNIPROTKB|Q9UBS5 [details] [associations]
symbol:GABBR1 "Gamma-aminobutyric acid type B receptor
subunit 1" species:9606 "Homo sapiens" [GO:0004965 "G-protein
coupled GABA receptor activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007214 "gamma-aminobutyric acid signaling pathway"
evidence=IEA] [GO:0038037 "G-protein coupled receptor dimeric
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0007194 "negative
regulation of adenylate cyclase activity" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002455 InterPro:IPR002456
InterPro:IPR017978 Pfam:PF00003 PRINTS:PR01176 PRINTS:PR01177
PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259
Pfam:PF01094 Reactome:REACT_111102 GO:GO:0005576 GO:GO:0008285
GO:GO:0005887 EMBL:CH471081 GO:GO:0005789 GO:GO:0031966
GO:GO:0045471 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0007214 GO:GO:0014053
GO:GO:0008021 GO:GO:0043197 GO:GO:0030673 GO:GO:0042734
GO:GO:0007194 GO:GO:0045121 GO:GO:0035094 GO:GO:0032811
GO:GO:0050805 GO:GO:0001649 InterPro:IPR001828 InterPro:IPR000436
Pfam:PF00084 SMART:SM00032 SUPFAM:SSF57535 PROSITE:PS50923
GO:GO:0033602 GO:GO:0060124 EMBL:AJ225028 EMBL:AJ225029
EMBL:AJ012185 EMBL:AJ012186 EMBL:AF099148 EMBL:Y11044 EMBL:AJ012187
EMBL:AJ010170 EMBL:AJ010171 EMBL:AJ010172 EMBL:AJ010173
EMBL:AJ010174 EMBL:AJ010175 EMBL:AJ010176 EMBL:AJ010177
EMBL:AJ010178 EMBL:AJ010179 EMBL:AJ010180 EMBL:AJ010181
EMBL:AJ010182 EMBL:AJ010183 EMBL:AJ010184 EMBL:AJ010185
EMBL:AJ010186 EMBL:AJ010187 EMBL:AJ010188 EMBL:AJ010189
EMBL:AJ010190 EMBL:AJ010191 EMBL:AJ012288 EMBL:AL031983
EMBL:AL662826 EMBL:AL645936 EMBL:BX000688 EMBL:CR759766
EMBL:CR788300 EMBL:CR936483 EMBL:CR388210 EMBL:CR759870
EMBL:BC042598 EMBL:BC050532 IPI:IPI00002756 IPI:IPI00218738
IPI:IPI00218740 IPI:IPI00218741 IPI:IPI00296373 PIR:JE0356
RefSeq:NP_001461.1 RefSeq:NP_068703.1 RefSeq:NP_068704.2
UniGene:Hs.167017 ProteinModelPortal:Q9UBS5 SMR:Q9UBS5
IntAct:Q9UBS5 MINT:MINT-2793192 STRING:Q9UBS5 PhosphoSite:Q9UBS5
DMDM:12643873 PaxDb:Q9UBS5 PRIDE:Q9UBS5 DNASU:2550
Ensembl:ENST00000355973 Ensembl:ENST00000376977
Ensembl:ENST00000377012 Ensembl:ENST00000377016
Ensembl:ENST00000377034 Ensembl:ENST00000383537
Ensembl:ENST00000383541 Ensembl:ENST00000383542
Ensembl:ENST00000383543 Ensembl:ENST00000383636
Ensembl:ENST00000383637 Ensembl:ENST00000383638
Ensembl:ENST00000383639 Ensembl:ENST00000414980
Ensembl:ENST00000417759 Ensembl:ENST00000418225
Ensembl:ENST00000419674 Ensembl:ENST00000423604
Ensembl:ENST00000425097 Ensembl:ENST00000434660
Ensembl:ENST00000438094 Ensembl:ENST00000439457
Ensembl:ENST00000443440 Ensembl:ENST00000446436
Ensembl:ENST00000448754 Ensembl:ENST00000449163
Ensembl:ENST00000452300 Ensembl:ENST00000458612
Ensembl:ENST00000494877 Ensembl:ENST00000546913
Ensembl:ENST00000547410 Ensembl:ENST00000548767
Ensembl:ENST00000550428 Ensembl:ENST00000551140
Ensembl:ENST00000551423 Ensembl:ENST00000552399 GeneID:2550
KEGG:hsa:2550 UCSC:uc003nmt.4 UCSC:uc003nmu.4 UCSC:uc011dls.1
CTD:2550 GeneCards:GC06M029523 HGNC:HGNC:4070 HPA:HPA050483
MIM:603540 neXtProt:NX_Q9UBS5 PharmGKB:PA28484 eggNOG:NOG273984
HOVERGEN:HBG051688 InParanoid:Q9UBS5 KO:K04615 OMA:SEPPDRL
OrthoDB:EOG4BG8VH PhylomeDB:Q9UBS5 BindingDB:Q9UBS5
ChEMBL:CHEMBL2064 ChiTaRS:GABBR1 DrugBank:DB00181 DrugBank:DB00837
GenomeRNAi:2550 NextBio:10061 ArrayExpress:Q9UBS5 Bgee:Q9UBS5
CleanEx:HS_GABBR1 Genevestigator:Q9UBS5 GermOnline:ENSG00000204681
GO:GO:0038037 GO:GO:0004965 GO:GO:0014048 Uniprot:Q9UBS5
Length = 961
Score = 150 (57.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/265 (23%), Positives = 116/265 (43%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWAT-ERWPFLLQASQNQ 60
+L+ + ++ IL P S ++ VAE A + VLS+ ++P + +R+P + +
Sbjct: 231 ELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSA 290
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+ + W W ++ I + + T L L + ++EAG EI + P+
Sbjct: 291 TLHNPTRVKLFEKWGWKKIATIQQTTEVF-TSTLDDLEERVKEAGIEITFRQSFFSDPAV 349
Query: 121 RLSEELEKLKGGQCRVFVVHLSLEL-AVHLFEKANKMKMMEKDYIWIT----TDAFTSLV 175
++ LK R+ +V L E A +F + K ++ K Y+W D + +
Sbjct: 350 ----PVKNLKRQDARI-IVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIY 404
Query: 176 H-SINTSSISSMQGILG-VRSHF----PEDKPKF-----QDFCKRFRKRFGAEYPEEDNN 224
SIN + + + G + + P + Q+F ++ KR +PEE
Sbjct: 405 DPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRL-KRHPEETGG 463
Query: 225 HEPGALAVQTYDAVWSVALAMEQKS 249
+ LA YDA+W++ALA+ + S
Sbjct: 464 FQEAPLA---YDAIWALALALNKTS 485
>WB|WBGene00001615 [details] [associations]
symbol:glr-4 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371 HSSP:P19491
EMBL:FO080131 GeneID:174258 KEGG:cel:CELE_C06A8.9 CTD:174258
PIR:T15429 RefSeq:NP_001254126.1 ProteinModelPortal:Q17697
SMR:Q17697 EnsemblMetazoa:C06A8.9a UCSC:C06A8.9 WormBase:C06A8.9a
InParanoid:Q17697 OMA:IESRHEA NextBio:883261 ArrayExpress:Q17697
Uniprot:Q17697
Length = 951
Score = 83 (34.3 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 65/329 (19%), Positives = 132/329 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSS-VAEIASKKQIPVLSFADATPNWATERWPFLLQASQNQ 60
++M V +L + SE+ S + + IP LS + + + LL S+
Sbjct: 82 EIMQQGIVAVVLSNEESEQDSQLIKSMCHYFNIPCLSLQSTSLRDSVSDFVTLLGPSRG- 140
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLS-DALREAGAEIIHVLALPHFPS 119
A +A + + S W + Y+ S + P + + + G IH+ + P+
Sbjct: 141 -AGARATSEFLDSMRWTGFLLAYQH-GSDLEDLSPLMQYKQIVDTGGRRIHI-KIRRLPN 197
Query: 120 SRLSEELEK-LKGGQCRV----FVVHLS-LELAVHLFEKANKMKMMEKDYIWITTDAFTS 173
+ +++ E LK + R+ ++H + + + +L ++A + M E + ++ T+ S
Sbjct: 198 N--TDDYEPFLKYVKTRLKQTNIIIHSNNITVLYNLLQQARGLNMAEPPFSYVFTNTDLS 255
Query: 174 LVHSI--NTSSISSMQGILGVR--SHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEP-- 227
L+ N S I G++ + P K + + + Y + H P
Sbjct: 256 LLEDFLNNMYGASFHCNITGLQLVKNDPMMKTQLALTSEAVYVVGMSIYRMRELGHAPRQ 315
Query: 228 GALAVQTYDAVWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQI 287
++ ++D +WS M + KL LR + LTG V+F + Y
Sbjct: 316 SSIMCDSHD-IWSDGRIMNEGIRKLK---LR-------NQLTGDVQFKSNGERDDIMYHG 364
Query: 288 INLMGKSYRELGFWTYGLGFSDTIIDPKY 316
+ + + +LG W+ G++ D +Y
Sbjct: 365 VGRINSQFVKLGNWSEKRGWN---FDSRY 390
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 26/112 (23%), Positives = 49/112 (43%)
Query: 376 FGGFSIELFKALVEKLPF-YL-------PYNFIPFNGSYDDLVKQLYLNNFAGVVGDVAI 427
+ GF I+L + + L F Y Y +G ++ ++ L + + V I
Sbjct: 429 YEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLSLSAVTI 488
Query: 428 VARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLL--FLKPFTRAVWILVAV 476
R + DFT P+ G+ +++ + +K L FL+P + VWI + +
Sbjct: 489 TYSRAEVVDFTLPFMHLGISILLARTSEETDKGSLWTFLEPLSLTVWISLLI 540
Score = 67 (28.6 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 29/120 (24%), Positives = 51/120 (42%)
Query: 589 KTG--AVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSE 646
K+G A +E + + +L + C+ ++ G G G A PKGSPL + +L++ E
Sbjct: 704 KSGGYAYMMESSMLEYYLERDCELQSIGG-LLDSKGYGIALPKGSPLRDILSRTVLQLQE 762
Query: 647 SGKLRELETSMIASEK-CMEVNLHDDDDISSLSPSG-FWVLFVLSGGISTIALVIFLWRC 704
L L+ + + ++ P F + +VL G+ +V FL C
Sbjct: 763 RTILEALKNKWWRDRREGPSCGPPPSEKATNSKPQNIFGIFYVLLTGL----IVAFLLAC 818
Score = 65 (27.9 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 524 SRMTTLVW-LFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+R+ +VW +F ++IS +YTA L + LT + + + + L + I
Sbjct: 608 TRLIAVVWWMFTQIIIS-SYTAQLAAFLTVERMSTPIESTQDLANQQKI 655
>UNIPROTKB|F5H470 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899 HGNC:HGNC:4573
ChiTaRS:GRIA3 IPI:IPI01012695 ProteinModelPortal:F5H470 SMR:F5H470
Ensembl:ENST00000542149 ArrayExpress:F5H470 Bgee:F5H470
Uniprot:F5H470
Length = 824
Score = 99 (39.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 88/475 (18%), Positives = 197/475 (41%)
Query: 42 TPNWATER-WPFLLQASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDA 100
TP++ T+ F++Q A AI +++ ++W + +Y+ IL + +A
Sbjct: 126 TPSFPTDADVQFVIQMRP---ALKGAILSLLGHYKWEKFVYLYDT--ERGFSILQAIMEA 180
Query: 101 LREAGAEII-----HVLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANK 155
+ ++ ++ + F R+ EE+++ Q + +++ +E + E+
Sbjct: 181 AVQNNWQVTARSVGNIKDVQEF--RRIIEEMDRR---QEKRYLIDCEVERINTILEQVVI 235
Query: 156 MKMMEKDYIWITTD-AFTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRF 214
+ + Y ++ + FT ++ +++ G V + + P Q F +R+ +
Sbjct: 236 LGKHSRGYHYMLANLGFTDILLERVMHGGANITGFQIVNN----ENPMVQQFIQRWVRLD 291
Query: 215 GAEYPEEDNNHEPGALAVQTYDAVWSVALAMEQ-KSEKLNQKLLRRILLSDFDGLTGKVE 273
E+PE N A+ T+DA+ +A A + ++++ + RR S D L
Sbjct: 292 EREFPEAKNAPLKYTSAL-THDAILVIAEAFRYLRRQRVD--VSRRG--SAGDCLANPAV 346
Query: 274 FMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIIDPKYNCSSMKDLGQVFWPGAP 333
+Q + +++ + G + + F TYG + TI + S + G +W
Sbjct: 347 PWSQGIDIERALKMVQVQGMT-GNIQFDTYGRRTNYTIDVYEMKVSGSRKAG--YWNEYE 403
Query: 334 WYTP------KGWTLPAKDQPLRIGVPIGSEFQQYVNVEYDELRNFTYFGGFSIELFKAL 387
+ P + ++++ + + + S + Y +++L + G+ ++L +
Sbjct: 404 RFVPFSDQQISNDSASSENRTIVVTTILESPYVMYKK-NHEQLEGNERYEGYCVDLAYEI 462
Query: 388 VEKLPFYLPYNFIPFNGSYD--DLVKQLYLNNFAG--VVG--DVAIVAR-----RCQYAD 436
+ + + + +G Y D +++ N G V G D+A+ R + D
Sbjct: 463 AKHVRIKYKLSIVG-DGKYGARDPETKIW-NGMVGELVYGRADIAVAPLTITLVREEVID 520
Query: 437 FTHPYTESGL-VMIFPVQKSGNKTLLFLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P+ G+ +MI QKS FL P +W+ + I V++L+ R
Sbjct: 521 FSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVSR 575
Score = 75 (31.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 30/113 (26%), Positives = 52/113 (46%)
Query: 470 VWILVAVISIYNGFVVWLIERNHW----PELTGSALHQTGTF--FWLS---FNLHGEKLH 520
V +++ ++S ++ + W +E N+ P+ ++ G F W S F G +
Sbjct: 566 VSVVLFLVSRFSPYE-WHLEDNNEEPRDPQSPPDPPNEFGIFNSLWFSLGAFMQQGCDIS 624
Query: 521 S-NLS-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
+LS R+ VW F L+I +YTANL + LT + + + E L I
Sbjct: 625 PRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 677
Score = 69 (29.3 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 26/70 (37%), Positives = 33/70 (47%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGS L +V A+LK+
Sbjct: 727 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSALRNAVNLAVLKL 785
Query: 645 SESGKLRELE 654
+E G L +L+
Sbjct: 786 NEQGLLDKLK 795
>MGI|MGI:95823 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, NMDA2D (epsilon
4)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016595 "glutamate binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051930 "regulation of sensory perception of
pain" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95823 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0045202
GO:GO:0035249 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0016595 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0022843 GO:GO:0004972
GeneTree:ENSGT00540000070221 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 OMA:ARCGCPR
EMBL:AB154245 EMBL:D12822 IPI:IPI00131279 PIR:S27224
RefSeq:NP_032198.2 UniGene:Mm.322594 ProteinModelPortal:Q03391
SMR:Q03391 IntAct:Q03391 STRING:Q03391 PhosphoSite:Q03391
PaxDb:Q03391 PRIDE:Q03391 Ensembl:ENSMUST00000002848 GeneID:14814
KEGG:mmu:14814 InParanoid:Q03391 BindingDB:Q03391 ChEMBL:CHEMBL2893
NextBio:287011 Bgee:Q03391 Genevestigator:Q03391
GermOnline:ENSMUSG00000002771 Uniprot:Q03391
Length = 1323
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N +G ++ ++ +++ +G + I
Sbjct: 483 GFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEE 542
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 543 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 600
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E + L G + G WL FN + E S++ LVW
Sbjct: 601 FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA 660
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 661 FFAVIFLASYTANLAAFMIQEEYVDTVSGL 690
Score = 72 (30.4 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 583 SDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVIE 639
+ LK+ K A + A K CK T+ +G + G G A KGS +
Sbjct: 743 TQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDL 802
Query: 640 ALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ ++ LE S I +EV + DI +++ F++L V G ++
Sbjct: 803 ALLQFLGDDEIEMLERLWLSGICHNDKIEV-MSSKLDIDNMA-GVFYMLLVAMG----LS 856
Query: 697 LVIFLWR--CNWKINENL 712
L++F W W++ L
Sbjct: 857 LLVFAWEHLVYWRLRHCL 874
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 33/175 (18%), Positives = 71/175 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWAT--ERWPFLLQ 55
DL+ +V ++ S +VA I +++ +P+++ T E+ LQ
Sbjct: 102 DLLSGLRVHGVVFEDDSR-APAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQ 160
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLS--DALREA---GAEIIH 110
+ Q++ I +++ ++W + + A G LS + L + G E H
Sbjct: 161 LGSSTEQQLQVIFEVLEEYDWTSFVAV----TTRAPGHRAFLSYIEVLTDGSLVGWE--H 214
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW 165
AL P + + +L+ ++ ++ + E A +F A + + Y+W
Sbjct: 215 RGALTLDPGAGEAVLGAQLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVW 269
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 227 PGALAVQ-TYDAVWSVALAMEQKSEKLNQKLLRR 259
P + + T D W V + EQ++ +L L R
Sbjct: 382 PSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSR 415
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 330 PGAPWYTPKGWTLPA 344
PG P P G LPA
Sbjct: 285 PGEPLLLPGGAPLPA 299
>RGD|2740 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, N-methyl D-aspartate
2D" species:10116 "Rattus norvegicus" [GO:0001964 "startle response"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IDA;IMP] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016595 "glutamate binding" evidence=IMP]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IDA] [GO:0022843 "voltage-gated cation channel
activity" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IDA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IMP] [GO:0042165 "neurotransmitter binding" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051930 "regulation of sensory perception
of pain" evidence=ISO] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N +G ++ ++ +++ +G + I
Sbjct: 483 GFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEE 542
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 543 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 600
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E + L G + G WL FN + E S++ LVW
Sbjct: 601 FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA 660
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 661 FFAVIFLASYTANLAAFMIQEEYVDTVSGL 690
Score = 72 (30.4 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 583 SDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVIE 639
+ LK+ K A + A K CK T+ +G + G G A KGS +
Sbjct: 743 TQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDL 802
Query: 640 ALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ ++ LE S I +EV + DI +++ F++L V G ++
Sbjct: 803 ALLQFLGDDEIEMLERLWLSGICHNDKIEV-MSSKLDIDNMA-GVFYMLLVAMG----LS 856
Query: 697 LVIFLWR--CNWKINENL 712
L++F W W++ L
Sbjct: 857 LLVFAWEHLVYWRLRHCL 874
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 33/175 (18%), Positives = 71/175 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWAT--ERWPFLLQ 55
DL+ +V ++ S +VA I +++ +P+++ T E+ LQ
Sbjct: 102 DLLSGLRVHGVVFEDDSR-APAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQ 160
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLS--DALREA---GAEIIH 110
+ Q++ I +++ ++W + + A G LS + L + G E H
Sbjct: 161 LGSSTEQQLQVIFEVLEEYDWTSFVAV----TTRAPGHRAFLSYIEVLTDGSLVGWE--H 214
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW 165
AL P + + +L+ ++ ++ + E A +F A + + Y+W
Sbjct: 215 RGALTLDPGAGEAVLGAQLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVW 269
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 227 PGALAVQ-TYDAVWSVALAMEQKSEKLNQKLLRR 259
P + + T D W V + EQ++ +L L R
Sbjct: 382 PSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSR 415
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 330 PGAPWYTPKGWTLPA 344
PG P P G LPA
Sbjct: 285 PGEPLLLPGGSPLPA 299
>UNIPROTKB|Q62645 [details] [associations]
symbol:Grin2d "Glutamate receptor ionotropic, NMDA 2D"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 378 GFSIELFKALVEKLPF----YLPYNFI---PFNGSYDDLVKQLYLNNFAGVVGDVAIVAR 430
GF I++ K L + F YL N +G ++ ++ +++ +G + I
Sbjct: 483 GFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEE 542
Query: 431 RCQYADFTHPYTESGL-VMIFPVQKSGNKT-LLFLKPFTRAVWILVAVISI-YNGFVVWL 487
R + DF+ P+ E+G+ VM+ + +G + FL+P++ AVW+++ V+ + V++
Sbjct: 543 RSEIVDFSVPFVETGISVMV--ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFI 600
Query: 488 IER----NHWPELT-----GSALHQTGTFFWLS----FN--LHGEKLHSNLSRMTTLVWL 532
E + L G + G WL FN + E S++ LVW
Sbjct: 601 FEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKIMVLVWA 660
Query: 533 FVALVISQTYTANLTSMLTARGLEPTVNNI 562
F A++ +YTANL + + TV+ +
Sbjct: 661 FFAVIFLASYTANLAAFMIQEEYVDTVSGL 690
Score = 72 (30.4 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 583 SDLKSRKTGAVFLEVAEAKIFLAKY--CKGFTV-AGPTYKVGGLGFAFPKGSPLLPSVIE 639
+ LK+ K A + A K CK T+ +G + G G A KGS +
Sbjct: 743 TQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPIDL 802
Query: 640 ALLKVSESGKLRELET---SMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIA 696
ALL+ ++ LE S I +EV + DI +++ F++L V G ++
Sbjct: 803 ALLQFLGDDEIEMLERLWLSGICHNDKIEV-MSSKLDIDNMA-GVFYMLLVAMG----LS 856
Query: 697 LVIFLWR--CNWKINENL 712
L++F W W++ L
Sbjct: 857 LLVFAWEHLVYWRLRHCL 874
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 33/175 (18%), Positives = 71/175 (40%)
Query: 2 DLMDSQKVEAILGPQTSEETSSVAEI----ASKKQIPVLSFADATPNWAT--ERWPFLLQ 55
DL+ +V ++ S +VA I +++ +P+++ T E+ LQ
Sbjct: 102 DLLSGLRVHGVVFEDDSR-APAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQ 160
Query: 56 ASQNQLAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLS--DALREA---GAEIIH 110
+ Q++ I +++ ++W + + A G LS + L + G E H
Sbjct: 161 LGSSTEQQLQVIFEVLEEYDWTSFVAV----TTRAPGHRAFLSYIEVLTDGSLVGWE--H 214
Query: 111 VLALPHFPSSRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIW 165
AL P + + +L+ ++ ++ + E A +F A + + Y+W
Sbjct: 215 RGALTLDPGAGEAVLGAQLRSVSAQIRLLFCAREEAEPVFRAAEEAGLTGPGYVW 269
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 227 PGALAVQ-TYDAVWSVALAMEQKSEKLNQKLLRR 259
P + + T D W V + EQ++ +L L R
Sbjct: 382 PSLVVISLTRDRTWEVVGSWEQQTLRLKYPLWSR 415
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 330 PGAPWYTPKGWTLPA 344
PG P P G LPA
Sbjct: 285 PGEPLLLPGGSPLPA 299
>ZFIN|ZDB-GENE-051202-1 [details] [associations]
symbol:grin1a "glutamate receptor, ionotropic,
N-methyl D-aspartate 1a" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:BX005379 IPI:IPI00920462
Ensembl:ENSDART00000129744 Uniprot:E7F101
Length = 966
Score = 111 (44.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 41/157 (26%), Positives = 71/157 (45%)
Query: 421 VVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL--FLKPFTRAVWILVAVIS 478
+V + I R QY +F+ P+ GL ++ V+K ++ L F++PF +W+LV +
Sbjct: 529 IVAPLTINNERAQYIEFSKPFKYQGLTIL--VKKEIPRSTLDSFMQPFQSTLWLLVGLSV 586
Query: 479 IYNGFVVWLIER----------NHWPELTGSALHQTGTFFW-LSFNLH-GEKLHSNLS-R 525
+++L++R + E L F W + N GE + S R
Sbjct: 587 HVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSAR 646
Query: 526 MTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
+ +VW A++I +YTANL + L E + I
Sbjct: 647 ILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI 683
Score = 70 (29.7 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 25/117 (21%), Positives = 55/117 (47%)
Query: 585 LKSRKTGAVFLEVAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
++ K A + A + ++ C T G + G G K SP +V A+L
Sbjct: 737 VRDNKLHAFIWDSAVLEFEASQKCDLVTT-GELFFRSGFGIGMRKDSPWKQNVSLAILSS 795
Query: 645 SESGKLRELETSMIASEKCMEVNLHDDDDISSLSPSGFWVLFVLSGGISTIALVIFL 701
E+G + +L+ + + ++C + + ++ + +G ++L ++GGI+ +IF+
Sbjct: 796 HENGFMEDLDKTWVRYQEC-DSRSNAPATLTFENMAGVFML--VAGGIAAGIFLIFI 849
Score = 62 (26.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 21/92 (22%), Positives = 39/92 (42%)
Query: 256 LLRRILLSDF--DGLTGKVEFMNQKVAPAHTYQIINLMGKSYRELGFWTYGLGFSDTIID 313
L +R+L+S +GLTG+VEF + Y I+N ++G + ++
Sbjct: 337 LFKRVLMSSKYPEGLTGRVEFNDDGDRKYAHYSILNYQKSRLIQVGIYN-----GTQVV- 390
Query: 314 PKYNCSSMKDLGQVFWPGAPWYTPKGWTLPAK 345
M ++ WPG P+G+ + +
Sbjct: 391 -------MNKQRKIIWPGGETERPRGFQMSTR 415
Score = 57 (25.1 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 37/184 (20%), Positives = 76/184 (41%)
Query: 120 SRLSEELEKLKGGQCRVFVVHLSLELAVHLFEKANKMKMMEKDYIWITTDAFTSLVHSIN 179
+ L+ L + K + RV ++ S E A +++ A + M Y+W+ + ++
Sbjct: 219 TNLTALLLEAKELEARVIILSASEEDAAAVYKTARFLNMTGSGYVWLVGE------REMS 272
Query: 180 TSSISSM-QGILGVRS-HFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGALAVQTYDA 237
++S G++G++ + + D + E E++N EP V +
Sbjct: 273 GKALSEAPDGLIGLQLINGKNESAHISDAVAVVAQSI-QELFEKENITEPPRGCVGNTN- 330
Query: 238 VWSVALAMEQKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINLMGKSYRE 297
+W K+ L +++L + GLTG+VEF + Y I+N +
Sbjct: 331 IW--------KTGPLFKRVLMSSKYPE--GLTGRVEFNDDGDRKYAHYSILNYQKSRLIQ 380
Query: 298 LGFW 301
+G +
Sbjct: 381 VGIY 384
>FB|FBgn0004619 [details] [associations]
symbol:GluRIA "Glutamate receptor IA" species:7227
"Drosophila melanogaster" [GO:0006812 "cation transport"
evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;NAS] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812
InterPro:IPR001828 EMBL:M97192 EMBL:BT003218 EMBL:BT050435
PIR:A46421 RefSeq:NP_476855.1 UniGene:Dm.6460
ProteinModelPortal:Q03445 SMR:Q03445 STRING:Q03445 PaxDb:Q03445
EnsemblMetazoa:FBtr0076982 GeneID:38742 KEGG:dme:Dmel_CG8442
CTD:38742 FlyBase:FBgn0004619 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 InParanoid:Q03445 KO:K05313
OMA:EWRIVRR OrthoDB:EOG4WM38M PhylomeDB:Q03445 GenomeRNAi:38742
NextBio:810146 Bgee:Q03445 GermOnline:CG8442 GO:GO:0008328
GO:GO:0004971 GO:GO:0005234 Uniprot:Q03445
Length = 991
Score = 91 (37.1 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 23/88 (26%), Positives = 41/88 (46%)
Query: 404 GSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLLF 462
G +D +V +L + + I A R + DF+ P+ G+ +MI K F
Sbjct: 546 GGWDGMVGELIRKEADIAISAMTITAERERVIDFSKPFMTLGISIMIKKPVKQTPGVFSF 605
Query: 463 LKPFTRAVWILVAVISIYNGFVVWLIER 490
L P ++ +WI V + + FV++ + R
Sbjct: 606 LNPLSQEIWISVILSYVGVSFVLYFVTR 633
Score = 76 (31.8 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 21/80 (26%), Positives = 43/80 (53%)
Query: 622 GLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSM-IASEKC-MEVNLHDDDDISSLSP 679
G G A P GSPL + EA+L + E+G+L + +C ++ +++S +
Sbjct: 837 GFGVATPIGSPLRKRLNEAVLTLKENGELLRIRNKWWFDKTECNLDQETSTPNELSLSNV 896
Query: 680 SGFWVLFVLSGGISTIALVI 699
+G + ++L GG+ +A+++
Sbjct: 897 AGIY--YILIGGL-LLAVIV 913
Score = 69 (29.3 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 525 RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
R+ VW F +++ +YTANL + LT + + E L
Sbjct: 706 RIAAAVWWFFTIILISSYTANLAAFLTVERMVAPIKTPEDL 746
Score = 50 (22.7 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 11/56 (19%), Positives = 32/56 (57%)
Query: 247 QKSEKLNQKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL-MGKSYRELGFW 301
++ EK++ ++LR++ + DGL+G++ F +T ++ + + + +++ W
Sbjct: 395 EQGEKIS-RVLRKV---EIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEW 446
Score = 47 (21.6 bits), Expect = 5.2e-06, Sum P(5) = 5.2e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 283 HTYQIINLMGKSYRELGFWTYG 304
HTY + +L+ + Y L +TYG
Sbjct: 478 HTYIVSSLLEEPYLSLKQYTYG 499
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(5) = 2.7e-06
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 65 KAIAAIVQSWEWHQVTVIYEDID 87
+AI +Q + W + +Y+ D
Sbjct: 157 QAIIDTIQYYGWQSIIYLYDSHD 179
>WB|WBGene00001616 [details] [associations]
symbol:glr-5 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080218 PIR:T25941 RefSeq:NP_505244.1
ProteinModelPortal:O01623 SMR:O01623 STRING:O01623
EnsemblMetazoa:ZC196.7 GeneID:179251 KEGG:cel:CELE_ZC196.7
UCSC:ZC196.7 CTD:179251 WormBase:ZC196.7 HOGENOM:HOG000016348
InParanoid:O01623 OMA:IFRERED NextBio:904564 ArrayExpress:O01623
Uniprot:O01623
Length = 932
Score = 94 (38.1 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 369 ELRNFTYFGGFSIELFKALVEKLPF-YL-------PYNFIPF-NGSYDDLVKQLYLNNFA 419
EL + F GF I+L L + L F Y Y + NGS+D ++ ++
Sbjct: 458 ELDANSKFEGFCIDLLAELSKDLGFTYTIHAVKDGKYGNDKYGNGSWDGMMGEILRGEAE 517
Query: 420 GVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLL-FLKPFTRAVWILVA--V 476
V + + RR + DFT P+ G+ +++ V L FL P + +W +A +
Sbjct: 518 MAVAPLTVNYRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFSFLNPLSWQIWTAIATSI 577
Query: 477 ISIYNG 482
I++ G
Sbjct: 578 ITVTLG 583
Score = 66 (28.3 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 531 WLFVALVISQTYTANLTSMLT-ARGLEPTVNNIETLQSSNAIIGYSRCLG 579
W+F ++IS YTANL ++LT +R P + N++ L ++ I Y G
Sbjct: 662 WVFYLVIIS-AYTANLAAVLTVSRPYIP-IKNLDDL-ANQTTISYGTIRG 708
Score = 62 (26.9 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 51/263 (19%), Positives = 110/263 (41%)
Query: 3 LMDSQKVEAILGPQTSEETSSVAEIASKKQIPVLS-FADATPNWATERWPFLLQASQNQL 61
+++ + A+LG + + + I IP L+ D + + F + QL
Sbjct: 81 MLEKDHIVALLGGSHAALNAQLERITDDLDIPFLTAIDDLRTDMGKSKIDFW---PRPQL 137
Query: 62 AQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAE--IIHVLALPHFPS 119
+A+ + W W+++ ++YE + L L ++ A +I V + +
Sbjct: 138 --FEAVVDMFTHWRWNRIVLVYEGDERIRR--LEQLLESEEYASIRFYLIKVHDGDYMKA 193
Query: 120 SRLSEELEK---LKGGQCRVF---VVHLSLELAVHLFEKANKMKMME-KDYIWITTDAFT 172
+R +ELE+ L C F +V ++ E + +M ++E K + +T +
Sbjct: 194 ARQVKELEECRLLHKKDCSEFSRLLVDMNPEHTYTFLLASLQMGLIELKHWFLLTNMELS 253
Query: 173 SLVHSINTSSISSMQGILGVRSHF-PEDKPKFQDFCKRFRKRFGAEYP-EEDNNHEPGAL 230
++ + + + V S F E++ F +F F++ ++ + DN+ +
Sbjct: 254 TMDMELFRYNHARFISPYPVDSTFLTENRDAF-NF-SHFKEHITEKWAMKTDNSRNLKMM 311
Query: 231 -AVQTYDAVWSVALAMEQKSEKL 252
AV T+DAV++ A + S +
Sbjct: 312 EAVFTFDAVYAFANVFNELSSHM 334
Score = 60 (26.2 bits), Expect = 3.6e-06, Sum P(4) = 3.6e-06
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 232 VQTYDAVWSVALAMEQKSEKLN--QKLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIIN 289
+Q D ++ + S K + L+ I+ +D GL+G + +N ++ I
Sbjct: 334 MQMNDVPQTLCRKSSRNSRKYQHGRSLIDNIVHNDLHGLSGDLRRLNGHPLKSNFSMRIQ 393
Query: 290 LMGKSYR--ELGFW 301
L+G S R ++GFW
Sbjct: 394 LLGYSGRLDDIGFW 407
Score = 59 (25.8 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 68 AAIVQSWEWHQVTVIYEDIDS--SATGILPHLSDALREAGA--EIIHVLALPHFPSSRLS 123
AA+ S EW IY DID +L H DA+++A E H++AL + L+
Sbjct: 41 AAVRYSVEWLSQRGIYGDIDLVIEYIDVLDHY-DAIKKACKMLEKDHIVALLGGSHAALN 99
Query: 124 EELEKL 129
+LE++
Sbjct: 100 AQLERI 105
>UNIPROTKB|F1N987 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00576871 Ensembl:ENSGALT00000036430 Uniprot:F1N987
Length = 227
Score = 107 (42.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 41/122 (33%), Positives = 55/122 (45%)
Query: 586 KSRKTGAVFLE-VAEAKIFLAKYCKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKV 644
KS+ A LE I K C V G G G A PKGSPL V A+LK+
Sbjct: 91 KSKGKFAFLLESTMNEYIEQRKPCDTMKVGG-NLDSKGYGVATPKGSPLRTPVNLAVLKL 149
Query: 645 SESGKLRELETSMIASE-KCMEVNLHDDDDISSLSPSGF-WVLFVLSGGISTIALVIFLW 702
SE+G L +L+ + +C + D S+LS S V ++L GG+ LV +
Sbjct: 150 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 209
Query: 703 RC 704
C
Sbjct: 210 FC 211
Score = 69 (29.3 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 531 WLFVALVISQTYTANLTSMLTARGLEPTVNNIETLQSSNAI 571
W F L+I +YTANL + LT + + + E L I
Sbjct: 1 WWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI 41
>FB|FBgn0264000 [details] [associations]
symbol:GluRIB "Glutamate receptor IB" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0006812 "cation
transport" evidence=ISS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 InterPro:IPR001828 OrthoDB:EOG4WM38M
GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 HSSP:P19491
FlyBase:FBgn0264000 EMBL:AJ251886 EMBL:AJ251887 SMR:Q9TVG7
STRING:Q9TVG7 InParanoid:Q9TVG7 Uniprot:Q9TVG7
Length = 1095
Score = 83 (34.3 bits), Expect = 5.2e-06, Sum P(5) = 5.2e-06
Identities = 21/89 (23%), Positives = 40/89 (44%)
Query: 403 NGSYDDLVKQLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGL-VMIFPVQKSGNKTLL 461
+G +D +V +L + + I A R + DF+ P+ G+ +MI K
Sbjct: 565 HGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFS 624
Query: 462 FLKPFTRAVWILVAVISIYNGFVVWLIER 490
F+ P ++ +W+ V I V++ + R
Sbjct: 625 FMNPLSQEIWVSVIFSYIGVSIVLFFVSR 653
Score = 78 (32.5 bits), Expect = 5.2e-06, Sum P(5) = 5.2e-06
Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 622 GLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEKCMEVNLHDDDDIS--SLSP 679
G G A P GS L + A+L + E+G+L +L EK E + H D + S LS
Sbjct: 896 GFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWY-EKA-ECSTHKDGETSHSELSL 953
Query: 680 SGF-WVLFVLSGGISTIALVIFLWRC 704
S + ++L GG+ V L C
Sbjct: 954 SNVAGIFYILIGGLLVSVFVAILEYC 979
Score = 77 (32.2 bits), Expect = 5.2e-06, Sum P(5) = 5.2e-06
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 508 FWLS---FNLHGEKL--HSNLSRMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNI 562
FW S F G L S R+ W F L++ +YTANL + LT + +N+
Sbjct: 743 FWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSP 802
Query: 563 ETL 565
E L
Sbjct: 803 EDL 805
Score = 43 (20.2 bits), Expect = 5.2e-06, Sum P(5) = 5.2e-06
Identities = 12/63 (19%), Positives = 29/63 (46%)
Query: 255 KLLRRILLSDFDGLTGKVEFMNQKVAPAHTYQIINL-MGKSYRELGFWTYGLGFSDTIID 313
K+ R + + +GLTG ++F + +T ++ + + + ++ W G ++
Sbjct: 425 KISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQP--LN 482
Query: 314 PKY 316
KY
Sbjct: 483 AKY 485
Score = 42 (19.8 bits), Expect = 5.2e-06, Sum P(5) = 5.2e-06
Identities = 53/273 (19%), Positives = 108/273 (39%)
Query: 6 SQKVEAILGPQTSEETSSVAEIASKKQIPVLSFADATPNWATER--WP---FLLQASQNQ 60
S+ V ++LG + + ++ ++ Q+P + TP W E+ P FL A +
Sbjct: 101 SRGVYSMLGAVSPDSFDTLHSYSNTFQMPFV-----TP-WFPEKVLTPSSGFLDFALSMR 154
Query: 61 LAQMKAIAAIVQSWEWHQVTVIYEDIDSSATGILPHLSDALREAGAEIIHVLALPHFPSS 120
+AI +Q + W ++ +Y+ D L + LR G E V + +
Sbjct: 155 PDYHQAIIDTIQFYGWRKIIYLYDSHDGLLR--LQQIYQGLRP-GNESFQVELVKRISNV 211
Query: 121 RLSEE----LEKLKGGQCRVFVVHLSLELAVH-LFEKANKMKMMEKDYIWITT-----DA 170
++ E LE++ + + V+ E+A L + +++ + Y ++ + D
Sbjct: 212 SMAIEFLHTLEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDR 271
Query: 171 FTSLVHSINTSSISSMQGILGVRSHFPEDKPKFQDFCKRFRKRFGAEYPEEDNNHEPGAL 230
+ S + +I+ + I+ + F D KR + E + A
Sbjct: 272 WESEIIEFGAINITGFR-IVDTNRRLVRE---FYDSWKRLDPQMSVGAGRESIS----AQ 323
Query: 231 AVQTYDAVWSVALA----MEQKSEKLNQKLLRR 259
A YDAV+ + A + +K ++ + RR
Sbjct: 324 AALMYDAVFVLVEAFNKILRKKPDQFRNNVQRR 356
>ZFIN|ZDB-GENE-040913-1 [details] [associations]
symbol:grid2 "glutamate receptor, ionotropic, delta
2" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-040913-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 EMBL:AB154207 IPI:IPI00487693
RefSeq:NP_001004123.1 UniGene:Dr.116180 ProteinModelPortal:Q68Y21
SMR:Q68Y21 STRING:Q68Y21 GeneID:448841 KEGG:dre:448841 CTD:2895
InParanoid:Q68Y21 KO:K05207 OrthoDB:EOG4SBDX4 NextBio:20832541
Uniprot:Q68Y21
Length = 1009
Score = 148 (57.2 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 59/223 (26%), Positives = 106/223 (47%)
Query: 360 QQYVNVEYDELRNFTYFGGFSIELFKALVEKLPF----YL-P---YNFIPFNGSYDDLVK 411
+ +V V + L + GFSI++ AL L F Y+ P Y +G+++ L+
Sbjct: 451 EPFVMVSENVLGKPKKYQGFSIDVLDALANYLGFKYEIYVAPDHKYGSQQADGTWNGLIG 510
Query: 412 QLYLNNFAGVVGDVAIVARRCQYADFTHPYTESGLVMIFPVQKSGNKTLLF--LKPFTRA 469
+L + + I R DFT Y + + ++ ++K+ +F L PF +
Sbjct: 511 ELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVL--LRKAERTVDMFACLAPFDLS 568
Query: 470 VWILVAVISIYNGFVVWLIERNHWPELT-GSA----LHQTGTFFWLSF-NLHGEKLHSNL 523
+W +A + G +V+L+ + P L GS L+ + F + SF GE ++ L
Sbjct: 569 LWACIAGTVLLVGTLVYLLNWLNPPRLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTL 628
Query: 524 S-RMTTLVWLFVALVISQTYTANLTSMLTARGLEPTVNNIETL 565
+ RM VW AL++ +YTANL + LT +E ++ +++ L
Sbjct: 629 ATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDL 671
Score = 45 (20.9 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/94 (23%), Positives = 39/94 (41%)
Query: 608 CKGFTVAGPTYKVGGLGFAFPKGSPLLPSVIEALLKVSESGKLRELETSMIASEK-C-ME 665
C +TV+ G G A GSP + +L++ ++G + L+ + C +
Sbjct: 756 CSLYTVSNNVAD-RGYGMAMQHGSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLY 814
Query: 666 VNLHDDDDISSLSPSGF-WVLFVLSGGISTIALV 698
+ S+L F V FVL+ G+ L+
Sbjct: 815 SPVGTRKSGSALDIHSFAGVFFVLAAGVVLSCLI 848
WARNING: HSPs involving 57 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 720 720 0.00085 121 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 307
No. of states in DFA: 629 (67 KB)
Total size of DFA: 398 KB (2192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.53u 0.21s 59.74t Elapsed: 00:00:06
Total cpu time: 59.67u 0.21s 59.88t Elapsed: 00:00:07
Start: Fri May 10 04:30:21 2013 End: Fri May 10 04:30:28 2013
WARNINGS ISSUED: 2