Query 043469
Match_columns 104
No_of_seqs 108 out of 1041
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:51:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gla_A Low molecular weight he 100.0 2.8E-32 9.7E-37 166.3 13.9 96 2-104 2-97 (100)
2 4fei_A Heat shock protein-rela 100.0 1.2E-30 4.1E-35 159.8 10.3 91 2-104 4-94 (102)
3 1gme_A Heat shock protein 16.9 100.0 7.4E-29 2.5E-33 161.3 12.4 95 3-104 42-137 (151)
4 4eld_A MJ16.5-P1, small heat s 100.0 2.5E-28 8.7E-33 160.1 13.6 94 3-104 56-150 (161)
5 3aab_A Putative uncharacterize 100.0 1E-27 3.5E-32 151.0 11.9 91 3-104 23-115 (123)
6 3l1e_A Alpha-crystallin A chai 99.9 1.8E-25 6E-30 137.7 13.5 86 5-104 3-89 (106)
7 3q9p_A Heat shock protein beta 99.9 1.3E-25 4.4E-30 133.4 11.0 82 9-104 2-84 (85)
8 2wj5_A Heat shock protein beta 99.9 1.2E-25 4.1E-30 137.3 10.8 85 6-104 3-88 (101)
9 2y1y_A Alpha-crystallin B chai 99.9 2.9E-24 1E-28 128.7 11.5 81 10-104 2-83 (90)
10 2klr_A Alpha-crystallin B chai 99.9 2.1E-23 7.3E-28 138.4 10.5 84 7-104 66-150 (175)
11 2bol_A TSP36, small heat shock 99.9 3.2E-23 1.1E-27 148.0 11.5 87 3-104 97-188 (314)
12 2bol_A TSP36, small heat shock 99.9 1.1E-22 3.6E-27 145.3 8.3 88 6-104 222-313 (314)
13 2xcm_C SGT1-like protein, cyto 99.4 2.9E-12 1E-16 76.0 7.6 79 4-104 2-80 (92)
14 1rl1_A Suppressor of G2 allele 99.4 3.3E-12 1.1E-16 78.8 8.1 80 3-104 8-87 (114)
15 2k8q_A Protein SHQ1; beta-sand 98.9 4.4E-09 1.5E-13 66.5 7.1 74 4-104 3-81 (134)
16 3eud_A Protein SHQ1; CS domain 98.9 8.5E-08 2.9E-12 58.9 11.2 74 4-104 17-95 (115)
17 3igf_A ALL4481 protein; two-do 98.8 2.7E-08 9.2E-13 72.5 8.4 69 5-102 298-367 (374)
18 1x5m_A Calcyclin-binding prote 98.6 2.1E-06 7.3E-11 53.6 11.2 79 4-104 20-102 (127)
19 1wh0_A Ubiquitin carboxyl-term 98.4 2.9E-06 9.8E-11 53.7 9.8 88 4-104 19-110 (134)
20 1wgv_A KIAA1068 protein; CS do 98.4 5.7E-06 2E-10 51.4 9.7 79 4-104 19-100 (124)
21 2o30_A Nuclear movement protei 98.4 5.2E-06 1.8E-10 52.1 9.3 76 3-104 3-79 (131)
22 1ejf_A Progesterone receptor P 98.3 8.2E-06 2.8E-10 50.8 9.0 78 4-104 2-80 (125)
23 3qor_A Nuclear migration prote 98.2 1.4E-05 4.6E-10 49.6 9.3 76 4-104 16-95 (121)
24 1wfi_A Nuclear distribution ge 98.2 7.8E-06 2.7E-10 51.2 7.9 76 4-104 7-86 (131)
25 2rh0_A NUDC domain-containing 98.2 1.2E-05 4.1E-10 52.0 8.8 75 4-104 13-89 (157)
26 2kmw_A Uncharacterized protein 98.1 1.1E-05 3.9E-10 51.8 6.2 78 2-104 2-80 (150)
27 2cg9_X CO-chaperone protein SB 98.0 2.9E-06 9.8E-11 53.6 2.8 84 3-104 5-96 (134)
28 3q9p_A Heat shock protein beta 88.4 1.1 3.8E-05 25.3 4.8 31 71-102 7-37 (85)
29 3gla_A Low molecular weight he 87.4 1.6 5.4E-05 25.1 5.1 34 14-47 64-98 (100)
30 2y1y_A Alpha-crystallin B chai 85.4 2 6.9E-05 24.3 4.8 31 71-102 6-36 (90)
31 4fei_A Heat shock protein-rela 84.9 2.4 8.3E-05 24.6 5.1 34 15-48 62-96 (102)
32 2wj5_A Heat shock protein beta 83.8 2.5 8.5E-05 24.6 4.8 30 71-101 11-40 (101)
33 3l1e_A Alpha-crystallin A chai 83.6 2.5 8.4E-05 24.8 4.7 30 71-101 12-41 (106)
34 4eld_A MJ16.5-P1, small heat s 80.8 3.5 0.00012 25.9 5.0 35 14-48 117-152 (161)
35 3aab_A Putative uncharacterize 75.4 6.3 0.00021 23.5 4.8 33 15-47 82-116 (123)
36 1rl1_A Suppressor of G2 allele 74.3 4.6 0.00016 23.7 3.9 34 13-46 53-87 (114)
37 1gme_A Heat shock protein 16.9 71.7 7.3 0.00025 24.2 4.5 35 14-48 104-139 (151)
38 2klr_A Alpha-crystallin B chai 70.7 6.3 0.00022 25.3 4.2 30 71-101 73-102 (175)
39 1n91_A ORF, hypothetical prote 69.2 12 0.00041 22.3 4.8 40 9-49 8-48 (108)
40 3qqz_A Putative uncharacterize 68.2 25 0.00085 23.7 8.2 68 16-99 13-85 (255)
41 1rl6_A Protein (ribosomal prot 62.9 22 0.00075 22.9 5.5 20 27-46 11-30 (177)
42 3rd4_A Uncharacterized protein 62.2 3.4 0.00012 24.4 1.4 25 11-35 33-57 (100)
43 1nkw_E 50S ribosomal protein L 61.6 27 0.00093 23.3 5.9 22 26-47 38-59 (212)
44 3v2d_H 50S ribosomal protein L 57.3 19 0.00066 23.2 4.6 20 27-46 12-31 (180)
45 1vq8_E 50S ribosomal protein L 56.1 37 0.0013 21.9 5.7 20 27-46 9-28 (178)
46 2cql_A OK/SW-CL.103, 60S ribos 53.7 15 0.0005 21.5 3.2 21 27-47 20-40 (100)
47 1ew4_A CYAY protein; friedreic 50.7 10 0.00035 22.4 2.2 17 87-103 29-45 (106)
48 1ulv_A Glucodextranase; GH fam 50.5 41 0.0014 27.5 6.2 92 6-104 810-914 (1020)
49 3iln_A Laminarinase; jelly ROW 47.9 38 0.0013 22.6 5.0 46 32-82 49-97 (251)
50 2o30_A Nuclear movement protei 46.5 45 0.0015 19.9 5.4 32 70-101 13-44 (131)
51 3oeq_A Frataxin homolog, mitoc 46.4 18 0.00061 22.1 2.9 16 88-103 49-64 (123)
52 2ks0_A Uncharacterized protein 46.3 13 0.00044 20.5 2.0 23 25-47 18-40 (71)
53 3jx8_A Putative lipoprotein; s 45.9 20 0.00068 23.9 3.4 40 7-46 34-73 (250)
54 2kgs_A Uncharacterized protein 44.4 17 0.00059 22.0 2.6 29 22-50 2-30 (132)
55 2zkr_e 60S ribosomal protein L 44.1 44 0.0015 21.8 4.7 28 20-47 6-33 (192)
56 4awd_A Beta-porphyranase; hydr 44.0 64 0.0022 22.7 5.8 55 26-82 85-145 (324)
57 1qys_A TOP7; alpha-beta, novel 43.5 26 0.0009 19.8 3.0 24 25-48 74-97 (106)
58 3u5e_H L8, RP24, YL11, 60S rib 42.8 67 0.0023 20.9 6.3 20 27-46 13-32 (191)
59 3e9t_A Na/Ca exchange protein; 40.7 29 0.00098 20.3 3.1 35 1-35 5-40 (114)
60 2rh0_A NUDC domain-containing 39.1 69 0.0024 19.9 6.1 33 69-101 21-53 (157)
61 2hyk_A Beta-1,3-glucanase; fam 38.9 31 0.0011 22.8 3.4 44 32-82 52-99 (245)
62 2gjh_A Designed protein; oblig 38.4 29 0.001 17.8 2.5 24 25-48 30-53 (62)
63 1nvp_C Transcription initiatio 36.9 17 0.00058 20.3 1.5 15 85-99 46-60 (76)
64 4atf_A Beta-agarase B; hydrola 36.5 56 0.0019 22.9 4.5 48 26-81 72-121 (308)
65 3t3l_A Frataxin, mitochondrial 35.6 27 0.00092 21.4 2.5 17 86-102 40-56 (129)
66 1wgv_A KIAA1068 protein; CS do 35.3 69 0.0024 18.8 5.3 32 70-101 28-60 (124)
67 2uwa_A Cellulase; glycoside hy 34.2 80 0.0027 21.5 5.0 43 26-82 31-74 (274)
68 2ayh_A 1,3-1,4-beta-D-glucan 4 34.1 61 0.0021 20.8 4.2 43 32-81 39-83 (214)
69 3lyc_A Putative pectinase; str 33.8 25 0.00085 23.2 2.3 38 8-45 29-66 (241)
70 3qor_A Nuclear migration prote 33.6 75 0.0026 18.7 5.5 34 69-102 24-59 (121)
71 3fso_A Integrin beta-4, GP150; 31.2 52 0.0018 19.5 3.2 34 2-35 9-43 (123)
72 3ead_A Na/Ca exchange protein; 30.8 54 0.0019 19.7 3.3 34 2-35 8-42 (137)
73 1nh2_C Transcription initiatio 30.7 25 0.00084 19.8 1.5 15 85-99 48-62 (79)
74 4a17_E RPL9, 60S ribosomal pro 29.5 52 0.0018 21.4 3.2 25 23-47 9-33 (188)
75 1o4z_A Beta-agarase B; glycosi 29.2 95 0.0032 21.9 4.8 48 27-82 104-153 (346)
76 3iz5_F 60S ribosomal protein L 29.0 54 0.0018 21.3 3.2 20 27-46 13-32 (190)
77 3pet_A Putative adhesin; right 28.0 36 0.0012 22.2 2.3 38 7-44 32-70 (221)
78 3bqa_A Sensor protein PHOQ; hi 27.4 17 0.00059 22.8 0.6 14 90-103 21-34 (148)
79 3r8s_G 50S ribosomal protein L 26.9 41 0.0014 21.6 2.3 19 27-45 11-29 (176)
80 2vy0_A Endo-beta-1,3-glucanase 25.6 1.2E+02 0.0042 20.1 4.7 51 32-82 59-113 (264)
81 3j21_F 50S ribosomal protein L 24.4 45 0.0015 21.6 2.2 20 27-46 14-33 (184)
82 1ip9_A BEM1 protein; ubiquitin 24.1 36 0.0012 19.4 1.4 23 81-103 8-30 (85)
83 1jrm_A MTH0637, conserved hypo 23.5 1E+02 0.0034 18.0 3.4 40 9-49 7-49 (104)
84 4ate_A Beta-porphyranase A; hy 23.4 1.7E+02 0.0058 19.8 5.1 52 27-80 55-111 (266)
85 1dyp_A Kappa-carrageenase; hyd 23.2 1.7E+02 0.0058 19.4 5.7 20 26-47 44-63 (271)
86 4asm_B Beta-agarase D; hydrola 22.3 1.3E+02 0.0044 21.7 4.4 20 26-47 80-99 (363)
87 3o5s_A Beta-glucanase; glycosy 21.4 1.4E+02 0.0048 19.8 4.2 43 32-81 63-107 (238)
88 3juu_A Porphyranase B; glycosi 21.3 1.4E+02 0.0049 20.3 4.4 54 27-82 64-119 (280)
89 2qvk_A CBD2, sodium/calcium ex 21.1 1.2E+02 0.0039 19.8 3.7 33 2-34 9-42 (192)
90 2c3v_A Alpha-amylase G-6; carb 21.1 92 0.0032 18.1 2.9 23 70-95 48-70 (102)
91 1o4y_A Beta-agarase A; glycosi 20.9 1.7E+02 0.0058 19.8 4.7 46 26-80 66-113 (288)
92 3ljy_A Putative adhesin; struc 20.8 97 0.0033 20.4 3.4 27 18-44 44-70 (243)
No 1
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=100.00 E-value=2.8e-32 Score=166.28 Aligned_cols=96 Identities=28% Similarity=0.542 Sum_probs=91.4
Q ss_pred cccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 2 EWSPRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 2 ~~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
+|.|+++|.+++++|+|.++|||+++++|+|++.++.|+|+|++.... ......++++|+..|.|+|+|.||.
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~-------~~~~~~~~~~er~~g~f~r~~~LP~ 74 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSES-------STETERFSRIERRYGSFHRRFALPD 74 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGG-------GSSGGGEEEECCCCEEEEEEEECCT
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcC-------ccCCccEEEEeecceEEEEEEECCC
Confidence 699999999999999999999999999999999999999999998775 4566889999999999999999999
Q ss_pred CcccCceeEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
++|.+.|+|+|+||+|+|++||.
T Consensus 75 ~vd~~~i~A~~~~GvL~I~~pK~ 97 (100)
T 3gla_A 75 SADADGITAAGRNGVLEIRIPKR 97 (100)
T ss_dssp TBCTTSCEEEEETTEEEEEEEBC
T ss_pred CcChHHeEEEEeCCEEEEEEecC
Confidence 99999999999999999999995
No 2
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.97 E-value=1.2e-30 Score=159.82 Aligned_cols=91 Identities=21% Similarity=0.387 Sum_probs=85.1
Q ss_pred cccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 2 EWSPRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 2 ~~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
.|.|+++|.+++++|+|.++|||+++++|+|++.++.|+|+|++... .+++++|+..|.|+|+|.||.
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~------------~~~~~~er~~g~f~R~~~LP~ 71 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGT------------EHLLRSERPSGRFVRELAFPE 71 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCC------------SSCSSCCSEEEEEEEEEECSS
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecC------------CCEEEEEEeccEEEEEEECCC
Confidence 59999999999999999999999999999999999999999998421 467778889999999999999
Q ss_pred CcccCceeEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
++|.+.++|+|+||+|+|++||+
T Consensus 72 ~vd~~~i~A~~~~GvL~I~lpK~ 94 (102)
T 4fei_A 72 PVRPASGVASLAGGVLTVRFEKL 94 (102)
T ss_dssp CBCTTCCEEEEETTEEEEEEEBS
T ss_pred CcchhHcEEEEECCEEEEEEEcc
Confidence 99999999999999999999995
No 3
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.96 E-value=7.4e-29 Score=161.29 Aligned_cols=95 Identities=25% Similarity=0.427 Sum_probs=88.8
Q ss_pred ccceeeEEEcCCEEEEEEEcCCCCCCCeEEEE-eCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 3 WSPRMNVSELGSNYVMTVEIPGVHVNDIRVEV-DDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 3 ~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v-~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
|.|+++|.|++++|+|.++|||+++++|+|++ +++.|+|+|++.... ..+...++++|+..|.|+|+|.||.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~-------~~~~~~~~~~Er~~g~F~R~~~LP~ 114 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEK-------EDKNDKWHRVERSSGKFVRRFRLLE 114 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCC-------CCTTCEEEECCCCCCCEEEEEECSS
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEcccc-------ccCCceEEEEeEeccEEEEEEECCC
Confidence 78999999999999999999999999999999 578999999988765 4556889999999999999999999
Q ss_pred CcccCceeEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
++|.+.|+|+|+||+|+|++||.
T Consensus 115 ~vd~~~i~A~~~nGvL~I~lPK~ 137 (151)
T 1gme_A 115 DAKVEEVKAGLENGVLTVTVPKA 137 (151)
T ss_dssp CCCGGGCEEEEETTEEEEEEECC
T ss_pred CccccceEEEEECCEEEEEEEcc
Confidence 99999999999999999999995
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.96 E-value=2.5e-28 Score=160.10 Aligned_cols=94 Identities=27% Similarity=0.355 Sum_probs=87.1
Q ss_pred ccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeee-ccccEEEEEECCC
Q 043469 3 WSPRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREY-GGEPYQIVWTLPT 81 (104)
Q Consensus 3 ~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~-~~~~f~r~~~lP~ 81 (104)
|.| ++|.|++++|+|+++|||++++||+|++.++.|+|+|++.... ..+...++++|+ ..|.|+|+|.||.
T Consensus 56 ~~p-vdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~-------~~~~~~~~~~Er~~~g~f~R~~~LP~ 127 (161)
T 4eld_A 56 FMP-ISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLM-------ITESERIIYSEIPEEEEIYRTIKLPA 127 (161)
T ss_dssp CCC-EEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCC-------CCSSCEEEEECSCCCCEEEEEEECSS
T ss_pred ccc-eeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccc-------cCCCceEEEEEeeccccEEEEEECCC
Confidence 455 9999999999999999999999999999999999999998764 345567999999 9999999999999
Q ss_pred CcccCceeEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
++|.+.|+|+|+||+|+|++||+
T Consensus 128 ~vd~~~i~A~~~nGvL~I~lpK~ 150 (161)
T 4eld_A 128 TVKEENASAKFENGVLSVILPKA 150 (161)
T ss_dssp CBCGGGCEEEEETTEEEEEEEBC
T ss_pred CcccccEEEEEECCEEEEEEEcC
Confidence 99999999999999999999995
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.95 E-value=1e-27 Score=151.04 Aligned_cols=91 Identities=25% Similarity=0.339 Sum_probs=85.2
Q ss_pred ccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeC-CEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 3 WSPRMNVSELGSNYVMTVEIPGVHVNDIRVEVDD-RKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 3 ~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~-~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
|.|+++|.+++++|+|.++|||+++++|+|++.+ +.|+|+|++... . +.+++++|+.. .|+|+|.||.
T Consensus 23 ~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~--------~--~~~~~~~Er~~-~f~R~~~LP~ 91 (123)
T 3aab_A 23 VYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREIT--------E--PGVKYLTQRPK-YVRKVIRLPY 91 (123)
T ss_dssp HCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCC--------C--CSCEEEECSCS-EEEEEEECSS
T ss_pred CCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEecc--------C--CCeEEEEEEeE-EEEEEEECCC
Confidence 5699999999999999999999999999999999 999999998654 2 57889999999 9999999999
Q ss_pred CcccCce-eEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTI-SAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i-~A~~~~GiL~I~~pK~ 104 (104)
++|.++| +|+|+||+|+|++||.
T Consensus 92 ~vd~~~i~~A~~~~GvL~I~lPK~ 115 (123)
T 3aab_A 92 NVAKDAEISGKYENGVLTIRIPIA 115 (123)
T ss_dssp EECTTCCCEEEEETTEEEEEEEGG
T ss_pred CcCcchhCeeEEcCCEEEEEEEcC
Confidence 9999999 9999999999999984
No 6
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.94 E-value=1.8e-25 Score=137.71 Aligned_cols=86 Identities=22% Similarity=0.413 Sum_probs=76.0
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCcc
Q 043469 5 PRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVD 84 (104)
Q Consensus 5 P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd 84 (104)
+..+|++++++|+|.++|||++++||+|++.++.|+|+|++.... +...++++ .|+|+|.||.++|
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~---------~~~~~~~~-----eF~R~~~LP~~vd 68 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQ---------DDHGYISR-----EFHRRYRLPSNVD 68 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEE---------TTTEEEEE-----EEEEEEECCTTBC
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEcccc---------CCCCEEEE-----EEEEEEECCCCcC
Confidence 567999999999999999999999999999999999999976543 12345443 4999999999999
Q ss_pred cCceeEEE-eCcEEEEEEeCC
Q 043469 85 KDTISAEF-LNGLLQIIIPKL 104 (104)
Q Consensus 85 ~~~i~A~~-~~GiL~I~~pK~ 104 (104)
.+.|+|+| +||+|+|++||+
T Consensus 69 ~~~i~A~~s~~GvL~I~~PK~ 89 (106)
T 3l1e_A 69 QSALSCSLSADGMLTFSGPKI 89 (106)
T ss_dssp TTSCEEEECTTSEEEEEEEBC
T ss_pred hhHcEEEECCCCEEEEEEEcc
Confidence 99999999 899999999995
No 7
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.93 E-value=1.3e-25 Score=133.39 Aligned_cols=82 Identities=18% Similarity=0.349 Sum_probs=69.8
Q ss_pred EEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCcccCce
Q 043469 9 VSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVDKDTI 88 (104)
Q Consensus 9 i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i 88 (104)
++|++++|.|.++|||++++||+|++.++.|+|+|++.... .. .. ...+.|+|+|.||.++|.+.|
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~-------~~--~~-----~~~~~F~R~~~LP~~vd~~~i 67 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQ-------DE--HG-----YISRCFTRKYTLPPGVDPTQV 67 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC---------------------CCCEEEEEEEECCTTCCGGGC
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEcccc-------CC--CC-----EEEEEEEEEEECCCCcChHHc
Confidence 46899999999999999999999999999999999987653 11 11 246789999999999999999
Q ss_pred eEEEe-CcEEEEEEeCC
Q 043469 89 SAEFL-NGLLQIIIPKL 104 (104)
Q Consensus 89 ~A~~~-~GiL~I~~pK~ 104 (104)
+|+|. ||+|+|++||.
T Consensus 68 ~A~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 68 SSSLSPEGTLTVEAPMP 84 (85)
T ss_dssp EEEECTTSEEEEEEECC
T ss_pred EEEECCCCEEEEEEEcC
Confidence 99998 99999999994
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.93 E-value=1.2e-25 Score=137.34 Aligned_cols=85 Identities=19% Similarity=0.321 Sum_probs=75.9
Q ss_pred eeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCccc
Q 043469 6 RMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVDK 85 (104)
Q Consensus 6 ~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~ 85 (104)
.++|++++++|+|.++|||++++||+|++.++.|+|+|++.... +...+++++ |+|+|.||.++|.
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~---------~~~~~~~~e-----F~R~~~LP~~vd~ 68 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERP---------DEHGFIARE-----FHRRYRLPPGVDP 68 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECS---------STTCCEEEE-----EEEEEECCTTBCT
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEeccc---------CCCCEEEEE-----EEEEEECCCCcCh
Confidence 57999999999999999999999999999999999999997542 234455543 9999999999999
Q ss_pred CceeEEE-eCcEEEEEEeCC
Q 043469 86 DTISAEF-LNGLLQIIIPKL 104 (104)
Q Consensus 86 ~~i~A~~-~~GiL~I~~pK~ 104 (104)
+.|+|+| +||+|+|++||.
T Consensus 69 ~~i~A~~s~nGvL~I~lPK~ 88 (101)
T 2wj5_A 69 AAVTSALSPEGVLSIQATPA 88 (101)
T ss_dssp TCCEEEECTTSEEEEEECBC
T ss_pred hHCEEEECCCCEEEEEEECC
Confidence 9999999 899999999985
No 9
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.92 E-value=2.9e-24 Score=128.66 Aligned_cols=81 Identities=17% Similarity=0.351 Sum_probs=68.6
Q ss_pred EEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCcccCcee
Q 043469 10 SELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVDKDTIS 89 (104)
Q Consensus 10 ~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~ 89 (104)
.+++++|+|.++|||++++||+|++.++.|+|+|++.... +...++++ .|+|+|.||.++|.+.|+
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~---------~~~~~~~~-----ef~R~~~LP~~vd~~~i~ 67 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQ---------DEHGFISR-----EFHRKYRIPADVDPLTIT 67 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEE---------CSSSEEEE-----EEEEEEECCTTBCGGGCE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEeccc---------CCCCEEEE-----EEEEEEECCCCcChhHcE
Confidence 3678999999999999999999999999999999987542 23455544 399999999999999999
Q ss_pred EEE-eCcEEEEEEeCC
Q 043469 90 AEF-LNGLLQIIIPKL 104 (104)
Q Consensus 90 A~~-~~GiL~I~~pK~ 104 (104)
|+| +||+|+|++||.
T Consensus 68 A~~~~~GvL~I~~pK~ 83 (90)
T 2y1y_A 68 SSMSSDGVLTVNGPRK 83 (90)
T ss_dssp EEECTTSEEEEEECBC
T ss_pred EEECCCCEEEEEEEcC
Confidence 999 899999999985
No 10
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.90 E-value=2.1e-23 Score=138.37 Aligned_cols=84 Identities=17% Similarity=0.336 Sum_probs=72.4
Q ss_pred eeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCcccC
Q 043469 7 MNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVDKD 86 (104)
Q Consensus 7 ~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~ 86 (104)
++|.+++++|+|.++|||++++||+|++.++.|+|+|++.... ++.+++++ .|+|+|.||.++|.+
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~---------~~~~~~~r-----eF~R~~~LP~~Vd~~ 131 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQ---------DEHGFISR-----EFHRKYRIPADVDPL 131 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEE---------ETTEEEEE-----EEEEEEECTTTCCTT
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccc---------cCCceEEE-----EEEEEEECCCCcChh
Confidence 6899999999999999999999999999999999999986543 12455554 399999999999999
Q ss_pred ceeEEE-eCcEEEEEEeCC
Q 043469 87 TISAEF-LNGLLQIIIPKL 104 (104)
Q Consensus 87 ~i~A~~-~~GiL~I~~pK~ 104 (104)
+|+|+| +||+|+|++||+
T Consensus 132 ~i~A~~s~dGvL~I~lPK~ 150 (175)
T 2klr_A 132 TITSSLSSDGVLTVNGPRK 150 (175)
T ss_dssp TCEEEECTTSCEEEEEECC
T ss_pred HeEEEEcCCCEEEEEEECC
Confidence 999999 799999999995
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.90 E-value=3.2e-23 Score=148.04 Aligned_cols=87 Identities=24% Similarity=0.362 Sum_probs=79.5
Q ss_pred ccceeeEEEcCC----EEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEE
Q 043469 3 WSPRMNVSELGS----NYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWT 78 (104)
Q Consensus 3 ~~P~~~i~e~~~----~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~ 78 (104)
|.|+++++|+++ +|+|+++|||+++++|+|++.++.|+|+|++.... . . .+..|.|+|+|.
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~--------e-~------~r~~g~F~R~~~ 161 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVAC--------G-D------AAMSESVGRSIP 161 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSST--------T-C------CCBCCCEEEEEE
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccC--------C-C------CEEEEEEEEEEE
Confidence 679999999999 99999999999999999999999999999987432 1 1 157899999999
Q ss_pred CCCCcccCceeEEEe-CcEEEEEEeCC
Q 043469 79 LPTNVDKDTISAEFL-NGLLQIIIPKL 104 (104)
Q Consensus 79 lP~~vd~~~i~A~~~-~GiL~I~~pK~ 104 (104)
||.+||.+.|+|+|+ ||+|+|++||.
T Consensus 162 LP~~Vd~e~i~A~~~~nGVL~I~lPK~ 188 (314)
T 2bol_A 162 LPPSVDRNHIQATITTDDVLVIEAPVN 188 (314)
T ss_dssp CCTTBCGGGCEEEECSSSEEEEEEEBS
T ss_pred CCCCccccccEEEEeCCCEEEEEEecc
Confidence 999999999999999 99999999984
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.88 E-value=1.1e-22 Score=145.34 Aligned_cols=88 Identities=16% Similarity=0.274 Sum_probs=70.1
Q ss_pred eeeEEEcC---CEEEEEEEc-CCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 6 RMNVSELG---SNYVMTVEI-PGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 6 ~~~i~e~~---~~~~i~v~l-PG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
.++|.+++ +.|.|.++| ||++++||+|++.++.|+|+|+++... + .++++|+++|.|+|+|.||+
T Consensus 222 ~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~-------~----~~~~~Er~~g~F~R~~~LP~ 290 (314)
T 2bol_A 222 GLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEE-------K----TENASHSEHREFYKAFVTPE 290 (314)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC-----------------------CEEEEEEEECSS
T ss_pred CCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccC-------C----ceEEEEEeeeEEEEEEECCC
Confidence 35666554 489999999 999999999999999999999987653 1 46888999999999999999
Q ss_pred CcccCceeEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
+||.++|+|+|+||+|+|++||+
T Consensus 291 ~vd~~~i~A~~~dGvL~i~~Pk~ 313 (314)
T 2bol_A 291 VVDASKTQAEIVDGLMVVEAPLF 313 (314)
T ss_dssp EECGGGCEEEEETTEEEEEEEEE
T ss_pred CcChHHeEEEEeCCEEEEEEecC
Confidence 99999999999999999999984
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.36 E-value=2.9e-12 Score=75.99 Aligned_cols=79 Identities=18% Similarity=0.229 Sum_probs=70.1
Q ss_pred cceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCc
Q 043469 4 SPRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNV 83 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~v 83 (104)
.|+++|+++++.+.|++.+||+.++++.|.+.++.|.|++.... ...|...+.|+..|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~----------------------~~~y~~~~~L~~~I 59 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPG----------------------EDAYYLQPRLFGKI 59 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTT----------------------SCCEEECCBBSSCB
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCC----------------------CcEEEEeeEcCCcc
Confidence 47899999999999999999999999999999999999865421 12577788999999
Q ss_pred ccCceeEEEeCcEEEEEEeCC
Q 043469 84 DKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 84 d~~~i~A~~~~GiL~I~~pK~ 104 (104)
+++..++++.+|.|.|+|+|+
T Consensus 60 ~~~~s~~~~~~~~l~i~L~K~ 80 (92)
T 2xcm_C 60 IPDKCKYEVLSTKIEICLAKA 80 (92)
T ss_dssp CGGGCEEEECSSCEEEEEEBS
T ss_pred CchhEEEEEECCEEEEEEEcC
Confidence 999999999999999999985
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.36 E-value=3.3e-12 Score=78.75 Aligned_cols=80 Identities=23% Similarity=0.329 Sum_probs=70.7
Q ss_pred ccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCC
Q 043469 3 WSPRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTN 82 (104)
Q Consensus 3 ~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~ 82 (104)
..|+++|+++++.+.|++.+||+.++++.|.+.++.|.|++.... ...|...+.|+..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~----------------------~~~y~~~~~L~~~ 65 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPS----------------------GEDYNLKLELLHP 65 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTT----------------------SSEEEEEECBSSC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCC----------------------CcEEEEEeeCCCc
Confidence 357799999999999999999999999999999999999875421 1247778999999
Q ss_pred cccCceeEEEeCcEEEEEEeCC
Q 043469 83 VDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 83 vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
|+++..++++.+|.|.|+|+|+
T Consensus 66 I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 66 IIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp CCGGGEEEEECSSSEEEEEECS
T ss_pred CCccccEEEEECCEEEEEEEcC
Confidence 9999999999999999999985
No 15
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.91 E-value=4.4e-09 Score=66.49 Aligned_cols=74 Identities=14% Similarity=0.371 Sum_probs=65.8
Q ss_pred cceeeEEEcCCEEEEEEEcCCCC--CCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 4 SPRMNVSELGSNYVMTVEIPGVH--VNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lPG~~--~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
.|.+.+.++++..+|.+.+|... ..++++.+++..+.+. ...|.-++.||.
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~---------------------------~~PYyLRL~LP~ 55 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH---------------------------LSPYYLRLRFPH 55 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEEC---------------------------SSSSCEEECCSS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEe---------------------------cCCeEEEecCCC
Confidence 58999999999999999999998 8999999999999886 234556799998
Q ss_pred Cc-ccCceeEEEe--CcEEEEEEeCC
Q 043469 82 NV-DKDTISAEFL--NGLLQIIIPKL 104 (104)
Q Consensus 82 ~v-d~~~i~A~~~--~GiL~I~~pK~ 104 (104)
.+ +.+..+|+|+ .|.|+|+|||.
T Consensus 56 ~V~e~~~~kA~YD~d~~~~~VtLpK~ 81 (134)
T 2k8q_A 56 ELIDDERSTAQYDSKDECINVKVAKL 81 (134)
T ss_dssp CEECCSSCEEEEETTTTEEEEEEEES
T ss_pred eeecCCCcceeEeccCCEEEEEEeCC
Confidence 88 8888999995 99999999994
No 16
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.86 E-value=8.5e-08 Score=58.92 Aligned_cols=74 Identities=14% Similarity=0.371 Sum_probs=64.2
Q ss_pred cceeeEEEcCCEEEEEEEcCCCC--CCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 4 SPRMNVSELGSNYVMTVEIPGVH--VNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lPG~~--~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
.|.+.+.++++..+|.+.+|-+. ..++++.++++.+... ...|--++.||.
T Consensus 17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~---------------------------~~PYyLRL~lP~ 69 (115)
T 3eud_A 17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFH---------------------------LSPYYLRLRFPH 69 (115)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEE---------------------------ETTEEEEEECSS
T ss_pred CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEe---------------------------cCCeEEEEecCc
Confidence 58999999999999999999876 7899999999999886 234566799997
Q ss_pred Cc-ccCceeEEEe--CcEEEEEEeCC
Q 043469 82 NV-DKDTISAEFL--NGLLQIIIPKL 104 (104)
Q Consensus 82 ~v-d~~~i~A~~~--~GiL~I~~pK~ 104 (104)
.+ +.+.-+|+|+ +|.++|++||.
T Consensus 70 ~vved~~~~A~YD~d~g~~~v~lpK~ 95 (115)
T 3eud_A 70 ELIDDERSTAQYDSKDECINVKVAKL 95 (115)
T ss_dssp CEECSTTCEEEEETTTTEEEEEEEES
T ss_pred ceecCCCcceEEeCCCcEEEEEEcCC
Confidence 77 6677899995 99999999995
No 17
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=98.78 E-value=2.7e-08 Score=72.47 Aligned_cols=69 Identities=17% Similarity=0.235 Sum_probs=60.1
Q ss_pred ceeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCcc
Q 043469 5 PRMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVD 84 (104)
Q Consensus 5 P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd 84 (104)
+++.|... .|.+++.|||+++++|++.-.++.|+|+ .|.|+|.+.||..+.
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gdeL~v~---------------------------~g~~rR~i~LP~~L~ 348 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYGPEVTVE---------------------------AGDQRRNIFLPPALS 348 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEETTEEEEE---------------------------ETTEEEEEECCTTTT
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEECCeEEEE---------------------------ECCEeecccCCHHHc
Confidence 34555444 7999999999999999999999999997 678999999998888
Q ss_pred cCc-eeEEEeCcEEEEEEe
Q 043469 85 KDT-ISAEFLNGLLQIIIP 102 (104)
Q Consensus 85 ~~~-i~A~~~~GiL~I~~p 102 (104)
-.. ..|.|+||.|+|++-
T Consensus 349 ~~~v~~A~~~~~~L~i~~~ 367 (374)
T 3igf_A 349 GRPITGAKFQNNYLIISFL 367 (374)
T ss_dssp TCCEEEEEEETTEEEEEEC
T ss_pred CCCccccEEECCEEEEEEe
Confidence 776 459999999999874
No 18
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=2.1e-06 Score=53.57 Aligned_cols=79 Identities=14% Similarity=0.270 Sum_probs=66.3
Q ss_pred cceeeEEEcCCEEEEEEEcCCC---CCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEE-C
Q 043469 4 SPRMNVSELGSNYVMTVEIPGV---HVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWT-L 79 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lPG~---~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~-l 79 (104)
.+.++|.++.+...|.+.+||+ .++++.|.+..+.|.|.+.... ...|.-.+. |
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~----------------------~~~y~~~~~~L 77 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN----------------------GKSYSMIVNNL 77 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS----------------------SSCEEEEEECB
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC----------------------CCcEEEEhHHh
Confidence 3578999999999999999998 8999999999999999863211 113566775 9
Q ss_pred CCCcccCceeEEEeCcEEEEEEeCC
Q 043469 80 PTNVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 80 P~~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
-..|+++.-+....++.+.|+|-|+
T Consensus 78 ~~~I~~e~S~~~v~~~kVei~L~K~ 102 (127)
T 1x5m_A 78 LKPISVEGSSKKVKTDTVLILCRKK 102 (127)
T ss_dssp SSCCCTTTCEEEEETTEEEEEEECS
T ss_pred cCccCcccCEEEEeCCEEEEEEEEC
Confidence 9999999988899999999999884
No 19
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.45 E-value=2.9e-06 Score=53.66 Aligned_cols=88 Identities=14% Similarity=0.155 Sum_probs=68.4
Q ss_pred cceeeEEEc-CCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccc---cEEEEEEC
Q 043469 4 SPRMNVSEL-GSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGE---PYQIVWTL 79 (104)
Q Consensus 4 ~P~~~i~e~-~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~f~r~~~l 79 (104)
.|.++|+++ .+...|++.++++.++++.|.+..+.|.|+........ .+.-...| .|.-.+.|
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~-------------l~~~~a~g~~~~y~~~~~L 85 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNF-------------LRLHPGCGPHTTFRWQVKL 85 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHH-------------HHHSTTCCTTSCEEEEEEB
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcc-------------cccccccCcceeEEEeccc
Confidence 367999999 99999999999999999999999999999865432100 00000011 46667889
Q ss_pred CCCcccCceeEEEeCcEEEEEEeCC
Q 043469 80 PTNVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 80 P~~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
-..|+++.-+.++.++.+.|+|.|+
T Consensus 86 ~~~I~pe~S~~~v~~~kIeI~L~K~ 110 (134)
T 1wh0_A 86 RNLIEPEQCTFCFTASRIDICLRKR 110 (134)
T ss_dssp SSCEEEEEEEEEECSSEEEEEEEES
T ss_pred cccCCchhCEEEEeCCEEEEEEEEC
Confidence 9999999888888899999999884
No 20
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=98.37 E-value=5.7e-06 Score=51.39 Aligned_cols=79 Identities=11% Similarity=0.134 Sum_probs=64.1
Q ss_pred cceeeEEEcCCEEEEEEEcC-CC-CCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 4 SPRMNVSELGSNYVMTVEIP-GV-HVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lP-G~-~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
.|.+.|.++.+...|++.|| |+ +.+++.|.+..+.|.|.+...... .+.-...|..
T Consensus 19 ~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~----------------------~~~~~~~L~~ 76 (124)
T 1wgv_A 19 RENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGE----------------------RVLMEGKLTH 76 (124)
T ss_dssp CSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSE----------------------EEEEEEEBSS
T ss_pred CCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCC----------------------ceEEcccccC
Confidence 47899999999999999998 77 899999999999999986431110 1123467999
Q ss_pred CcccCceeEEEeCcE-EEEEEeCC
Q 043469 82 NVDKDTISAEFLNGL-LQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~Gi-L~I~~pK~ 104 (104)
.|+++.-+..+.++. |.|+|-|+
T Consensus 77 ~I~~e~S~w~i~~~k~v~i~L~K~ 100 (124)
T 1wgv_A 77 KINTESSLWSLEPGKCVLVNLSKV 100 (124)
T ss_dssp CBCTTTCEEEECTTSEEEEEECBS
T ss_pred cCCCcCCEEEEeCCCEEEEEEEEC
Confidence 999999999998875 99999874
No 21
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=98.35 E-value=5.2e-06 Score=52.09 Aligned_cols=76 Identities=11% Similarity=0.096 Sum_probs=61.0
Q ss_pred ccceeeEEEcCCEEEEEEEcC-CCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCC
Q 043469 3 WSPRMNVSELGSNYVMTVEIP-GVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPT 81 (104)
Q Consensus 3 ~~P~~~i~e~~~~~~i~v~lP-G~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~ 81 (104)
-.|.+.|.++.+...|++.|| |++.+++.|.+..+.|.|.+... . .-...|..
T Consensus 3 ~~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g~-------------------------~-~~~~~L~~ 56 (131)
T 2o30_A 3 SEAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQGE-------------------------I-VIDGELLH 56 (131)
T ss_dssp --CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEETTE-------------------------E-EEEEEBSS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEECCE-------------------------e-eEcccccc
Confidence 358899999999999999996 89999999999999999984210 0 11357899
Q ss_pred CcccCceeEEEeCcEEEEEEeCC
Q 043469 82 NVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 82 ~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
.|+++.-+..+.++.|.|+|-|+
T Consensus 57 ~I~~e~S~w~i~~~kv~i~L~K~ 79 (131)
T 2o30_A 57 EVDVSSLWWVINGDVVDVNVTKK 79 (131)
T ss_dssp CEEEEEEEEEEETTEEEEEEEES
T ss_pred ccccccCEEEEeCCEEEEEEEEC
Confidence 99999989999999999999874
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=98.29 E-value=8.2e-06 Score=50.78 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=65.1
Q ss_pred cc-eeeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCC
Q 043469 4 SP-RMNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTN 82 (104)
Q Consensus 4 ~P-~~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~ 82 (104)
.| .+.++++.+...|++.+|+. +++.|.+..+.|.+++..... ...|.-.+.|-..
T Consensus 2 ~P~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~---------------------~~~y~~~l~L~~~ 58 (125)
T 1ejf_A 2 QPASAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSD---------------------NFKHLNEIDLFHC 58 (125)
T ss_dssp BCCCEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTT---------------------TEEEEEEEEBSSC
T ss_pred CCCceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCC---------------------CceEEEEEEccce
Confidence 36 79999999999999999995 799999999999998764211 1136667889999
Q ss_pred cccCceeEEEeCcEEEEEEeCC
Q 043469 83 VDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 83 vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
|+++..+.+..++.+.|+|.|+
T Consensus 59 I~~e~S~~~v~~~kiei~L~K~ 80 (125)
T 1ejf_A 59 IDPNDSKHKRTDRSILCCLRKG 80 (125)
T ss_dssp EEEEEEEEEECSSCEEEEEEES
T ss_pred eccccCEEEECCCEEEEEEEEC
Confidence 9999999898888999999874
No 23
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=98.25 E-value=1.4e-05 Score=49.56 Aligned_cols=76 Identities=20% Similarity=0.203 Sum_probs=62.3
Q ss_pred cceeeEEEcCCEEEEEEEcC-C--CCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECC
Q 043469 4 SPRMNVSELGSNYVMTVEIP-G--VHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLP 80 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lP-G--~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP 80 (104)
.|.+.|.++.+...|++.|| | ++.+++.|.+..+.|.|...... +.-...|.
T Consensus 16 ~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~-------------------------~~~~g~L~ 70 (121)
T 3qor_A 16 LPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQP-------------------------AIIDGELY 70 (121)
T ss_dssp CSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETTSC-------------------------CSEEEEBS
T ss_pred CCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEcCcc-------------------------eEEecccc
Confidence 47799999999999999998 4 78999999999999998642110 11135799
Q ss_pred CCcccCceeEEEeCc-EEEEEEeCC
Q 043469 81 TNVDKDTISAEFLNG-LLQIIIPKL 104 (104)
Q Consensus 81 ~~vd~~~i~A~~~~G-iL~I~~pK~ 104 (104)
..|+++.-+..+++| .|.|+|-|+
T Consensus 71 ~~I~~deS~w~i~~~~~i~i~L~K~ 95 (121)
T 3qor_A 71 NEVKVEESSWLIADGAVVTVHLEKI 95 (121)
T ss_dssp SCBCGGGCEEEEETTTEEEEEEEBS
T ss_pred ccccccccEEEEcCCCEEEEEEEEC
Confidence 999999999999998 999999874
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=98.22 E-value=7.8e-06 Score=51.20 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=62.5
Q ss_pred cceeeEEEcCCEEEEEEEcC-C--CCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECC
Q 043469 4 SPRMNVSELGSNYVMTVEIP-G--VHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLP 80 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lP-G--~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP 80 (104)
.|.+.|.++.+...|++.|| | ++.+++.|.+..+.|.|........ + ...|.
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~kg~~~~-----------------------~--~~~L~ 61 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQPPV-----------------------V--DGELY 61 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTSCCS-----------------------B--CSCBS
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEECCceEE-----------------------E--ecccc
Confidence 47899999999999999999 6 8999999999999999985311000 1 23688
Q ss_pred CCcccCceeEEEeCc-EEEEEEeCC
Q 043469 81 TNVDKDTISAEFLNG-LLQIIIPKL 104 (104)
Q Consensus 81 ~~vd~~~i~A~~~~G-iL~I~~pK~ 104 (104)
..|+++.-+..+.+| .|.|+|-|+
T Consensus 62 ~~I~~e~s~w~i~~~k~v~i~L~K~ 86 (131)
T 1wfi_A 62 NEVKVEESSWLIEDGKVVTVHLEKI 86 (131)
T ss_dssp SCBCSTTCEEEEETTTEEEEEEEBS
T ss_pred cccccccCEEEEcCCCEEEEEEEEC
Confidence 899999999999988 899999874
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=98.21 E-value=1.2e-05 Score=52.01 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=62.7
Q ss_pred cceeeEEEcCCEEEEEEEcC-CCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCC
Q 043469 4 SPRMNVSELGSNYVMTVEIP-GVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTN 82 (104)
Q Consensus 4 ~P~~~i~e~~~~~~i~v~lP-G~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~ 82 (104)
.|.+.|.++.+...|+|.|| |++.+++.|.++.+.|.|..+.. .+ -...|...
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg~-------------------------~~-l~g~L~~~ 66 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGGR-------------------------EI-LKGKLFDS 66 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEETTE-------------------------EE-EEEEBSSC
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEECCE-------------------------EE-Eeeccccc
Confidence 47899999999999999998 89999999999999999974210 01 23579999
Q ss_pred cccCceeEEEeCcE-EEEEEeCC
Q 043469 83 VDKDTISAEFLNGL-LQIIIPKL 104 (104)
Q Consensus 83 vd~~~i~A~~~~Gi-L~I~~pK~ 104 (104)
|+++.-+..+.++. |.|+|-|+
T Consensus 67 I~~eeS~w~i~~~k~v~I~L~K~ 89 (157)
T 2rh0_A 67 TIADEGTWTLEDRKMVRIVLTKT 89 (157)
T ss_dssp BCGGGCEEEEECCCEEEEEEEBS
T ss_pred cCccccEEEEcCCcEEEEEEEEc
Confidence 99999999998875 89999874
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=98.05 E-value=1.1e-05 Score=51.77 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=64.1
Q ss_pred cccceeeEEEcCCEEEEEEEcCCCCCCCeEEEEe-CCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECC
Q 043469 2 EWSPRMNVSELGSNYVMTVEIPGVHVNDIRVEVD-DRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLP 80 (104)
Q Consensus 2 ~~~P~~~i~e~~~~~~i~v~lPG~~~~di~V~v~-~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP 80 (104)
+..|.+.|+++.+..+|++.+|++ +++.|.+. .+.|.+++. . .. ...|.-.+.|=
T Consensus 2 ~~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~-~~--------------------~~~y~~~l~L~ 57 (150)
T 2kmw_A 2 SRNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G-AQ--------------------GERFEFSLELY 57 (150)
T ss_dssp EECCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T-TT--------------------TEEEEEEEEBS
T ss_pred CcCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c-CC--------------------CceEEEEeEhh
Confidence 457999999999999999999997 57888888 789999976 1 11 12466678899
Q ss_pred CCcccCceeEEEeCcEEEEEEeCC
Q 043469 81 TNVDKDTISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 81 ~~vd~~~i~A~~~~GiL~I~~pK~ 104 (104)
..|+++ -+.+.....+.|+|.|+
T Consensus 58 ~~Idpe-S~~~v~~~kIei~L~K~ 80 (150)
T 2kmw_A 58 GKIMTE-YRKNVGLRNIIFSIQKE 80 (150)
T ss_dssp SCEEEE-EEEEEESSSEEEEEEEC
T ss_pred hccccc-ceEEecCCEEEEEEEEC
Confidence 999999 88888888899999874
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=98.01 E-value=2.9e-06 Score=53.57 Aligned_cols=84 Identities=14% Similarity=0.171 Sum_probs=59.1
Q ss_pred ccceeeEEEcCCE-------EEEEEEcCCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEE
Q 043469 3 WSPRMNVSELGSN-------YVMTVEIPGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQI 75 (104)
Q Consensus 3 ~~P~~~i~e~~~~-------~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r 75 (104)
..|.+.+.++.+. ..|++.+|++. ++.|.+..+.|.+++....... .. ....|.-
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~l~~~~~~~~~~g-------~~---------~~~~y~~ 66 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSYIELKAQSKPHVG-------DE---------NVHHYQL 66 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSEEEECCEEC-----------------------CEEBCE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCEEEEEEecccccC-------Cc---------cCceEEE
Confidence 4688999999887 99999999974 8889999999999865432100 00 0113556
Q ss_pred EEECCCCcccCceeEEEeCcE-EEEEEeCC
Q 043469 76 VWTLPTNVDKDTISAEFLNGL-LQIIIPKL 104 (104)
Q Consensus 76 ~~~lP~~vd~~~i~A~~~~Gi-L~I~~pK~ 104 (104)
.+.|...|+++..+..+.++. +.|+|.|+
T Consensus 67 ~l~L~~~Idpe~S~~~v~~~~~vei~L~K~ 96 (134)
T 2cg9_X 67 HIDLYKEIIPEKTMHKVANGQHYFLKLYKK 96 (134)
T ss_dssp EEECSSCCCSSSEEEEECCC--CEEEEEEC
T ss_pred EEEChhhccccccEEEECCCEEEEEEEEEC
Confidence 789999999999999999888 99999874
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=88.37 E-value=1.1 Score=25.25 Aligned_cols=31 Identities=10% Similarity=0.307 Sum_probs=26.7
Q ss_pred ccEEEEEECCCCcccCceeEEEeCcEEEEEEe
Q 043469 71 EPYQIVWTLPTNVDKDTISAEFLNGLLQIIIP 102 (104)
Q Consensus 71 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 102 (104)
..|.-.+.|| .++.+.|+-.+++|.|+|.--
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~ 37 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDGVVEITGK 37 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETTEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEEE
Confidence 3577789999 789999999999999999753
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=87.42 E-value=1.6 Score=25.12 Aligned_cols=34 Identities=9% Similarity=0.200 Sum_probs=28.7
Q ss_pred CEEEEEEEcCC-CCCCCeEEEEeCCEEEEEEEEee
Q 043469 14 SNYVMTVEIPG-VHVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 14 ~~~~i~v~lPG-~~~~di~V~v~~~~L~I~~~~~~ 47 (104)
+.|.-.+.||. ++.+.++-++.+|.|+|+..+..
T Consensus 64 g~f~r~~~LP~~vd~~~i~A~~~~GvL~I~~pK~~ 98 (100)
T 3gla_A 64 GSFHRRFALPDSADADGITAAGRNGVLEIRIPKRP 98 (100)
T ss_dssp EEEEEEEECCTTBCTTSCEEEEETTEEEEEEEBC-
T ss_pred eEEEEEEECCCCcChHHeEEEEeCCEEEEEEecCC
Confidence 36778899996 99999999999999999976643
No 30
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=85.35 E-value=2 Score=24.34 Aligned_cols=31 Identities=3% Similarity=0.251 Sum_probs=26.5
Q ss_pred ccEEEEEECCCCcccCceeEEEeCcEEEEEEe
Q 043469 71 EPYQIVWTLPTNVDKDTISAEFLNGLLQIIIP 102 (104)
Q Consensus 71 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~p 102 (104)
..|.-.+.|| .++.+.|+-.+.+|.|+|.--
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~ 36 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGK 36 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEE
Confidence 3577789999 889999999999999999753
No 31
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=84.92 E-value=2.4 Score=24.57 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=28.8
Q ss_pred EEEEEEEcC-CCCCCCeEEEEeCCEEEEEEEEeec
Q 043469 15 NYVMTVEIP-GVHVNDIRVEVDDRKLTVMAKHSTE 48 (104)
Q Consensus 15 ~~~i~v~lP-G~~~~di~V~v~~~~L~I~~~~~~~ 48 (104)
.|.-.+.|| +++.+.++-++.+|.|+|+..+...
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~GvL~I~lpK~~~ 96 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGGVLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETTEEEEEEEBSSC
T ss_pred EEEEEEECCCCcchhHcEEEEECCEEEEEEEccCc
Confidence 466688999 4999999999999999999877654
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=83.79 E-value=2.5 Score=24.56 Aligned_cols=30 Identities=7% Similarity=0.248 Sum_probs=26.0
Q ss_pred ccEEEEEECCCCcccCceeEEEeCcEEEEEE
Q 043469 71 EPYQIVWTLPTNVDKDTISAEFLNGLLQIII 101 (104)
Q Consensus 71 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 101 (104)
..|.-.+.|| +++.+.|+-.+++|.|+|.-
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g 40 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKVVGDHVEVHA 40 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEEETTEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEE
Confidence 3577788999 88999999999999999975
No 33
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=83.65 E-value=2.5 Score=24.83 Aligned_cols=30 Identities=7% Similarity=0.247 Sum_probs=26.3
Q ss_pred ccEEEEEECCCCcccCceeEEEeCcEEEEEE
Q 043469 71 EPYQIVWTLPTNVDKDTISAEFLNGLLQIII 101 (104)
Q Consensus 71 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 101 (104)
..|.-.+.|| +++.+.|+-.+++|.|+|.-
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g 41 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKVQEDFVEIHG 41 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEEETTEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEEECCEEEEEE
Confidence 4577789999 88999999999999999975
No 34
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=80.84 E-value=3.5 Score=25.91 Aligned_cols=35 Identities=14% Similarity=0.315 Sum_probs=30.4
Q ss_pred CEEEEEEEcC-CCCCCCeEEEEeCCEEEEEEEEeec
Q 043469 14 SNYVMTVEIP-GVHVNDIRVEVDDRKLTVMAKHSTE 48 (104)
Q Consensus 14 ~~~~i~v~lP-G~~~~di~V~v~~~~L~I~~~~~~~ 48 (104)
+.|.=.+.|| +++.+.++-++++|.|+|+..+...
T Consensus 117 g~f~R~~~LP~~vd~~~i~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 117 EEIYRTIKLPATVKEENASAKFENGVLSVILPKAES 152 (161)
T ss_dssp CEEEEEEECSSCBCGGGCEEEEETTEEEEEEEBCGG
T ss_pred ccEEEEEECCCCcccccEEEEEECCEEEEEEEcCCC
Confidence 4788889999 5999999999999999999887544
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=75.40 E-value=6.3 Score=23.51 Aligned_cols=33 Identities=12% Similarity=0.075 Sum_probs=28.3
Q ss_pred EEEEEEEcCC-CCCCCe-EEEEeCCEEEEEEEEee
Q 043469 15 NYVMTVEIPG-VHVNDI-RVEVDDRKLTVMAKHST 47 (104)
Q Consensus 15 ~~~i~v~lPG-~~~~di-~V~v~~~~L~I~~~~~~ 47 (104)
.|.-.+.||. ++.+.+ +-.+.+|.|+|+..+..
T Consensus 82 ~f~R~~~LP~~vd~~~i~~A~~~~GvL~I~lPK~~ 116 (123)
T 3aab_A 82 YVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAG 116 (123)
T ss_dssp EEEEEEECSSEECTTCCCEEEEETTEEEEEEEGGG
T ss_pred EEEEEEECCCCcCcchhCeeEEcCCEEEEEEEcCC
Confidence 6778899995 999999 99999999999976543
No 36
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=74.25 E-value=4.6 Score=23.66 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=29.7
Q ss_pred CCEEEEEEEcCC-CCCCCeEEEEeCCEEEEEEEEe
Q 043469 13 GSNYVMTVEIPG-VHVNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 13 ~~~~~i~v~lPG-~~~~di~V~v~~~~L~I~~~~~ 46 (104)
+..|.+.++|++ +.+++-...+.++.|.|.-.+.
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~~l~i~L~K~ 87 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLSTKIEIKLKKP 87 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSSSEEEEEECS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECCEEEEEEEcC
Confidence 568999999998 9999999999999999886664
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=71.71 E-value=7.3 Score=24.24 Aligned_cols=35 Identities=14% Similarity=0.327 Sum_probs=29.7
Q ss_pred CEEEEEEEcC-CCCCCCeEEEEeCCEEEEEEEEeec
Q 043469 14 SNYVMTVEIP-GVHVNDIRVEVDDRKLTVMAKHSTE 48 (104)
Q Consensus 14 ~~~~i~v~lP-G~~~~di~V~v~~~~L~I~~~~~~~ 48 (104)
+.|.-.+.|| +++.+.++-++.+|.|+|+..+...
T Consensus 104 g~F~R~~~LP~~vd~~~i~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 104 GKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp CCEEEEEECSSCCCGGGCEEEEETTEEEEEEECCCC
T ss_pred cEEEEEEECCCCccccceEEEEECCEEEEEEEccCc
Confidence 4577789998 5999999999999999999877543
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=70.72 E-value=6.3 Score=25.33 Aligned_cols=30 Identities=3% Similarity=0.266 Sum_probs=26.4
Q ss_pred ccEEEEEECCCCcccCceeEEEeCcEEEEEE
Q 043469 71 EPYQIVWTLPTNVDKDTISAEFLNGLLQIII 101 (104)
Q Consensus 71 ~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 101 (104)
..|.-.+.|| +++.+.|+-++.+|.|+|.-
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v~~~~L~I~g 102 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHG 102 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEEETTEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEEECCEEEEEE
Confidence 4577788999 88999999999999999975
No 39
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=69.19 E-value=12 Score=22.32 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=31.8
Q ss_pred EEEcCCEEEEEEEc-CCCCCCCeEEEEeCCEEEEEEEEeecc
Q 043469 9 VSELGSNYVMTVEI-PGVHVNDIRVEVDDRKLTVMAKHSTEC 49 (104)
Q Consensus 9 i~e~~~~~~i~v~l-PG~~~~di~V~v~~~~L~I~~~~~~~~ 49 (104)
+.+.++.+.|.+.+ ||.+++.| ..+.++.|.|+-...+..
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~~~LkV~v~ApP~d 48 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHGDEVKVAITAPPVD 48 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECSSCEEEECCCCSSH
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccCCEEEEEEecCCCC
Confidence 56778899999999 99999877 456788999986666554
No 40
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=68.15 E-value=25 Score=23.75 Aligned_cols=68 Identities=18% Similarity=0.088 Sum_probs=42.0
Q ss_pred EEEEEE---cCCCCCCCeEEEEe--CCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEEEEECCCCcccCceeE
Q 043469 16 YVMTVE---IPGVHVNDIRVEVD--DRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQIVWTLPTNVDKDTISA 90 (104)
Q Consensus 16 ~~i~v~---lPG~~~~di~V~v~--~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r~~~lP~~vd~~~i~A 90 (104)
|.+.++ |||+..+==-+.+. +++|.+.... ....+.-... |.+.|+++|...-|++.|..
T Consensus 13 y~~~~~~~~l~g~~~~lSGla~~~~~~~L~aV~d~--------------~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~ 77 (255)
T 3qqz_A 13 YHATIDGKEIAGITNNISSLTWSAQSNTLFSTINK--------------PAAIVEMTTN-GDLIRTIPLDFVKDLETIEY 77 (255)
T ss_dssp CEEEEEEEECTTCCSCEEEEEEETTTTEEEEEEET--------------TEEEEEEETT-CCEEEEEECSSCSSEEEEEE
T ss_pred eEEEEeceECCCcccCcceeEEeCCCCEEEEEECC--------------CCeEEEEeCC-CCEEEEEecCCCCChHHeEE
Confidence 444444 89998753336665 5778775332 2233333333 78899999987788888765
Q ss_pred EEeCcEEEE
Q 043469 91 EFLNGLLQI 99 (104)
Q Consensus 91 ~~~~GiL~I 99 (104)
. .+|.+.|
T Consensus 78 ~-~~g~~~v 85 (255)
T 3qqz_A 78 I-GDNQFVI 85 (255)
T ss_dssp C-STTEEEE
T ss_pred e-CCCEEEE
Confidence 3 5555544
No 41
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=62.94 E-value=22 Score=22.95 Aligned_cols=20 Identities=20% Similarity=0.293 Sum_probs=16.4
Q ss_pred CCCeEEEEeCCEEEEEEEEe
Q 043469 27 VNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~ 46 (104)
|+.++|+++++.++|+|.+-
T Consensus 11 P~gV~V~i~~~~VtVkGpkG 30 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKG 30 (177)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCe
Confidence 46789999999999987553
No 42
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=62.17 E-value=3.4 Score=24.43 Aligned_cols=25 Identities=20% Similarity=0.384 Sum_probs=19.2
Q ss_pred EcCCEEEEEEEcCCCCCCCeEEEEe
Q 043469 11 ELGSNYVMTVEIPGVHVNDIRVEVD 35 (104)
Q Consensus 11 e~~~~~~i~v~lPG~~~~di~V~v~ 35 (104)
+++..|.|++.||+-.-+.+++.+.
T Consensus 33 ~~~~~Y~itF~~p~~~G~~~ef~v~ 57 (100)
T 3rd4_A 33 EITHYYQVTFRLTTDDRKDLVLNID 57 (100)
T ss_dssp -CCCEEEEEEEESSSSCEEEEEECC
T ss_pred CCceEEEEEEEecCCCCCeEEEEEC
Confidence 5568999999999877777777764
No 43
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=61.61 E-value=27 Score=23.26 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=17.2
Q ss_pred CCCCeEEEEeCCEEEEEEEEee
Q 043469 26 HVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~ 47 (104)
=++.++|+++++.++|+|.+-.
T Consensus 38 IP~gV~V~i~~~~VtVKGPkG~ 59 (212)
T 1nkw_E 38 VPSGVTVNAQDGVFKVKGPKGE 59 (212)
T ss_pred cCCCcEEEEeCCEEEEECCCEE
Confidence 3478899999999999876543
No 44
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=57.27 E-value=19 Score=23.24 Aligned_cols=20 Identities=20% Similarity=0.300 Sum_probs=16.4
Q ss_pred CCCeEEEEeCCEEEEEEEEe
Q 043469 27 VNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~ 46 (104)
|+.++|+++++.++|+|.+-
T Consensus 12 P~gV~v~i~~~~v~VkGpkG 31 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKG 31 (180)
T ss_dssp CTTCEEEEETTEEEEECSSC
T ss_pred CCCcEEEEeCCEEEEEeCCc
Confidence 57899999999999986553
No 45
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=56.14 E-value=37 Score=21.94 Aligned_cols=20 Identities=25% Similarity=0.360 Sum_probs=16.4
Q ss_pred CCCeEEEEeCCEEEEEEEEe
Q 043469 27 VNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~ 46 (104)
|+.++|+++++.++++|.+-
T Consensus 9 P~gV~v~i~~~~vtVkGpkG 28 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNG 28 (178)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCe
Confidence 46789999999999997554
No 46
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=53.73 E-value=15 Score=21.47 Aligned_cols=21 Identities=14% Similarity=0.333 Sum_probs=17.3
Q ss_pred CCCeEEEEeCCEEEEEEEEee
Q 043469 27 VNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~~ 47 (104)
|+.++|+++++.++|+|.+-.
T Consensus 20 P~gV~V~i~~~~VtVKGPkG~ 40 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRGT 40 (100)
T ss_dssp CSSCEEEEETTEEEEEETTEE
T ss_pred CCCCEEEEeCCEEEEECCCce
Confidence 578899999999999976543
No 47
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=50.68 E-value=10 Score=22.44 Aligned_cols=17 Identities=29% Similarity=0.473 Sum_probs=14.3
Q ss_pred ceeEEEeCcEEEEEEeC
Q 043469 87 TISAEFLNGLLQIIIPK 103 (104)
Q Consensus 87 ~i~A~~~~GiL~I~~pK 103 (104)
.+.+.+.+|+|+|+++.
T Consensus 29 d~D~e~~~gVLti~f~~ 45 (106)
T 1ew4_A 29 DIDCEINGGVLTITFEN 45 (106)
T ss_dssp CCEEEEETTEEEEECTT
T ss_pred CEeeeccCCEEEEEECC
Confidence 47888999999999863
No 48
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=50.47 E-value=41 Score=27.51 Aligned_cols=92 Identities=10% Similarity=0.081 Sum_probs=50.8
Q ss_pred eeeEEEcCCEEEEEEEc----------CCCCCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEeeeccccEEE
Q 043469 6 RMNVSELGSNYVMTVEI----------PGVHVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRREYGGEPYQI 75 (104)
Q Consensus 6 ~~~i~e~~~~~~i~v~l----------PG~~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~f~r 75 (104)
.+++++.++.|++++.+ |||+..-|.|.++... .|........ +...+..|...-+-.|.|-.
T Consensus 810 ~~~v~~~~~~~~~~~~~~~~~~npw~~~gfs~q~~~iy~~~~~---~g~~~~l~~~----~~~~~~~W~~~~~~~G~~~~ 882 (1020)
T 1ulv_A 810 GVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGE---GGATPGLPGT----NINLEHAWDSVIVTDGRFDG 882 (1020)
T ss_dssp EEEEEEETTEEEEEEEESSCCCCTTCCSSCSSEEEEEEEECSC---SSCEECSGGG----CCEESSCEEEEEEECCSTTC
T ss_pred eeEEEEcCCEEEEEEEecccCCCCCCCCCcceeEEEEEEECCC---CCCcccCCcc----cCCCCCCccEEEEEeccCCC
Confidence 36889999999999998 6899999999996431 0100000000 01122223222222231222
Q ss_pred E-EECCCCcccCc--eeEEEeCcEEEEEEeCC
Q 043469 76 V-WTLPTNVDKDT--ISAEFLNGLLQIIIPKL 104 (104)
Q Consensus 76 ~-~~lP~~vd~~~--i~A~~~~GiL~I~~pK~ 104 (104)
. +..|+.-.... +.+.-.+..+++.+||.
T Consensus 883 ~~~~~~~g~~~~~~~v~~~~~~~~i~~~v~~~ 914 (1020)
T 1ulv_A 883 AGVYAPDGTRTSAVSLLAVPEARQIVTRVPKA 914 (1020)
T ss_dssp CEEECTTSCEEECCEEEEETTTTEEEEEEEGG
T ss_pred cceECCCCCcCCCceEEEecCCCEEEEEEcHH
Confidence 1 45565544443 34444588999999983
No 49
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=47.90 E-value=38 Score=22.62 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=27.3
Q ss_pred EEEeCCEEEEEEEEeecccccccccCCCcccEEEe---eeccccEEEEEECCCC
Q 043469 32 VEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRR---EYGGEPYQIVWTLPTN 82 (104)
Q Consensus 32 V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~---e~~~~~f~r~~~lP~~ 82 (104)
|.+.++.|+|++.+...... .-.+.+...+ ...+|.|+-+++||..
T Consensus 49 v~v~~G~L~i~~~~~~~~~~-----~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGGVLIIEARRESYEGR-----EYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETTEEEEEEEEEEETTE-----EEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECCEEEEEEEeccCCCC-----CEEEEEEEECCcccccceEEEEEEEccCC
Confidence 55679999999987642100 1111222221 2357889989999953
No 50
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=46.50 E-value=45 Score=19.93 Aligned_cols=32 Identities=9% Similarity=0.149 Sum_probs=23.9
Q ss_pred cccEEEEEECCCCcccCceeEEEeCcEEEEEE
Q 043469 70 GEPYQIVWTLPTNVDKDTISAEFLNGLLQIII 101 (104)
Q Consensus 70 ~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 101 (104)
.....-.|.||.+++...++..+...-|.|.+
T Consensus 13 ~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~ 44 (131)
T 2o30_A 13 LNEINIQFPVTGDADSSAIKIRMVGKKICVKN 44 (131)
T ss_dssp TTEEEEEEECC---CCSCEEEEEETTEEEEEE
T ss_pred CCEEEEEEECCCCCCccceEEEEECCEEEEEE
Confidence 34456678999999999999999999988875
No 51
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=46.45 E-value=18 Score=22.07 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=13.7
Q ss_pred eeEEEeCcEEEEEEeC
Q 043469 88 ISAEFLNGLLQIIIPK 103 (104)
Q Consensus 88 i~A~~~~GiL~I~~pK 103 (104)
+-+.+.+|+|+|+++.
T Consensus 49 ~Dve~~~gVLti~f~~ 64 (123)
T 3oeq_A 49 PDVELSHGVMTLEIPA 64 (123)
T ss_dssp CEEEECSSEEEEECTT
T ss_pred eEEEccCCEEEEEECC
Confidence 6788899999999863
No 52
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=46.25 E-value=13 Score=20.49 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=18.7
Q ss_pred CCCCCeEEEEeCCEEEEEEEEee
Q 043469 25 VHVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 25 ~~~~di~V~v~~~~L~I~~~~~~ 47 (104)
|+.+.|.+...-+.|.|+|+.=.
T Consensus 18 Fd~e~i~L~T~~G~L~IkG~~L~ 40 (71)
T 2ks0_A 18 FDPKEILLETIQGVLSIKGEKLG 40 (71)
T ss_dssp ECSSEEEEEETTEEEEEEEECCC
T ss_pred ECCCEEEEEeCceEEEEEcCCcE
Confidence 67788888888899999987643
No 53
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=45.93 E-value=20 Score=23.89 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=27.9
Q ss_pred eeEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEEe
Q 043469 7 MNVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 7 ~~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~~ 46 (104)
+.+.+.++.+.|++..+.--.+.|.+++++++|.|+-+..
T Consensus 34 V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g~L~I~~~~~ 73 (250)
T 3jx8_A 34 FEYEQSDKAPYLSVTIDENLFDYLVTEVEGGTLKIYPKSI 73 (250)
T ss_dssp EEEEECSSCCEEEEEEEGGGGGGEEEEEETTEEEEEECBC
T ss_pred EEEEECCCCceEEEEECccccceEEEEEECCEEEEEEcCC
Confidence 3444554466677776654467899999999999986543
No 54
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=44.40 E-value=17 Score=22.03 Aligned_cols=29 Identities=7% Similarity=0.182 Sum_probs=24.6
Q ss_pred cCCCCCCCeEEEEeCCEEEEEEEEeeccc
Q 043469 22 IPGVHVNDIRVEVDDRKLTVMAKHSTECW 50 (104)
Q Consensus 22 lPG~~~~di~V~v~~~~L~I~~~~~~~~~ 50 (104)
.|.+++-.|.|.++++.++++|......+
T Consensus 2 ~~~~~p~~i~V~v~~G~VTLsG~Vp~~~~ 30 (132)
T 2kgs_A 2 ASALSLSLLSISRSGNTVTLIGDFPDEAA 30 (132)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEEESCHHH
T ss_pred CCcccceeEEEEEECCEEEEEEECCCHHH
Confidence 46677788999999999999999987664
No 55
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=44.10 E-value=44 Score=21.76 Aligned_cols=28 Identities=11% Similarity=0.128 Sum_probs=19.1
Q ss_pred EEcCCCCCCCeEEEEeCCEEEEEEEEee
Q 043469 20 VEIPGVHVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 20 v~lPG~~~~di~V~v~~~~L~I~~~~~~ 47 (104)
...|=-=|+.++|+++++.++|+|.+-.
T Consensus 6 ~k~pI~IP~gV~V~i~~~~VtVkGpkG~ 33 (192)
T 2zkr_e 6 SNQTVDIPENVDITLKGRTVIVKGPRGT 33 (192)
T ss_dssp ----CCCCTTCEEEEETTEEEEEETTEE
T ss_pred ccCcEEcCCCCEEEEeCCEEEEECCCeE
Confidence 3445445688999999999999976543
No 56
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=44.01 E-value=64 Score=22.67 Aligned_cols=55 Identities=9% Similarity=-0.006 Sum_probs=29.9
Q ss_pred CCCCeEEEEeCCEEEEEEEEeeccccccccc--CCC--cccEEEe--eeccccEEEEEECCCC
Q 043469 26 HVNDIRVEVDDRKLTVMAKHSTECWKVAGCS--NGS--ISAYHRR--EYGGEPYQIVWTLPTN 82 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~--~~~--~~~~~~~--e~~~~~f~r~~~lP~~ 82 (104)
+++++. ++++.|+|++.+.......++.. .-. ..+.... ...+|.|+-+++||..
T Consensus 85 ~~~Nv~--v~dG~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVS--VKKGCLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEE--EETTEEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEE--EECCEEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 445544 45999999998875421000000 000 0122222 2467899999999964
No 57
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=43.46 E-value=26 Score=19.77 Aligned_cols=24 Identities=29% Similarity=0.338 Sum_probs=18.2
Q ss_pred CCCCCeEEEEeCCEEEEEEEEeec
Q 043469 25 VHVNDIRVEVDDRKLTVMAKHSTE 48 (104)
Q Consensus 25 ~~~~di~V~v~~~~L~I~~~~~~~ 48 (104)
+.-+||.|.++++.+++.|+.+.-
T Consensus 74 lgyndinvtfdgdtvtvegqlegg 97 (106)
T 1qys_A 74 LGYNDINVTFDGDTVTVEGQLEGG 97 (106)
T ss_dssp TTCCEEEEEEETTEEEEEEEC---
T ss_pred hCCcceeEEEcCCeEEEEeEEcCC
Confidence 345799999999999999987544
No 58
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=42.81 E-value=67 Score=20.88 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=16.8
Q ss_pred CCCeEEEEeCCEEEEEEEEe
Q 043469 27 VNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~ 46 (104)
|+.++|+++++.++|+|.+-
T Consensus 13 P~gV~v~i~~~~V~VkGPkG 32 (191)
T 3u5e_H 13 PEGVTVSIKSRIVKVVGPRG 32 (191)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCcEEEEeCCEEEEEcCCe
Confidence 57899999999999997654
No 59
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=40.68 E-value=29 Score=20.34 Aligned_cols=35 Identities=20% Similarity=0.202 Sum_probs=27.3
Q ss_pred Ccccce-eeEEEcCCEEEEEEEcCCCCCCCeEEEEe
Q 043469 1 IEWSPR-MNVSELGSNYVMTVEIPGVHVNDIRVEVD 35 (104)
Q Consensus 1 ~~~~P~-~~i~e~~~~~~i~v~lPG~~~~di~V~v~ 35 (104)
|.|.++ +.+.|.++.+.|++..-|-....+.|.+.
T Consensus 5 i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~ 40 (114)
T 3e9t_A 5 MYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYE 40 (114)
T ss_dssp EEESSSEEEEETTCCEEEEEEEEEECCSSCEEEEEE
T ss_pred EEEeCCEEEEEcCCeEEEEEEEEECCCCeeEEEEEE
Confidence 345555 68888889999999998877778888773
No 60
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=39.11 E-value=69 Score=19.91 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=27.3
Q ss_pred ccccEEEEEECCCCcccCceeEEEeCcEEEEEE
Q 043469 69 GGEPYQIVWTLPTNVDKDTISAEFLNGLLQIII 101 (104)
Q Consensus 69 ~~~~f~r~~~lP~~vd~~~i~A~~~~GiL~I~~ 101 (104)
+.....-.|.||..+....++..+...-|.|.+
T Consensus 21 t~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~ 53 (157)
T 2rh0_A 21 TLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV 53 (157)
T ss_dssp CSSEEEEEEECCTTCCGGGEEEEECSSEEEEEE
T ss_pred cCCEEEEEEECCCCCcccceEEEEecCEEEEEE
Confidence 344566689999999999999999999998875
No 61
>2hyk_A Beta-1,3-glucanase; family 16, beta-jelly roll, bacterial endo-beta-1,3-glucanas hydrolase; 1.30A {Nocardiopsis SP} PDB: 3atg_A
Probab=38.89 E-value=31 Score=22.81 Aligned_cols=44 Identities=9% Similarity=0.123 Sum_probs=26.2
Q ss_pred EEEeC-CEEEEEEEEeecccccccccCCCcccEEEee---eccccEEEEEECCCC
Q 043469 32 VEVDD-RKLTVMAKHSTECWKVAGCSNGSISAYHRRE---YGGEPYQIVWTLPTN 82 (104)
Q Consensus 32 V~v~~-~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e---~~~~~f~r~~~lP~~ 82 (104)
+.+.+ +.|+|++.+.... .-.+.+..... ...|.|+-+++||..
T Consensus 52 ~~v~~~G~L~I~~~~~~~~-------~~~S~~i~S~~~f~~~yG~~E~r~klp~g 99 (245)
T 2hyk_A 52 SALDGNGNLVITARQEADG-------GYTSARLTTQNKVQPQYGRVEASIQIPRG 99 (245)
T ss_dssp EEECSSSCEEEEEEECTTS-------CEEECEEECTTTCCCCSEEEEEEEECCCS
T ss_pred eEEecCCEEEEEEEecCCC-------CEEEEEEEccCcccccCCeEEEEEEcCCC
Confidence 35555 8999998876421 11122232222 346889999999953
No 62
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=38.35 E-value=29 Score=17.77 Aligned_cols=24 Identities=29% Similarity=0.300 Sum_probs=19.7
Q ss_pred CCCCCeEEEEeCCEEEEEEEEeec
Q 043469 25 VHVNDIRVEVDDRKLTVMAKHSTE 48 (104)
Q Consensus 25 ~~~~di~V~v~~~~L~I~~~~~~~ 48 (104)
+.-+||.|.-+++++++.|+...-
T Consensus 30 lgyndinvtwdgdtvtvegqlegg 53 (62)
T 2gjh_A 30 LGYNDINVTWDGDTVTVEGQLEGG 53 (62)
T ss_dssp TTCCSCEEEECSSCEEEEEECCCC
T ss_pred hCcccceeEEcCCEEEEEeEEcCC
Confidence 345789999999999999987654
No 63
>1nvp_C Transcription initiation factor IIA beta chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: b.56.1.1
Probab=36.94 E-value=17 Score=20.33 Aligned_cols=15 Identities=13% Similarity=0.439 Sum_probs=12.2
Q ss_pred cCceeEEEeCcEEEE
Q 043469 85 KDTISAEFLNGLLQI 99 (104)
Q Consensus 85 ~~~i~A~~~~GiL~I 99 (104)
-.+=++.+++|+|+|
T Consensus 46 KnkWKc~LKdGim~i 60 (76)
T 1nvp_C 46 KNKWKFHLKDGIMNL 60 (76)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CceEEEEEeccEEEE
Confidence 345789999999987
No 64
>4atf_A Beta-agarase B; hydrolase, polysaccharidase, agarolytic enzyme; HET: AAL GAL; 1.90A {Zobellia galactanivorans}
Probab=36.46 E-value=56 Score=22.86 Aligned_cols=48 Identities=8% Similarity=-0.056 Sum_probs=27.7
Q ss_pred CCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEee-eccc-cEEEEEECCC
Q 043469 26 HVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRRE-YGGE-PYQIVWTLPT 81 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~-~f~r~~~lP~ 81 (104)
.++++. ++++.|+|++.+..... ...+++..... ..+| .|+-+++||.
T Consensus 72 ~~~Nv~--v~dG~L~I~a~~~~~~~------~~tSg~i~Sk~~~~ygg~~EaR~Kl~~ 121 (308)
T 4atf_A 72 KRDRSY--VADGELKMWATRKPGSD------KINMGCITSKTRVVYPVYIEARAKVMN 121 (308)
T ss_dssp CGGGEE--EETTEEEEECEECTTSS------CEEECEEEESSCBCSSEEEEEEEECCS
T ss_pred cccceE--EECCEEEEEEEecCCCC------CEEEEEEEECceeecCeEEEEEEECCC
Confidence 345544 46999999998753210 11122222221 2455 7888999984
No 65
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=35.65 E-value=27 Score=21.37 Aligned_cols=17 Identities=18% Similarity=0.411 Sum_probs=14.3
Q ss_pred CceeEEEeCcEEEEEEe
Q 043469 86 DTISAEFLNGLLQIIIP 102 (104)
Q Consensus 86 ~~i~A~~~~GiL~I~~p 102 (104)
..+.+.+.+|+|+|+++
T Consensus 40 ~d~D~e~~~gVLti~f~ 56 (129)
T 3t3l_A 40 EDYDVSFGSGVLTVKLG 56 (129)
T ss_dssp TTCEEEEETTEEEEECC
T ss_pred cceeeecCCCEEEEEEc
Confidence 45778899999999984
No 66
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=35.32 E-value=69 Score=18.85 Aligned_cols=32 Identities=9% Similarity=0.242 Sum_probs=26.7
Q ss_pred cccEEEEEECCCCc-ccCceeEEEeCcEEEEEE
Q 043469 70 GEPYQIVWTLPTNV-DKDTISAEFLNGLLQIII 101 (104)
Q Consensus 70 ~~~f~r~~~lP~~v-d~~~i~A~~~~GiL~I~~ 101 (104)
.....-.|.||..+ +.+.++..+...-|.|.+
T Consensus 28 ~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~ 60 (124)
T 1wgv_A 28 YTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAM 60 (124)
T ss_dssp TTEEEEEEECCTTCCSGGGEEEEECSSEEEEEE
T ss_pred ccEEEEEEEcCCCCCchhheEEEEEcCEEEEEE
Confidence 44566688999888 899999999999998876
No 67
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=34.23 E-value=80 Score=21.51 Aligned_cols=43 Identities=19% Similarity=0.235 Sum_probs=26.9
Q ss_pred CCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEE-EeeeccccEEEEEECCCC
Q 043469 26 HVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYH-RREYGGEPYQIVWTLPTN 82 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~-~~e~~~~~f~r~~~lP~~ 82 (104)
.++++.| +++.|+|++.+.. +.++. .....+|.|+-+++||..
T Consensus 31 ~~~Nv~v--~~G~L~L~~~k~t------------sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQGSLTIWLDSTS------------GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETTEEEEEECSSC------------CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECCEEEEEEecCC------------CCEEEECceEeeEEEEEEEEeCCC
Confidence 3455555 7888999865431 11221 224467899999999964
No 68
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=34.13 E-value=61 Score=20.83 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=26.2
Q ss_pred EEEeC-CEEEEEEEEeecccccccccCCCcccEEEe-eeccccEEEEEECCC
Q 043469 32 VEVDD-RKLTVMAKHSTECWKVAGCSNGSISAYHRR-EYGGEPYQIVWTLPT 81 (104)
Q Consensus 32 V~v~~-~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~lP~ 81 (104)
+.+.+ +.|.|++.+.... .-.+.+.... ...+|.|+-++++|.
T Consensus 39 v~v~~~G~L~i~~~~~~~~-------~~~s~~i~S~~~f~yG~~E~r~k~p~ 83 (214)
T 2ayh_A 39 VNFTNDGKLKLGLTSSAYN-------KFDCAEYRSTNIYGYGLYEVSMKPAK 83 (214)
T ss_dssp EEECTTSCEEEEEEEEETT-------EEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEcCCCEEEEEEecCCCC-------ceeeEEEEECCeEeeEEEEEEEEcCC
Confidence 56677 9999998876421 0111222221 235788999999985
No 69
>3lyc_A Putative pectinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: MSE; 2.30A {Parabacteroides distasonis}
Probab=33.76 E-value=25 Score=23.24 Aligned_cols=38 Identities=13% Similarity=0.198 Sum_probs=24.5
Q ss_pred eEEEcCCEEEEEEEcCCCCCCCeEEEEeCCEEEEEEEE
Q 043469 8 NVSELGSNYVMTVEIPGVHVNDIRVEVDDRKLTVMAKH 45 (104)
Q Consensus 8 ~i~e~~~~~~i~v~lPG~~~~di~V~v~~~~L~I~~~~ 45 (104)
.+.+.++.+.|++..+.--.+.|.+++++++|.|.-+.
T Consensus 29 ~l~qgd~~~~V~i~~~~nl~~~v~~~v~~g~L~I~~~~ 66 (241)
T 3lyc_A 29 NYTQSDAPEGLEIKTDRNIFEKYEFNVENHKLKIRPKK 66 (241)
T ss_dssp EEEECSSCCEEEEEEEHHHHTTEEEEEETTEEEEEECG
T ss_pred EEEECCCCceEEEEECccccceEEEEEECCEEEEEEcC
Confidence 34444345566666554334678889999999997544
No 70
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=33.58 E-value=75 Score=18.70 Aligned_cols=34 Identities=6% Similarity=0.074 Sum_probs=27.9
Q ss_pred ccccEEEEEECCCC--cccCceeEEEeCcEEEEEEe
Q 043469 69 GGEPYQIVWTLPTN--VDKDTISAEFLNGLLQIIIP 102 (104)
Q Consensus 69 ~~~~f~r~~~lP~~--vd~~~i~A~~~~GiL~I~~p 102 (104)
+.....-.|+||.. ++.+.+...+....|.|.+.
T Consensus 24 t~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k 59 (121)
T 3qor_A 24 TLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK 59 (121)
T ss_dssp CSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET
T ss_pred ccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc
Confidence 45567778999988 88999999999888888764
No 71
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=31.17 E-value=52 Score=19.52 Aligned_cols=34 Identities=12% Similarity=-0.004 Sum_probs=26.1
Q ss_pred cccce-eeEEEcCCEEEEEEEcCCCCCCCeEEEEe
Q 043469 2 EWSPR-MNVSELGSNYVMTVEIPGVHVNDIRVEVD 35 (104)
Q Consensus 2 ~~~P~-~~i~e~~~~~~i~v~lPG~~~~di~V~v~ 35 (104)
.|.++ +.+.|....+.|+|..-|-....+.|.+.
T Consensus 9 ~F~~~~y~V~E~~g~~~v~V~R~gg~~g~v~V~y~ 43 (123)
T 3fso_A 9 SFEQPEFSVSRGDQVARIPVIRRVLDGGKSQVSYR 43 (123)
T ss_dssp EESCSEEEEEGGGSEEEEEEEEESCCSSCEEEEEE
T ss_pred EEeCCEEEEEcCceEEEEEEEEeCCCCceEEEEEE
Confidence 45554 68888888999999888777777777763
No 72
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=30.76 E-value=54 Score=19.74 Aligned_cols=34 Identities=21% Similarity=0.183 Sum_probs=27.0
Q ss_pred cccce-eeEEEcCCEEEEEEEcCCCCCCCeEEEEe
Q 043469 2 EWSPR-MNVSELGSNYVMTVEIPGVHVNDIRVEVD 35 (104)
Q Consensus 2 ~~~P~-~~i~e~~~~~~i~v~lPG~~~~di~V~v~ 35 (104)
.|.++ +.+.|..+.+.|.+..-|-....+.|.+.
T Consensus 8 ~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~ 42 (137)
T 3ead_A 8 YFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYE 42 (137)
T ss_dssp EESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEE
T ss_pred EEcCCEEEEECCCeEEEEEEEEECCCCceEEEEEE
Confidence 45555 68888889999999998877788888873
No 73
>1nh2_C Transcription initiation factor IIA large chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: b.56.1.1 PDB: 1ytf_C*
Probab=30.66 E-value=25 Score=19.81 Aligned_cols=15 Identities=20% Similarity=0.401 Sum_probs=12.1
Q ss_pred cCceeEEEeCcEEEE
Q 043469 85 KDTISAEFLNGLLQI 99 (104)
Q Consensus 85 ~~~i~A~~~~GiL~I 99 (104)
-.+=++.+++|+++|
T Consensus 48 KnKWKc~LKdGi~~i 62 (79)
T 1nh2_C 48 KARWKCSLKDGVVTI 62 (79)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred cceEEEEEeeeEEEE
Confidence 345789999999987
No 74
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=29.50 E-value=52 Score=21.36 Aligned_cols=25 Identities=12% Similarity=0.105 Sum_probs=18.9
Q ss_pred CCCCCCCeEEEEeCCEEEEEEEEee
Q 043469 23 PGVHVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 23 PG~~~~di~V~v~~~~L~I~~~~~~ 47 (104)
|=-=|+.++|+++++.++|+|.+-.
T Consensus 9 ~I~IP~gV~v~i~~~~V~VkGPkG~ 33 (188)
T 4a17_E 9 NVPIPDKVTITAKQRVVEVKGPLGT 33 (188)
T ss_dssp ECCCCTTCEEEEETTEEEEEETTEE
T ss_pred cEECCCCcEEEEeCCEEEEEcCCeE
Confidence 3334678999999999999886643
No 75
>1o4z_A Beta-agarase B; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: EPE; 2.30A {Zobellia galactanivorans} SCOP: b.29.1.2
Probab=29.19 E-value=95 Score=21.91 Aligned_cols=48 Identities=8% Similarity=-0.060 Sum_probs=28.7
Q ss_pred CCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEee-eccc-cEEEEEECCCC
Q 043469 27 VNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRRE-YGGE-PYQIVWTLPTN 82 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~-~f~r~~~lP~~ 82 (104)
++++ .+.++.|+|++.+..-.. .-.+.+..... ..+| .|+-+++||..
T Consensus 104 ~~Nv--~v~dG~L~I~a~~~~g~~------~~tSg~i~Sk~~f~YGr~vEaRaKlp~g 153 (346)
T 1o4z_A 104 RDRS--YVADGELKMWATRKPGSD------KINMGCITSKTRVVYPVYIEARAKVMNS 153 (346)
T ss_dssp GGGE--EEETTEEEEECEECTTSS------CEEECEEEESSCBCSSEEEEEEEECCSS
T ss_pred ccCE--EEECCEEEEEEEecCCCC------cEEeeEEEeCccEeCCeEEEEEEEecCC
Confidence 4454 456999999998764210 11122332222 4678 59999999964
No 76
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=29.00 E-value=54 Score=21.33 Aligned_cols=20 Identities=20% Similarity=0.295 Sum_probs=15.7
Q ss_pred CCCeEEEEeCCEEEEEEEEe
Q 043469 27 VNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~ 46 (104)
|+.++|+++++.++|+|.+-
T Consensus 13 P~gV~v~i~~~~V~VkGPkG 32 (190)
T 3iz5_F 13 PEGVTVQVAAKVVTVEGPRG 32 (190)
T ss_dssp CTTCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCc
Confidence 46788888888888887654
No 77
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=27.96 E-value=36 Score=22.20 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=25.2
Q ss_pred eeEEEcCC-EEEEEEEcCCCCCCCeEEEEeCCEEEEEEE
Q 043469 7 MNVSELGS-NYVMTVEIPGVHVNDIRVEVDDRKLTVMAK 44 (104)
Q Consensus 7 ~~i~e~~~-~~~i~v~lPG~~~~di~V~v~~~~L~I~~~ 44 (104)
+.+.+.++ .+.|++.-+.--.+.|.+++++++|.|.-+
T Consensus 32 V~l~qg~~~~~~V~i~g~~nl~~~i~~~v~~g~L~I~~~ 70 (221)
T 3pet_A 32 IYYTQSTDGKTDLQIYGPDNIVALIQVAVKDNTLFLSID 70 (221)
T ss_dssp EEEEECSSSCCEEEEEEEHHHHTTEEEEEETTEEEEEEC
T ss_pred EEEEECCCCcEEEEEEEChhhcceEEEEEECCEEEEEEc
Confidence 34444442 566666665433468999999999999854
No 78
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=27.42 E-value=17 Score=22.79 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=12.4
Q ss_pred EEEeCcEEEEEEeC
Q 043469 90 AEFLNGLLQIIIPK 103 (104)
Q Consensus 90 A~~~~GiL~I~~pK 103 (104)
|.++||-|.|.+|.
T Consensus 21 AqW~~nkl~I~~P~ 34 (148)
T 3bqa_A 21 AKWENNKLHVELPE 34 (148)
T ss_dssp CEEETTEEECCCCH
T ss_pred hhhcCCceeEeCCC
Confidence 78999999999984
No 79
>3r8s_G 50S ribosomal protein L6; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_E 1p86_E 2awb_G 2aw4_G 2i2v_G 2j28_G 2i2t_G* 2qao_G* 2qba_G* 2qbc_G* 2qbe_G 2qbg_G 2qbi_G* 2qbk_G* 2qov_G 2qox_G 2qoz_G* 2qp1_G* 2rdo_G 2vhm_G ...
Probab=26.91 E-value=41 Score=21.60 Aligned_cols=19 Identities=16% Similarity=0.396 Sum_probs=14.5
Q ss_pred CCCeEEEEeCCEEEEEEEE
Q 043469 27 VNDIRVEVDDRKLTVMAKH 45 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~ 45 (104)
|+.++|+++++.++|+|.+
T Consensus 11 P~gV~v~i~~~~V~VkGpk 29 (176)
T 3r8s_G 11 PAGVDVKINGQVITIKGKN 29 (176)
T ss_dssp CTTCCCEESSSEEECCBTT
T ss_pred CCCcEEEEeCCEEEEEcCC
Confidence 4678888888888887544
No 80
>2vy0_A Endo-beta-1,3-glucanase; hydrolase, laminarin, endoglucanase, thermostable protein,; 2.16A {Pyrococcus furiosus}
Probab=25.63 E-value=1.2e+02 Score=20.07 Aligned_cols=51 Identities=14% Similarity=0.057 Sum_probs=27.3
Q ss_pred EEEeCCEEEEEEEEeecccccccccCCCcccEEEe---eec-cccEEEEEECCCC
Q 043469 32 VEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRR---EYG-GEPYQIVWTLPTN 82 (104)
Q Consensus 32 V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~---e~~-~~~f~r~~~lP~~ 82 (104)
+.+.++.|+|++.+........|...-.+.+...+ ... .|.|+-+++||..
T Consensus 59 ~~v~~G~L~I~~~~~~~~~~~~G~~~~~S~~i~S~~~f~~~~yG~~E~r~klp~g 113 (264)
T 2vy0_A 59 TYIVNGTLVIEARKEIITDPNEGTFLYTSSRLKTEGKVEFSPPVVVEARIKLPKG 113 (264)
T ss_dssp EEEETTEEEEEEEEEEEEETTTEEEEEEECEEECTTTCEECSSEEEEEEEECCCS
T ss_pred eEecCCEEEEEEEecccCCCCCCCccEEEEEEEecCcccccCCeEEEEEEEcCCC
Confidence 46789999999987653210000000011222222 123 6788888899853
No 81
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=24.38 E-value=45 Score=21.60 Aligned_cols=20 Identities=20% Similarity=0.308 Sum_probs=15.1
Q ss_pred CCCeEEEEeCCEEEEEEEEe
Q 043469 27 VNDIRVEVDDRKLTVMAKHS 46 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~ 46 (104)
|+.++|+++++.++|+|.+-
T Consensus 14 P~gV~v~i~~~~V~VkGpkG 33 (184)
T 3j21_F 14 PEGVEVTVEGYKVKVKGPKG 33 (184)
T ss_dssp CSSCEEEESSSEEEEECSSC
T ss_pred CCCcEEEEeCCEEEEEcCCe
Confidence 36788888888888886654
No 82
>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A
Probab=24.11 E-value=36 Score=19.40 Aligned_cols=23 Identities=4% Similarity=0.288 Sum_probs=16.1
Q ss_pred CCcccCceeEEEeCcEEEEEEeC
Q 043469 81 TNVDKDTISAEFLNGLLQIIIPK 103 (104)
Q Consensus 81 ~~vd~~~i~A~~~~GiL~I~~pK 103 (104)
.....-+|+--|+|.++.|++|-
T Consensus 8 pq~~~~KVK~yy~DDIiAIrvP~ 30 (85)
T 1ip9_A 8 SGLKTTKIKFYYKDDIFALMLKG 30 (85)
T ss_dssp CCCCCEEEEECBTTCCEEEEECS
T ss_pred CccCceEEEEEecCcEEEEECCC
Confidence 34444456666789999999984
No 83
>1jrm_A MTH0637, conserved hypothetical protein MTH637; alpha-beta protein, structural genomics, OCSP, NESG; NMR {Methanothermobacterthermautotrophicus} SCOP: d.206.1.1
Probab=23.55 E-value=1e+02 Score=17.98 Aligned_cols=40 Identities=15% Similarity=0.370 Sum_probs=28.5
Q ss_pred EEEcCCEEEEEEEc-CCCCCCCeEEEEe--CCEEEEEEEEeecc
Q 043469 9 VSELGSNYVMTVEI-PGVHVNDIRVEVD--DRKLTVMAKHSTEC 49 (104)
Q Consensus 9 i~e~~~~~~i~v~l-PG~~~~di~V~v~--~~~L~I~~~~~~~~ 49 (104)
+.+.++.+.|.+.+ ||.+++.|. .+. ++.|.|+-...+..
T Consensus 7 ~~~~~~~~~l~v~v~P~A~r~~i~-g~~~~~~~lkv~v~ApP~d 49 (104)
T 1jrm_A 7 LREVGDDLLVNIEVSPASGKFGIP-SYNEWRKRIEVKIHSPPQK 49 (104)
T ss_dssp EEEETTEEEEEEESCCCSSSCCCC-CCCTTTTCCCCCCCTTCCC
T ss_pred EEECCCcEEEEEEEeeCCCcceEe-eeeccCCEEEEEEecCCCC
Confidence 45667889999999 999988873 333 67777775554443
No 84
>4ate_A Beta-porphyranase A; hydrolase, AGAR degradation; 1.10A {Zobellia galactanivorans} PDB: 3ilf_A*
Probab=23.44 E-value=1.7e+02 Score=19.79 Aligned_cols=52 Identities=13% Similarity=-0.028 Sum_probs=27.0
Q ss_pred CCCeEEEEeCCEEEEEEEEeeccccccc---ccCCCcccEEEee-eccc-cEEEEEECC
Q 043469 27 VNDIRVEVDDRKLTVMAKHSTECWKVAG---CSNGSISAYHRRE-YGGE-PYQIVWTLP 80 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~~~~~~~~~---~~~~~~~~~~~~e-~~~~-~f~r~~~lP 80 (104)
++++ .+.++.|+|++.+.......++ ...-.+.+..... ...| .|+-++++|
T Consensus 55 ~~Nv--~v~dG~L~I~a~~~~~~~~~~~~~~~~~y~s~~i~s~~~~~~G~~~e~r~k~p 111 (266)
T 4ate_A 55 KGNA--FVSDGFLNLRSTLRKEPSSVQDPFKDIWVDAAAAVSKTKAQPGYYYEARFKAS 111 (266)
T ss_dssp TTSE--EEETTEEEEECEESSCGGGSSCTTTSCCEEECEEEEEEEECTTCEEEEEEECC
T ss_pred hhhE--EEeCCcEEEEEEecCCCcccccCCCCccEEEEEEEEeCcCcCCeEEEEEEEcC
Confidence 3554 4579999999987542210000 0001122222222 3467 688888887
No 85
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=23.18 E-value=1.7e+02 Score=19.42 Aligned_cols=20 Identities=20% Similarity=0.326 Sum_probs=15.0
Q ss_pred CCCCeEEEEeCCEEEEEEEEee
Q 043469 26 HVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~ 47 (104)
.+++ +.++++.|+|++.+..
T Consensus 44 ~~~n--v~v~~G~L~I~a~~~~ 63 (271)
T 1dyp_A 44 KNEN--ATVSKGKLKLTTKRES 63 (271)
T ss_dssp CGGG--EEEETTEEEEEEEEEE
T ss_pred CCcc--EEEECCEEEEEEEecc
Confidence 4455 5668999999998765
No 86
>4asm_B Beta-agarase D; hydrolase, glycoside hydrolase, endo-beta-agarase; 1.50A {Zobellia galactanivorans}
Probab=22.27 E-value=1.3e+02 Score=21.71 Aligned_cols=20 Identities=25% Similarity=0.278 Sum_probs=14.3
Q ss_pred CCCCeEEEEeCCEEEEEEEEee
Q 043469 26 HVNDIRVEVDDRKLTVMAKHST 47 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~ 47 (104)
.+++ |.+.++.|+|++.+..
T Consensus 80 ~~eN--v~V~dG~LvItA~r~~ 99 (363)
T 4asm_B 80 MQNH--VAVSGGNLNIWASRIP 99 (363)
T ss_dssp CTTS--EEEETTEEEEEEECCT
T ss_pred eccc--EEEECCEEEEEEEecC
Confidence 3455 4456999999998753
No 87
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=21.37 E-value=1.4e+02 Score=19.78 Aligned_cols=43 Identities=9% Similarity=0.097 Sum_probs=25.4
Q ss_pred EEEeC-CEEEEEEEEeecccccccccCCCcccEEEe-eeccccEEEEEECCC
Q 043469 32 VEVDD-RKLTVMAKHSTECWKVAGCSNGSISAYHRR-EYGGEPYQIVWTLPT 81 (104)
Q Consensus 32 V~v~~-~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~~~f~r~~~lP~ 81 (104)
+.+.+ +.|+|++.+.... .-...+.... ...+|.|+-++++|.
T Consensus 63 v~v~~~G~L~l~~~~~~~~-------~~ts~~i~S~~~~~yG~~e~r~K~p~ 107 (238)
T 3o5s_A 63 VSMTSLGEMRLALTSPAYN-------KFDCGENRSVQTYGYGLYEVRMKPAK 107 (238)
T ss_dssp EEECTTSCEEEEEEEEETT-------EEEEEEEEESSCBCSEEEEEEEECCC
T ss_pred EEEeCCCEEEEEEEeCCCC-------ceeEEEEEEcCeEccEEEEEEEEeCC
Confidence 56665 7899998776421 0011122222 246788999999884
No 88
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans}
Probab=21.26 E-value=1.4e+02 Score=20.29 Aligned_cols=54 Identities=9% Similarity=0.000 Sum_probs=28.3
Q ss_pred CCCeEEEEeCCEEEEEEEEeeccccccccc-CCCcccEEEe-eeccccEEEEEECCCC
Q 043469 27 VNDIRVEVDDRKLTVMAKHSTECWKVAGCS-NGSISAYHRR-EYGGEPYQIVWTLPTN 82 (104)
Q Consensus 27 ~~di~V~v~~~~L~I~~~~~~~~~~~~~~~-~~~~~~~~~~-e~~~~~f~r~~~lP~~ 82 (104)
++++. +.++.|+|++.+.......++.. .-.+.+.... ...+|.|+-+++||..
T Consensus 64 ~~nv~--v~~G~L~I~a~~~~~~~~~~g~~~~~~sg~i~s~~~~~yG~~E~r~k~p~g 119 (280)
T 3juu_A 64 AENIS--LNNGSLQITTTMLPEPIVKNNKTYTHGGGYVGSRNGMTYGYYECEMKANKT 119 (280)
T ss_dssp GGGEE--EETTEEEEECEEEEEEEEETTEEEEEEEEEEEESSCBSSEEEEEEEECCSS
T ss_pred hhheE--EECCEEEEEEEcCCCccccCCCeEEEEEEEEEEecceeCEEEEEEEEcCCC
Confidence 44544 47999999998865321000000 0001111111 2356889999999963
No 89
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=21.13 E-value=1.2e+02 Score=19.82 Aligned_cols=33 Identities=15% Similarity=0.007 Sum_probs=25.7
Q ss_pred cccce-eeEEEcCCEEEEEEEcCCCCCCCeEEEE
Q 043469 2 EWSPR-MNVSELGSNYVMTVEIPGVHVNDIRVEV 34 (104)
Q Consensus 2 ~~~P~-~~i~e~~~~~~i~v~lPG~~~~di~V~v 34 (104)
.|.++ +.+.|..+.+.|+|..-|-....+.|.+
T Consensus 9 sF~~~~y~V~E~~G~v~vtV~R~gg~~g~VsV~y 42 (192)
T 2qvk_A 9 TFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPY 42 (192)
T ss_dssp EESCSEEEEETTCCEEEEEEEEESCCCSCEEEEE
T ss_pred EEcCCeEEEEcCceEEEEEEEEeCCCCceEEEEE
Confidence 45554 7888888899999888777777777777
No 90
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=21.13 E-value=92 Score=18.11 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=17.8
Q ss_pred cccEEEEEECCCCcccCceeEEEeCc
Q 043469 70 GEPYQIVWTLPTNVDKDTISAEFLNG 95 (104)
Q Consensus 70 ~~~f~r~~~lP~~vd~~~i~A~~~~G 95 (104)
.|-|..+|.+|. ...+++.|.||
T Consensus 48 ~Gw~~~TI~~~~---~~~l~~~F~dG 70 (102)
T 2c3v_A 48 EGXVKVTIEAEE---GSQLRAAFNNG 70 (102)
T ss_dssp TTEEEEEECCCT---TCEEEEEEECS
T ss_pred CCceEEEEecCC---CceEEEEEeCC
Confidence 566788998884 36788888877
No 91
>1o4y_A Beta-agarase A; glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-D-galactose linkages; HET: SO4; 1.48A {Zobellia galactanivorans} SCOP: b.29.1.2 PDB: 1urx_A*
Probab=20.90 E-value=1.7e+02 Score=19.75 Aligned_cols=46 Identities=7% Similarity=-0.011 Sum_probs=26.3
Q ss_pred CCCCeEEEEeCCEEEEEEEEeecccccccccCCCcccEEEee-eccc-cEEEEEECC
Q 043469 26 HVNDIRVEVDDRKLTVMAKHSTECWKVAGCSNGSISAYHRRE-YGGE-PYQIVWTLP 80 (104)
Q Consensus 26 ~~~di~V~v~~~~L~I~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~~-~f~r~~~lP 80 (104)
+++++ .+.++.|+|++.+.... .-.+.+..... ..+| .|+-+++||
T Consensus 66 ~~~nv--~v~~G~L~I~~~~~~~~-------~~~Sg~i~S~~~f~yG~~vE~r~Kl~ 113 (288)
T 1o4y_A 66 NAPQA--WTNGSQLAIQAQPAGNG-------KSYNGIITSKNKIQYPVYMEIKAKIM 113 (288)
T ss_dssp CGGGE--EEESSCEEEEEEEEETT-------EEEECEEEESSCBCSSEEEEEEEECC
T ss_pred Cchhe--EEECCEEEEEEEeCCCC-------CEEEEEEEecCcccCCeEEEEEEEcC
Confidence 44554 56799999999654311 11223333322 3567 788888874
No 92
>3ljy_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: PGE; 2.41A {Parabacteroides distasonis}
Probab=20.76 E-value=97 Score=20.36 Aligned_cols=27 Identities=30% Similarity=0.346 Sum_probs=19.7
Q ss_pred EEEEcCCCCCCCeEEEEeCCEEEEEEE
Q 043469 18 MTVEIPGVHVNDIRVEVDDRKLTVMAK 44 (104)
Q Consensus 18 i~v~lPG~~~~di~V~v~~~~L~I~~~ 44 (104)
+++..+.--.+.|.+++++++|.|.-+
T Consensus 44 V~i~~~~nl~~~i~~~v~~g~L~I~~~ 70 (243)
T 3ljy_A 44 VEVTVDQNLHPYVNIEVKDRVLTIAFK 70 (243)
T ss_dssp EEEEEEGGGGGGEEEEEETTEEEEEEC
T ss_pred EEEEECcchhceEEEEEECCEEEEEEc
Confidence 666655544578899999999999744
Done!